View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16544_high_5 (Length: 327)
Name: NF16544_high_5
Description: NF16544
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16544_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 43688182 - 43687874
Alignment:
| Q |
1 |
taggcccaaccacgatttctaagaatatgcttcatagattgtgtgtccctgcaacattttaccatctggctgaaccaacgggactaccctatgtgatttt |
100 |
Q |
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| T |
43688182 |
taggcccaaccacgatttctaagaatatgcttcatagattttgtgtccctacaacattttaccatctggctgaaccaacaggactaccctatgtgatttt |
43688083 |
T |
|
| Q |
101 |
tatttgcaattatccaggacttaacattacatcttcataaattcagcattctattgtacccnnnnnnnntctatgcatacattctaaacatatatggaac |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
43688082 |
tatttgcaattatccaggacttaacattacatcttcataaattcagcattctattgtacccaaaaaaaatctatgcatacattctaaacatatatggaac |
43687983 |
T |
|
| Q |
201 |
ctagagatcaaccaaagtatgaaaaagtcttcaaatttagtctaagaaaaaagagaggcaaaatataaggatacaaagcatcttcttcgaacttcttgaa |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
43687982 |
ctagagatcaaccaaagtatgaaaaagtcttcaaatttagtctaagaaaaaagggaggcaagatataaggatacaaagcatcttcttcgaacttcttgaa |
43687883 |
T |
|
| Q |
301 |
gccagaatc |
309 |
Q |
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||||||||| |
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| T |
43687882 |
gccagaatc |
43687874 |
T |
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