View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16541_low_4 (Length: 441)
Name: NF16541_low_4
Description: NF16541
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16541_low_4 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 262; Significance: 1e-146; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 19 - 337
Target Start/End: Complemental strand, 8601285 - 8600971
Alignment:
| Q |
19 |
tgtgggaataggcaagatattacaataacgaatgaaaagggaagactatcaaccgaagaaattgagagaatgatccaagaagctgagaatttcaaagatg |
118 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8601285 |
tgtgggaataggcaagaaattacaataacgaatgaaaagggaagactatcaaccgaagaaattgagagaatgatccaagaagctgagaatttcaaagatg |
8601186 |
T |
|
| Q |
119 |
aagacttgaagttcaagaataaagttaaagcaatgaatgatctggatgattatctttacaatatgagaaaagtaatgaaggatgatggtgttagttccat |
218 |
Q |
| |
|
||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
8601185 |
aagacatgaagttcaagaagaaagttaaagcaatgaatgatctggatgattatctttacactatgagaaaagtaatgaaggatgatagtgttagttccat |
8601086 |
T |
|
| Q |
219 |
gcttacttcaatagaaagaatgaagatcaactctgcaatgataaagggaaagaaattgattgatgaaaaacagcatcaagaagcatttatgtttgtggaa |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||| ||| |
|
|
| T |
8601085 |
gcttacttcaatagaaagaatgaagatcaactctgcaatgataaagggaatgaaattgattgatgaaaaacagcatcatgaagcatt----tttgaggac |
8600990 |
T |
|
| Q |
319 |
tttcagagggagcttgaga |
337 |
Q |
| |
|
|||| |||||||||||||| |
|
|
| T |
8600989 |
tttctgagggagcttgaga |
8600971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 32 - 403
Target Start/End: Complemental strand, 8609218 - 8608847
Alignment:
| Q |
32 |
aagatattacaataacgaatgaaaagggaagactatcaaccgaagaaattgagagaatgatccaagaagctgagaatttcaaagatgaagacttgaagtt |
131 |
Q |
| |
|
|||||||||| ||||| || ||||| || |||| ||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
8609218 |
aagatattactataacaaaggaaaatggtcgactttcaactgaagaaattgagagaatgattcaagaagctgagaatttcaaagaggaagacttgaagtt |
8609119 |
T |
|
| Q |
132 |
caagaataaagttaaagcaatgaatgatctggatgattatctttacaatatgagaaaagtaatgaaggatgatggtgttagttccatgcttacttcaata |
231 |
Q |
| |
|
|| || ||||||||||||||||||| | |||||||||| |||||||| ||| | |||||||||||||||| |||||| |||||||||||| || | |
|
|
| T |
8609118 |
taaaaagaaagttaaagcaatgaatgttttggatgattacctttacaacatgcggaaagtaatgaaggatgggagtgttacttccatgcttacctctact |
8609019 |
T |
|
| Q |
232 |
gaaagaatgaagatcaactctgcaatgataaagggaaagaaattgattgatgaaaaacagcatcaagaagcatttatgtttgtggaatttcagagggagc |
331 |
Q |
| |
|
|| | ||||||| |||| ||||||||||||| |||||||| ||||||||||| ||| |||| || ||| ||||| |||||||||| |||| || ||||| |
|
|
| T |
8609018 |
gacaaaatgaagctcaatgctgcaatgataaaaggaaagaatttgattgatgacaaagagcaacatgaaacatttgtgtttgtggactttctgaaggagc |
8608919 |
T |
|
| Q |
332 |
ttgagagcatatttgaatcatctttgaagaagatcaataaaggttactctgatgagtaaagtgattctgatt |
403 |
Q |
| |
|
|||||| ||||||||||| ||||||| ||||| ||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
8608918 |
ttgagaagatatttgaatctgctttgaacaagattaataaaggttactctgatgaggaaagtgattctgatt |
8608847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 19 - 413
Target Start/End: Original strand, 8383733 - 8384127
Alignment:
| Q |
19 |
tgtgggaataggcaagatattacaataacgaatgaaaagggaagactatcaaccgaagaaattgagagaatgatccaagaagctgagaatttcaaagatg |
118 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||||||||| ||||| ||||||| || ||||||||||||||||||||||| || ||||||||||| | || |
|
|
| T |
8383733 |
tgtgggaataagcaagatattacaataaagaatgaaaatggaagtttatcaactgatgaaattgagagaatgatccaagaggcagagaatttcaaggctg |
8383832 |
T |
|
| Q |
119 |
aagacttgaagttcaagaataaagttaaagcaatgaatgatctggatgattatctttacaatatgagaaaagtaatgaaggatgatggtgttagttccat |
218 |
Q |
| |
|
||||| ||||||| | ||| ||||||||||||||||||| | |||| |||||||||||||| ||||| ||||||||||| |||||| |||||| ||| || |
|
|
| T |
8383833 |
aagacatgaagtttatgaagaaagttaaagcaatgaatgctttggacgattatctttacaacatgaggaaagtaatgaaagatgatagtgttacttcaat |
8383932 |
T |
|
| Q |
219 |
gcttacttcaatagaaagaatgaagatcaactctgcaatgataaagggaaagaaattgattgatgaaaaacagcatcaagaagcatttatgtttgtggaa |
318 |
Q |
| |
|
||| | ||||||| | ||| |||||||| ||||| ||||| ||||| || | |||||||||| || |||| ||||| ||||| | |||||||| |
|
|
| T |
8383933 |
gctcaacccaatagacaaaataaagatcaattctgctatgatgaaggggaaaaggttgattgatggtaacaagcacaaagaaacatttgtatttgtggac |
8384032 |
T |
|
| Q |
319 |
tttcagagggagcttgagagcatatttgaatcatctttgaagaagatcaataaaggttactctgatgagtaaagtgattctgattcttattgatc |
413 |
Q |
| |
|
|||| || ||||||||||||||| |||||||| ||| || |||||| | | |||| |||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
8384033 |
tttctgatggagcttgagagcatctttgaatctgttttaaacaagatccaaattggttgctctgatgaggaaagtgattctgattcttagtgatc |
8384127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 37 - 406
Target Start/End: Complemental strand, 8544929 - 8544560
Alignment:
| Q |
37 |
attacaataacgaatgaaaagggaagactatcaaccgaagaaattgagagaatgatccaagaagctgagaatttcaaagatgaagacttgaagttcaaga |
136 |
Q |
| |
|
||||||||||| | |||||| |||||| |||||| ||||||||||||||||||||||| |||||||| |||||||| | | ||||| ||||||||| | |
|
|
| T |
8544929 |
attacaataactattgaaaatggaagattatcaagggaagaaattgagagaatgatccaggaagctgacaatttcaaggctcaagacatgaagttcagaa |
8544830 |
T |
|
| Q |
137 |
ataaagttaaagcaatgaatgatctggatgattatctttacaatatgagaaaagtaatgaaggatgatggtgttagttccatgcttacttcaatagaaag |
236 |
Q |
| |
|
| |||||| |||||| |||| | |||| |||||||||||||| |||| |||||||||||||||||| |||||| ||||| ||| | | |||| | |
|
|
| T |
8544829 |
aaaaagttgaagcaagaaatgctttggagtattatctttacaatgtgaggaaagtaatgaaggatgattgtgttaattccaagctcgcccctgtagacaa |
8544730 |
T |
|
| Q |
237 |
aatgaagatcaactctgcaatgataaagggaaagaaattgattgatgaaaaacagcatcaagaagcatttatgtttgtggaatttcagagggagcttgag |
336 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||| | ||||||||| | || || || |||| |||||| |||||||||| ||| || |||||||||| |
|
|
| T |
8544729 |
aatgaatatcaattctgcaatgataaagggaaaaagtttgattgataacaaccaacaggaagatgcatttgtgtttgtggactttttgaaggagcttgag |
8544630 |
T |
|
| Q |
337 |
agcatatttgaatcatctttgaagaagatcaataaaggttactctgatgagtaaagtgattctgattctt |
406 |
Q |
| |
|
||||| |||||||| || |||| |||||||| ||||||| ||||||| | ||||||||| ||||||| |
|
|
| T |
8544629 |
agcatctttgaatcttccatgaacaagatcaaccaaggttaatctgatggggaaagtgatttggattctt |
8544560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 37 - 407
Target Start/End: Complemental strand, 8569607 - 8569237
Alignment:
| Q |
37 |
attacaataacgaatgaaaagggaagactatcaaccgaagaaattgagagaatgatccaagaagctgagaatttcaaagatgaagacttgaagttcaaga |
136 |
Q |
| |
|
||||||||||| ||||| ||||||||| |||||| | | ||||||||||||||||||| ||||||||||||||||| | | ||||| |||||||||| | |
|
|
| T |
8569607 |
attacaataactaatgagaagggaagattatcaaggggacaaattgagagaatgatccaggaagctgagaatttcaaggctcaagacatgaagttcaaaa |
8569508 |
T |
|
| Q |
137 |
ataaagttaaagcaatgaatgatctggatgattatctttacaatatgagaaaagtaatgaaggatgatggtgttagttccatgcttacttcaatagaaag |
236 |
Q |
| |
|
| |||||| |||||| |||| | ||||||||||||||||||| | ||||||||||||||| | ||| || ||| || | ||| ||| | |||| | |
|
|
| T |
8569507 |
agaaagttgaagcaagaaatgctttggatgattatctttacaaagtaagaaaagtaatgaagaacgatagtactagctcaaagctcactcctgtagacaa |
8569408 |
T |
|
| Q |
237 |
aatgaagatcaactctgcaatgataaagggaaagaaattgattgatgaaaaacagcatcaagaagcatttatgtttgtggaatttcagagggagcttgag |
336 |
Q |
| |
|
| |||||||||||| ||||||| |||||||| | ||||||| ||| | ||||| |||| | ||| |||||||||| |||| || |||||||||| |
|
|
| T |
8569407 |
agagaagatcaactcagcaatgaccaagggaaaaagtttgattggtgatagccagcaagaagatacctttgtgtttgtggactttctgaaggagcttgag |
8569308 |
T |
|
| Q |
337 |
agcatatttgaatcatctttgaagaagatcaataaaggttactctgatgagtaaagtgattctgattctta |
407 |
Q |
| |
|
||||| |||||||| || |||| |||||||| |||||| ||||||||||| |||||||||| |||||||| |
|
|
| T |
8569307 |
agcatctttgaatctgctatgaacaagatcaacaaaggtgactctgatgagaaaagtgattcggattctta |
8569237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 36 - 374
Target Start/End: Complemental strand, 8580994 - 8580656
Alignment:
| Q |
36 |
tattacaataacgaatgaaaagggaagactatcaaccgaagaaattgagagaatgatccaagaagctgagaatttcaaagatgaagacttgaagttcaag |
135 |
Q |
| |
|
||||||||||||||||||||| |||||||| |||| || |||||||||| |||||| | ||||||| | ||| || | | ||||| || |||||||| |
|
|
| T |
8580994 |
tattacaataacgaatgaaaatggaagactttcaagagaggaaattgagaaaatgattttacaagctgaaatttttaaggctcaagacatggagttcaag |
8580895 |
T |
|
| Q |
136 |
aataaagttaaagcaatgaatgatctggatgattatctttacaatatgagaaaagtaatgaaggatgatggtgttagttccatgcttacttcaatagaaa |
235 |
Q |
| |
|
|| |||||||||||||| |||| | |||| |||||||||||||| |||| ||||||||| ||||| || |||||||||| | ||| || | |||| | |
|
|
| T |
8580894 |
aagaaagttaaagcaataaatgctttggacgattatctttacaaagtgaggaaagtaatggaggataattgtgttagttcaaagctcaccactgtagaca |
8580795 |
T |
|
| Q |
236 |
gaatgaagatcaactctgcaatgataaagggaaagaaattgattgatgaaaaacagcatcaagaagcatttatgtttgtggaatttcagagggagcttga |
335 |
Q |
| |
|
| ||||| || |||||||||||||||||||| | ||||||||| | || || || |||| |||||| |||||||||| |||| || ||||||||| |
|
|
| T |
8580794 |
aagaaaagattaattctgcaatgataaagggaaaaagtttgattgataacaaccaacaggaagatgcatttgtgtttgtggactttctgaaggagcttga |
8580695 |
T |
|
| Q |
336 |
gagcatatttgaatcatctttgaagaagatcaataaagg |
374 |
Q |
| |
|
|||||| |||||||| || |||| |||||||| ||||| |
|
|
| T |
8580694 |
gagcatctttgaatcttccatgaacaagatcaagaaagg |
8580656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 35 - 281
Target Start/End: Complemental strand, 8589936 - 8589690
Alignment:
| Q |
35 |
atattacaataacgaatgaaaagggaagactatcaaccgaagaaattgagagaatgatccaagaagctgagaatttcaaagatgaagacttgaagttcaa |
134 |
Q |
| |
|
||||||||||||| |||||||| |||||||| ||| |||||||||||||||||||||||| ||||||||| | ||||| | ||||||| ||||| |
|
|
| T |
8589936 |
atattacaataaccaatgaaaatggaagactgacaagcgaagaaattgagagaatgatccaggaagctgagcacttcaaggctgaagacatgaagcatgt |
8589837 |
T |
|
| Q |
135 |
gaataaagttaaagcaatgaatgatctggatgattatctttacaatatgagaaaagtaatgaaggatgatggtgttagttccatgcttacttcaatagaa |
234 |
Q |
| |
|
||| ||||||| ||||||||||| | | ||||||||||||||| | ||||| ||||||||||||||||| |||| ||||| ||||||||| | || |
|
|
| T |
8589836 |
gaagaaagttagagcaatgaatgctttagatgattatctttacgacatgaggaaagtaatgaaggatgacagtgtagcttccaagcttacttctgttgac |
8589737 |
T |
|
| Q |
235 |
agaatgaagatcaactctgcaatgataaagggaaagaaattgattga |
281 |
Q |
| |
|
| | ||| ||||| ||||||||||||||||| || ||||| ||||| |
|
|
| T |
8589736 |
aaagtgagaatcaattctgcaatgataaaggggaaaaaattaattga |
8589690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 32 - 201
Target Start/End: Original strand, 29582711 - 29582880
Alignment:
| Q |
32 |
aagatattacaataacgaatgaaaagggaagactatcaaccgaagaaattgagagaatgatccaagaagctgagaatttcaaagatgaagacttgaagtt |
131 |
Q |
| |
|
|||| ||||||||||| |||| ||| |||||| | ||||| ||||||||||||||||||||||||||||| ||||||||||| | |||||| ||||||| |
|
|
| T |
29582711 |
aagagattacaataacaaatgtaaatggaagattgtcaactgaagaaattgagagaatgatccaagaagcagagaatttcaaggttgaagatctgaagtt |
29582810 |
T |
|
| Q |
132 |
caagaataaagttaaagcaatgaatgatctggatgattatctttacaatatgagaaaagtaatgaaggat |
201 |
Q |
| |
|
| | | | || || ||||||||||| | |||| || ||||||||||| ||||| ||||||||| ||||| |
|
|
| T |
29582811 |
ccaaatgagagctagagcaatgaatgctttggacgactatctttacaaaatgagtaaagtaatggaggat |
29582880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 21 - 201
Target Start/End: Complemental strand, 8537348 - 8537168
Alignment:
| Q |
21 |
tgggaataggcaagatattacaataacgaatgaaaagggaagactatcaaccgaagaaattgagagaatgatccaagaagctgagaatttcaaagatgaa |
120 |
Q |
| |
|
|||||||| | |||||||||| ||||| ||||||| |||||| ||||||| || |||||| ||||||| || |||||||||||||||||||||| ||| |
|
|
| T |
8537348 |
tgggaataagaaagatattaccataactaatgaaattggaagattatcaactgatgaaattaagagaataattcaagaagctgagaatttcaaagcagaa |
8537249 |
T |
|
| Q |
121 |
gacttgaagttcaagaataaagttaaagcaatgaatgatctggatgattatctttacaatatgagaaaagtaatgaaggat |
201 |
Q |
| |
|
||| | ||||||||||| ||| | | ||||| |||| | ||||||| ||||| |||||| ||| ||||| ||||||||| |
|
|
| T |
8537248 |
gacataaagttcaagaagaaatctgaggcaataaatgctttggatgactatctctacaatgtgaagaaagttatgaaggat |
8537168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 32 - 358
Target Start/End: Original strand, 7878600 - 7878926
Alignment:
| Q |
32 |
aagatattacaataacgaatgaaaagggaagactatcaaccgaagaaattgagagaatgatccaagaagctgagaatttcaaagatgaagacttgaagtt |
131 |
Q |
| |
|
|||| |||||||| ||||||||||| ||||||||||||| |||||||||||||||| ||| ||||||||||| | ||||| ||||||| ||||||| |
|
|
| T |
7878600 |
aagaaattacaattacgaatgaaaatggaagactatcaagggaagaaattgagagaaagattaaagaagctgagtacttcaagtctgaagacatgaagtt |
7878699 |
T |
|
| Q |
132 |
caagaataaagttaaagcaatgaatgatctggatgattatctttacaatatgagaaaagtaatgaaggatgatggtgttagttccatgcttacttcaata |
231 |
Q |
| |
|
| | | || |||| |||| |||||| | |||| ||||| |||| | ||||| |||||||||||||||||| | |||| ||| | ||| ||| | | |
|
|
| T |
7878700 |
tatggagaaggttagagcagtgaatgctttggaggattacatttatagaatgaggaaagtaatgaaggatgatagcgttacttcaaagctcactcctgtt |
7878799 |
T |
|
| Q |
232 |
gaaagaatgaagatcaactctgcaatgataaagggaaagaaattgattgatgaaaaacagcatcaagaagcatttatgtttgtggaatttcagagggagc |
331 |
Q |
| |
|
|| | | || | ||||| |||||||| ||||||||| | || || |||||||| || ||| | | || | || ||||||| || |||| |||||||| |
|
|
| T |
7878800 |
gagaaattggaaatcaattctgcaattataaagggagaaaatttcattgatgacaagcagaaatatgagacgcttgtgtttgtcgactttctgagggagc |
7878899 |
T |
|
| Q |
332 |
ttgagagcatatttgaatcatctttga |
358 |
Q |
| |
|
||||||||| || ||||||| |||||| |
|
|
| T |
7878900 |
ttgagagcacatgtgaatcagctttga |
7878926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 61 - 215
Target Start/End: Complemental strand, 8575571 - 8575417
Alignment:
| Q |
61 |
agactatcaaccgaagaaattgagagaatgatccaagaagctgagaatttcaaagatgaagacttgaagttcaagaataaagttaaagcaatgaatgatc |
160 |
Q |
| |
|
|||||||| || ||||||||| ||||||||| ||||||||||| | |||||| | | ||||| || |||||||||| ||||||| |||||| |||| |
|
|
| T |
8575571 |
agactatcgactcaagaaattgcgagaatgattcaagaagctgaaattttcaaggctcaagacatggagttcaagaagaaagttacagcaataaatgcat |
8575472 |
T |
|
| Q |
161 |
tggatgattatctttacaatatgagaaaagtaatgaaggatgatggtgttagttc |
215 |
Q |
| |
|
|||| ||||||||| ||||| ||| ||| |||||||||||||||||||| |||| |
|
|
| T |
8575471 |
tggacgattatcttcacaatgcgaggaaattaatgaaggatgatggtgttggttc |
8575417 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 40 - 221
Target Start/End: Original strand, 29578550 - 29578731
Alignment:
| Q |
40 |
acaataacgaatgaaaagggaagactatcaaccgaagaaattgagagaatgatccaagaagctgagaatttcaaagatgaagacttgaag-ttcaagaat |
138 |
Q |
| |
|
|||||||| ||||| || ||||||| ||||| ||||||||||| |||||||||||||||||||||| ||||| | |||||| ||||| |||||| | |
|
|
| T |
29578550 |
acaataacaaatgataatagaagactttcaactcaagaaattgagcgaatgatccaagaagctgagaaattcaaggttgaagatatgaagtttcaag-ag |
29578648 |
T |
|
| Q |
139 |
aaagttaaagcaatgaatgatctggatgattatctttacaatatgagaaaagtaatgaaggatgatggtgttagttccatgct |
221 |
Q |
| |
|
|||| || ||| | |||| | |||| |||||||||||||| | ||| ||||||||| ||||| | |||||||||||||||| |
|
|
| T |
29578649 |
aaagctagagcggtaaatgctttggaagattatctttacaaaacgagtaaagtaatggaggataacagtgttagttccatgct |
29578731 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 8575305 - 8575202
Alignment:
| Q |
327 |
ggagcttgagagcatatttgaatcatctttgaagaagatcaataaaggttactctgatgagtaaagtgattctgattcttattgatcactttttagttat |
426 |
Q |
| |
|
||||||||||||||| |||||||| ||| ||| ||||| || ||||| |||||||||||| ||||||||| | |||| ||||| ||||||||||||| |
|
|
| T |
8575305 |
ggagcttgagagcatctttgaatcttctaagaacaagattaacaaaggctactctgatgaggaaagtgatt-gggttctagttgatgactttttagttat |
8575207 |
T |
|
| Q |
427 |
ttcat |
431 |
Q |
| |
|
||||| |
|
|
| T |
8575206 |
ttcat |
8575202 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 357 - 403
Target Start/End: Complemental strand, 8600972 - 8600926
Alignment:
| Q |
357 |
gaagaagatcaataaaggttactctgatgagtaaagtgattctgatt |
403 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
8600972 |
gaagaagaccaataaaggtttctctgatgagtaaagtgattctgatt |
8600926 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 125; Significance: 3e-64; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 32 - 412
Target Start/End: Complemental strand, 12527805 - 12527425
Alignment:
| Q |
32 |
aagatattacaataacgaatgaaaagggaagactatcaaccgaagaaattgagagaatgatccaagaagctgagaatttcaaagatgaagacttgaagtt |
131 |
Q |
| |
|
|||||||||||||||| |||||||| |||||| |||||| |||||||||| |||||||||||| ||||||||||||||||| | |||||| ||||||| |
|
|
| T |
12527805 |
aagatattacaataacaaatgaaaatggaagattatcaagtgaagaaattgggagaatgatccaggaagctgagaatttcaaggctgaagatatgaagtt |
12527706 |
T |
|
| Q |
132 |
caagaataaagttaaagcaatgaatgatctggatgattatctttacaatatgagaaaagtaatgaaggatgatggtgttagttccatgcttacttcaata |
231 |
Q |
| |
|
||| || |||||||||||||| |||| | ||||||| ||||||||| || |||| ||| | ||||||||| || |||||||||||||||| || | || |
|
|
| T |
12527705 |
caaaaagaaagttaaagcaatcaatgctttggatgactatctttaccatgtgaggaaaatcatgaaggataattgtgttagttccatgctgacacctgta |
12527606 |
T |
|
| Q |
232 |
gaaagaatgaagatcaactctgcaatgataaagggaaagaaattgattgatgaaaaacagcatcaagaagcatttatgtttgtggaatttcagagggagc |
331 |
Q |
| |
|
|| | ||| ||| | |||||||||||||||||||| | |||||||||| ||| |||| |||| ||||| ||||| |||| ||| || ||||| |
|
|
| T |
12527605 |
gacaaaattttgatagattctgcaatgataaagggaaaaagcttgattgatggaaacaagcaggaagatacatttgtgtttttggactttttgaaggagc |
12527506 |
T |
|
| Q |
332 |
ttgagagcatatttgaatcatctttgaagaagatcaataaaggttactctgatgagtaaagtgattctgattcttattgat |
412 |
Q |
| |
|
|||||||||| |||| ||| ||||||| |||||||| ||||||||||| | ||| ||||||||||||||||||| |||| |
|
|
| T |
12527505 |
ttgagagcatctttggatctgctttgaataagatcaacaaaggttactccggtgaagaaagtgattctgattcttaatgat |
12527425 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 33; Significance: 0.000000003; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 11195995 - 11195927
Alignment:
| Q |
55 |
aagggaagactatcaaccgaagaaattgagagaatgatccaagaagctgagaatttcaaagatgaagac |
123 |
Q |
| |
|
||||||||| | |||| || ||||||||||| |||||| ||||||||||||| | ||||||||||||| |
|
|
| T |
11195995 |
aagggaagattgtcaaaggaggaaattgagaggatgatcaaagaagctgagaagtacaaagatgaagac |
11195927 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 11275211 - 11275143
Alignment:
| Q |
55 |
aagggaagactatcaaccgaagaaattgagagaatgatccaagaagctgagaatttcaaagatgaagac |
123 |
Q |
| |
|
||||||||||| |||| || ||||||||||| |||||| | ||||||||||| | ||||||||||||| |
|
|
| T |
11275211 |
aagggaagactgtcaaaagaggaaattgagaggatgatcaatgaagctgagaagtacaaagatgaagac |
11275143 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 11132281 - 11132198
Alignment:
| Q |
40 |
acaataacgaatgaaaagggaagactatcaaccgaagaaattgagagaatgatccaagaagctgagaatttcaaagatgaagac |
123 |
Q |
| |
|
||||||| ||||| |||||||| || |||| ||||| |||||||| |||||| ||||||||||||| | ||| ||||||||| |
|
|
| T |
11132281 |
acaataagaaatgacaagggaaggctgtcaaaagaagagattgagaggatgatcgaagaagctgagaagtacaaggatgaagac |
11132198 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 11208655 - 11208581
Alignment:
| Q |
49 |
aatgaaaagggaagactatcaaccgaagaaattgagagaatgatccaagaagctgagaatttcaaagatgaagac |
123 |
Q |
| |
|
||||| ||||||||||| |||| || ||||||||||| |||||| ||||||||||| | ||||||||||||| |
|
|
| T |
11208655 |
aatgacaagggaagactgtcaaaggaggaaattgagaggatgatcagtgaagctgagaaatacaaagatgaagac |
11208581 |
T |
|
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