View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16544_low_1 (Length: 671)

Name: NF16544_low_1
Description: NF16544
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16544_low_1
NF16544_low_1
[»] scaffold0503 (2 HSPs)
scaffold0503 (265-655)||(10245-10634)
scaffold0503 (516-602)||(10209-10296)
[»] chr5 (58 HSPs)
chr5 (85-383)||(20832945-20833243)
chr5 (504-655)||(34938095-34938247)
chr5 (435-655)||(16836682-16836910)
chr5 (85-172)||(9731451-9731538)
chr5 (514-655)||(14343245-14343391)
chr5 (8-86)||(21204076-21204155)
chr5 (85-147)||(14342434-14342496)
chr5 (366-427)||(11582738-11582799)
chr5 (85-150)||(22111190-22111255)
chr5 (366-427)||(1221087-1221148)
chr5 (366-427)||(7424539-7424600)
chr5 (366-427)||(9732022-9732083)
chr5 (85-150)||(21108941-21109006)
chr5 (366-427)||(22367840-22367901)
chr5 (85-150)||(24226253-24226318)
chr5 (8-86)||(9731336-9731415)
chr5 (516-600)||(11764902-11764988)
chr5 (366-425)||(21074845-21074904)
chr5 (366-427)||(11210-11271)
chr5 (366-427)||(10779535-10779596)
chr5 (374-427)||(18779357-18779410)
chr5 (85-150)||(20313885-20313949)
chr5 (366-427)||(25425481-25425542)
chr5 (226-437)||(37982295-37982506)
chr5 (4-82)||(21109049-21109127)
chr5 (374-427)||(17473133-17473186)
chr5 (366-427)||(29191976-29192037)
chr5 (516-602)||(16836858-16836946)
chr5 (485-602)||(23235860-23235978)
chr5 (366-427)||(11341498-11341559)
chr5 (366-419)||(19498661-19498714)
chr5 (154-217)||(14342670-14342734)
chr5 (518-597)||(14343342-14343422)
chr5 (262-424)||(21615883-21616044)
chr5 (146-216)||(24226480-24226551)
chr5 (126-216)||(33150283-33150374)
chr5 (146-219)||(21108706-21108780)
chr5 (618-655)||(2030563-2030600)
chr5 (618-655)||(17908423-17908460)
chr5 (618-655)||(23985776-23985813)
chr5 (618-655)||(25003611-25003648)
chr5 (229-352)||(28901011-28901134)
chr5 (229-352)||(28937406-28937529)
chr5 (369-419)||(110341-110391)
chr5 (374-427)||(3672867-3672920)
chr5 (366-419)||(4201322-4201374)
chr5 (618-655)||(18225568-18225605)
chr5 (366-419)||(20615482-20615534)
chr5 (366-419)||(21234762-21234814)
chr5 (325-410)||(23492930-23493014)
chr5 (366-419)||(25901682-25901734)
chr5 (366-419)||(37051854-37051906)
chr5 (504-587)||(2030542-2030625)
chr5 (4-44)||(8952619-8952659)
chr5 (148-200)||(20313669-20313721)
chr5 (4-44)||(22357525-22357565)
chr5 (366-426)||(27185070-27185129)
chr5 (4-44)||(40726121-40726161)
[»] scaffold0700 (2 HSPs)
scaffold0700 (415-655)||(1224-1465)
scaffold0700 (518-602)||(1188-1273)
[»] chr3 (64 HSPs)
chr3 (85-348)||(13327508-13327771)
chr3 (90-270)||(51962109-51962289)
chr3 (489-655)||(31413676-31413842)
chr3 (85-273)||(11883211-11883399)
chr3 (504-654)||(54039952-54040103)
chr3 (504-654)||(54049239-54049390)
chr3 (229-427)||(33369952-33370151)
chr3 (1-87)||(13327385-13327472)
chr3 (232-437)||(9591855-9592051)
chr3 (85-172)||(18910094-18910181)
chr3 (85-172)||(53770065-53770152)
chr3 (178-266)||(17937516-17937604)
chr3 (580-655)||(11637144-11637219)
chr3 (85-172)||(16260486-16260573)
chr3 (8-86)||(18910218-18910297)
chr3 (8-86)||(51961988-51962067)
chr3 (8-86)||(53770189-53770268)
chr3 (85-150)||(8604056-8604121)
chr3 (246-410)||(34558780-34558943)
chr3 (146-266)||(18738885-18739004)
chr3 (366-428)||(17957571-17957633)
chr3 (366-427)||(18909548-18909609)
chr3 (366-427)||(53769519-53769580)
chr3 (415-602)||(11637108-11637309)
chr3 (519-601)||(8603295-8603378)
chr3 (92-150)||(11823472-11823530)
chr3 (366-427)||(2450565-2450626)
chr3 (366-427)||(7852669-7852730)
chr3 (366-427)||(22273903-22273964)
chr3 (121-244)||(8603795-8603919)
chr3 (146-308)||(15549510-15549674)
chr3 (8-86)||(16260610-16260689)
chr3 (126-240)||(40040102-40040217)
chr3 (4-85)||(8604160-8604241)
chr3 (366-427)||(16259902-16259963)
chr3 (85-150)||(17937798-17937863)
chr3 (366-427)||(33340704-33340765)
chr3 (516-590)||(54040053-54040128)
chr3 (516-590)||(54049340-54049415)
chr3 (88-150)||(8631015-8631077)
chr3 (258-352)||(14079530-14079623)
chr3 (85-150)||(18739167-18739232)
chr3 (4-43)||(29172431-29172470)
chr3 (126-240)||(37917353-37917468)
chr3 (232-409)||(48420558-48420735)
chr3 (618-655)||(12903256-12903293)
chr3 (366-427)||(12951915-12951976)
chr3 (618-655)||(51962619-51962656)
chr3 (619-655)||(10903081-10903117)
chr3 (232-308)||(15516727-15516803)
chr3 (504-590)||(12903231-12903317)
chr3 (6-44)||(23395640-23395678)
chr3 (146-219)||(25104972-25105046)
chr3 (618-655)||(9304125-9304162)
chr3 (11-88)||(11883099-11883176)
chr3 (83-144)||(12774147-12774208)
chr3 (366-419)||(16745408-16745460)
chr3 (4-44)||(13667666-13667706)
chr3 (8-44)||(15517038-15517074)
chr3 (4-44)||(16728731-16728771)
chr3 (4-44)||(17548114-17548154)
chr3 (4-44)||(20417523-20417563)
chr3 (4-44)||(22147339-22147379)
chr3 (4-44)||(37642078-37642118)
[»] scaffold0165 (4 HSPs)
scaffold0165 (415-655)||(28741-28982)
scaffold0165 (485-655)||(20757-20928)
scaffold0165 (516-602)||(20721-20808)
scaffold0165 (516-602)||(28705-28792)
[»] chr1 (28 HSPs)
chr1 (440-655)||(18164811-18165027)
chr1 (230-437)||(21194025-21194233)
chr1 (258-419)||(22144514-22144675)
chr1 (232-429)||(8539054-8539252)
chr1 (232-429)||(8604293-8604491)
chr1 (85-172)||(20825894-20825981)
chr1 (232-427)||(27673710-27673905)
chr1 (8-86)||(20825778-20825857)
chr1 (366-427)||(20826466-20826527)
chr1 (366-427)||(41393310-41393371)
chr1 (86-150)||(76730-76794)
chr1 (518-602)||(18164775-18164860)
chr1 (246-424)||(5769299-5769479)
chr1 (415-495)||(18165008-18165088)
chr1 (504-582)||(20252826-20252905)
chr1 (283-425)||(37235126-37235267)
chr1 (162-215)||(9785137-9785190)
chr1 (85-150)||(52400476-52400541)
chr1 (146-217)||(76957-77029)
chr1 (246-352)||(17607898-17608004)
chr1 (9-79)||(20053782-20053852)
chr1 (229-352)||(16655458-16655581)
chr1 (619-655)||(20192835-20192871)
chr1 (619-655)||(25093487-25093523)
chr1 (226-425)||(5471490-5471689)
chr1 (4-44)||(13528357-13528397)
chr1 (4-44)||(51476421-51476461)
chr1 (4-44)||(52983590-52983630)
[»] chr2 (60 HSPs)
chr2 (85-427)||(19658823-19659164)
chr2 (415-655)||(16294037-16294278)
chr2 (516-655)||(22331306-22331446)
chr2 (504-655)||(22255048-22255200)
chr2 (507-655)||(42179779-42179928)
chr2 (504-655)||(7513421-7513573)
chr2 (516-651)||(22331399-22331535)
chr2 (85-172)||(8942948-8943035)
chr2 (85-172)||(12636935-12637022)
chr2 (85-172)||(12642689-12642776)
chr2 (8-86)||(21275075-21275154)
chr2 (85-172)||(42179028-42179115)
chr2 (86-150)||(19434246-19434310)
chr2 (8-88)||(19659199-19659275)
chr2 (85-172)||(21275191-21275278)
chr2 (85-166)||(3799670-3799751)
chr2 (288-437)||(19665530-19665678)
chr2 (85-150)||(43642150-43642215)
chr2 (8-86)||(3799555-3799634)
chr2 (8-86)||(42178912-42178991)
chr2 (366-427)||(12637401-12637462)
chr2 (366-427)||(12643261-12643322)
chr2 (366-427)||(21275763-21275824)
chr2 (85-146)||(22577365-22577426)
chr2 (8-86)||(8943071-8943150)
chr2 (366-427)||(21140735-21140796)
chr2 (366-427)||(24967159-24967220)
chr2 (85-150)||(29113631-29113696)
chr2 (232-410)||(66443-66621)
chr2 (8-86)||(12636820-12636899)
chr2 (8-86)||(12642574-12642653)
chr2 (516-602)||(16294227-16294314)
chr2 (92-150)||(19667862-19667920)
chr2 (378-427)||(19888028-19888077)
chr2 (366-426)||(8942509-8942569)
chr2 (4-82)||(45618234-45618312)
chr2 (366-427)||(12726913-12726974)
chr2 (232-352)||(24088470-24088591)
chr2 (366-427)||(34823058-34823119)
chr2 (146-217)||(22331918-22331990)
chr2 (516-602)||(22331270-22331357)
chr2 (516-590)||(42179877-42179952)
chr2 (146-200)||(7320557-7320611)
chr2 (618-655)||(17203292-17203329)
chr2 (618-655)||(28032497-28032534)
chr2 (618-655)||(32464625-32464662)
chr2 (366-426)||(24827805-24827865)
chr2 (619-655)||(25593799-25593835)
chr2 (527-590)||(32464601-32464665)
chr2 (154-216)||(19434481-19434544)
chr2 (4-43)||(23822577-23822616)
chr2 (4-43)||(23831656-23831695)
chr2 (154-219)||(24840996-24841062)
chr2 (147-216)||(43641916-43641986)
chr2 (366-419)||(3800350-3800402)
chr2 (366-419)||(14907675-14907727)
chr2 (366-419)||(20013990-20014042)
chr2 (366-419)||(23819047-23819099)
chr2 (4-44)||(6477859-6477899)
chr2 (8-44)||(24088199-24088235)
[»] chr6 (58 HSPs)
chr6 (435-655)||(19671119-19671340)
chr6 (452-655)||(31468869-31469073)
chr6 (429-655)||(940462-940689)
chr6 (516-655)||(17084743-17084883)
chr6 (504-655)||(19627974-19628126)
chr6 (504-655)||(35010682-35010834)
chr6 (520-651)||(17084658-17084790)
chr6 (518-655)||(22594886-22595024)
chr6 (8-172)||(15735759-15735930)
chr6 (85-172)||(16230993-16231080)
chr6 (8-86)||(16231117-16231196)
chr6 (85-172)||(18003636-18003723)
chr6 (232-437)||(22847000-22847206)
chr6 (85-150)||(23976894-23976959)
chr6 (9-85)||(23976996-23977073)
chr6 (85-172)||(13621777-13621864)
chr6 (366-427)||(16230447-16230508)
chr6 (366-427)||(18004209-18004270)
chr6 (85-147)||(25650285-25650347)
chr6 (366-427)||(13622349-13622410)
chr6 (366-427)||(15736417-15736478)
chr6 (85-150)||(23221135-23221200)
chr6 (366-427)||(23976434-23976495)
chr6 (366-427)||(25174419-25174480)
chr6 (366-427)||(27655323-27655384)
chr6 (258-410)||(35137122-35137272)
chr6 (8-86)||(13621661-13621740)
chr6 (516-602)||(17084832-17084919)
chr6 (8-86)||(18003521-18003600)
chr6 (1-88)||(25650382-25650469)
chr6 (366-427)||(14627846-14627907)
chr6 (516-602)||(940638-940725)
chr6 (516-602)||(19671083-19671170)
chr6 (146-219)||(17857429-17857503)
chr6 (366-427)||(16827112-16827173)
chr6 (415-500)||(17014926-17015011)
chr6 (366-427)||(18824997-18825058)
chr6 (92-144)||(10974097-10974149)
chr6 (366-426)||(18843057-18843117)
chr6 (146-217)||(23220900-23220972)
chr6 (246-329)||(25650110-25650194)
chr6 (246-424)||(34965813-34965993)
chr6 (516-590)||(35010783-35010858)
chr6 (613-655)||(14151209-14151251)
chr6 (293-426)||(19853079-19853212)
chr6 (126-219)||(26505944-26506037)
chr6 (366-419)||(4989770-4989823)
chr6 (503-601)||(14151173-14151273)
chr6 (258-410)||(33323659-33323809)
chr6 (92-147)||(5485357-5485412)
chr6 (178-219)||(4172635-4172677)
chr6 (178-219)||(4228244-4228286)
chr6 (250-312)||(22363321-22363383)
chr6 (526-602)||(22594983-22595060)
chr6 (618-655)||(27739751-27739788)
chr6 (366-419)||(33315819-33315871)
chr6 (4-44)||(5110338-5110378)
chr6 (258-306)||(29161456-29161504)
[»] chr4 (59 HSPs)
chr4 (415-655)||(13448333-13448574)
chr4 (485-655)||(40902079-40902250)
chr4 (516-655)||(41918176-41918316)
chr4 (415-602)||(7965982-7966170)
chr4 (504-655)||(19698978-19699130)
chr4 (504-655)||(19709563-19709715)
chr4 (259-427)||(7187046-7187215)
chr4 (229-427)||(15014369-15014568)
chr4 (504-655)||(55378142-55378292)
chr4 (85-172)||(7133113-7133200)
chr4 (85-172)||(15273423-15273510)
chr4 (85-172)||(19999825-19999912)
chr4 (550-651)||(41918122-41918223)
chr4 (8-86)||(7132997-7133076)
chr4 (8-86)||(15273307-15273386)
chr4 (366-427)||(15273996-15274057)
chr4 (366-427)||(15288246-15288307)
chr4 (366-427)||(15295356-15295417)
chr4 (9-70)||(19999965-20000026)
chr4 (516-601)||(14570015-14570101)
chr4 (246-418)||(18275721-18275892)
chr4 (366-427)||(19999386-19999447)
chr4 (518-602)||(41918267-41918352)
chr4 (85-145)||(17866226-17866286)
chr4 (375-427)||(18247047-18247099)
chr4 (608-655)||(7966087-7966134)
chr4 (485-602)||(13595480-13595599)
chr4 (85-150)||(10238214-10238279)
chr4 (366-427)||(15212203-15212264)
chr4 (517-601)||(40902200-40902285)
chr4 (366-427)||(8373214-8373275)
chr4 (481-593)||(19623473-19623586)
chr4 (229-427)||(41257452-41257651)
chr4 (516-602)||(13448523-13448610)
chr4 (4-82)||(26922112-26922190)
chr4 (366-427)||(15043803-15043864)
chr4 (366-427)||(15110560-15110621)
chr4 (366-427)||(18110089-18110150)
chr4 (366-427)||(22355801-22355861)
chr4 (366-426)||(9294385-9294445)
chr4 (619-655)||(12346693-12346729)
chr4 (232-308)||(43282475-43282551)
chr4 (608-655)||(14570050-14570097)
chr4 (146-219)||(10238441-10238515)
chr4 (85-135)||(12335492-12335542)
chr4 (621-655)||(22737298-22737332)
chr4 (8-70)||(30233536-30233598)
chr4 (154-219)||(54364475-54364541)
chr4 (366-419)||(10487538-10487590)
chr4 (366-419)||(16329161-16329213)
chr4 (366-419)||(26678902-26678954)
chr4 (4-44)||(4615633-4615673)
chr4 (304-427)||(8373322-8373441)
chr4 (146-217)||(12134647-12134719)
chr4 (619-655)||(12336020-12336056)
chr4 (4-44)||(14933008-14933048)
chr4 (4-44)||(15371481-15371521)
chr4 (4-44)||(15373762-15373802)
chr4 (4-44)||(27028180-27028220)
[»] scaffold1068 (2 HSPs)
scaffold1068 (452-655)||(1884-2088)
scaffold1068 (518-602)||(1848-1933)
[»] scaffold0133 (3 HSPs)
scaffold0133 (485-655)||(3072-3243)
scaffold0133 (415-500)||(24221-24306)
scaffold0133 (516-602)||(3192-3279)
[»] scaffold0148 (2 HSPs)
scaffold0148 (415-655)||(36533-36771)
scaffold0148 (516-598)||(36501-36584)
[»] chr8 (52 HSPs)
chr8 (485-655)||(45468630-45468799)
chr8 (504-655)||(17500658-17500810)
chr8 (226-425)||(33612157-33612356)
chr8 (504-655)||(41508466-41508618)
chr8 (504-655)||(18610904-18611056)
chr8 (516-655)||(20177424-20177564)
chr8 (516-655)||(20222151-20222291)
chr8 (504-655)||(18617698-18617850)
chr8 (537-655)||(18262829-18262948)
chr8 (516-651)||(20177335-20177471)
chr8 (516-651)||(20222062-20222198)
chr8 (248-427)||(23227134-23227313)
chr8 (85-172)||(3432349-3432436)
chr8 (85-172)||(16040024-16040111)
chr8 (229-427)||(23148767-23148962)
chr8 (246-427)||(37654752-37654934)
chr8 (366-427)||(22908720-22908781)
chr8 (85-150)||(25757422-25757487)
chr8 (85-150)||(45559886-45559951)
chr8 (4-88)||(5080535-5080619)
chr8 (8-86)||(3432234-3432313)
chr8 (516-602)||(17500622-17500709)
chr8 (485-602)||(20708392-20708510)
chr8 (366-427)||(6775467-6775528)
chr8 (518-602)||(18262899-18262984)
chr8 (518-602)||(20177515-20177600)
chr8 (518-602)||(20222242-20222327)
chr8 (366-427)||(28836454-28836515)
chr8 (85-150)||(19332292-19332357)
chr8 (85-146)||(25295406-25295467)
chr8 (488-602)||(16000760-16000876)
chr8 (85-148)||(22313102-22313165)
chr8 (146-219)||(19332511-19332585)
chr8 (366-427)||(24107822-24107883)
chr8 (92-148)||(24383847-24383903)
chr8 (232-410)||(15932236-15932413)
chr8 (126-216)||(34012941-34013032)
chr8 (516-590)||(41508567-41508642)
chr8 (146-279)||(45560113-45560247)
chr8 (146-218)||(11543711-11543784)
chr8 (366-427)||(17151491-17151552)
chr8 (15-86)||(16039915-16039987)
chr8 (4-44)||(22584301-22584341)
chr8 (528-602)||(45468760-45468835)
chr8 (146-200)||(25295186-25295240)
chr8 (146-200)||(25757206-25757260)
chr8 (366-419)||(5237063-5237115)
chr8 (366-419)||(24662483-24662535)
chr8 (366-419)||(43684522-43684574)
chr8 (608-655)||(16000796-16000844)
chr8 (236-312)||(17284248-17284324)
chr8 (4-44)||(23889169-23889209)
[»] chr7 (68 HSPs)
chr7 (485-655)||(14276351-14276523)
chr7 (90-237)||(25123417-25123564)
chr7 (516-655)||(44306663-44306803)
chr7 (516-655)||(39293133-39293273)
chr7 (516-655)||(14252720-14252860)
chr7 (504-655)||(7285836-7285986)
chr7 (516-651)||(44306574-44306710)
chr7 (85-172)||(370189-370276)
chr7 (8-86)||(25123606-25123685)
chr7 (8-85)||(14251850-14251928)
chr7 (86-150)||(8564304-8564368)
chr7 (8-86)||(2028091-2028170)
chr7 (85-172)||(14251965-14252052)
chr7 (85-172)||(15926669-15926756)
chr7 (8-86)||(15926792-15926871)
chr7 (9-85)||(370313-370390)
chr7 (85-172)||(2191319-2191406)
chr7 (232-437)||(9057744-9057948)
chr7 (366-427)||(15952335-15952396)
chr7 (366-427)||(16480175-16480236)
chr7 (85-150)||(21675626-21675691)
chr7 (366-427)||(26010430-26010491)
chr7 (518-602)||(39293224-39293309)
chr7 (85-150)||(46473356-46473421)
chr7 (246-418)||(48354246-48354417)
chr7 (429-602)||(28389039-28389225)
chr7 (485-602)||(18081069-18081187)
chr7 (366-427)||(7291717-7291778)
chr7 (85-150)||(14275627-14275692)
chr7 (366-427)||(16417328-16417389)
chr7 (518-602)||(44306754-44306839)
chr7 (86-150)||(15978774-15978838)
chr7 (86-150)||(19382596-19382660)
chr7 (232-418)||(9610147-9610332)
chr7 (485-602)||(9641646-9641765)
chr7 (232-418)||(9837719-9837904)
chr7 (592-655)||(28389075-28389138)
chr7 (374-427)||(15926228-15926281)
chr7 (89-165)||(2027974-2028050)
chr7 (146-217)||(8564521-8564593)
chr7 (86-150)||(21538906-21538970)
chr7 (8-86)||(2191203-2191282)
chr7 (85-148)||(18080434-18080497)
chr7 (283-424)||(9322187-9322329)
chr7 (146-219)||(15979000-15979074)
chr7 (85-131)||(39292454-39292500)
chr7 (366-419)||(2027429-2027482)
chr7 (366-427)||(2191935-2191996)
chr7 (246-418)||(16921040-16921211)
chr7 (146-219)||(21539133-21539207)
chr7 (526-601)||(3136092-3136168)
chr7 (146-219)||(3193082-3193157)
chr7 (4-44)||(11054075-11054115)
chr7 (366-437)||(20584109-20584180)
chr7 (96-150)||(4597495-4597549)
chr7 (536-601)||(12246596-12246662)
chr7 (8-70)||(26071262-26071324)
chr7 (8-70)||(26095049-26095111)
chr7 (366-419)||(11514993-11515045)
chr7 (366-419)||(13912353-13912405)
chr7 (366-419)||(15442799-15442851)
chr7 (146-242)||(21675854-21675951)
chr7 (366-419)||(30263364-30263416)
chr7 (622-654)||(3136128-3136160)
chr7 (4-44)||(19486545-19486585)
chr7 (146-217)||(28719653-28719724)
chr7 (4-44)||(37784937-37784977)
chr7 (146-217)||(46473121-46473193)
[»] scaffold0020 (2 HSPs)
scaffold0020 (460-655)||(104584-104778)
scaffold0020 (526-602)||(104548-104625)
[»] scaffold0158 (1 HSPs)
scaffold0158 (504-655)||(23512-23664)
[»] scaffold0175 (2 HSPs)
scaffold0175 (226-427)||(6235-6436)
scaffold0175 (4-44)||(18278-18318)
[»] scaffold0138 (5 HSPs)
scaffold0138 (504-655)||(27965-28121)
scaffold0138 (504-655)||(39961-40117)
scaffold0138 (516-582)||(27949-28016)
scaffold0138 (516-582)||(39945-40012)
scaffold0138 (366-416)||(23659-23709)
[»] scaffold0456 (1 HSPs)
scaffold0456 (258-511)||(12069-12307)
[»] scaffold0335 (1 HSPs)
scaffold0335 (518-655)||(9433-9571)
[»] scaffold0409 (4 HSPs)
scaffold0409 (555-655)||(2572-2672)
scaffold0409 (555-655)||(10827-10927)
scaffold0409 (519-602)||(2624-2708)
scaffold0409 (519-602)||(10879-10963)
[»] scaffold0080 (2 HSPs)
scaffold0080 (429-573)||(44281-44426)
scaffold0080 (245-437)||(24717-24910)
[»] scaffold0251 (5 HSPs)
scaffold0251 (85-172)||(14530-14617)
scaffold0251 (8-86)||(14414-14493)
scaffold0251 (366-427)||(15102-15163)
scaffold0251 (8-86)||(22460-22539)
scaffold0251 (85-135)||(22576-22626)
[»] scaffold0303 (2 HSPs)
scaffold0303 (85-172)||(1141-1228)
scaffold0303 (8-86)||(1026-1105)
[»] scaffold0231 (2 HSPs)
scaffold0231 (85-150)||(13634-13699)
scaffold0231 (146-219)||(13862-13935)
[»] scaffold0183 (2 HSPs)
scaffold0183 (85-150)||(10247-10312)
scaffold0183 (154-219)||(10010-10076)
[»] scaffold0090 (4 HSPs)
scaffold0090 (85-150)||(35655-35720)
scaffold0090 (85-150)||(4044-4109)
scaffold0090 (516-655)||(36179-36324)
scaffold0090 (516-602)||(36272-36360)
[»] scaffold0009 (2 HSPs)
scaffold0009 (435-602)||(98387-98556)
scaffold0009 (228-418)||(68396-68585)
[»] scaffold0174 (2 HSPs)
scaffold0174 (86-150)||(20793-20857)
scaffold0174 (8-80)||(15756-15828)
[»] scaffold0786 (2 HSPs)
scaffold0786 (232-427)||(564-757)
scaffold0786 (232-427)||(5619-5812)
[»] scaffold0390 (1 HSPs)
scaffold0390 (232-427)||(4152-4345)
[»] scaffold0037 (2 HSPs)
scaffold0037 (85-152)||(94020-94087)
scaffold0037 (8-83)||(94127-94203)
[»] scaffold0025 (1 HSPs)
scaffold0025 (226-392)||(84492-84659)
[»] scaffold0004 (5 HSPs)
scaffold0004 (8-86)||(187870-187949)
scaffold0004 (89-172)||(187990-188073)
scaffold0004 (8-80)||(75139-75211)
scaffold0004 (251-346)||(85368-85465)
scaffold0004 (228-308)||(26558-26638)
[»] scaffold0215 (1 HSPs)
scaffold0215 (366-427)||(17328-17389)
[»] scaffold0047 (3 HSPs)
scaffold0047 (85-150)||(76406-76471)
scaffold0047 (4-70)||(76526-76592)
scaffold0047 (232-332)||(1202-1303)
[»] scaffold0032 (3 HSPs)
scaffold0032 (366-427)||(109319-109380)
scaffold0032 (283-416)||(105754-105887)
scaffold0032 (86-150)||(117123-117187)
[»] scaffold0028 (4 HSPs)
scaffold0028 (366-427)||(90122-90183)
scaffold0028 (266-427)||(78553-78712)
scaffold0028 (366-427)||(129246-129307)
scaffold0028 (13-82)||(38684-38753)
[»] scaffold0706 (1 HSPs)
scaffold0706 (8-83)||(7565-7641)
[»] scaffold0561 (1 HSPs)
scaffold0561 (485-602)||(4217-4336)
[»] scaffold0574 (1 HSPs)
scaffold0574 (8-70)||(10513-10575)
[»] scaffold0017 (2 HSPs)
scaffold0017 (126-219)||(11777-11871)
scaffold0017 (85-150)||(12014-12077)
[»] scaffold0005 (2 HSPs)
scaffold0005 (516-601)||(247275-247361)
scaffold0005 (608-655)||(247279-247326)
[»] scaffold0601 (1 HSPs)
scaffold0601 (85-150)||(2008-2073)
[»] scaffold0124 (1 HSPs)
scaffold0124 (366-427)||(2814-2875)
[»] scaffold0078 (1 HSPs)
scaffold0078 (366-427)||(38569-38630)
[»] scaffold0023 (2 HSPs)
scaffold0023 (366-427)||(155593-155654)
scaffold0023 (618-651)||(57929-57962)
[»] scaffold0003 (1 HSPs)
scaffold0003 (366-427)||(6040-6101)
[»] scaffold0151 (1 HSPs)
scaffold0151 (232-427)||(23567-23762)
[»] scaffold0043 (1 HSPs)
scaffold0043 (92-150)||(14695-14753)
[»] scaffold0310 (1 HSPs)
scaffold0310 (366-427)||(1505-1566)
[»] scaffold0193 (1 HSPs)
scaffold0193 (232-427)||(3579-3768)
[»] scaffold0031 (1 HSPs)
scaffold0031 (262-418)||(98293-98448)
[»] scaffold0010 (1 HSPs)
scaffold0010 (246-418)||(30000-30171)
[»] scaffold0261 (1 HSPs)
scaffold0261 (4-80)||(7025-7101)
[»] scaffold0042 (1 HSPs)
scaffold0042 (4-44)||(47133-47173)
[»] scaffold0305 (1 HSPs)
scaffold0305 (86-161)||(1780-1855)
[»] scaffold0686 (1 HSPs)
scaffold0686 (618-655)||(7423-7460)
[»] scaffold0412 (1 HSPs)
scaffold0412 (83-144)||(2435-2496)
[»] scaffold0132 (1 HSPs)
scaffold0132 (618-655)||(12543-12580)
[»] scaffold0022 (1 HSPs)
scaffold0022 (366-427)||(130765-130826)
[»] scaffold0016 (1 HSPs)
scaffold0016 (618-655)||(167626-167663)
[»] scaffold0012 (1 HSPs)
scaffold0012 (618-655)||(35233-35270)
[»] scaffold0001 (2 HSPs)
scaffold0001 (618-655)||(165850-165887)
scaffold0001 (504-587)||(165825-165908)
[»] scaffold1957 (1 HSPs)
scaffold1957 (8-44)||(456-492)
[»] scaffold1204 (1 HSPs)
scaffold1204 (146-217)||(1138-1210)
[»] scaffold0327 (1 HSPs)
scaffold0327 (361-416)||(4912-4967)
[»] scaffold0013 (1 HSPs)
scaffold0013 (146-216)||(8126-8196)
[»] scaffold0205 (1 HSPs)
scaffold0205 (146-219)||(7150-7224)
[»] scaffold1486 (1 HSPs)
scaffold1486 (618-651)||(1666-1699)
[»] scaffold0329 (1 HSPs)
scaffold0329 (618-655)||(1812-1849)
[»] scaffold0315 (1 HSPs)
scaffold0315 (374-427)||(17510-17563)
[»] scaffold0162 (1 HSPs)
scaffold0162 (618-655)||(9489-9526)
[»] scaffold0141 (2 HSPs)
scaffold0141 (366-419)||(21516-21568)
scaffold0141 (366-419)||(25771-25823)
[»] scaffold1276 (1 HSPs)
scaffold1276 (8-40)||(529-561)
[»] scaffold0429 (1 HSPs)
scaffold0429 (4-44)||(2557-2597)
[»] scaffold0331 (1 HSPs)
scaffold0331 (4-44)||(4137-4177)
[»] scaffold0273 (1 HSPs)
scaffold0273 (4-44)||(7065-7105)
[»] scaffold0107 (1 HSPs)
scaffold0107 (366-418)||(12342-12394)


Alignment Details
Target: scaffold0503 (Bit Score: 219; Significance: 1e-120; HSPs: 2)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 265 - 655
Target Start/End: Complemental strand, 10634 - 10245
Alignment:
Q  265 ttataatcttttgtgatcagccttatgtgactaaatgaagatgtatgatgacttgctagatgttgtataagatattgatcataagatggtgggttatctc 364  Q
    ||||||||||| ||||  |||||||||||||||||||||| ||| |||||| ||| ||||||||| ||| |||||| ||| | ||||| ||  || ||||    
T  10634 ttataatctttagtgactagccttatgtgactaaatgaagttgtgtgatgatttgttagatgttggataggatattaatcgtgagatgttgtattttctc 10535  T
Q  365 gttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatgttgatgatgaaatgttggtgggttcatatatgacatg 464  Q
     |||||||||||||||||| | | ||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||| || |||||||||||||    
T  10534 -ttacttgtaatatgagaaatatgtggaatggtgaaactatatgatgtagtcgatattgaatgttgatgatgaaatgttggtgagtgcatatatgacatg 10436  T
Q  465 tgatgatggactattagtggatgcatatatgctaattgtttggtgagattctggtgaattgtttgtgtgaacatatgtattgttgtgagatatatgttta 564  Q
    ||| ||||||||||||||| |||||| ||| |||||||||||||||| ||  |||||||||||||||||||||||||||||||| |||||||||||| ||    
T  10435 tgaggatggactattagtgaatgcatgtatactaattgtttggtgaggttgaggtgaattgtttgtgtgaacatatgtattgttatgagatatatgtcta 10336  T
Q  565 tacgtacatgactgatggtgacagattttatatccaatgtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
     || ||||||| |||||||||||||||||||||||||||| | ||||||||| | ||||||||||||||||||||||||||||||| ||||    
T  10335 cacatacatgattgatggtgacagattttatatccaatgtggtgaatggtttgtatgaacatatgcattgttgtcgagtcatatgtccatg 10245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 602
Target Start/End: Complemental strand, 10296 - 10209
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    |||||||| |||||| |||||||||| |||||||| |||  ||||||  || | | |||||||||||||||| || ||||||||||||    
T  10296 tggtgaatggtttgtatgaacatatgcattgttgtcgagtcatatgtccatgcattcatgactgatggtgacggactttatatccaat 10209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 163; Significance: 1e-86; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 85 - 383
Target Start/End: Original strand, 20832945 - 20833243
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgtttagatacttagttt 184  Q
    ||||||| |||||||||||||||||| ||||||||||||| |||||||||| | ||||||||||||||  | |||| ||||| ||||| |||||||||||    
T  20832945 aagtgaggtggcctatgagacgttgacgtatacactactgcactcatatgtgacttgtgtatatacatgatggaggtcctagggtttatatacttagttt 20833044  T
Q  185 tggttcaattgtctcattgttttaaagttgtaaaagggaagacggactttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcag 284  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||| ||| || ||||  ||    
T  20833045 tggttcaattgtctcattgttttaaagttgtaaaaggaaagacggactttatcggaaaatgttcttttaagccaattgtcttatgatcattcgtgactag 20833144  T
Q  285 ccttatgtgactaaatgaagatgtatgatgacttgctagatgttgtataagatattgatcataagatggtgggttatctcgttacttgtaatatgagaa 383  Q
    ||||||||| |||||||||||||| |||||| ||| || |||||| ||| |||||| ||||||||||| ||  || |||| ||||||||| | ||||||    
T  20833145 ccttatgtgtctaaatgaagatgtgtgatgaattgttaaatgttggatatgatatttatcataagatgatgtattttctctttacttgtattgtgagaa 20833243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 504 - 655
Target Start/End: Complemental strand, 34938247 - 34938095
Alignment:
Q  504 ttggtgagattctggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    ||||||||| | ||||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||||||||||||||||| |||||||||||||||    
T  34938247 ttggtgagaatatggtgaattgtttgtatgaacatatgtattgttgttgagatatatgtttatgcatacatgactgatggtgacggattttatatccaat 34938148  T
Q  603 gtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    || | || | |||| ||||||||||||||||||||| ||||||||||||||||    
T  34938147 gtggtgagttgtttgtgtgaacatatgcattgttgttgagtcatatgttcatg 34938095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 435 - 655
Target Start/End: Original strand, 16836682 - 16836910
Alignment:
Q  435 tgaaatgttggtgggttcatatatgacatgtgatgatggactattagtggatgcatatatgctaattgtttggtgagattctggtgaattgtttgtgtga 534  Q
    |||| |||||||| || |||||||| || || | | || | |||| ||| ||||||||||||||| ||||||||||||||  ||||||||| ||||||||    
T  16836682 tgaattgttggtgagtgcatatatgtcaagtaacggtgaattattggtgaatgcatatatgctaagtgtttggtgagattgcggtgaattggttgtgtga 16836781  T
Q  535 acatatgtattgttg-tgagatatatgtttatacgtacatgactgatggtgacagattt----tatatcc--aatgtagagaatggtttatgtgaacata 627  Q
    ||||||  ||||||| || || |||||| ||||| |||||||||||||||||  |||||    |||||||  ||||| | |||| |||| ||||||||||    
T  16836782 acatatacattgttgttgtgacatatgtgtatacatacatgactgatggtgatggattttatatatatccgaaatgtggtgaattgtttgtgtgaacata 16836881  T
Q  628 tgcatt-gttgtcgagtcatatgttcatg 655  Q
    |||||| ||||| ||||||||||||||||    
T  16836882 tgcattagttgttgagtcatatgttcatg 16836910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 9731451 - 9731538
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgttta 172  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||| || |||| ||||| |||||    
T  9731451 aagtgagttggcctatgaaacgttgatgtatacactactgcactcatatgtgatttgtgtatatacatggttgaggtcctagagttta 9731538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 514 - 655
Target Start/End: Original strand, 14343245 - 14343391
Alignment:
Q  514 tctggtgaattgtttgtgtgaacatatgtattgt-tgtgagatatatgtttatacgtacatgactgatggtgacagattttata----tccaatgtagag 608  Q
    |||||||||||||||||| ||||||||| ||||| | ||||| |||||||||| | |||||||||||||||||   ||||||||    |  ||||||| |    
T  14343245 tctggtgaattgtttgtgcgaacatatgcattgtatttgagacatatgtttatgcatacatgactgatggtgatgaattttatatatctgaaatgtagtg 14343344  T
Q  609 aatggtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||| |||| ||||||||||| ||||||||| ||||||||||||||||    
T  14343345 aattgtttgtgtgaacatatacattgttgttgagtcatatgttcatg 14343391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 21204155 - 21204076
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatgaa 86  Q
    |||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||| || |||||||||||||||    
T  21204155 catctagggatgtttttatggaagaaatagctttgtattaagggcttagtgagtccttgtgttttcttgactttaatgaa 21204076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 85 - 147
Target Start/End: Original strand, 14342434 - 14342496
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtata 147  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  14342434 aagtgagttggcctatgagacgttgatgtatacactactgcactcatatgtgatttgtgtata 14342496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 11582799 - 11582738
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  11582799 ttacttgtaatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 11582738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 22111255 - 22111190
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||    
T  22111255 aagtgagttggcctatgagacattgatgtatacactactgcactcatatgtgatttgtgtatatac 22111190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 1221087 - 1221148
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  1221087 ttacttggaatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 1221148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 7424600 - 7424539
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  7424600 ttacttggaatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 7424539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 9732022 - 9732083
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  9732022 ttacttggaatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 9732083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 21109006 - 21108941
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||| ||| ||||||||||    
T  21109006 aagtgagttggcctatgagacgttgatgtatacactactgcactcaaatgtgattggtgtatatac 21108941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 22367840 - 22367901
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  22367840 ttacttggaatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 22367901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 24226253 - 24226318
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||| |||| |||||||||    
T  24226253 aagtgagttggcctatgagacgttgatgtatacactactgcactgatatgtgatttttgtatatac 24226318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 9731336 - 9731415
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatgaa 86  Q
    |||||||||||||||||||| |||||||| ||| ||| |||||||||||||||||||| || || |||||||||||||||    
T  9731336 catctagggatgtttttatggaagaaatagcttcgtattaagggcttagtgagtccttttgttttcttgactttaatgaa 9731415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 516 - 600
Target Start/End: Original strand, 11764902 - 11764988
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttgt--gagatatatgtttatacgtacatgactgatggtgacagattttatatcca 600  Q
    |||||||||||||||||||||||||| ||||||||  |||| ||||||| || | | ||||||||||||||||| ||||||||||||    
T  11764902 tggtgaattgtttgtgtgaacatatgcattgttgttagagacatatgttcatgcattcatgactgatggtgacatattttatatcca 11764988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 366 - 425
Target Start/End: Original strand, 21074845 - 21074904
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaa 425  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  21074845 ttacttggaatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaa 21074904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 11271 - 11210
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  11271 ttacttgggatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 11210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 10779535 - 10779596
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||||||||||| |||||||    
T  10779535 ttacttggaatatgagaattatttggaatggtgaaactatatgatatagttgatgttgaatg 10779596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 374 - 427
Target Start/End: Original strand, 18779357 - 18779410
Alignment:
Q  374 aatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  18779357 aatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 18779410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 20313949 - 20313885
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    ||||||||||||| |||||||||||||||||||| ||||| |||||||||| ||||||||||||||    
T  20313949 aagtgagttggcc-atgagacgttgatgtatacattactgcactcatatgtgatttgtgtatatac 20313885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 25425542 - 25425481
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||||||||||| |||||||    
T  25425542 ttacttggaatatgagaattatttggaatggtgaaactatatgatatagttgatgttgaatg 25425481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 226 - 437
Target Start/End: Complemental strand, 37982506 - 37982295
Alignment:
Q  226 acggactttatcggaaaatg-ttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatga-tgacttgctag 323  Q
    ||||| ||||||| |||||| |||||||| || ||||||||||| | |||| ||||  |||||||| |||||||| ||||| || ||| ||| ||| ||     
T  37982506 acggattttatcg-aaaatgattcttttatgccaattatcttatgacctttcgtgactagccttatatgactaaaggaagaggtgtgaatgaattgttat 37982408  T
Q  324 atgttgtataagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattg 423  Q
    |||| | ||| |||||| ||||||||||| ||  |  |||| ||||||| |||||||||| |  ||||| || |||||||||||||| |||||||| |||    
T  37982407 atgtaggatatgatatttatcataagatgttgtatgttctc-ttacttggaatatgagaaataattggagtggtgaaactatatgatgtagttgatgttg 37982309  T
Q  424 aatgttgatgatga 437  Q
    |||| || ||||||    
T  37982308 aatgatgttgatga 37982295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 21109127 - 21109049
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtgttacttgactttaa 82  Q
    ||||||||||||| || ||||||||||||||||||||||||  |||||  |||||||| |||||||| |||||| ||||    
T  21109127 taaccatctaggggtgattttatgaaagaaataactttgtacaaagggtctagtgagttcttgtgttgcttgacattaa 21109049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 374 - 427
Target Start/End: Original strand, 17473133 - 17473186
Alignment:
Q  374 aatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    |||||||||||||||||||||| |||||||||||||||||||| || |||||||    
T  17473133 aatatgagaattgtttggaatggtgaaactatatgatatagttaatgttgaatg 17473186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 29191976 - 29192037
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    |||||||  |||||||||||||||||| || ||||||||||||||||||||||| |||||||    
T  29191976 ttacttgggatatgagaattgtttggagtggtgaaactatatgatatagttgatgttgaatg 29192037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 516 - 602
Target Start/End: Original strand, 16836858 - 16836946
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtatt-gttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    |||||||||||||||||||||||||| ||| ||||| |||  ||||||| || | | |||||||||||||||| |||||||||||||||    
T  16836858 tggtgaattgtttgtgtgaacatatgcattagttgttgagtcatatgttcatgcattcatgactgatggtgacggattttatatccaat 16836946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 485 - 602
Target Start/End: Original strand, 23235860 - 23235978
Alignment:
Q  485 atgcatatatgctaattgtttggtgagattctggtgaattgtttgtgtgaacatatgta-ttgtt-gtgagatatatgtttatacgtacatgactgatgg 582  Q
    |||| |||||||||| |||| | ||||||| |||||||||||||||||||||||||| | |||||  ||||  || |||| || | | ||||||||||||    
T  23235860 atgcgtatatgctaagtgtt-gatgagattgtggtgaattgtttgtgtgaacatatgcatttgttattgagtcatctgttcatgcattcatgactgatgg 23235958  T
Q  583 tgacagattttatatccaat 602  Q
    |||| |||||||||||||||    
T  23235959 tgacggattttatatccaat 23235978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 11341559 - 11341498
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||| || ||| |||| ||||||||||||||||||||||| |||||||    
T  11341559 ttacttggaatatgagaaatgcttgaaatggtgaaactatatgatatagttgatgttgaatg 11341498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 366 - 419
Target Start/End: Complemental strand, 19498714 - 19498661
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgat 419  Q
    ||||||| |||||||||||| | ||||||| |||||||||||||||||||||||    
T  19498714 ttacttggaatatgagaattatctggaatggtgaaactatatgatatagttgat 19498661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 217
Target Start/End: Original strand, 14342670 - 14342734
Alignment:
Q  154 gtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgtaa 217  Q
    ||||||||||||| |||||  ||||| ||||||||||||||||||| ||| ||||||||||||||    
T  14342670 gtcgaggccctagagtttatttacttggttttggttcaattgtctcaattattttaaagttgtaa 14342734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 597
Target Start/End: Original strand, 14343342 - 14343422
Alignment:
Q  518 gtgaattgtttgtgtgaacatatgtattgttg-tgagatatatgtttatacgtacatgactgatggtgacagattttatat 597  Q
    |||||||||||||||||||||||  ||||||| ||||  ||||||| || | | |||||||||||||||| ||||||||||    
T  14343342 gtgaattgtttgtgtgaacatatacattgttgttgagtcatatgttcatgcattcatgactgatggtgacggattttatat 14343422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 262 - 424
Target Start/End: Complemental strand, 21616044 - 21615883
Alignment:
Q  262 atcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatg-atgacttgctagatgttgtataagatattgatcataagatggtgggtta 360  Q
    ||||||| |||||| ||||  |||||||| ||| ||||||||||||| || |||||||| |  |||||| ||| |||||| ||||||||||| ||  |      
T  21616044 atcttatgatctttcgtgactagccttatatgaataaatgaagatgtgtgaatgacttgttgtatgttg-atatgatatttatcataagatgttgtatgt 21615946  T
Q  361 tctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattga 424  Q
    |||| ||||||| |||||||||| |   ||||||| ||| ||||||||| ||||||||| ||||    
T  21615945 tctc-ttacttggaatatgagaaataaatggaatggtgagactatatgaaatagttgatgttga 21615883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 146 - 216
Target Start/End: Original strand, 24226480 - 24226551
Alignment:
Q  146 tatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgta 216  Q
    ||||||| ||||||||||||| ||||| |||||| ||||||||||| ||||||| ||| ||||| |||||||    
T  24226480 tatacatagtcgaggccctagagtttatatacttggttttggttcatttgtctcaattattttagagttgta 24226551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 33150283 - 33150374
Alignment:
Q  126 actcatatgtaatttgtgtatatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgta 216  Q
    |||||||||| ||||  || ||||||| ||||||||||||  ||||| |||||| ||||||||||| ||||||| ||| ||||| |||||||    
T  33150283 actcatatgtgatttaagtgtatacatagtcgaggccctaaagtttatatacttggttttggttcatttgtctcaattattttagagttgta 33150374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 21108780 - 21108706
Alignment:
Q  146 tatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctca-ttgttttaaagttgtaaaa 219  Q
    ||||||| ||||| ||||||| |||||  ||||| || |||||||| |||||||| |||||||||||||||||||    
T  21108780 tatacatagtcgaagccctagagtttatttacttggtattggttcatttgtctcaattgttttaaagttgtaaaa 21108706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 618 - 655
Target Start/End: Complemental strand, 2030600 - 2030563
Alignment:
Q  618 tgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  2030600 tgtgaacatatgcattgttgttgagtcatatgttcatg 2030563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 618 - 655
Target Start/End: Complemental strand, 17908460 - 17908423
Alignment:
Q  618 tgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  17908460 tgtgaacatatgcattgttgttgagtcatatgttcatg 17908423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 618 - 655
Target Start/End: Original strand, 23985776 - 23985813
Alignment:
Q  618 tgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  23985776 tgtgaacatatgcattgttgttgagtcatatgttcatg 23985813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 618 - 655
Target Start/End: Complemental strand, 25003648 - 25003611
Alignment:
Q  618 tgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  25003648 tgtgaacatatgcattgttgttgagtcatatgttcatg 25003611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 229 - 352
Target Start/End: Complemental strand, 28901134 - 28901011
Alignment:
Q  229 gactttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatg-atgacttgctagatgt 327  Q
    ||||||||||||||  |||| ||||||| ||||||||||| ||| || ||||  |||||| | ||||||||||||||||| || |||| ||| ||  |||    
T  28901134 gactttatcggaaatggttcctttaagccaattatcttatgatc-ttcgtgactagccttgtatgactaaatgaagatgtgtgaatgaattgttatgtgt 28901036  T
Q  328 tgtataagatattgatcataagatg 352  Q
    ||  || |||||| |||||||||||    
T  28901035 tggctatgatatttatcataagatg 28901011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 229 - 352
Target Start/End: Complemental strand, 28937529 - 28937406
Alignment:
Q  229 gactttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatg-atgacttgctagatgt 327  Q
    ||||||||||||||  |||| ||||||| ||||||||||| ||| || ||||  |||||| | ||||||||||||||||| || |||| ||| ||  |||    
T  28937529 gactttatcggaaatggttcctttaagccaattatcttatgatc-ttcgtgactagccttgtatgactaaatgaagatgtgtgaatgaattgttatgtgt 28937431  T
Q  328 tgtataagatattgatcataagatg 352  Q
    ||  || |||||| |||||||||||    
T  28937430 tggctatgatatttatcataagatg 28937406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 369 - 419
Target Start/End: Original strand, 110341 - 110391
Alignment:
Q  369 cttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgat 419  Q
    |||| ||||||||||||||||| |||| ||||||||||||  |||||||||    
T  110341 cttggaatatgagaattgtttgaaatggtgaaactatatgtgatagttgat 110391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 427
Target Start/End: Complemental strand, 3672920 - 3672867
Alignment:
Q  374 aatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    |||||||||| | |||||| || |||||||||||||| |||||||| |||||||    
T  3672920 aatatgagaaatatttggagtggtgaaactatatgatttagttgatgttgaatg 3672867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 419
Target Start/End: Original strand, 4201322 - 4201374
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgat 419  Q
    ||||||| ||||||||||| | ||| |||| |||||||||||||||||||||||    
T  4201322 ttacttggaatatgagaat-gcttgaaatggtgaaactatatgatatagttgat 4201374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 618 - 655
Target Start/End: Original strand, 18225568 - 18225605
Alignment:
Q  618 tgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||||||||||||||||||||| ||| ||||||||||||    
T  18225568 tgtgaacatatgcattgttgttgagccatatgttcatg 18225605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 419
Target Start/End: Complemental strand, 20615534 - 20615482
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgat 419  Q
    ||||||| ||||||||||| | ||| |||| |||||||||||||||||||||||    
T  20615534 ttacttggaatatgagaat-gcttgaaatggtgaaactatatgatatagttgat 20615482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 419
Target Start/End: Original strand, 21234762 - 21234814
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgat 419  Q
    ||||||| ||||||||||| | ||| |||| |||||||||||||||||||||||    
T  21234762 ttacttggaatatgagaat-gcttgaaatggtgaaactatatgatatagttgat 21234814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 410
Target Start/End: Complemental strand, 23493014 - 23492930
Alignment:
Q  325 tgttgtataagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgat 410  Q
    ||||| ||| |||||| ||||||||||| ||  |  |||| ||||||| |||||||||| || ||||| |||||||||||||||||    
T  23493014 tgttggatatgatatttatcataagatgttgtatgttctc-ttacttggaatatgagaaatgattggagtgatgaaactatatgat 23492930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 419
Target Start/End: Original strand, 25901682 - 25901734
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgat 419  Q
    ||||||| ||||||||||| | ||| |||| |||||||||||||||||||||||    
T  25901682 ttacttggaatatgagaat-gcttgaaatggtgaaactatatgatatagttgat 25901734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 419
Target Start/End: Complemental strand, 37051906 - 37051854
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgat 419  Q
    ||||||| ||||||||||| | |||||||| |||||||||||||||||| ||||    
T  37051906 ttacttggaatatgagaat-gcttggaatggtgaaactatatgatatagctgat 37051854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 504 - 587
Target Start/End: Complemental strand, 2030625 - 2030542
Alignment:
Q  504 ttggtgagattctggtgaattgtttgtgtgaacatatgtattgttg-tgagatatatgtttatacgtacatgactgatggtgaca 587  Q
    ||||||||| | |||||| ||||| ||||||||||||| ||||||| ||||  ||||||| || | |||||||||||||| ||||    
T  2030625 ttggtgagaatatggtgagttgtt-gtgtgaacatatgcattgttgttgagtcatatgttcatgcatacatgactgatggagaca 2030542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 8952619 - 8952659
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||||||| |||||||||| |||||||||||| |||||    
T  8952619 taaccatctagagatgtttttaggaaagaaataacgttgta 8952659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 20313721 - 20313669
Alignment:
Q  148 tacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctca 200  Q
    ||||| ||||||||||||| |||||  ||||| ||||||||||| ||||||||    
T  20313721 tacatagtcgaggccctagagtttatttacttggttttggttcatttgtctca 20313669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 22357525 - 22357565
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||||||| |||||||||| |||||||||||| |||||    
T  22357525 taaccatctagagatgtttttaggaaagaaataacgttgta 22357565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 366 - 426
Target Start/End: Original strand, 27185070 - 27185129
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaat 426  Q
    ||||||| ||||||||||| ||||| |||| ||||||||||||  ||||||||| ||||||    
T  27185070 ttacttggaatatgagaat-gtttgaaatggtgaaactatatgtgatagttgatgttgaat 27185129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 40726161 - 40726121
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||||||| |||||||||| |||||||||||| |||||    
T  40726161 taaccatctagagatgtttttaggaaagaaataaccttgta 40726121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 162; Significance: 4e-86; HSPs: 2)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 415 - 655
Target Start/End: Complemental strand, 1465 - 1224
Alignment:
Q  415 ttgatattgaatgttgatgatgaaatgttggtgggttcatatatgacatgtgatgatggactattagtggatgcatatatgctaattgtttggtgagatt 514  Q
    ||||||||||||| ||||| ||||||||||||| || ||||||||||||||||||||||| | || ||| ||||||||||||||| ||||||||||||||    
T  1465 ttgatattgaatgatgatggtgaaatgttggtgagtgcatatatgacatgtgatgatggattgttggtgaatgcatatatgctaagtgtttggtgagatt 1366  T
Q  515 ctggtgaattgtttgtgtgaacatatgtattgttg-tgagatatatgtttatacgtacatgactgatggtgacagattttatatccaatgtagagaatgg 613  Q
     |||||||||||||||||||||||||||| | ||| |||||||||||||||||  ||||||||||||||||| |||||||||||||||||||| ||||||    
T  1365 gtggtgaattgtttgtgtgaacatatgtactattgttgagatatatgtttatagatacatgactgatggtgatagattttatatccaatgtagtgaatgg 1266  T
Q  614 tttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||| |||||||||||||||||||||||| |||||||||||||    
T  1265 tttgtgtgaacatatgcattgttgtcgactcatatgttcatg 1224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 602
Target Start/End: Complemental strand, 1273 - 1188
Alignment:
Q  518 gtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    |||||| ||||||||||||||||| |||||||| ||   ||||||| || | | |||||||||||||||| |||||||||||||||    
T  1273 gtgaatggtttgtgtgaacatatgcattgttgtcgactcatatgttcatgcattcatgactgatggtgacggattttatatccaat 1188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 161; Significance: 2e-85; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 85 - 348
Target Start/End: Original strand, 13327508 - 13327771
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgtttagatacttagttt 184  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||| ||||||| ||||| |||||  ||||||||||    
T  13327508 aagtgagttggcctatgagacgttgatgtatacactactgcactcatatgtgacttgtgtatatacatggtcgaggtcctagagtttatgtacttagttt 13327607  T
Q  185 tggttcaattgtctcattgttttaaagttgtaaaagggaagacggactttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcag 284  Q
    |||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||| ||||||| |||||||||||||||||| ||||  ||    
T  13327608 tggttcaattgtctcattgttttaaagttgtaaaaggagagacggac-ttatcggaaaatgttcctttaagccaattatcttataatctttcgtgactag 13327706  T
Q  285 ccttatgtgact-aaatgaagatgtatgatgacttgctagatgttgtataagatattgatcataa 348  Q
    | |||||||||| |||||||||||| |||||| ||| ||||||||| ||| |||||| |||||||    
T  13327707 ctttatgtgactaaaatgaagatgtgtgatgaattgttagatgttggatatgatatttatcataa 13327771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 90 - 270
Target Start/End: Original strand, 51962109 - 51962289
Alignment:
Q  90 agttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgtttagatacttagttttggtt 189  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||| || |||| ||||| ||||| ||||| |||||| |||    
T  51962109 agttggcctatgagacgttgatgtatacactactgcactcatatgtgacttgtgtatatacatggttgaggtcctagagtttatatactcagttttagtt 51962208  T
Q  190 caattgtctcattgttttaaagttgtaaaagggaagacggactttatcggaaaatgttcttttaagctaattatcttataa 270  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||| ||  |||||||||||||    
T  51962209 caattgtctcattgttttaaagttgtaaaaggaaagatggactttatcggaaaatgttattttgagtcaattatcttataa 51962289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 489 - 655
Target Start/End: Original strand, 31413676 - 31413842
Alignment:
Q  489 atatatgctaattgtttggtgagattctggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgaca 587  Q
    ||||||||||| |||| ||||||||| |||||||||||||||||||||||||| |||||||| |||| |||||||||| | ||||||||||||||||||     
T  31413676 atatatgctaagtgtt-ggtgagattgtggtgaattgtttgtgtgaacatatgcattgttgttgagacatatgtttatgcatacatgactgatggtgacg 31413774  T
Q  588 gattttatatccaatgtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  31413775 gattttatatccaatgtggtgaatggtttgtgtgaacatatgcattgttgtcgagtcatatgttcatg 31413842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 85 - 273
Target Start/End: Original strand, 11883211 - 11883399
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgtttagatacttagttt 184  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||| ||| |||||| |||||| ||||| |||||||| ||    
T  11883211 aagtgagttggcctatgagacgttgatgtatacactacttcactcatatgtgatttgtgtatatgcatagtcgagaccctagagtttatatacttag-tt 11883309  T
Q  185 tggttcaattgtctcattgttttaaagttgtaaaagggaagacggactttatcggaaaatg-ttcttttaagctaattatcttataatct 273  Q
    ||||||||||||||||||||||||||||||||||| |  |||| |||||||||| |||||| ||||||||||  |||| |||||| ||||    
T  11883310 tggttcaattgtctcattgttttaaagttgtaaaatgagagacagactttatcgaaaaatgattcttttaagtcaattgtcttatgatct 11883399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 504 - 654
Target Start/End: Original strand, 54039952 - 54040103
Alignment:
Q  504 ttggtgagattctggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    ||||||||| | ||||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||||||||||||||||| ||||||||||||||     
T  54039952 ttggtgagaatatggtgaattgtttgtatgaacatatgtattgttgttgagatatatgtttatgcatacatgactgatggtgacggattttatatccaac 54040051  T
Q  603 gtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcat 654  Q
    || | || | |||| ||||||||||||||||||||| |||||||||||||||    
T  54040052 gtggtgagttgtttgtgtgaacatatgcattgttgttgagtcatatgttcat 54040103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 504 - 654
Target Start/End: Original strand, 54049239 - 54049390
Alignment:
Q  504 ttggtgagattctggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    ||||||||| | ||||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||||||||||||||||| ||||||||||||||     
T  54049239 ttggtgagaatatggtgaattgtttgtatgaacatatgtattgttgttgagatatatgtttatgcatacatgactgatggtgacggattttatatccaac 54049338  T
Q  603 gtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcat 654  Q
    || | || | |||| ||||||||||||||||||||| |||||||||||||||    
T  54049339 gtggtgagttgtttgtgtgaacatatgcattgttgttgagtcatatgttcat 54049390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 229 - 427
Target Start/End: Original strand, 33369952 - 33370151
Alignment:
Q  229 gactttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatg-atgacttgctagatgt 327  Q
    |||||||||| |||  |||||||||||| ||||||||||| |||||| ||||  |||||||| ||||||||||||||||| || |||  ||| || ||||    
T  33369952 gactttatcgaaaatggttcttttaagccaattatcttatgatctttagtgactagccttatatgactaaatgaagatgtgtgaatggattgttatatgt 33370051  T
Q  328 tgtataagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    || ||| |||||| |||||||| || ||  || |||| ||||||| |||||||||| | |||| | || |||||||||||||| |||||||| |||||||    
T  33370052 tggatatgatatttatcataaggtgttgtattttctctttacttggaatatgagaaatatttgaagtggtgaaactatatgatgtagttgatgttgaatg 33370151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 13327385 - 13327472
Alignment:
Q  1 tcttaaccatctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatgaag 87  Q
    |||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  13327385 tcttaaccatctagggatatttttgtgaaagaaatagctttgtaataagggcttagtgagtccttgtgttttcttgactttaatgaag 13327472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 232 - 437
Target Start/End: Original strand, 9591855 - 9592051
Alignment:
Q  232 tttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatgatgacttgctagatgttgta 331  Q
    |||||||||||   ||||||| ||| ||||||||||||||| || ||||  |||||||||| ||||||||||         ||| ||| |||||| || |    
T  9591855 tttatcggaaatgattctttttagccaattatcttataatcattcgtgactagccttatgtaactaaatgaa---------tgaattgttagatgctgga 9591945  T
Q  332 taagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatgttga 431  Q
    || |||||||||||||||||| ||  || |||| ||||||||||||||| || | ||||||||||||||||||| |||| |||||||| ||||||| ||     
T  9591946 tatgatattgatcataagatgttgtattttctctttacttgtaatatgaaaaatatttggaatgatgaaactatgtgatgtagttgatgttgaatgatgt 9592045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 18910181 - 18910094
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgttta 172  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||| || |||| ||||| |||||    
T  18910181 aagtgagttggcctatgaaacgttgatgtatacactactgcactcatatgtgatttgtgtatatacatggttgaggtcctagagttta 18910094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 53770152 - 53770065
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgttta 172  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||| || |||| ||||| |||||    
T  53770152 aagtgagttggcctatgaaacgttgatgtatacactactgcactcatatgtgatttgtgtatatacatggttgaggtcctagagttta 53770065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 17937604 - 17937516
Alignment:
Q  178 ttagttttggttcaattgtctcattgttttaaagttgtaaaagggaagacggactttatcggaaaatgttcttttaagctaattatctt 266  Q
    ||||||||||| |||||||||||||||||||||||||| |||||  ||| ||||||||||||||||| ||||||||||| |||| ||||    
T  17937604 ttagttttggtgcaattgtctcattgttttaaagttgtgaaaggagagatggactttatcggaaaatattcttttaagccaattgtctt 17937516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 580 - 655
Target Start/End: Complemental strand, 11637219 - 11637144
Alignment:
Q  580 tggtgacagattttatatccaatgtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||||||| ||||||||||||||||| | ||||||||| |||||||||||| |||||||||||||||||||||||||    
T  11637219 tggtgacggattttatatccaatgtggtgaatggtttgtgtgaacatatggattgttgtcgagtcatatgttcatg 11637144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 16260573 - 16260486
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgttta 172  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||| | |||||||||||||| || |||| ||||| |||||    
T  16260573 aagtgagttggcctatgaaacgttgatgtatacactactgcactcatatgtgacttgtgtatatacatggttgaggtcctagagttta 16260486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 18910297 - 18910218
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatgaa 86  Q
    |||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||| || |||||||||||||||    
T  18910297 catctagggatgtttttatggaagaaatagctttgtattaagggcttagtgagtccttgtgttttcttgactttaatgaa 18910218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 51961988 - 51962067
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatgaa 86  Q
    |||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||| || |||||||||||||||    
T  51961988 catctagggatgtttttatggaagagatagctttgtaataagggcttagtgagtccttgtgttttcttgactttaatgaa 51962067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 53770268 - 53770189
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatgaa 86  Q
    |||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||| || |||||||||||||||    
T  53770268 catctagggatgtttttatggaagaaatagctttgtattaagggcttagtgagtccttgtgttttcttgactttaatgaa 53770189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 8604121 - 8604056
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||    
T  8604121 aagtgagttggcctatgagacgttgatgtatacactactgcacttatatgtgatttgtgtatatac 8604056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 246 - 410
Target Start/End: Complemental strand, 34558943 - 34558780
Alignment:
Q  246 ttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatg-atgacttgctagatgttgtataagatattgatc 344  Q
    ||||||||||| ||||||||||| |||||| ||||| |||||||| |||||||||||||||||  | |||| ||| || |||||| ||| |||||| |||    
T  34558943 ttcttttaagccaattatcttatgatctttcgtgattagccttatatgactaaatgaagatgtgcgaatgaattgttatatgttg-atatgatatttatc 34558845  T
Q  345 ataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgat 410  Q
    |||||||| ||  |  |||| ||||||| |||||||||| | |||||| || ||||||||||||||    
T  34558844 ataagatgttgtatgttctc-ttacttggaatatgagaaatatttggagtggtgaaactatatgat 34558780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 146 - 266
Target Start/End: Complemental strand, 18739004 - 18738885
Alignment:
Q  146 tatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctcattgttttaaagttgtaaaagggaagacggactttatcggaaaatg 245  Q
    ||||||| ||||||||| ||| |||||  ||||| ||||||||||| |||||||||||||||||||||||||||||  ||||| ||||||||| ||||||    
T  18739004 tatacatagtcgaggcc-tagagtttatttacttggttttggttcatttgtctcattgttttaaagttgtaaaaggagagacgaactttatcgaaaaatg 18738906  T
Q  246 ttcttttaagctaattatctt 266  Q
     |  || |||| |||||||||    
T  18738905 gttcttaaagccaattatctt 18738885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 366 - 428
Target Start/End: Original strand, 17957571 - 17957633
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatgt 428  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  17957571 ttacttggaatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatgt 17957633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 18909609 - 18909548
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  18909609 ttacttggaatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 18909548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 53769580 - 53769519
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  53769580 ttacttggaatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 53769519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 415 - 602
Target Start/End: Complemental strand, 11637309 - 11637108
Alignment:
Q  415 ttgatattgaatgttgatgatgaaatgttggtgggttcatatatgacatgtgatgatggactattagtggatgcatatatgctaattgtttggtga--ga 512  Q
    ||||||||||||| |  || |||| |||||||| || |||||||||||||||||| || | | || ||| ||||||||||||||| ||||||||||  ||    
T  11637309 ttgatattgaatgattgtggtgaattgttggtgagtgcatatatgacatgtgatggtgaattgttggtgaatgcatatatgctaagtgtttggtgacgga 11637210  T
Q  513 ttct-----------ggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatcca 600  Q
    || |           ||||||| ||||||||||||||||| |||||||| |||  ||||||| || | | |||||||||||||||| |||||||||||||    
T  11637209 ttttatatccaatgtggtgaatggtttgtgtgaacatatggattgttgtcgagtcatatgttcatgcattcatgactgatggtgacggattttatatcca 11637110  T
Q  601 at 602  Q
    ||    
T  11637109 at 11637108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 519 - 601
Target Start/End: Complemental strand, 8603378 - 8603295
Alignment:
Q  519 tgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaa 601  Q
    ||||||||||||||||||||||| ||| |||| |||| |||||||||| | | |||||||||||||||| ||||||||||||||    
T  8603378 tgaattgtttgtgtgaacatatgcattattgttgagacatatgtttatgcattcatgactgatggtgacggattttatatccaa 8603295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 11823530 - 11823472
Alignment:
Q  92 ttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  11823530 ttggcctatgaaacgttgatgtatacactactgcactcatatgttatttgtgtatatac 11823472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 2450565 - 2450626
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  2450565 ttacttgggatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 2450626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 7852730 - 7852669
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||  ||||||||||||||||||||||| |||||||    
T  7852730 ttacttggaatatgagaattgtttggaatagtgaaactatatgatatagttgatgttgaatg 7852669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 22273964 - 22273903
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  22273964 ttacttgggatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 22273903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 121 - 244
Target Start/End: Complemental strand, 8603919 - 8603795
Alignment:
Q  121 actgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgtaaaa 219  Q
    |||| |||||||||| || |  || ||||||| ||||||||||||| ||||| |||||| ||||||||||| ||||||| ||| ||||||||||||||||    
T  8603919 actgcactcatatgtgatctaagtgtatacatagtcgaggccctagagtttatatacttggttttggttcatttgtctcaattattttaaagttgtaaaa 8603820  T
Q  220 gggaagacggactttatcggaaaat 244  Q
     |  ||||| ||||| ||| |||||    
T  8603819 tgagagacgaactttgtcgaaaaat 8603795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 146 - 308
Target Start/End: Complemental strand, 15549674 - 15549510
Alignment:
Q  146 tatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgtaaaagggaagacggactttatcggaaaat 244  Q
    ||||||| ||||||||||||| ||||| |||||| || |||||||| ||||||| ||| ||||| ||||||| || |  ||||| |||||  ||||||      
T  15549674 tatacatagtcgaggccctagagtttatatacttggtattggttcatttgtctcaattattttagagttgtagaatgagagacgaactttgccggaaata 15549575  T
Q  245 gttcttttaagctaattatcttat-aatcttttgtgatcagccttatgtgactaaatgaagatgt 308  Q
     ||  ||||||| ||||||||||| ||||||| ||||  | |||||| |||||||||||||||||    
T  15549574 atttctttaagccaattatcttataaatctttcgtgactatccttatatgactaaatgaagatgt 15549510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 16260689 - 16260610
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatgaa 86  Q
    |||||||||||||||||||| |||||||| ||| ||| |||||||||||||||||||| || || |||||| ||||||||    
T  16260689 catctagggatgtttttatggaagaaatagcttcgtattaagggcttagtgagtccttttgttttcttgaccttaatgaa 16260610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 240
Target Start/End: Original strand, 40040102 - 40040217
Alignment:
Q  126 actcatatgtaatttgtgtatatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgtaaaagggaa 224  Q
    |||||||||| || |  |||||||||| |||||||||||||  ||||  ||||| ||||||||||| ||||||| |||||||||||||||||||| |  |    
T  40040102 actcatatgtgatctaagtatatacatagtcgaggccctagaatttatttacttggttttggttcatttgtctcaattgttttaaagttgtaaaatgaga 40040201  T
Q  225 gacggactttatcgga 240  Q
    |||| ||||| |||||    
T  40040202 gacgaactttgtcgga 40040217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 8604241 - 8604160
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtgttacttgactttaatga 85  Q
    ||||||||||||| || ||||||||||||||||||||||||| |||||  |||||||| ||| |||  |||||| |||||||    
T  8604241 taaccatctaggggtgcttttatgaaagaaataactttgtaaaaagggtctagtgagttcttatgtggcttgacattaatga 8604160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 16259963 - 16259902
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| |||| ||||||||||||||| || |||||||    
T  16259963 ttacttggaatatgagaattgtttggaatggtgaagctatatgatatagttaatgttgaatg 16259902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 17937863 - 17937798
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    |||||||||||||||||| |||||||||||| || ||||  |||||||||| ||||||||||||||    
T  17937863 aagtgagttggcctatgaaacgttgatgtatgcattactacactcatatgtgatttgtgtatatac 17937798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 33340765 - 33340704
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| ||||||||||||  ||||||||| |||||||    
T  33340765 ttacttggaatatgagaattgtttggaatggtgaaactatatgtgatagttgatgttgaatg 33340704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 516 - 590
Target Start/End: Original strand, 54040053 - 54040128
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagat 590  Q
    |||||| ||||||||||||||||||| |||||||| |||  ||||||| |||| |||||||||||||| |||||||    
T  54040053 tggtgagttgtttgtgtgaacatatgcattgttgttgagtcatatgttcatacatacatgactgatggagacagat 54040128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 516 - 590
Target Start/End: Original strand, 54049340 - 54049415
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagat 590  Q
    |||||| ||||||||||||||||||| |||||||| |||  ||||||| |||| |||||||||||||| |||||||    
T  54049340 tggtgagttgtttgtgtgaacatatgcattgttgttgagtcatatgttcatacatacatgactgatggagacagat 54049415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 8631077 - 8631015
Alignment:
Q  88 tgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    |||||||| |||||| ||||||||||||||||||||| |||||||| | | ||||||||||||    
T  8631077 tgagttggtctatgaaacgttgatgtatacactactgcactcatatatgacttgtgtatatac 8631015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 258 - 352
Target Start/End: Complemental strand, 14079623 - 14079530
Alignment:
Q  258 aattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatgatgacttgctagatgttgtataagatattgatcataagatg 352  Q
    |||| ||||||||||||| ||||  ||||||||||| |||||||||| ||| |||||| ||| ||||||||| ||| |||||| ||||| |||||    
T  14079623 aattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaattg-tagatgttggatatgatatttatcatgagatg 14079530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 18739232 - 18739167
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    ||||||||||||||||||  ||||||||||| |||||||  |||| ||||| ||||||||||||||    
T  18739232 aagtgagttggcctatgaagcgttgatgtatgcactactacactcttatgtgatttgtgtatatac 18739167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 29172431 - 29172470
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgt 43  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  29172431 taaccatctagagatgtttttatgaaagaaataactttgt 29172470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 126 - 240
Target Start/End: Original strand, 37917353 - 37917468
Alignment:
Q  126 actcatatgtaatttgtgtatatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctca-ttgttttaaagttgtaaaagggaa 224  Q
    |||||||||| || |  |||||||||| ||||| ||||||   ||||  ||||| ||||| ||||| |||||||| ||||||||||||||||||| |  |    
T  37917353 actcatatgtgatctaagtatatacatagtcgaagccctataatttatttacttggtttttgttcatttgtctcaattgttttaaagttgtaaaatgaga 37917452  T
Q  225 gacggactttatcgga 240  Q
    |||| |||||||||||    
T  37917453 gacgaactttatcgga 37917468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 409
Target Start/End: Complemental strand, 48420735 - 48420558
Alignment:
Q  232 tttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatg-atgacttgctagatgttgt 330  Q
    |||||||||||  |||||||||||| ||||||||||| |||||| ||||  ||||||   |||||||||| |||||| || | || ||  ||  |||||     
T  48420735 tttatcggaaatggttcttttaagccaattatcttatgatctttcgtgactagccttgaatgactaaatggagatgtgtgaacgaatttttatgtgttgg 48420636  T
Q  331 ataagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatga 409  Q
    ||| |||||| ||||||||||| ||  |  |||| ||||||| |||||||||| || ||  | ||||||||||||||||    
T  48420635 atatgatatttatcataagatgttgtatgttctc-ttacttggaatatgagaaatgattatagtgatgaaactatatga 48420558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 618 - 655
Target Start/End: Original strand, 12903256 - 12903293
Alignment:
Q  618 tgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  12903256 tgtgaacatatgcattgttgttgagtcatatgttcatg 12903293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 12951976 - 12951915
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||| | |||||| || |||||||||||||| |||||||| |||||||    
T  12951976 ttacttggaatatgagaaatatttggagtggtgaaactatatgatgtagttgatgttgaatg 12951915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 618 - 655
Target Start/End: Original strand, 51962619 - 51962656
Alignment:
Q  618 tgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  51962619 tgtgaacatatgcattgttgttgagtcatatgttcatg 51962656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 619 - 655
Target Start/End: Complemental strand, 10903117 - 10903081
Alignment:
Q  619 gtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||||||||||||||| |||||||||||||||||||||    
T  10903117 gtgaacatatgcattattgtcgagtcatatgttcatg 10903081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 232 - 308
Target Start/End: Complemental strand, 15516803 - 15516727
Alignment:
Q  232 tttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgt 308  Q
    ||||| |||||  |||||||||||| ||||||||||| |||||| ||||  |||||| | |||||||||| ||||||    
T  15516803 tttattggaaatggttcttttaagccaattatcttatgatctttagtgactagccttgtatgactaaatggagatgt 15516727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 590
Target Start/End: Original strand, 12903231 - 12903317
Alignment:
Q  504 ttggtgagattctggtgaattgtttgtgtgaacatatgtattgttg-tgagatatatgtttatacgtacatgactgatggtgacagat 590  Q
    ||||||||| | |||||| ||||| ||||||||||||| ||||||| ||||  ||||||| || | |||||||||||||| |||||||    
T  12903231 ttggtgagaatttggtgagttgtt-gtgtgaacatatgcattgttgttgagtcatatgttcatgcatacatgactgatggagacagat 12903317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 23395640 - 23395678
Alignment:
Q  6 accatctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  23395640 accatctagagatgtttttaggaaagaaataactttgta 23395678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 25104972 - 25105046
Alignment:
Q  146 tatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgtaaaa 219  Q
    ||||||| ||||||||||||| |||||  | ||| | ||||||||| ||||||| |||| |||||||||||||||    
T  25104972 tatacatagtcgaggccctagagtttatttccttggatttggttcatttgtctcaattgctttaaagttgtaaaa 25105046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 618 - 655
Target Start/End: Original strand, 9304125 - 9304162
Alignment:
Q  618 tgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  9304125 tgtggacatatgcattgttgttgagtcatatgttcatg 9304162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 11883099 - 11883176
Alignment:
Q  11 ctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtgttacttgactttaatgaagt 88  Q
    |||||||| |||| |||||||||||| ||| ||| ||||||  |||||||| |||| ||| |||||| |||| |||||    
T  11883099 ctagggatcttttcatgaaagaaatagcttggtactaagggtctagtgagttcttgagttgcttgacattaaggaagt 11883176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 12774147 - 12774208
Alignment:
Q  83 tgaagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgt 144  Q
    |||||||| |||||||||||||| || ||||||||| || || |||||||||| | ||||||    
T  12774147 tgaagtgaattggcctatgagacatttatgtatacaatattgcactcatatgtgacttgtgt 12774208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 419
Target Start/End: Original strand, 16745408 - 16745460
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgat 419  Q
    ||||||| ||||||||||| | ||| |||| |||||||||||||||||||||||    
T  16745408 ttacttggaatatgagaat-gcttgaaatggtgaaactatatgatatagttgat 16745460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 13667666 - 13667706
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||||||| |||||||||| |||||||||||| |||||    
T  13667666 taaccatctagagatgtttttaggaaagaaataaccttgta 13667706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 15517074 - 15517038
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||| | |||||||||||||||||||||||||||    
T  15517074 catctagaggtgtttttatgaaagaaataactttgta 15517038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 16728771 - 16728731
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgta 44  Q
    |||| |||||| ||||||||||| |||||||||||||||||    
T  16728771 taacaatctagagatgtttttataaaagaaataactttgta 16728731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 17548114 - 17548154
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||||||| |||||||||| |||||||||||| |||||    
T  17548114 taaccatctagagatgtttttaggaaagaaataacgttgta 17548154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 20417563 - 20417523
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||||||| |||||||||| |||||||||| |||||||    
T  20417563 taaccatctagagatgtttttaggaaagaaatatctttgta 20417523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 22147339 - 22147379
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||||||| |||||||||| |||||||||||| |||||    
T  22147339 taaccatctagagatgtttttaggaaagaaataaccttgta 22147379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 37642078 - 37642118
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||||||| |||||||||| |||||||||||| |||||    
T  37642078 taaccatctagagatgtttttaggaaagaaataaccttgta 37642118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 150; Significance: 6e-79; HSPs: 4)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 415 - 655
Target Start/End: Complemental strand, 28982 - 28741
Alignment:
Q  415 ttgatattgaatgttgatgatgaaatgttggtgggttcatatatgacatgtgatgatggactattagtggatgcatatatgctaattgtttggtgagatt 514  Q
    ||||||||||||| |  || |||| |||||||| || |||||||||||||||||| || | | || ||| ||||||||||||||| ||||||||||||||    
T  28982 ttgatattgaatgattgtggtgaattgttggtgagtgcatatatgacatgtgatggtgaattgttggtgaatgcatatatgctaagtgtttggtgagatt 28883  T
Q  515 ctggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaatgtagagaatgg 613  Q
     ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||| ||||||||||| | ||||||    
T  28882 gtggtgaattgtttgtgtgaacatatgtattgttgttgagatatatgtttatacatacatgactgatggtgacggatttgatatccaatgtggtgaatgg 28783  T
Q  614 tttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||| ||||||||||||||||||||||||||||||||||||||    
T  28782 tttgtgtgaacatatgcattgttgtcgagtcatatgttcatg 28741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 485 - 655
Target Start/End: Complemental strand, 20928 - 20757
Alignment:
Q  485 atgcatatatgctaattgtttggtgagattctggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggt 583  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||    
T  20928 atgcatatatgctaaatgtttggtgagattgtggtgaattgtttgtgtgaacatatgtattgttgttgagatatatgtttattcatacatgactgatggt 20829  T
Q  584 gacagattttatatccaatgtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||| ||||||||||| ||||| | || | |||| ||||||||||||||||||||| ||||||||||||||||    
T  20828 gactgattttatatctaatgtggtgatttgtttgtgtgaacatatgcattgttgttgagtcatatgttcatg 20757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 516 - 602
Target Start/End: Complemental strand, 20808 - 20721
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    |||||| ||||||||||||||||||| |||||||| |||  ||||||| || | | ||||||||||||||||||||||||||||||||    
T  20808 tggtgatttgtttgtgtgaacatatgcattgttgttgagtcatatgttcatgcattcatgactgatggtgacagattttatatccaat 20721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 516 - 602
Target Start/End: Complemental strand, 28792 - 28705
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    |||||||| ||||||||||||||||| |||||||| |||  ||||||| || | | |||||||||||||||||||| |||||||||||    
T  28792 tggtgaatggtttgtgtgaacatatgcattgttgtcgagtcatatgttcatgcattcatgactgatggtgacagatattatatccaat 28705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 149; Significance: 2e-78; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 440 - 655
Target Start/End: Complemental strand, 18165027 - 18164811
Alignment:
Q  440 tgttggtgggttcatatatgacatgtgatgatggactattagtggatgcatatatgctaattgtttggtgagattctggtgaattgtttgtgtgaacata 539  Q
    |||||||| || |||||||||||||||||| |||| | || ||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  18165027 tgttggtgagtgcatatatgacatgtgatggtggattgttggtgaatgcatatatgctaagtgtttggtgagattgtggtgaattgtttgtgtgaacata 18164928  T
Q  540 tgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaatgtagagaatggtttatgtgaacatatgcattgttgt 638  Q
    ||||||||||| ||||||||||||||||| ||||||| ||||||||||  |||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  18164927 tgtattgttgttgagatatatgtttatacatacatgattgatggtgacgaattttatatccaatgtagtgaatggtttgtgtgaacatatgcattgttgt 18164828  T
Q  639 cgagtcatatgttcatg 655  Q
    |||||||||||||||||    
T  18164827 cgagtcatatgttcatg 18164811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 230 - 437
Target Start/End: Complemental strand, 21194233 - 21194025
Alignment:
Q  230 actttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatg-atgacttgctagatgtt 328  Q
    |||||||||||||  |||| ||||||| ||||||||||| |||||| ||||  ||| |||| ||||||||||||||||| || |||| ||| || |||||    
T  21194233 actttatcggaaatggttcctttaagccaattatcttatgatctttcgtgactagctttatatgactaaatgaagatgtgtgaatgaattgatatatgtt 21194134  T
Q  329 gtataagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatgt 428  Q
    | ||| |||||| |||||||  || ||  || |||| |||||||  ||||||||| | |||||| ||||||||||||||||| |||||||| |||||||     
T  21194133 ggatatgatatttatcataaagtgttgtattttctcattacttgggatatgagaaatttttggagtgatgaaactatatgatgtagttgatgttgaatga 21194034  T
Q  429 tgatgatga 437  Q
    || ||||||    
T  21194033 tgttgatga 21194025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 258 - 419
Target Start/End: Original strand, 22144514 - 22144675
Alignment:
Q  258 aattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatgatgacttgctagatgttgtataagatattgatcataagatggtggg 357  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| |||||| |||||| ||| |||||||||  || |||||||||||||||||| ||      
T  22144514 aattatcttataaccttttgtgactagccttatgtgactaaatggagatgtgtgatgaattgttagatgttggttatgatattgatcataagatgttgta 22144613  T
Q  358 ttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgat 419  Q
    || |||| ||||| | |||| ||||| | |||| |||| | |||||||||||| ||||||||    
T  22144614 ttttctctttactcgaaataggagaaatatttgaaatggtaaaactatatgatgtagttgat 22144675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 232 - 429
Target Start/End: Original strand, 8539054 - 8539252
Alignment:
Q  232 tttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatg-atgacttgctagatgttgt 330  Q
    |||||||| ||  |||||||||||| ||||||||||| |||||| ||||  |||||||| ||||||||||||||||| || |||| ||| || ||||||     
T  8539054 tttatcgggaatggttcttttaagccaattatcttatgatctttcgtgactagccttatatgactaaatgaagatgtgtgaatgaattgttatatgttgg 8539153  T
Q  331 ataagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatgtt 429  Q
    ||| |||||| |||||||  || ||  || |||| ||||||| |||||||||| | ||||||    |||||||||||||| |||||||| |||||||||    
T  8539154 atatgatatttatcataacgtgttgtattttctctttacttggaatatgagaaatatttggagctgtgaaactatatgatgtagttgatgttgaatgtt 8539252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 232 - 429
Target Start/End: Original strand, 8604293 - 8604491
Alignment:
Q  232 tttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatg-atgacttgctagatgttgt 330  Q
    |||||||| ||  |||||||||||| ||||||||||| |||||| ||||  |||||||| ||||||||||||||||| || |||| ||| || ||||||     
T  8604293 tttatcgggaatggttcttttaagccaattatcttatgatctttcgtgactagccttatatgactaaatgaagatgtgtgaatgaattgttatatgttgg 8604392  T
Q  331 ataagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatgtt 429  Q
    ||| |||||| |||||||  || ||  || |||| ||||||| |||||||||| | ||||||    |||||||||||||| |||||||| |||||||||    
T  8604393 atatgatatttatcataacgtgttgtattttctctttacttggaatatgagaaatatttggagctgtgaaactatatgatgtagttgatgttgaatgtt 8604491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 20825894 - 20825981
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgttta 172  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||| || |||| ||||| |||||    
T  20825894 aagtgagttggcctatgaaacgttgatgtatacactactgcactcatatgtgatttgtgtatatacatggttgaggtcctagagttta 20825981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 232 - 427
Target Start/End: Complemental strand, 27673905 - 27673710
Alignment:
Q  232 tttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatg-atgacttgctagatgttgt 330  Q
    |||||||||||  |||||||||||| ||||||||||| |||||| ||||  |||||| | |||||||||| |||||| || |||| ||| ||  |||||     
T  27673905 tttatcggaaatggttcttttaagccaattatcttatgatctttcgtgactagccttgtatgactaaatggagatgtgtgaatgaattgttatgtgttgg 27673806  T
Q  331 ataagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||| |||||| |||||||||||  |  |  |||| ||||||| |||||||||| || ||||| ||||||||||||||||  |||||||| |||||||    
T  27673805 atatgatatttatcataagatgtcgtatgttctc-ttacttggaatatgagaaatgattggagtgatgaaactatatgaggtagttgatgttgaatg 27673710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 20825778 - 20825857
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatgaa 86  Q
    |||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||| || |||||||||||||||    
T  20825778 catctagggatgtttttatggaagaaatagctttgtattaagggcttagtgagtccttgtgttttcttgactttaatgaa 20825857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 20826466 - 20826527
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  20826466 ttacttggaatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 20826527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 41393371 - 41393310
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  41393371 ttacttggaatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 41393310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 76730 - 76794
Alignment:
Q  86 agtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    ||||||||||||||||| ||||||||||||| ||||||| |||||||||| ||||||||||||||    
T  76730 agtgagttggcctatgaaacgttgatgtatatactactgcactcatatgtgatttgtgtatatac 76794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 518 - 602
Target Start/End: Complemental strand, 18164860 - 18164775
Alignment:
Q  518 gtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    |||||| ||||||||||||||||| |||||||| |||  ||||||| || | | ||||||||||||||||||||||||||||||||    
T  18164860 gtgaatggtttgtgtgaacatatgcattgttgtcgagtcatatgttcatgcattcatgactgatggtgacagattttatatccaat 18164775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 246 - 424
Target Start/End: Original strand, 5769299 - 5769479
Alignment:
Q  246 ttcttttaagctaattatcttataa-tcttttgtgatcagccttatgtgactaaatgaagatgtatg-atgacttgctagatgttgtataagatattgat 343  Q
    |||||| |||||||||| ||||||| ||||| ||||  |||||||| ||||||||||||||| | || |||| ||| ||||||| | ||| |||||| ||    
T  5769299 ttctttaaagctaattaccttataaatctttcgtgactagccttatatgactaaatgaagatatgtgaatgagttgttagatgtcgaatatgatatttat 5769398  T
Q  344 cataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattga 424  Q
    |||||| || ||  || |||| ||||||| |||||||||| | |||| | || || |||||||| |||| |||||| ||||    
T  5769399 cataaggtgttgcattttctctttacttggaatatgagaagtatttgaagtggtggaactatattatattgttgatgttga 5769479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 415 - 495
Target Start/End: Complemental strand, 18165088 - 18165008
Alignment:
Q  415 ttgatattgaatgttgatgatgaaatgttggtgggttcatatatgacatgtgatgatggactattagtggatgcatatatg 495  Q
    ||||||||||||| ||||| ||||||||||||| || |||||||||||||||||| |||| | || |||  ||||||||||    
T  18165088 ttgatattgaatgatgatggtgaaatgttggtgagtgcatatatgacatgtgatggtggattgttggtgagtgcatatatg 18165008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 504 - 582
Target Start/End: Complemental strand, 20252905 - 20252826
Alignment:
Q  504 ttggtgagattctggtgaattgtttgtgtgaacatatgtattgttg-tgagatatatgtttatacgtacatgactgatgg 582  Q
    ||||||||| | |||||| |||||||| |||||||||||||||||| | ||||||||||| || | ||||||||||||||    
T  20252905 ttggtgagaatatggtgagttgtttgtatgaacatatgtattgttgttaagatatatgttcatgcatacatgactgatgg 20252826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 283 - 425
Target Start/End: Original strand, 37235126 - 37235267
Alignment:
Q  283 agccttatgtgactaaatgaagatgtatga-tgacttgctagatgttgtataagatattgatcataagatggtgggttatctcgttacttgtaatatgag 381  Q
    |||||||| ||||||||||||||||| ||| ||||||| |  |||||| ||| |||||| ||||||| ||| ||  |  |||| ||||||| ||||||||    
T  37235126 agccttatatgactaaatgaagatgtgtgaatgacttgttgtatgttg-atatgatatttatcataaaatgctgtatgttctc-ttacttggaatatgag 37235223  T
Q  382 aattgtttggaatgatgaaactatatgatatagttgatattgaa 425  Q
    || | |||||| || |||||||||||||| |||||||| |||||    
T  37235224 aaatatttggagtggtgaaactatatgatgtagttgatgttgaa 37235267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 9785137 - 9785190
Alignment:
Q  162 cctagtgtttagatacttagttttggttcaattgtctcattgttttaaagttgt 215  Q
    ||||| |||||  ||||| |||||||||||||||||||||||||||||||||||    
T  9785137 cctagagtttatttacttggttttggttcaattgtctcattgttttaaagttgt 9785190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 52400541 - 52400476
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    |||||||||||| | | ||||||||||||||||||||||| ||||| || |||||||| |||||||    
T  52400541 aagtgagttggcatgtaagacgttgatgtatacactactgcactcaaatataatttgtatatatac 52400476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 76957 - 77029
Alignment:
Q  146 tatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgtaa 217  Q
    ||||||| ||||||||||||| |||||  ||||| ||||||| ||||||||||| ||| ||||||||||||||    
T  76957 tatacatagtcgaggccctagagtttatttacttggttttggctcaattgtctcaattattttaaagttgtaa 77029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 246 - 352
Target Start/End: Complemental strand, 17608004 - 17607898
Alignment:
Q  246 ttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatga-tgacttgctagatgttgtataagatattgatc 344  Q
    ||||||||||| ||||||||| | ||| || ||||  |||||||| ||||||||||||||||||||| ||| ||| || |||||| ||| |||||| |||    
T  17608004 ttcttttaagccaattatcttgtgatcattcgtgactagccttatatgactaaatgaagatgtatgagtgaattgttatatgttg-atatgatatttatc 17607906  T
Q  345 ataagatg 352  Q
    || |||||    
T  17607905 atgagatg 17607898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 20053852 - 20053782
Alignment:
Q  9 atctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtgttacttgactt 79  Q
    |||||||| |||||||||||||||||||||||||||  ||| |  || |||||||||||||| ||| ||||    
T  20053852 atctaggggtgtttttatgaaagaaataactttgtataaagagtctaatgagtccttgtgttgctttactt 20053782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 229 - 352
Target Start/End: Complemental strand, 16655581 - 16655458
Alignment:
Q  229 gactttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatg-atgacttgctagatgt 327  Q
    ||||||||||||||  |||| ||||||| ||||||||||| ||| || ||||  |||||| | ||||||||||||||||| || |||| ||| ||  |||    
T  16655581 gactttatcggaaatggttcctttaagccaattatcttatgatc-ttcgtgactagccttgtatgactaaatgaagatgtgtgaatgaattgttatgtgt 16655483  T
Q  328 tgtataagatattgatcataagatg 352  Q
    ||  || |||||| |||||||||||    
T  16655482 tggctatgatatttatcataagatg 16655458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 619 - 655
Target Start/End: Complemental strand, 20192871 - 20192835
Alignment:
Q  619 gtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||||||||||||||| |||||||||||||||||||||    
T  20192871 gtgaacatatgcattattgtcgagtcatatgttcatg 20192835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 619 - 655
Target Start/End: Complemental strand, 25093523 - 25093487
Alignment:
Q  619 gtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||||||||||||||| |||||||||||||||||||||    
T  25093523 gtgaacatatgcattattgtcgagtcatatgttcatg 25093487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 425
Target Start/End: Original strand, 5471490 - 5471689
Alignment:
Q  226 acggactttatcggaaaatgttcttttaagctaattatcttataa-tcttttgtgatcagccttatgtgactaaatgaagatgtatga-tgacttgctag 323  Q
    |||||||||||||||||  ||||||| |||  ||||||||||||| ||||| ||||  |||||  | || |||||||||| ||| ||| ||| ||| ||     
T  5471490 acggactttatcggaaatggttcttt-aagacaattatcttataactctttcgtgactagcctattatgtctaaatgaaggtgtgtgaatgaattgttaa 5471588  T
Q  324 atgttgtataagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattg 423  Q
     | ||| ||| ||| || |||||||| || ||  ||||||| ||| ||| |||||||| | | |||||| || ||||||||||| || ||||||||||||    
T  5471589 gttttggatatgatgtttatcataaggtgttgtattatctctttatttg-aatatgaggaatatttggagtggtgaaactatattatgtagttgatattg 5471687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 13528357 - 13528397
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||||||| |||||||||| |||||||||||| |||||    
T  13528357 taaccatctagagatgtttttaggaaagaaataacgttgta 13528397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 51476461 - 51476421
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||||||  |||||||||| ||||||||||||||||||    
T  51476461 taaccatctaaagatgtttttaggaaagaaataactttgta 51476421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 52983630 - 52983590
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||||||| |||||||||| |||| |||||||||||||    
T  52983630 taaccatctagagatgtttttaggaaataaataactttgta 52983590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 147; Significance: 4e-77; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 85 - 427
Target Start/End: Complemental strand, 19659164 - 19658823
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgtttagatacttagttt 184  Q
    |||||||||||||| ||||||||||| |||| |||||||| |||||||||| | |||||||||||||| || |||| ||||  ||||| |||||||||||    
T  19659164 aagtgagttggcctgtgagacgttgacgtatgcactactgcactcatatgtgacttgtgtatatacatggttgaggtcctaaggtttatatacttagttt 19659065  T
Q  185 tggttcaattgtctcattgttttaaagttgtaaaagggaagacggactttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcag 284  Q
    ||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||  |||| |||||| ||| || ||||  ||    
T  19659064 tggttcaattgtctcattgttttaaagttataaaaggagagacggactttatcggaaaatgttcttttaagtcaattgtcttatgatccttcgtgactag 19658965  T
Q  285 ccttatgtgactaaatgaagatgtatgatgacttgctagatgttgtataagatattgatcataagatggtgggttatctcgttacttgtaatatgagaat 384  Q
    ||||||||| |||||| ||||||| |||||| ||| || |||||| ||| |||||| ||||| ||||| ||  || |||  ||||||| ||||||||||     
T  19658964 ccttatgtgtctaaataaagatgtgtgatgaattgttaaatgttggatatgatatttatcatgagatgttgtattttct-tttacttggaatatgagaaa 19658866  T
Q  385 tgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    | |||| | || |||||||||||||| || ||||| |||||||    
T  19658865 tatttgaattggtgaaactatatgatgtatttgatgttgaatg 19658823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 415 - 655
Target Start/End: Original strand, 16294037 - 16294278
Alignment:
Q  415 ttgatattgaatgttgatgatgaaatgttggtgggttcatatatgacatgtgatgatggactattagtggatgcatatatgctaattgtttggtgagatt 514  Q
    ||||||||||||| |  || |||| |||||||| || ||||| |||||||||||| || | | || ||| ||||||||||||||| | ||||||||||||    
T  16294037 ttgatattgaatgattgtggtgaattgttggtgagtacatatttgacatgtgatggtgaattgttggtgaatgcatatatgctaagtatttggtgagatt 16294136  T
Q  515 ctggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaatgtagagaatgg 613  Q
     ||| |||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||| | ||||||    
T  16294137 gtggcgaattgtttgtgtgaacatatgtattattgttgagatatatgtttatacatacatgactgatggtgacggattttatatccaatgtggtgaatgg 16294236  T
Q  614 tttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||| ||||||||||||||||||||||||||||||||||||||    
T  16294237 tttgtgtgaacatatgcattgttgtcgagtcatatgttcatg 16294278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 516 - 655
Target Start/End: Complemental strand, 22331446 - 22331306
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaatgtagagaatggt 614  Q
    |||||||||||||||||||||||||  |||||||| ||||||||||||||| | |||||||||||||||||| ||||||||||||||||| | || ||||    
T  22331446 tggtgaattgtttgtgtgaacatatacattgttgttgagatatatgtttatgcatacatgactgatggtgacggattttatatccaatgtggtgagtggt 22331347  T
Q  615 ttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  22331346 ttgtgtgaacatatgcattgttgtcgagtcatatgttcatg 22331306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 504 - 655
Target Start/End: Complemental strand, 22255200 - 22255048
Alignment:
Q  504 ttggtgagattctggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    ||||||||| | ||||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||||||||||||||||| |||||||||||||||    
T  22255200 ttggtgagaatatggtgaattgtttgtatgaacatatgtattgttgttgagatatatgtttatgcatacatgactgatggtgacggattttatatccaat 22255101  T
Q  603 gtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    || | || | |||| |||||||||||| |||||||| ||||||||||||||||    
T  22255100 gtggtgagttgtttgtgtgaacatatgaattgttgttgagtcatatgttcatg 22255048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 507 - 655
Target Start/End: Original strand, 42179779 - 42179928
Alignment:
Q  507 gtgagattctggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaatgta 605  Q
    |||||| | |||||| |||||||  ||||||||||||||||||| ||||||||||||||| | |||||||||||||||||| |||||||||||||||||     
T  42179779 gtgagaatatggtgagttgtttggatgaacatatgtattgttgttgagatatatgtttatgcatacatgactgatggtgacggattttatatccaatgtg 42179878  T
Q  606 gagaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    | || | |||| ||||||||||||||||||||| ||||||||||||||||    
T  42179879 gtgagttgtttgtgtgaacatatgcattgttgttgagtcatatgttcatg 42179928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 504 - 655
Target Start/End: Original strand, 7513421 - 7513573
Alignment:
Q  504 ttggtgagattctggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    ||||||||| | |||| |||||||||| ||||||||||||||||||| |||| |||||||||| | ||||||||||||||||||  ||||||||||||||    
T  7513421 ttggtgagaatatggtaaattgtttgtatgaacatatgtattgttgttgagaaatatgtttatgcatacatgactgatggtgacgaattttatatccaat 7513520  T
Q  603 gtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    || | || | |||| |||||||||||| |||||||| ||||||||||||||||    
T  7513521 gtggtgagttgtttgtgtgaacatatgtattgttgttgagtcatatgttcatg 7513573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 516 - 651
Target Start/End: Complemental strand, 22331535 - 22331399
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaatgtagagaatggt 614  Q
    ||||||||||||||||| |||||||| |||||||| |||  |||||||||| | ||||||||||||||||||| |||||||||||||||| | |||| ||    
T  22331535 tggtgaattgtttgtgtaaacatatgcattgttgttgagccatatgtttatgcatacatgactgatggtgacaaattttatatccaatgtggtgaattgt 22331436  T
Q  615 ttatgtgaacatatgcattgttgtcgagtcatatgtt 651  Q
    || ||||||||||| ||||||||| |||  |||||||    
T  22331435 ttgtgtgaacatatacattgttgttgagatatatgtt 22331399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 8943035 - 8942948
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgttta 172  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||| || |||| ||||| |||||    
T  8943035 aagtgagttggcctatgaaacgttgatgtatacactactgcactcatatgtgatttgtgtatatacatggttgaggtcctagagttta 8942948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 12636935 - 12637022
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgttta 172  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||| || |||| ||||| |||||    
T  12636935 aagtgagttggcctatgaaacgttgatgtatacactactgcactcatatgtgatttgtgtatatacatggttgaggtcctagagttta 12637022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 12642689 - 12642776
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgttta 172  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||| || |||| ||||| |||||    
T  12642689 aagtgagttggcctatgaaacgttgatgtatacactactgcactcatatgtgatttgtgtatatacatggttgaggtcctagagttta 12642776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 21275075 - 21275154
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatgaa 86  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| || |||||||||||||||    
T  21275075 catctagggatgtttttatgaaagaaatagctttgtattaagggcttagtgagtccttgtgttttcttgactttaatgaa 21275154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 42179028 - 42179115
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgttta 172  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||| || |||| ||||| |||||    
T  42179028 aagtgagttggcctatgaaacgttgatgtatacactactgcactcatatgtgatttgtgtatatacatggttgaggtcctagagttta 42179115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 19434246 - 19434310
Alignment:
Q  86 agtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  19434246 agtgagttggcctatgagacgttgatgtatacactactgcactcatatgtgatttgtgtatatac 19434310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 19659275 - 19659199
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtgttacttgactttaatgaagt 88  Q
    ||||||||||||||||||||||||||||| ||||||||    ||||||||||||| |||||||||||||||||||||||||    
T  19659275 catctagggatgtttttatgaaagaaatagctttgtaa----ggcttagtgagtctttgtgttacttgactttaatgaagt 19659199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 21275191 - 21275278
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgttta 172  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||| | |||||||||||||| || |||| ||||| |||||    
T  21275191 aagtgagttggcctatgaaacgttgatgtatacactactgcactcatatgtgacttgtgtatatacatggttgaggtcctagagttta 21275278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 85 - 166
Target Start/End: Original strand, 3799670 - 3799751
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctag 166  Q
    |||||| ||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||| || |||| |||||    
T  3799670 aagtgaattggcctatgaaacgttgatgtatacactactgcactcatatgtgatttgtgtatatacatggttgaggtcctag 3799751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 288 - 437
Target Start/End: Complemental strand, 19665678 - 19665530
Alignment:
Q  288 tatgtgactaaatgaagatgtatgatgacttgctagatgttgtataagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgt 387  Q
    ||||||| |||||| |||||| |||||| ||| ||||||||| ||  |||||||| ||||||| | || ||| |||||||||||| ||||||||||  |     
T  19665678 tatgtgattaaatggagatgtgtgatgaattgttagatgttggatgtgatattgaacataagaagttgtgttttctcgttacttgcaatatgagaaacg- 19665580  T
Q  388 ttggaatgatgaaactatatgatatagttgatattgaatgttgatgatga 437  Q
    ||| |||| |||||||||||||||||||| || ||||||| || ||||||    
T  19665579 ttgaaatgttgaaactatatgatatagttaatgttgaatgatgttgatga 19665530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 43642215 - 43642150
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  43642215 aagtgagtttgcctatgagacgttgatgtatacactactgcactcatatgtgatttgtgtatatac 43642150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 3799555 - 3799634
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatgaa 86  Q
    |||||||||||||||||||| |||||||| ||| ||| ||||||||||||||||||||||| || |||||||||||||||    
T  3799555 catctagggatgtttttatggaagaaatagcttcgtattaagggcttagtgagtccttgtgttttcttgactttaatgaa 3799634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 42178912 - 42178991
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatgaa 86  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||| || || |||||||||||||||    
T  42178912 catctagggatgtttttatgaaagaaatagctttgtattaagggcttattgagtccttttgttttcttgactttaatgaa 42178991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 12637401 - 12637462
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  12637401 ttacttggaatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 12637462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 12643261 - 12643322
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  12643261 ttacttggaatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 12643322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 21275763 - 21275824
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  21275763 ttacttggaatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 21275824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 85 - 146
Target Start/End: Complemental strand, 22577426 - 22577365
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtat 146  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  22577426 aagtgaattggcctatgagacgttgatgtatacactactgcactcatatgtgatttgtgtat 22577365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 8943150 - 8943071
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatgaa 86  Q
    |||||||||||||||||||| |||||||| ||| ||| |||||||||||||||||||| || || |||||||||||||||    
T  8943150 catctagggatgtttttatggaagaaatagcttcgtattaagggcttagtgagtccttttgttttcttgactttaatgaa 8943071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 21140796 - 21140735
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||||||||||| |||||||    
T  21140796 ttacttggaatatgagaattatttggaatggtgaaactatatgatatagttgatgttgaatg 21140735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 24967220 - 24967159
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||| || |||||||    
T  24967220 ttacttggaatatgagaattgtttggaatggtgaaactatatgatatagttaatgttgaatg 24967159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 29113696 - 29113631
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    |||||||||||||||||||||||||||||||||||   || |||||||||| ||||||||||||||    
T  29113696 aagtgagttggcctatgagacgttgatgtatacacgtatgcactcatatgtgatttgtgtatatac 29113631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 232 - 410
Target Start/End: Complemental strand, 66621 - 66443
Alignment:
Q  232 tttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatg-atgacttgctagatgttgt 330  Q
    |||||||||||   ||||||||||| ||||||||||  |||||| ||||  |||||| | |||||||||| |||||| || |||| ||| ||  ||||||    
T  66621 tttatcggaaatgattcttttaagccaattatcttacgatctttcgtgactagccttgtatgactaaatggagatgtgtgaatgaattgttatgtgttgt 66522  T
Q  331 ataagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgat 410  Q
    ||| |||||| ||||||||||| ||  |  |||| ||||||| |||||||||| || | ||| ||| |||||||||||||    
T  66521 atatgatatttatcataagatgttgtatgttctc-ttacttggaatatgagaaatgatcggagtgacgaaactatatgat 66443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 12636820 - 12636899
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatgaa 86  Q
    |||||||||||||||||||| |||||||| ||| ||| |||||||||||||||||||| || ||  ||||||||||||||    
T  12636820 catctagggatgtttttatggaagaaatagcttcgtattaagggcttagtgagtccttttgttttattgactttaatgaa 12636899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 12642574 - 12642653
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatgaa 86  Q
    |||||||||||||||||||| |||||||| ||| ||| |||||||||||||||||||| || ||  ||||||||||||||    
T  12642574 catctagggatgtttttatggaagaaatagcttcgtattaagggcttagtgagtccttttgttttattgactttaatgaa 12642653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 516 - 602
Target Start/End: Original strand, 16294227 - 16294314
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    |||||||| ||||||||||||||||| |||||||| |||  ||||||| || | | |||||||||||||||||||| |||||||||||    
T  16294227 tggtgaatggtttgtgtgaacatatgcattgttgtcgagtcatatgttcatgcattcatgactgatggtgacagatgttatatccaat 16294314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 92 - 150
Target Start/End: Original strand, 19667862 - 19667920
Alignment:
Q  92 ttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    ||||||||| ||||||||||||||||||||||| |||||||||| |||| |||||||||    
T  19667862 ttggcctataagacgttgatgtatacactactgcactcatatgtgatttatgtatatac 19667920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 378 - 427
Target Start/End: Original strand, 19888028 - 19888077
Alignment:
Q  378 tgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  19888028 tgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 19888077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 366 - 426
Target Start/End: Complemental strand, 8942569 - 8942509
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaat 426  Q
    ||||||| |||||||||||||||||||||| ||||||||||||  ||||||||| ||||||    
T  8942569 ttacttggaatatgagaattgtttggaatggtgaaactatatgtgatagttgatgttgaat 8942509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 45618234 - 45618312
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtgttacttgactttaa 82  Q
    ||||||||||||| || ||||||||||||||||||||||||  |||||  || ||||| |||||||| |||||| ||||    
T  45618234 taaccatctaggggtggttttatgaaagaaataactttgtataaagggtctaatgagttcttgtgttgcttgacattaa 45618312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 12726974 - 12726913
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||| || ||| |||| ||||||||||||||||||||||| |||||||    
T  12726974 ttacttggaatatgagaaatgcttgaaatggtgaaactatatgatatagttgatgttgaatg 12726913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 232 - 352
Target Start/End: Original strand, 24088470 - 24088591
Alignment:
Q  232 tttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgt-atgatgacttgctagatgttgt 330  Q
    |||||||||||  |||||||||||| ||||||||||| |||||| ||||  |||||| | |||||||||| |||||| |  |||| ||| ||  |||||     
T  24088470 tttatcggaaatggttcttttaagccaattatcttatgatctttagtgactagccttgtatgactaaatggagatgtgagaatgaattgttatgtgttgg 24088569  T
Q  331 ataagatattgatcataagatg 352  Q
    ||| |||||| |||||||||||    
T  24088570 atatgatatttatcataagatg 24088591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 34823119 - 34823058
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||| || ||| |||| ||||||||||||||||||||||| |||||||    
T  34823119 ttacttggaatatgagaaatgcttgaaatggtgaaactatatgatatagttgatgttgaatg 34823058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 217
Target Start/End: Complemental strand, 22331990 - 22331918
Alignment:
Q  146 tatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgtaa 217  Q
    ||||||| ||||||||||||| |||||  ||||| ||||||||||||||||||| ||| | ||||||||||||    
T  22331990 tatacatagtcgaggccctagagtttatttacttggttttggttcaattgtctcaattatgttaaagttgtaa 22331918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 516 - 602
Target Start/End: Complemental strand, 22331357 - 22331270
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    |||||| | ||||||||||||||||| |||||||| |||  ||||||| || | | ||||||||| |||||| |||||||||||||||    
T  22331357 tggtgagtggtttgtgtgaacatatgcattgttgtcgagtcatatgttcatgcattcatgactgacggtgacggattttatatccaat 22331270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 516 - 590
Target Start/End: Original strand, 42179877 - 42179952
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagat 590  Q
    |||||| ||||||||||||||||||| |||||||| |||  ||||||| || | |||||||||||||| |||||||    
T  42179877 tggtgagttgtttgtgtgaacatatgcattgttgttgagtcatatgttcatgcatacatgactgatggagacagat 42179952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 7320611 - 7320557
Alignment:
Q  146 tatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctca 200  Q
    ||||||| ||||||||||||| ||||| |||||| ||||||||||| ||||||||    
T  7320611 tatacatagtcgaggccctagagtttatatacttggttttggttcatttgtctca 7320557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 618 - 655
Target Start/End: Complemental strand, 17203329 - 17203292
Alignment:
Q  618 tgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  17203329 tgtgaacatatgcattgttgttgagtcatatgttcatg 17203292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 618 - 655
Target Start/End: Original strand, 28032497 - 28032534
Alignment:
Q  618 tgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  28032497 tgtgaacatatgcattgttgttgagtcatatgttcatg 28032534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 618 - 655
Target Start/End: Complemental strand, 32464662 - 32464625
Alignment:
Q  618 tgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  32464662 tgtgaacatatgcattgttgttgagtcatatgttcatg 32464625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 366 - 426
Target Start/End: Original strand, 24827805 - 24827865
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaat 426  Q
    ||||||| |||| |||||||||||| |||| ||||||||||||  ||||||||| ||||||    
T  24827805 ttacttggaataggagaattgtttgaaatggtgaaactatatgtgatagttgatgttgaat 24827865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 619 - 655
Target Start/End: Complemental strand, 25593835 - 25593799
Alignment:
Q  619 gtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||||||||||||||| |||||||||||||||||||||    
T  25593835 gtgaacatatgcattattgtcgagtcatatgttcatg 25593799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 527 - 590
Target Start/End: Complemental strand, 32464665 - 32464601
Alignment:
Q  527 ttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagat 590  Q
    ||||||||||||||| |||||||| |||  ||||||| || | ||||||||||||||||||||||    
T  32464665 ttgtgtgaacatatgcattgttgttgagtcatatgttcatgcatacatgactgatggtgacagat 32464601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 216
Target Start/End: Original strand, 19434481 - 19434544
Alignment:
Q  154 gtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgta 216  Q
    ||||||||||||| ||||| |||||| ||||||||||| ||||||| ||| ||||| |||||||    
T  19434481 gtcgaggccctagagtttatatacttggttttggttcatttgtctcaattattttagagttgta 19434544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 23822577 - 23822616
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgt 43  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  23822577 taaccatctaggggtgcttttatgaaagaaataactttgt 23822616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 23831656 - 23831695
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgt 43  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  23831656 taaccatctaggggtgcttttatgaaagaaataactttgt 23831695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 24841062 - 24840996
Alignment:
Q  154 gtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgtaaaa 219  Q
    ||||||||||||| |||||  || || ||||||||||||||||||| ||| |||||||||| |||||    
T  24841062 gtcgaggccctagagtttatttaattggttttggttcaattgtctcaattattttaaagttctaaaa 24840996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 43641986 - 43641916
Alignment:
Q  147 atacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgta 216  Q
    |||||| ||||||||||||| ||||| |||||| ||||| ||||| ||||||| ||| ||||| |||||||    
T  43641986 atacatagtcgaggccctagagtttatatacttggtttttgttcatttgtctcaattattttagagttgta 43641916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 419
Target Start/End: Original strand, 3800350 - 3800402
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgat 419  Q
    ||||||| ||||||||||| | ||| |||| |||||||||||||||||||||||    
T  3800350 ttacttggaatatgagaat-gcttgaaatggtgaaactatatgatatagttgat 3800402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 419
Target Start/End: Original strand, 14907675 - 14907727
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgat 419  Q
    ||||||| ||||||||||| | ||| |||| |||||||||||||||||||||||    
T  14907675 ttacttggaatatgagaat-gcttgaaatggtgaaactatatgatatagttgat 14907727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 419
Target Start/End: Complemental strand, 20014042 - 20013990
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgat 419  Q
    ||||||| ||||||||||| | ||| |||| |||||||||||||||||||||||    
T  20014042 ttacttggaatatgagaat-gcttgaaatggtgaaactatatgatatagttgat 20013990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 419
Target Start/End: Complemental strand, 23819099 - 23819047
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgat 419  Q
    ||||||| ||||||||||| | ||| |||| |||||||||||||||||||||||    
T  23819099 ttacttggaatatgagaat-gcttgaaatggtgaaactatatgatatagttgat 23819047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 6477859 - 6477899
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||||||| |||||||||| |||||||||||| |||||    
T  6477859 taaccatctagagatgtttttaggaaagaaataacgttgta 6477899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 24088199 - 24088235
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  24088199 catctaggggtgtttttatgaaagaaataattttgta 24088235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 146; Significance: 1e-76; HSPs: 58)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 435 - 655
Target Start/End: Complemental strand, 19671340 - 19671119
Alignment:
Q  435 tgaaatgttggtgggttcatatatgacatgtgatgatggactattagtggatgcatatatgctaattgtttggtgagattctggtgaattgtttgtgtga 534  Q
    |||| |||||||| || ||||||||||||||||||||| | | || ||| ||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  19671340 tgaattgttggtgagtgcatatatgacatgtgatgatgaattgttggtgaatgcatatatgctaagtgtttggtgagattgtggtgaattgtttgtgtga 19671241  T
Q  535 acatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaatgtagagaatggtttatgtgaacatatgcatt 633  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||| ||||| | ||||||||| ||||||||||||||||    
T  19671240 acatatgtattgttgttgagatatatgtttatacatacatgactgatggtgacggattttatatctaatgtggtgaatggtttgtgtgaacatatgcatt 19671141  T
Q  634 gttgtcgagtcatatgttcatg 655  Q
    |||||||||| |||||||||||    
T  19671140 gttgtcgagttatatgttcatg 19671119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 452 - 655
Target Start/End: Original strand, 31468869 - 31469073
Alignment:
Q  452 catatatgacatgtgatgatggactattagtggatgcatatatgctaattgtttggtgagattctggtgaattgtttgtgtgaacatatgtattgttg-t 550  Q
    |||||||||||| |||||||| | | || ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |    
T  31468869 catatatgacatatgatgatgaattgttggtgaatgcatatatgctaattgtttggtgagattgtggtgaattgtttgtgtgaacatatgtattgttgtt 31468968  T
Q  551 gagatatatgtttatacgtacatgactgatggtgacagattttatatccaatgtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgt 650  Q
    ||||||||||||||||| ||||||||||||||||||  |||||||||||||| | | ||||||||| ||||||||||  |||||||||||||||||||||    
T  31468969 gagatatatgtttatacatacatgactgatggtgacgaattttatatccaatttggtgaatggtttgtgtgaacatagacattgttgtcgagtcatatgt 31469068  T
Q  651 tcatg 655  Q
    |||||    
T  31469069 tcatg 31469073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 429 - 655
Target Start/End: Original strand, 940462 - 940689
Alignment:
Q  429 tgatgatgaaatgttggtgggttcatatatgacatgtgatgatggactattagtggatgcatatatgctaattgtttggtgagattctggtgaattgttt 528  Q
    ||||| ||||||||||||  || | |||||||||||||| |||||| | |   || |||||||||| |||| |||||||||||||| |||||||||||||    
T  940462 tgatggtgaaatgttggtaagtgcgtatatgacatgtgaagatggattgtggatgaatgcatatattctaagtgtttggtgagattgtggtgaattgttt 940561  T
Q  529 gtgtgaacatatgtattgttg-tgagatatatgtttatacgtacatgactgatggtgacagattttatatccaatgtagagaatggtttatgtgaacata 627  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||| ||||| ||||||||||| | || |||||| ||||||||||    
T  940562 gtgtgaacatatgtattgttgatgagatatatgtttatacatacatgactgatgatgacggatttcatatccaatgtggtgattggtttgtgtgaacata 940661  T
Q  628 tgcattgttgtcgagtcatatgttcatg 655  Q
    ||||||||||||||||||||||||||||    
T  940662 tgcattgttgtcgagtcatatgttcatg 940689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 516 - 655
Target Start/End: Original strand, 17084743 - 17084883
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaatgtagagaatggt 614  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||| | ||||||| |||| ||||| ||||||||||||||||| | |||||||    
T  17084743 tggtgaattgtttatgtgaacatatgtattgttgttgagatatatgtttatgcatacatgaatgattgtgacggattttatatccaatgtggtgaatggt 17084842  T
Q  615 ttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  17084843 ttgtgtgaacatatgcattgttgtcgagtcatatgttcatg 17084883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 504 - 655
Target Start/End: Complemental strand, 19628126 - 19627974
Alignment:
Q  504 ttggtgagattctggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    ||||||||| | ||||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||||||||||||||||| |||||||||||||||    
T  19628126 ttggtgagaatatggtgaattgtttgtatgaacatatgtattgttgttgagatatatgtttatgcatacatgactgatggtgacggattttatatccaat 19628027  T
Q  603 gtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    || | || | |||| |||||||||||| ||||||||  |||||||||||||||    
T  19628026 gtggtgagttgtttgtgtgaacatatgtattgttgttaagtcatatgttcatg 19627974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 504 - 655
Target Start/End: Original strand, 35010682 - 35010834
Alignment:
Q  504 ttggtgagattctggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    ||||||||| | ||||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||||||||||||||||| ||||||||||| |||    
T  35010682 ttggtgagaatatggtgaattgtttgtatgaacatatgtattgttgttgagatatatgtttatgcatacatgactgatggtgacggattttatatcaaat 35010781  T
Q  603 gtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
     | | || | |||| ||||||||||||||||||||| ||||||||||||||||    
T  35010782 atggtgagttgtttgtgtgaacatatgcattgttgttgagtcatatgttcatg 35010834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 520 - 651
Target Start/End: Original strand, 17084658 - 17084790
Alignment:
Q  520 gaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaatgtagagaatggtttat 618  Q
    |||||||||||||||||||||| |||||||| |||| |||||||||| | |||||||||||||||||||||||||||||||||||| | |||| ||||||    
T  17084658 gaattgtttgtgtgaacatatgcattgttgttgagacatatgtttatgcatacatgactgatggtgacagattttatatccaatgtggtgaattgtttat 17084757  T
Q  619 gtgaacatatgcattgttgtcgagtcatatgtt 651  Q
    ||||||||||| |||||||| |||  |||||||    
T  17084758 gtgaacatatgtattgttgttgagatatatgtt 17084790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 518 - 655
Target Start/End: Original strand, 22594886 - 22595024
Alignment:
Q  518 gtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaatgtagagaatggttt 616  Q
    |||||||||||||||||||||||| | |||||| |||| | |||||||| | |||||||||||||||||| |||||||||||||||||   ||||| |||    
T  22594886 gtgaattgtttgtgtgaacatatgcaatgttgttgagacaaatgtttatgcatacatgactgatggtgacggattttatatccaatgtgttgaatgattt 22594985  T
Q  617 atgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
     ||| ||||||||||||||||||||||||||||||||||    
T  22594986 gtgtaaacatatgcattgttgtcgagtcatatgttcatg 22595024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 8 - 172
Target Start/End: Original strand, 15735759 - 15735930
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtgttac--ttg----actttaa-tgaagtgagttggcctat 100  Q
    |||||||||||||||||||| ||| |||| ||||||| |||||||||| ||||||||||||||    |||    |||| || | ||||||||||||||||    
T  15735759 catctagggatgtttttatggaaggaatagctttgtattaagggcttactgagtccttgtgttttctttgcaaaacttgaacttaagtgagttggcctat 15735858  T
Q  101 gagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgttta 172  Q
    || ||||||||||||||| ||||| |||||||||| |||||||||||||||| || |||| ||||| |||||    
T  15735859 gaaacgttgatgtatacattactgcactcatatgtgatttgtgtatatacatggttgaggtcctagagttta 15735930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 16231080 - 16230993
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgttta 172  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||| || |||| ||||| |||||    
T  16231080 aagtgagttggcctatgaaacgttgatgtatacactactgcactcatatgtgatttgtgtatatacatggttgaggtcctagagttta 16230993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 16231196 - 16231117
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatgaa 86  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| || |||||||||||||||    
T  16231196 catctagggatgtttttatgaaagaaatagctttgtattaagggcttagtgagtccttgtgttttcttgactttaatgaa 16231117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 18003636 - 18003723
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgttta 172  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||| || |||| ||||| |||||    
T  18003636 aagtgagttggcctatgaaacgttgatgtatacactactgcactcatatgtgatttgtgtatatacatggttgaggtcctagggttta 18003723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 232 - 437
Target Start/End: Complemental strand, 22847206 - 22847000
Alignment:
Q  232 tttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatga-tgacttgctagatgttgt 330  Q
    |||||||| ||  ||||| |||||| ||||||||||| |||||| ||||  |  ||||| ||||||||||||||||| ||| ||| ||| || ||||||     
T  22847206 tttatcgggaatggttctcttaagccaattatcttatgatctttcgtgactaaacttatatgactaaatgaagatgtttgaatgaattgttatatgttgg 22847107  T
Q  331 ataagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatgttg 430  Q
    ||| |||||| |||||||| || ||  || |||| ||||||  |||||||||| | |||||| || |||||||||||||| |||||||| ||||||| ||    
T  22847106 atatgatatttatcataagttgttgtattttctctttactttgaatatgagaaatatttggagtggtgaaactatatgatgtagttgatgttgaatgatg 22847007  T
Q  431 atgatga 437  Q
     ||||||    
T  22847006 ttgatga 22847000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 23976959 - 23976894
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  23976959 aagtgagttggcctatgaaacgttgatgtatacactactgcactcatatgtgatttgtgtatatac 23976894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 23977073 - 23976996
Alignment:
Q  9 atctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatga 85  Q
    ||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||||    
T  23977073 atctagggatgtttttatggaagaaatagctttgtattaagggcttagtgagtccttgtgttttcttgactttaatga 23976996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 13621777 - 13621864
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgttta 172  Q
    |||||||||||||||||| ||||| ||||||||||||||| |||||||||| | |||||||||||||| || |||| ||||| |||||    
T  13621777 aagtgagttggcctatgaaacgttaatgtatacactactgcactcatatgtgacttgtgtatatacatggttgaggtcctagagttta 13621864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 16230508 - 16230447
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  16230508 ttacttggaatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 16230447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 18004209 - 18004270
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  18004209 ttacttggaatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 18004270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 85 - 147
Target Start/End: Complemental strand, 25650347 - 25650285
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtata 147  Q
    |||||| ||||||||||||||||||||||||||||||||| || ||||||| |||||||||||    
T  25650347 aagtgaattggcctatgagacgttgatgtatacactactgcacccatatgtgatttgtgtata 25650285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 13622349 - 13622410
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||| || |||||||    
T  13622349 ttacttggaatatgagaattgtttggaatggtgaaactatatgatatagttaatgttgaatg 13622410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 15736417 - 15736478
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||| ||||| ||||||||||||||||||||||| |||||||    
T  15736417 ttacttggaatatgagaattgttttgaatggtgaaactatatgatatagttgatgttgaatg 15736478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 23221200 - 23221135
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    |||||||||||||||||| | ||||||||||||||||||  |||||||||| ||||||||||||||    
T  23221200 aagtgagttggcctatgaaaagttgatgtatacactactacactcatatgtgatttgtgtatatac 23221135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 23976495 - 23976434
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| ||||||||||| ||||||||||| |||||||    
T  23976495 ttacttggaatatgagaattgtttggaatggtgaaactatatcatatagttgatgttgaatg 23976434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 25174480 - 25174419
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  25174480 ttacttgggatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 25174419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 27655323 - 27655384
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  27655323 ttacttgggatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 27655384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 258 - 410
Target Start/End: Original strand, 35137122 - 35137272
Alignment:
Q  258 aattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatgatgacttgctagatgttgtataagatattgatcataagatggtggg 357  Q
    |||| ||||||||||||| ||||  ||||||||||| |||||||||| ||| |||||| ||| ||||||||| ||| |||| | ||| | ||||| ||      
T  35137122 aattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaattg-tagatgttgaatatgatacttatcctgagatgttgta 35137220  T
Q  358 ttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgat 410  Q
    || |||| ||||||| |||||||||| | |||| |||| ||||||||||||||    
T  35137221 ttttctc-ttacttggaatatgagaaatatttgaaatggtgaaactatatgat 35137272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 13621661 - 13621740
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatgaa 86  Q
    |||||||||||||||||||| |||||||| ||| ||| |||||||||||||||||||| || || |||||| ||||||||    
T  13621661 catctagggatgtttttatggaagaaatagcttcgtattaagggcttagtgagtccttttgttttcttgaccttaatgaa 13621740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 516 - 602
Target Start/End: Original strand, 17084832 - 17084919
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    |||||||| ||||||||||||||||| |||||||| |||  ||||||| || | | ||||||||||||||||||||||||| ||||||    
T  17084832 tggtgaatggtttgtgtgaacatatgcattgttgtcgagtcatatgttcatgcattcatgactgatggtgacagattttatttccaat 17084919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 18003521 - 18003600
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatgaa 86  Q
    |||||||||||||||||||| |||||||| ||||||| ||||||||||||||| | ||||| || ||||||| |||||||    
T  18003521 catctagggatgtttttatggaagaaatagctttgtattaagggcttagtgagcctttgtgttttcttgactataatgaa 18003600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 25650469 - 25650382
Alignment:
Q  1 tcttaaccatctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtgttacttgactttaatgaagt 88  Q
    |||||||||||||||| || ||||||||||||||||||||||||  ||||| |||  |||| ||||||||  ||||||||| ||||||    
T  25650469 tcttaaccatctaggggtgcttttatgaaagaaataactttgtacaaagggtttatcgagttcttgtgttgtttgactttagtgaagt 25650382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 14627846 - 14627907
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||  ||||||||| ||||||||||||||||||||||| |||||||    
T  14627846 ttacttggaatatgagaatgttttggaatggtgaaactatatgatatagttgatgttgaatg 14627907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 516 - 602
Target Start/End: Original strand, 940638 - 940725
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    |||||| | ||||||||||||||||| |||||||| |||  ||||||| || | | ||||||||||||||||||||| ||||||||||    
T  940638 tggtgattggtttgtgtgaacatatgcattgttgtcgagtcatatgttcatgcattcatgactgatggtgacagattctatatccaat 940725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 516 - 602
Target Start/End: Complemental strand, 19671170 - 19671083
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    |||||||| ||||||||||||||||| |||||||| ||| |||||||| || | | |||||||| | ||||| |||||||||||||||    
T  19671170 tggtgaatggtttgtgtgaacatatgcattgttgtcgagttatatgttcatgcattcatgactgttcgtgacggattttatatccaat 19671083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 17857429 - 17857503
Alignment:
Q  146 tatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgtaaaa 219  Q
    ||||||| ||||||||||||| |||||  ||||| ||||||||||| ||||||| ||| ||||||||||||||||    
T  17857429 tatacatagtcgaggccctagagtttatttacttggttttggttcatttgtctcaattattttaaagttgtaaaa 17857503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 16827112 - 16827173
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||  ||||||||| |||||||    
T  16827112 ttacttgaaatatgagaattgtttgaaatggtgaaactatatgtgatagttgatgttgaatg 16827173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 415 - 500
Target Start/End: Original strand, 17014926 - 17015011
Alignment:
Q  415 ttgatattgaatgttgatgatgaaatgttggtgggttcatatatgacatgtgatgatggactattagtggatgcatatatgctaat 500  Q
    ||||||||||||| |  || |||| |||||||| || |||||||||||||||||| || | | |||||| ||||||||||||||||    
T  17014926 ttgatattgaatgattgtggtgaattgttggtgagtgcatatatgacatgtgatggtgaattgttagtgaatgcatatatgctaat 17015011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 18824997 - 18825058
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||  ||||||||| |||||||    
T  18824997 ttacttggaatatgagaattgtttgaaatggtgaaactatatgtgatagttgatgttgaatg 18825058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 10974149 - 10974097
Alignment:
Q  92 ttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgt 144  Q
    ||||||||||||||||  ||||||||||||||| |||||||||||| ||||||    
T  10974149 ttggcctatgagacgtatatgtatacactactgcactcatatgtaacttgtgt 10974097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 366 - 426
Target Start/End: Original strand, 18843057 - 18843117
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaat 426  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||  ||||||||| ||||||    
T  18843057 ttacttggaatatgagaattgtttgaaatggtgaaactatatgtgatagttgatgttgaat 18843117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 217
Target Start/End: Complemental strand, 23220972 - 23220900
Alignment:
Q  146 tatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgtaa 217  Q
    ||||||| |||||| |||||| |||||  ||||| ||||||||||||||||||| ||| ||||||||||||||    
T  23220972 tatacatagtcgagaccctagagtttatttacttggttttggttcaattgtctcaattattttaaagttgtaa 23220900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 246 - 329
Target Start/End: Complemental strand, 25650194 - 25650110
Alignment:
Q  246 ttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatg-atgacttgctagatgttg 329  Q
    |||||| |||| ||||| ||| |||||||||||||  |||||||| ||||||||||||||||| || |||| ||| |||||||||    
T  25650194 ttctttaaagccaattaccttttaatcttttgtgaatagccttatatgactaaatgaagatgtgtgaatgaattgttagatgttg 25650110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 246 - 424
Target Start/End: Complemental strand, 34965993 - 34965813
Alignment:
Q  246 ttcttttaagctaattatcttataa-tcttttgtgatcagccttatgtgactaaatgaagatgtatga-tgacttgctagatgttgtataagatattgat 343  Q
    |||||| |||| ||||| ||||||| ||||| ||||  ||| |||| ||| ||||||||||| | | | ||| ||| ||||||||| ||| |||||| ||    
T  34965993 ttctttaaagccaattaccttataaatctttcgtgactagctttatatgattaaatgaagatatgtaaatgaattgttagatgttgaatatgatatttat 34965894  T
Q  344 cataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattga 424  Q
    |||||| || |   || |||| ||||||| |||||||||| |||||||| || ||  ||||||| ||||||||||| ||||    
T  34965893 cataaggtgttttattttctctttacttggaatatgagaagtgtttggagtggtgggactatattatatagttgatgttga 34965813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 516 - 590
Target Start/End: Original strand, 35010783 - 35010858
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagat 590  Q
    |||||| ||||||||||||||||||| |||||||| |||  ||||||| || | |||||||||||||| |||||||    
T  35010783 tggtgagttgtttgtgtgaacatatgcattgttgttgagtcatatgttcatgcatacatgactgatggagacagat 35010858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 613 - 655
Target Start/End: Complemental strand, 14151251 - 14151209
Alignment:
Q  613 gtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    |||| ||||||||||||||||||||| ||||||||||||||||    
T  14151251 gtttgtgtgaacatatgcattgttgttgagtcatatgttcatg 14151209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 426
Target Start/End: Complemental strand, 19853212 - 19853079
Alignment:
Q  293 gactaaatgaagatgtatga-tgacttgctagatgttgtataagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgtttgg 391  Q
    |||||||||||||||| ||| ||| ||| ||  ||||| ||| |||||| |||||| | || ||  || |||| ||||||| |||||||||| |  ||||    
T  19853212 gactaaatgaagatgtgtgaatgaattgttaagtgttggatatgatatttatcatagggtgttgtattttctc-ttacttgaaatatgagaagtacttgg 19853114  T
Q  392 aatgatgaaactatatgatatagttgatattgaat 426  Q
    | |||||||||||||| || |||||||||||||||    
T  19853113 agtgatgaaactatattatgtagttgatattgaat 19853079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 26506037 - 26505944
Alignment:
Q  126 actcatatgtaatttgtgtatatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgtaaaa 219  Q
    |||||||||| || |  |||||||||||||||||||||||| |||||  ||||| ||||||| || |||||||| ||| | ||||||||||||||    
T  26506037 actcatatgtgatctaagtatatacattgtcgaggccctagagtttatttacttggttttggctc-attgtctcaattatattaaagttgtaaaa 26505944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 366 - 419
Target Start/End: Complemental strand, 4989823 - 4989770
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgat 419  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||  |||||||||    
T  4989823 ttacttggaatatgagaattgtttgaaatggtgaaactatatgtgatagttgat 4989770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 503 - 601
Target Start/End: Complemental strand, 14151273 - 14151173
Alignment:
Q  503 tttggtgagattctggtgaattgtttgtgtgaacatatgtattgttg-tgagatatatgtttatacgtacatgactgatggtgacaga-ttttatatcca 600  Q
    |||||||||| | |||||| ||||||||||||||||||| ||||||| ||||  ||||||| || | |||||||||  ||| ||| || |||||||||||    
T  14151273 tttggtgagaatatggtgagttgtttgtgtgaacatatgcattgttgttgagtcatatgttcatgcatacatgactagtggagacggatttttatatcca 14151174  T
Q  601 a 601  Q
    |    
T  14151173 a 14151173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 258 - 410
Target Start/End: Complemental strand, 33323809 - 33323659
Alignment:
Q  258 aattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatgatgacttgctagatgttgtataagatattgatcataagatggtggg 357  Q
    |||| ||||||||||||| ||||  ||||||||||| |||||||||| ||| |||||| ||| ||||||| | ||| |||| | ||| | ||||| ||      
T  33323809 aattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaattg-tagatgtggaatatgatacttatcttgagatgttgta 33323711  T
Q  358 ttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgat 410  Q
    ||  ||| ||||||| |||||||||| | |||| || | ||||||||||||||    
T  33323710 tttcctc-ttacttggaatatgagaaatatttgaaacggtgaaactatatgat 33323659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 5485357 - 5485412
Alignment:
Q  92 ttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtata 147  Q
    |||||||||||||| ||  |||||| ||||||| |||||||||| |||||||||||    
T  5485357 ttggcctatgagacatttgtgtatatactactgcactcatatgtgatttgtgtata 5485412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 4172635 - 4172677
Alignment:
Q  178 ttagttttggttcaattgtctc-attgttttaaagttgtaaaa 219  Q
    |||||||||||||||||||||| ||||| ||||||||||||||    
T  4172635 ttagttttggttcaattgtctcaattgtgttaaagttgtaaaa 4172677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 4228244 - 4228286
Alignment:
Q  178 ttagttttggttcaattgtctc-attgttttaaagttgtaaaa 219  Q
    |||||||||||||||||||||| ||||| ||||||||||||||    
T  4228244 ttagttttggttcaattgtctcaattgtgttaaagttgtaaaa 4228286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 312
Target Start/End: Original strand, 22363321 - 22363383
Alignment:
Q  250 tttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatga 312  Q
    |||||| ||||||| |||| |||||||||||  ||| | || |||||||||||||||||||||    
T  22363321 tttaagttaattatattatgatcttttgtgactagcttcatatgactaaatgaagatgtatga 22363383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 602
Target Start/End: Original strand, 22594983 - 22595060
Alignment:
Q  526 tttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    ||||||| |||||||| |||||||| |||  ||||||| || | | ||||||||| ||||||||| ||||||||||||    
T  22594983 tttgtgtaaacatatgcattgttgtcgagtcatatgttcatgcattcatgactgaaggtgacagaatttatatccaat 22595060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 618 - 655
Target Start/End: Complemental strand, 27739788 - 27739751
Alignment:
Q  618 tgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  27739788 tgtgaacatatgcattgttattgagtcatatgttcatg 27739751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 419
Target Start/End: Original strand, 33315819 - 33315871
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgat 419  Q
    ||||||| ||||||||||| ||| | |||| |||||||||||||||||||||||    
T  33315819 ttacttggaatatgagaatggtt-gaaatggtgaaactatatgatatagttgat 33315871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 5110338 - 5110378
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||||||| |||||||||| |||||||||||| |||||    
T  5110338 taaccatctagagatgtttttaggaaagaaataaccttgta 5110378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 258 - 306
Target Start/End: Original strand, 29161456 - 29161504
Alignment:
Q  258 aattatcttataatcttttgtgatcagccttatgtgactaaatgaagat 306  Q
    ||||| ||||||||||||||| |  ||| ||||||||||||||||||||    
T  29161456 aattaccttataatcttttgtaaatagctttatgtgactaaatgaagat 29161504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 142; Significance: 3e-74; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 415 - 655
Target Start/End: Original strand, 13448333 - 13448574
Alignment:
Q  415 ttgatattgaatgttgatgatgaaatgttggtgggttcatatatgacatgtgatgatggactattagtggatgcatatatgctaattgtttggtgagatt 514  Q
    ||||||||||||| |  || |||| |||||||| || |||||||||||||| ||| || | | || ||| ||||||||||||||| ||||||||||||||    
T  13448333 ttgatattgaatgattgtggtgaattgttggtgagtgcatatatgacatgtaatggtgaattgttggtgaatgcatatatgctaagtgtttggtgagatt 13448432  T
Q  515 ctggtgaattgtttgtgtgaacatatgtattgttg-tgagatatatgtttatacgtacatgactgatggtgacagattttatatccaatgtagagaatgg 613  Q
     ||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |  |||||    
T  13448433 gtggtgaattgtttgtgtaaacatatgtattgttgatgagatatatgtttatacatacatgactgatggtgacggattttatatccaatgtggtaaatgg 13448532  T
Q  614 tttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||| ||||||||||||||||||||||||||||||||||||||    
T  13448533 tttgtgtgaacatatgcattgttgtcgagtcatatgttcatg 13448574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 485 - 655
Target Start/End: Original strand, 40902079 - 40902250
Alignment:
Q  485 atgcatatatgctaattgtttggtgagattctggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggt 583  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  40902079 atgcatatatgctaagtgtttggtgagattgtggtgaattgtttgtatgaacatatgtattgttgttgagatatatgtttatacatacatgactgatggt 40902178  T
Q  584 gacagattttatatccaatgtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
     || ||||||||||||||||  | ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  40902179 tacggattttatatccaatgcggtgaatggtttgtgtgaacatatgcattgttgtcgagtcatatgttcatg 40902250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 516 - 655
Target Start/End: Original strand, 41918176 - 41918316
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaatgtagagaatggt 614  Q
    ||||||||| |||||||||||||||| |||||||| ||||||||||||||| | |||||||||||||||||| |||||||||||||| |||| |||||||    
T  41918176 tggtgaattatttgtgtgaacatatgcattgttgttgagatatatgtttatgcatacatgactgatggtgacggattttatatccaaagtagtgaatggt 41918275  T
Q  615 ttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  41918276 ttgtgtgaacatatgcattgttgtcgagtcatatgttcatg 41918316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 415 - 602
Target Start/End: Original strand, 7965982 - 7966170
Alignment:
Q  415 ttgatattgaatgttgatgatgaaatgttggtgggttcatatatgacatgtgatgatggactattagtggatgcatatatgctaattgtttggtgagatt 514  Q
    ||||||||||||| ||||| ||||||||||||| || ||||||||||||||||||||||| | || ||| |||||||||||| || | ||||||||||||    
T  7965982 ttgatattgaatgatgatggtgaaatgttggtgagtgcatatatgacatgtgatgatggattgttggtgaatgcatatatgccaagtatttggtgagatt 7966081  T
Q  515 ctggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
     |||||||| ||||||||||||||||| |||||||| |||  ||||||| || | | |||||||||||||||| |||||||||||||||    
T  7966082 gtggtgaatggtttgtgtgaacatatgcattgttgtcgagtcatatgttcatgcattcatgactgatggtgacggattttatatccaat 7966170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 504 - 655
Target Start/End: Original strand, 19698978 - 19699130
Alignment:
Q  504 ttggtgagattctggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    ||||||||| | ||||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||||||||||||||||| |||||||||||||||    
T  19698978 ttggtgagaatatggtgaattgtttgtatgaacatatgtattgttgttgagatatatgtttatgcatacatgactgatggtgacggattttatatccaat 19699077  T
Q  603 gtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    || | || | |||| |||||||||||| |||||||| ||||||||||||||||    
T  19699078 gtggtgagttgtttgtgtgaacatatgtattgttgttgagtcatatgttcatg 19699130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 504 - 655
Target Start/End: Original strand, 19709563 - 19709715
Alignment:
Q  504 ttggtgagattctggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    ||||||||| | ||||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||||||||||||||||| |||||||||||||||    
T  19709563 ttggtgagaatatggtgaattgtttgtatgaacatatgtattgttgttgagatatatgtttatgcatacatgactgatggtgacggattttatatccaat 19709662  T
Q  603 gtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    || | || | |||| |||||||||||| |||||||| ||||||||||||||||    
T  19709663 gtggtgagttgtttgtgtgaacatatgtattgttgttgagtcatatgttcatg 19709715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 259 - 427
Target Start/End: Original strand, 7187046 - 7187215
Alignment:
Q  259 attatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatgatgacttgctagatgttgtataagatattgatcataagatggtgggt 358  Q
    ||||||||||||||||| ||||  |||||||| |||||| |||||| ||| |||||| ||| ||||||||| ||| |||||||||||||||||| || ||    
T  7187046 attatcttataatctttcgtgactagccttatatgactagatgaaggtgtgtgatgaattgttagatgttggatatgatattgatcataagatgttgtgt 7187145  T
Q  359 tatctcgttacttgtaatatgagaattgtttggaatgatg-aaactatatgatatagttgatattgaatg 427  Q
    | |||||||| |||||| ||||||| | |||| |||| || ||||||||||||||||||||| |||||||    
T  7187146 tttctcgttatttgtaacatgagaaatatttgaaatggtgaaaactatatgatatagttgatgttgaatg 7187215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 229 - 427
Target Start/End: Original strand, 15014369 - 15014568
Alignment:
Q  229 gactttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatga-tgacttgctagatgt 327  Q
    |||||||||||||   |||||||||||| |||||||||||  |||||  |||  |||||||| ||||||||||||||||| ||| ||| ||| || ||||    
T  15014369 gactttatcggaattggttcttttaagccaattatcttatggtctttcttgactagccttatatgactaaatgaagatgtgtgaatgaattgttatatgt 15014468  T
Q  328 tgtataagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    || ||| |||||| |||||||| || ||  || |||| ||||||| |||||||||| | |||||| || |||||||||||||| |||||||| |||||||    
T  15014469 tggatatgatatttatcataagttgttgtattttctctttacttggaatatgagaaatatttggagtggtgaaactatatgatgtagttgatgttgaatg 15014568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 504 - 655
Target Start/End: Original strand, 55378142 - 55378292
Alignment:
Q  504 ttggtgagattctggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    ||||||||||| || |||||||||||| ||||||||| |||| |||| ||| ||||||||||| | |||||||||||||||||| |||| ||||||||||    
T  55378142 ttggtgagattgtg-tgaattgtttgtatgaacatatttattattgttgaggtatatgtttatgcatacatgactgatggtgacggattgtatatccaat 55378240  T
Q  603 gtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    || | || |   || ||||||||||||||||||||| |||||||| |||||||    
T  55378241 gtggtgagt-tattgtgtgaacatatgcattgttgttgagtcatacgttcatg 55378292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 7133113 - 7133200
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgttta 172  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||| || |||| ||||| |||||    
T  7133113 aagtgagttggcctatgaaacgttgatgtatacactactgcactcatatgtgatttgtgtatatacatggttgaggtcctagagttta 7133200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 15273423 - 15273510
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgttta 172  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||| || |||| ||||| |||||    
T  15273423 aagtgagttggcctatgaaacgttgatgtatacactactgcactcatatgtgatttgtgtatatacatggttgaggtcctagagttta 15273510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 19999912 - 19999825
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgttta 172  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||| || |||| ||||| |||||    
T  19999912 aagtgagttggcctatgaaacgttgatgtatacactactgcactcatatgtgatttgtgtatatacatggttgaggtcctagagttta 19999825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 550 - 651
Target Start/End: Original strand, 41918122 - 41918223
Alignment:
Q  550 tgagatatatgtttatacgtacatgactgatggtgacagattttatatccaatgtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatg 649  Q
    |||||||||||||||| | ||||||| |||||||||| ||||||||||||||||| | ||||  ||| ||||||||||||||||||||| |||  |||||    
T  41918122 tgagatatatgtttatgcatacatgattgatggtgacggattttatatccaatgtggtgaattatttgtgtgaacatatgcattgttgttgagatatatg 41918221  T
Q  650 tt 651  Q
    ||    
T  41918222 tt 41918223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 7132997 - 7133076
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatgaa 86  Q
    |||||||||||||||||||| |||||||| ||| ||| ||||||||||||||||||||||| || |||||||||||||||    
T  7132997 catctagggatgtttttatggaagaaatagcttcgtattaagggcttagtgagtccttgtgttttcttgactttaatgaa 7133076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 15273307 - 15273386
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatgaa 86  Q
    ||||||||| |||||||||||||||| || ||||||| ||||||||||||||||||||||| || |||||||||||||||    
T  15273307 catctaggggtgtttttatgaaagaattagctttgtattaagggcttagtgagtccttgtgttttcttgactttaatgaa 15273386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 15273996 - 15274057
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  15273996 ttacttggaatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 15274057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 15288246 - 15288307
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  15288246 ttacttggaatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 15288307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 15295356 - 15295417
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  15295356 ttacttggaatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 15295417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 20000026 - 19999965
Alignment:
Q  9 atctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtgtt 70  Q
    ||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||    
T  20000026 atctagggatgtttttatggaagaaatagctttgtattaagggcttagtgagtccttgtgtt 19999965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 516 - 601
Target Start/End: Complemental strand, 14570101 - 14570015
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaa 601  Q
    |||||||||||||||||| ||||||| |||||||| |||  ||||||| || | |||||||||||||||||| ||||||||||||||    
T  14570101 tggtgaattgtttgtgtggacatatgcattgttgttgagtcatatgttcatgcatacatgactgatggtgacggattttatatccaa 14570015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 246 - 418
Target Start/End: Complemental strand, 18275892 - 18275721
Alignment:
Q  246 ttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatg-atgacttgctagatgttgtataagatattgatc 344  Q
    ||||||||||| ||||||||||| |||||| ||||  |||||||| |||||||||||||| || || |||| ||| || | |||| ||| |||||| |||    
T  18275892 ttcttttaagccaattatcttatgatctttcgtgactagccttatatgactaaatgaagaggtgtgaatgaattgttatacgttg-atatgatatttatc 18275794  T
Q  345 ataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttga 418  Q
    |||||||| ||  |  |||| ||||||  |||||||||| | |||||| || ||||||||| ||||||||||||    
T  18275793 ataagatgttgtatgttctc-ttacttagaatatgagaaatatttggagtggtgaaactatgtgatatagttga 18275721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 19999447 - 19999386
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| ||||||||||| ||||||||||| |||||||    
T  19999447 ttacttggaatatgagaattgtttggaatggtgaaactatatcatatagttgatgttgaatg 19999386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 518 - 602
Target Start/End: Original strand, 41918267 - 41918352
Alignment:
Q  518 gtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    |||||| ||||||||||||||||| |||||||| |||  ||||||| || | | ||||||||||||||||||||||||||||||||    
T  41918267 gtgaatggtttgtgtgaacatatgcattgttgtcgagtcatatgttcatgcattcatgactgatggtgacagattttatatccaat 41918352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 85 - 145
Target Start/End: Complemental strand, 17866286 - 17866226
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgta 145  Q
    |||||| |||||||||||||||||||||||||||||| || |||||||||| |||||||||    
T  17866286 aagtgatttggcctatgagacgttgatgtatacactaatgcactcatatgtgatttgtgta 17866226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 375 - 427
Target Start/End: Complemental strand, 18247099 - 18247047
Alignment:
Q  375 atatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  18247099 atatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 18247047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 608 - 655
Target Start/End: Original strand, 7966087 - 7966134
Alignment:
Q  608 gaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7966087 gaatggtttgtgtgaacatatgcattgttgtcgagtcatatgttcatg 7966134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 485 - 602
Target Start/End: Original strand, 13595480 - 13595599
Alignment:
Q  485 atgcatatatgctaattgtttggtgagattctggtgaattgtttgtgtgaacatatgta-ttgttg-tgagatatatgtttatacgtacatgactgatgg 582  Q
    ||||||||||| ||| |||||||||||||| ||||||||||||||||| |||||||| | |||||| ||||  ||||||| |  | | |||||||||||     
T  13595480 atgcatatatgttaagtgtttggtgagattgtggtgaattgtttgtgtaaacatatgcatttgttgttgagtcatatgttcaagcattcatgactgatga 13595579  T
Q  583 tgacagattttatatccaat 602  Q
    ||||  ||||||||||||||    
T  13595580 tgacgaattttatatccaat 13595599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 10238214 - 10238279
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    ||||||||||||||||| ||| ||||||||||||||| || |||||||||| ||| ||||||||||    
T  10238214 aagtgagttggcctatgggaccttgatgtatacactattgcactcatatgtgattggtgtatatac 10238279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 15212264 - 15212203
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| ||||||| || ||||||||||| ||||||||||||||||||||||| |||||||    
T  15212264 ttacttggaatatgataaatgtttggaatggtgaaactatatgatatagttgatgttgaatg 15212203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 517 - 601
Target Start/End: Original strand, 40902200 - 40902285
Alignment:
Q  517 ggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaa 601  Q
    ||||||| ||||||||||||||||| |||||||| |||  ||||||| || | | |||||||||||||||| ||||||||||||||    
T  40902200 ggtgaatggtttgtgtgaacatatgcattgttgtcgagtcatatgttcatgcattcatgactgatggtgacggattttatatccaa 40902285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 8373275 - 8373214
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||  ||||||||| |||||||    
T  8373275 ttacttggaatatgagaattgtttgaaatggtgaaactatatgtgatagttgatgttgaatg 8373214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 593
Target Start/End: Original strand, 19623473 - 19623586
Alignment:
Q  481 gtggatgcatatatgctaattgtttggtgagattctggtgaattgttt-gtgtgaacatatgtattgttgtgagatatatgtttatacgtacatgactga 579  Q
    |||||| |||||||||||| || |||||||   | ||||||||||||| ||||||||||||| |||||   |||  ||||||| || | |||||||||||    
T  19623473 gtggatacatatatgctaaatgattggtgatgatgtggtgaattgttttgtgtgaacatatgcattgtgtcgagtcatatgttgatgcatacatgactga 19623572  T
Q  580 tggtgacagatttt 593  Q
    |||||| |||||||    
T  19623573 tggtgaaagatttt 19623586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 229 - 427
Target Start/End: Original strand, 41257452 - 41257651
Alignment:
Q  229 gactttatcggaaaatg-ttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatg-atgacttgctagatg 326  Q
    |||||||||| |||||| ||||||||||  ||||||||||| |||||| ||||  ||||||||   ||||||||||||||| || |||| ||| || |||    
T  41257452 gactttatcg-aaaatgattcttttaagtcaattatcttatgatctttcgtgactagccttatacaactaaatgaagatgtgtgaatgaattgttatatg 41257550  T
Q  327 ttgtataagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaat 426  Q
    ||| ||| |||| | |||||||| ||  |  || || | || |||| ||||||| || | |||||| || |||||||||||||| || ||||| ||||||    
T  41257551 ttggatatgataattatcataaggtgtggcattttccctttgcttggaatatgaaaaatatttggagtggtgaaactatatgatgtatttgatgttgaat 41257650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 516 - 602
Target Start/End: Original strand, 13448523 - 13448610
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    |||| ||| ||||||||||||||||| |||||||| |||  ||||||| || | | ||||||||| ||||||||||||||||| ||||    
T  13448523 tggtaaatggtttgtgtgaacatatgcattgttgtcgagtcatatgttcatgcattcatgactgacggtgacagattttatattcaat 13448610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 26922112 - 26922190
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtgttacttgactttaa 82  Q
    ||||||||||| |||||||||| |||| |||||||||||||  |||||  || ||||| |||||||| |||||| ||||    
T  26922112 taaccatctagagatgtttttaggaaaaaaataactttgtataaagggtctaatgagttcttgtgttgcttgacattaa 26922190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 15043864 - 15043803
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||| | |||||| || |||||||||||||| |||||||| |||||||    
T  15043864 ttacttggaatatgagaaatatttggagtggtgaaactatatgatgtagttgatgttgaatg 15043803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 15110560 - 15110621
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||| | |||||| || |||||||||||||| |||||||| |||||||    
T  15110560 ttacttggaatatgagaaatatttggagtggtgaaactatatgatgtagttgatgttgaatg 15110621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 18110089 - 18110150
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||| ||||||||||||||| | || ||||||||||||||| || |||||||    
T  18110089 ttacttggaatatgggaattgtttggaatggttaagctatatgatatagttaatgttgaatg 18110150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 22355801 - 22355861
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| ||||||||||| | ||| |||| ||||||||||||||||||||||| |||||||    
T  22355801 ttacttggaatatgagaat-gcttgaaatggtgaaactatatgatatagttgatgttgaatg 22355861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 366 - 426
Target Start/End: Complemental strand, 9294445 - 9294385
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaat 426  Q
    ||||||| ||||| ||||||||||| |||| ||||||||||||  ||||||||| ||||||    
T  9294445 ttacttggaatattagaattgtttgaaatggtgaaactatatgtgatagttgatgttgaat 9294385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 619 - 655
Target Start/End: Original strand, 12346693 - 12346729
Alignment:
Q  619 gtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    |||||||||||||||||||| ||||||||||||||||    
T  12346693 gtgaacatatgcattgttgttgagtcatatgttcatg 12346729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 232 - 308
Target Start/End: Original strand, 43282475 - 43282551
Alignment:
Q  232 tttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgt 308  Q
    |||||||||||  |||||||||||| ||||||||||| |||||| ||||   ||||| | |||||||||| ||||||    
T  43282475 tttatcggaaatggttcttttaagccaattatcttatgatctttcgtgacttgccttgtatgactaaatggagatgt 43282551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 608 - 655
Target Start/End: Complemental strand, 14570097 - 14570050
Alignment:
Q  608 gaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    |||| |||| |||| |||||||||||||||| ||||||||||||||||    
T  14570097 gaattgtttgtgtggacatatgcattgttgttgagtcatatgttcatg 14570050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 10238441 - 10238515
Alignment:
Q  146 tatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgtaaaa 219  Q
    ||||||| ||||||||||||| |||||  ||||| || || ||||| ||||||| ||| ||||||||||||||||    
T  10238441 tatacatagtcgaggccctagagtttatttacttggtgttagttcatttgtctcaattattttaaagttgtaaaa 10238515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 85 - 135
Target Start/End: Original strand, 12335492 - 12335542
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgt 135  Q
    |||||| ||| ||||||||| ||| ||||||||||||||| ||||||||||    
T  12335492 aagtgaattgccctatgagatgtttatgtatacactactgcactcatatgt 12335542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 621 - 655
Target Start/End: Complemental strand, 22737332 - 22737298
Alignment:
Q  621 gaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    |||||||||||||||||| ||||||||||||||||    
T  22737332 gaacatatgcattgttgttgagtcatatgttcatg 22737298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 30233536 - 30233598
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtgtt 70  Q
    ||||||||| |||||||||||||||| |||| ||||   |||||  |||||||||||||||||    
T  30233536 catctaggggtgtttttatgaaagaattaaccttgtgtaaagggtctagtgagtccttgtgtt 30233598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 54364475 - 54364541
Alignment:
Q  154 gtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgtaaaa 219  Q
    |||||||||||||  ||||  ||||| ||||||||||| ||||||| ||| ||||||||||||||||    
T  54364475 gtcgaggccctagaatttatttacttggttttggttcatttgtctcaattattttaaagttgtaaaa 54364541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 419
Target Start/End: Complemental strand, 10487590 - 10487538
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgat 419  Q
    ||||||| ||||||||||| | ||| |||| |||||||||||||||||||||||    
T  10487590 ttacttggaatatgagaat-gcttgaaatggtgaaactatatgatatagttgat 10487538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 419
Target Start/End: Original strand, 16329161 - 16329213
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgat 419  Q
    ||||||| ||||||||||| | ||| |||| |||||||||||||||||||||||    
T  16329161 ttacttggaatatgagaat-gcttgaaatggtgaaactatatgatatagttgat 16329213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 419
Target Start/End: Complemental strand, 26678954 - 26678902
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgat 419  Q
    ||||||| ||||||||||| | ||| |||| |||||||||||||||||||||||    
T  26678954 ttacttggaatatgagaat-gcttgaaatggtgaaactatatgatatagttgat 26678902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 4615633 - 4615673
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  4615633 taaccatctagagatgtttttaggaaggaaataactttgta 4615673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 304 - 427
Target Start/End: Complemental strand, 8373441 - 8373322
Alignment:
Q  304 gatgtatgatgacttgctagatgttgtataagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaact 403  Q
    |||||||||||| | | ||||||||| ||| |||||| ||||| ||||| ||  || |||| ||||||| |||||||||||  |  |||||| |||||||    
T  8373441 gatgtatgatgaatcg-tagatgttgaatatgatatttatcatgagatgttgttttctctc-ttacttggaatatgagaatgct--ggaatggtgaaact 8373346  T
Q  404 atatgatatagttgatattgaatg 427  Q
    |||||  ||||||||| |||||||    
T  8373345 atatgtgatagttgatgttgaatg 8373322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 12134647 - 12134719
Alignment:
Q  146 tatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgtaa 217  Q
    ||||||| || |||| ||||| |||||  |||||  |||||||||||||||||| ||| ||||||||||||||    
T  12134647 tatacatagttgaggtcctagagtttatttacttgattttggttcaattgtctcaattattttaaagttgtaa 12134719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 619 - 655
Target Start/End: Original strand, 12336020 - 12336056
Alignment:
Q  619 gtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    |||||||||||||||||||| || |||||||||||||    
T  12336020 gtgaacatatgcattgttgttgattcatatgttcatg 12336056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 14933008 - 14933048
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||||||| |||||||||| |||||||||||| |||||    
T  14933008 taaccatctagagatgtttttaggaaagaaataacattgta 14933048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 15371521 - 15371481
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||||||| |||||||||| |||||||||||| |||||    
T  15371521 taaccatctagagatgtttttaggaaagaaataacgttgta 15371481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 15373802 - 15373762
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||||||| |||||||||| |||||||||||| |||||    
T  15373802 taaccatctagagatgtttttaggaaagaaataacgttgta 15373762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 27028220 - 27028180
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||||||| |||||||||| |||||||||||| |||||    
T  27028220 taaccatctagagatgtttttaggaaagaaataacgttgta 27028180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1068 (Bit Score: 133; Significance: 8e-69; HSPs: 2)
Name: scaffold1068
Description:

Target: scaffold1068; HSP #1
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 452 - 655
Target Start/End: Complemental strand, 2088 - 1884
Alignment:
Q  452 catatatgacatgtgatgatggactattagtggatgcatatatgctaattgtttggtgagattctggtgaattgtttgtgtgaacatatgtattgttgt- 550  Q
    ||||||||||||||||||||||| | || ||  ||||||| ||||||| ||||| |||||||| ||||||||||||||| |||||||||||| ||||||     
T  2088 catatatgacatgtgatgatggattgttggtaaatgcatacatgctaagtgtttagtgagattgtggtgaattgtttgtatgaacatatgtactgttgtt 1989  T
Q  551 gagatatatgtttatacgtacatgactgatggtgacagattttatatccaatgtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgt 650  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||    
T  1988 gagatatatgtttatacatacatgactgatggtgacggattttatatccaatgtagtgaatggtttgtgtgaacatatgcattgttgtcaagtcatatgt 1889  T
Q  651 tcatg 655  Q
    |||||    
T  1888 tcatg 1884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1068; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 602
Target Start/End: Complemental strand, 1933 - 1848
Alignment:
Q  518 gtgaattgtttgtgtgaacatatgtattgttgtgagat-atatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    |||||| ||||||||||||||||| |||||||| |  | ||||||| || | | ||||||||||||||||| ||||||||||||||    
T  1933 gtgaatggtttgtgtgaacatatgcattgttgtcaagtcatatgttcatgcattcatgactgatggtgacatattttatatccaat 1848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 128; Significance: 8e-66; HSPs: 3)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 485 - 655
Target Start/End: Original strand, 3072 - 3243
Alignment:
Q  485 atgcatatatgctaattgtttggtgagattctggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggt 583  Q
    |||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  3072 atgcctatatgctaagtgtttggtgagattgtggtgaattgtttgtgtgaacatatgtattgttgttgagatatatgtttatacatacatgactgatggt 3171  T
Q  584 gacagattttatatccaatgtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    |||| |||||||||||||||| | ||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  3172 gacatattttatatccaatgtggtgaatggtttgtgtgaacatatgcattgttgtagagtcatatgttcatg 3243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 415 - 500
Target Start/End: Complemental strand, 24306 - 24221
Alignment:
Q  415 ttgatattgaatgttgatgatgaaatgttggtgggttcatatatgacatgtgatgatggactattagtggatgcatatatgctaat 500  Q
    ||||||||||||| |  || |||| |||||||| || |||||||||||||||||| || | | |||||| ||||||||||||||||    
T  24306 ttgatattgaatgattgtggtgaattgttggtgagtgcatatatgacatgtgatggtgaattgttagtgaatgcatatatgctaat 24221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 602
Target Start/End: Original strand, 3192 - 3279
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    |||||||| ||||||||||||||||| |||||||| |||  ||||||| || | | ||||  ||||||||||  ||||||||||||||    
T  3192 tggtgaatggtttgtgtgaacatatgcattgttgtagagtcatatgttcatgcattcatgtttgatggtgacgaattttatatccaat 3279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 121; Significance: 1e-61; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 415 - 655
Target Start/End: Complemental strand, 36771 - 36533
Alignment:
Q  415 ttgatattgaatgttgatgatgaaatgttggtgggttcatatatgacatgtgatgatggactattagtggatgcatatatgctaattgtttggtgagatt 514  Q
    ||||||||||||| || || |||| |||||||| || ||||||||||||||| ||||| | | || ||| ||||||||||| ||| ||||||||||||||    
T  36771 ttgatattgaatgatggtggtgaattgttggtgagtgcatatatgacatgtggtgatgaattgttggtgaatgcatatatgttaagtgtttggtgagatt 36672  T
Q  515 ctggtgaattgtttgtgtgaacatatgtattgttgtgagatatatgtttatacgtacatgactgatggtgacagattttatatccaatgtagagaatggt 614  Q
     |||||||||||||||||||| |||||||||| | |  || |||||||||||| |||||||||||||| ||| ||||||||||||||||| | |||| ||    
T  36671 gtggtgaattgtttgtgtgaa-atatgtattgctatt-gagatatgtttatacatacatgactgatggcgacggattttatatccaatgtggtgaatagt 36574  T
Q  615 ttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  36573 ttgtgtgaacatatgcattgttgtcgagtcatatgttcatg 36533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 516 - 598
Target Start/End: Complemental strand, 36584 - 36501
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatc 598  Q
    |||||||| ||||||||||||||||| |||||||| |||  ||||||| || | | ||||||||||||||||||||||||||||    
T  36584 tggtgaatagtttgtgtgaacatatgcattgttgtcgagtcatatgttcatgcattcatgactgatggtgacagattttatatc 36501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 3e-59; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 485 - 655
Target Start/End: Original strand, 45468630 - 45468799
Alignment:
Q  485 atgcatatatgctaattgtttggtgagattctggtgaattgtttgtgtgaacatatgtattgttg-tgagatatatgtttatacgtacatgactgatggt 583  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||    
T  45468630 atgcatatatgctaaatgtttggtgagattgtggtgaattgtttgtgtgaacatatgtattgttgctgaaatatatgtttatacatacatgactgatggt 45468729  T
Q  584 gacagattttatatccaatgtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||| ||||||||||||||||| | ||||||  | ||| ||||||||||||||||||||||||||||||||||    
T  45468730 gacggattttatatccaatgtggtgaatgg--tgtgtaaacatatgcattgttgtcgagtcatatgttcatg 45468799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 504 - 655
Target Start/End: Complemental strand, 17500810 - 17500658
Alignment:
Q  504 ttggtgagattctggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    |||||||||||  |||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  17500810 ttggtgagattgcggtgaattgtttgtatgaacatatgtattgttgttgagatatatgtttatacatacatgactgatggtgacggattttatatccaat 17500711  T
Q  603 gtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    || | ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17500710 gtggtgaatggtttgtgtgaacatatgcattgttgtcgagtcatatgttcatg 17500658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 226 - 425
Target Start/End: Original strand, 33612157 - 33612356
Alignment:
Q  226 acggactttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatgatgacttgctagat 325  Q
    |||||||||||||||||   ||| ||| ||| |||| ||||||||||||| ||||  |||||||||||||||||||||||||| |||||| ||| | |||    
T  33612157 acggactttatcggaaatgattcattttagccaattgtcttataatctttcgtgactagccttatgtgactaaatgaagatgtgtgatgaattgttggat 33612256  T
Q  326 gttgtataagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaa 425  Q
    |||| ||| |||||||||||||||||| || ||| ||||||||||||||||||||||| | |||| ||||||||||||||||||| |||| ||| |||||    
T  33612257 gttggatatgatattgatcataagatgttgtgttttctcgttacttgtaatatgagaaatatttgaaatgatgaaactatatgatgtagtcgatgttgaa 33612356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 504 - 655
Target Start/End: Original strand, 41508466 - 41508618
Alignment:
Q  504 ttggtgagattctggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    ||||||||| | ||||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||||||||||||||||| |||||||||||||||    
T  41508466 ttggtgagaatatggtgaattgtttgtatgaacatatgtattgttgttgagatatatgtttatgcatacatgactgatggtgacggattttatatccaat 41508565  T
Q  603 gtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    || | || | |||| ||||||||||||||||||||| ||||||||||||||||    
T  41508566 gtggtgagttgtttgtgtgaacatatgcattgttgttgagtcatatgttcatg 41508618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 504 - 655
Target Start/End: Complemental strand, 18611056 - 18610904
Alignment:
Q  504 ttggtgagattctggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    ||||||||| | ||||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||||||||||||||||| |||||||||||||||    
T  18611056 ttggtgagaatatggtgaattgtttgtatgaacatatgtattgttgttgagatatatgtttatgcatacatgactgatggtgacggattttatatccaat 18610957  T
Q  603 gtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    || | || | |||| |||||||||||| |||||||| ||||||||||||||||    
T  18610956 gtggtgagttgtttgtgtgaacatatgtattgttgttgagtcatatgttcatg 18610904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 516 - 655
Target Start/End: Original strand, 20177424 - 20177564
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaatgtagagaatggt 614  Q
    |||||||||||||||||||||||||| |||||||| |||| |||||||||| | |||||||||||||||||   |||||||||||||| ||| |||||||    
T  20177424 tggtgaattgtttgtgtgaacatatgcattgttgttgagacatatgtttatgcatacatgactgatggtgatgaattttatatccaatatagtgaatggt 20177523  T
Q  615 ttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  20177524 ttgtgtgaacatatgcattgttgtcgagtcatatgttcatg 20177564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 516 - 655
Target Start/End: Original strand, 20222151 - 20222291
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaatgtagagaatggt 614  Q
    |||||||||||||||||||||||||| |||||||| |||| |||||||||| | |||||||||||||||||   |||||||||||||| ||| |||||||    
T  20222151 tggtgaattgtttgtgtgaacatatgcattgttgttgagacatatgtttatgcatacatgactgatggtgatgaattttatatccaatatagtgaatggt 20222250  T
Q  615 ttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  20222251 ttgtgtgaacatatgcattgttgtcgagtcatatgttcatg 20222291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 504 - 655
Target Start/End: Complemental strand, 18617850 - 18617698
Alignment:
Q  504 ttggtgagattctggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    ||||||||| | ||||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||||||||||||||||| |||||| |||| |||    
T  18617850 ttggtgagaatatggtgaattgtttgtatgaacatatgtattgttgttgagatatatgtttatgcatacatgactgatggtgacggattttgtatcaaat 18617751  T
Q  603 gtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    || | || | |||| |||||||||||  |||||||| ||||||||||||||||    
T  18617750 gtggtgagttgtttgtgtgaacatatatattgttgttgagtcatatgttcatg 18617698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 537 - 655
Target Start/End: Original strand, 18262829 - 18262948
Alignment:
Q  537 atatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaatgtagagaatggtttatgtgaacatatgcattgt 635  Q
    |||||||||||||| ||||||||||||||||| | |||||||||||||||| ||||||||||| ||||| | ||||||||| |||||||||||| |||||    
T  18262829 atatgtattgttgttgagatatatgtttatacatgcatgactgatggtgacggattttatatctaatgttgtgaatggtttgtgtgaacatatgtattgt 18262928  T
Q  636 tgtcgagtcatatgttcatg 655  Q
    ||||||||||||||||||||    
T  18262929 tgtcgagtcatatgttcatg 18262948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 516 - 651
Target Start/End: Original strand, 20177335 - 20177471
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttg-tgagatatatgtttatacgtacatgactgatggtgacagattttatatccaatgtagagaatggt 614  Q
    ||||||||||||||||||||||||||  |||||| ||||| ||| |||| | | ||||||||||||||||||  |||||||||||||||| | |||| ||    
T  20177335 tggtgaattgtttgtgtgaacatatgcgttgttgctgagacataagtttgtgcatacatgactgatggtgacgaattttatatccaatgtggtgaattgt 20177434  T
Q  615 ttatgtgaacatatgcattgttgtcgagtcatatgtt 651  Q
    || ||||||||||||||||||||| ||| ||||||||    
T  20177435 ttgtgtgaacatatgcattgttgttgagacatatgtt 20177471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 516 - 651
Target Start/End: Original strand, 20222062 - 20222198
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttg-tgagatatatgtttatacgtacatgactgatggtgacagattttatatccaatgtagagaatggt 614  Q
    ||||||||||||||||||||||||||  |||||| ||||| ||| |||| | | ||||||||||||||||||  |||||||||||||||| | |||| ||    
T  20222062 tggtgaattgtttgtgtgaacatatgcgttgttgctgagacataagtttgtgcatacatgactgatggtgacgaattttatatccaatgtggtgaattgt 20222161  T
Q  615 ttatgtgaacatatgcattgttgtcgagtcatatgtt 651  Q
    || ||||||||||||||||||||| ||| ||||||||    
T  20222162 ttgtgtgaacatatgcattgttgttgagacatatgtt 20222198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 248 - 427
Target Start/End: Original strand, 23227134 - 23227313
Alignment:
Q  248 cttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatgatgacttgctagatgttgtataagatattgatcata 347  Q
    ||||| ||| |||| ||||| || |||| ||||  |||||||||||| ||||||||||||| |||||| ||| ||||||||| ||  |||||||||||||    
T  23227134 ctttttagccaattgtcttacaacctttcgtgactagccttatgtgattaaatgaagatgtgtgatgaattgttagatgttggatgtgatattgatcata 23227233  T
Q  348 agatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||| | || ||| |||||||| ||| |||||||| |  ||||| | || |||||||||||||||||||| || |||||||    
T  23227234 agaagttgtgttttctcgttatttgcaatatgaggaacgtttgaattggtgaaactatatgatatagttaatgttgaatg 23227313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 3432349 - 3432436
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgttta 172  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||| || || |||| ||||| |||||    
T  3432349 aagtgagttggcctatgaaacgttgatgtatacactactgcactcatatgtgatttgtgtatatagatggttgaggtcctagagttta 3432436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 16040024 - 16040111
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgttta 172  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||| | |||||||||||||| || |||| ||||| |||||    
T  16040024 aagtgagttggcctatgaaacgttgatgtatacactactgcactcatatgtgacttgtgtatatacatggttgaggtcctagagttta 16040111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 229 - 427
Target Start/End: Complemental strand, 23148962 - 23148767
Alignment:
Q  229 gactttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatgatgacttgctagatgtt 328  Q
    ||||||||| ||||   ||||||| ||| |||||||||||||| ||| || |  |  ||||||||||||||||| ||||| |||||| ||| ||||||||    
T  23148962 gactttatcagaaatgattctttttagccaattatcttataatttttcgtaacta--cttatgtgactaaatgatgatgtgtgatgaattgttagatgtt 23148865  T
Q  329 gtataagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||| |||||| ||||| ||||| ||  || |||| ||||||| |||||||||| | |||| |||| |||||||||||||| || ||||  |||||||    
T  23148864 gtatatgatatttatcatgagatgttgtattttctc-ttacttggaatatgagaaatatttgaaatggtgaaactatatgatgtatttgacgttgaatg 23148767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 246 - 427
Target Start/End: Original strand, 37654752 - 37654934
Alignment:
Q  246 ttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatga-tgacttgctagatgttgtataagatattgatc 344  Q
    ||||||||||| || |||||||| |||||| ||||  |||||||| ||||||||||| || || ||| ||  ||| |  |||||| ||| |||||| |||    
T  37654752 ttcttttaagccaaatatcttatgatctttcgtgactagccttatatgactaaatgatgacgtgtgaatggattgttctatgttgaatatgatatttatc 37654851  T
Q  345 ataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||| || ||  || |||| ||||||| |||||||||| | |||||| || |||||||||||||| |||||||| |||||||    
T  37654852 ataaggtgttgtattttctctttacttggaatatgagaaatatttggagtggtgaaactatatgatgtagttgatgttgaatg 37654934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 22908720 - 22908781
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  22908720 ttacttggaatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 22908781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 25757487 - 25757422
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    |||||||||||| ||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  25757487 aagtgagttggcatatgaaacgttgatgtatacactactgcactcatatgtgatttgtgtatatac 25757422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 45559886 - 45559951
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    |||||||||||||||||| ||||||||||||||||||||| | |||||||| ||||||||||||||    
T  45559886 aagtgagttggcctatgaaacgttgatgtatacactactgcattcatatgtgatttgtgtatatac 45559951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 5080619 - 5080535
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtgttacttgactttaatgaagt 88  Q
    |||||||||| || || ||||||||||||||||||||||||   ||||  ||||||||||||||||| |||||||||||||||||    
T  5080619 taaccatctacgggtgcttttatgaaagaaataactttgtatagagggtctagtgagtccttgtgttgcttgactttaatgaagt 5080535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 3432234 - 3432313
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatgaa 86  Q
    |||||||||||||||||||| |||||||| ||| ||| |||||||||||||||||||| || || |||||||||||||||    
T  3432234 catctagggatgtttttatggaagaaatagcttcgtattaagggcttagtgagtccttttgttttcttgactttaatgaa 3432313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 516 - 602
Target Start/End: Complemental strand, 17500709 - 17500622
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    |||||||| ||||||||||||||||| |||||||| |||  ||||||| || | | ||||||||||||||||||||||||||||||||    
T  17500709 tggtgaatggtttgtgtgaacatatgcattgttgtcgagtcatatgttcatgcattcatgactgatggtgacagattttatatccaat 17500622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 485 - 602
Target Start/End: Complemental strand, 20708510 - 20708392
Alignment:
Q  485 atgcatatatgctaattgtttggtgagattctggtgaattgtttgtgtgaacatatgta-ttgttg-tgagatatatgtttatacgtacatgactgatgg 582  Q
    |||| |||||||||| |||| ||||||||| |||||||||||||||||||||||||| | |||||| ||||  || |||| || | | ||||||||||||    
T  20708510 atgcctatatgctaagtgtt-ggtgagattgtggtgaattgtttgtgtgaacatatgcatttgttgttgagtcatgtgttcatgcattcatgactgatgg 20708412  T
Q  583 tgacagattttatatccaat 602  Q
    ||||| ||||||||||||||    
T  20708411 tgacaaattttatatccaat 20708392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 6775467 - 6775528
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  6775467 ttacttggtatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 6775528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 518 - 602
Target Start/End: Original strand, 18262899 - 18262984
Alignment:
Q  518 gtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    |||||| |||||||||||||||||||||||||| |||  ||||||| || | | ||||||||||||||||| ||||||||||||||    
T  18262899 gtgaatggtttgtgtgaacatatgtattgttgtcgagtcatatgttcatgcattcatgactgatggtgacatattttatatccaat 18262984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 518 - 602
Target Start/End: Original strand, 20177515 - 20177600
Alignment:
Q  518 gtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    |||||| ||||||||||||||||| |||||||| |||  ||||||| || | | ||||||||||||||||||||||||||||||||    
T  20177515 gtgaatggtttgtgtgaacatatgcattgttgtcgagtcatatgttcatgcattcatgactgatggtgacagattttatatccaat 20177600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 518 - 602
Target Start/End: Original strand, 20222242 - 20222327
Alignment:
Q  518 gtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    |||||| ||||||||||||||||| |||||||| |||  ||||||| || | | ||||||||||||||||||||||||||||||||    
T  20222242 gtgaatggtttgtgtgaacatatgcattgttgtcgagtcatatgttcatgcattcatgactgatggtgacagattttatatccaat 20222327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 28836515 - 28836454
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  28836515 ttacttgggatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 28836454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 19332292 - 19332357
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    |||||||||||||||||| || |||||||||||||||||| |||||||| | ||||| ||||||||    
T  19332292 aagtgagttggcctatgaaacattgatgtatacactactgcactcatatatgatttgagtatatac 19332357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 146
Target Start/End: Complemental strand, 25295467 - 25295406
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtat 146  Q
    |||||||||||| ||||| ||||||||||||||||||||| |||||||||| |||| |||||    
T  25295467 aagtgagttggcatatgaaacgttgatgtatacactactgcactcatatgtgatttatgtat 25295406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 488 - 602
Target Start/End: Complemental strand, 16000876 - 16000760
Alignment:
Q  488 catatatgctaattgtttggtgagattctggtgaattgtttgtgtgaacatatgtatt-gttgt-gagatatatgtttatacgtacatgactgatggtga 585  Q
    |||||||||||| | |||| ||||  | || ||||||||||||||||||||||| ||| ||||| |||  ||||||| || | | |||||||||||||||    
T  16000876 catatatgctaaatatttgatgaggatgtgctgaattgtttgtgtgaacatatgcatttgttgttgagtcatatgttcatgcattcatgactgatggtga 16000777  T
Q  586 cagattttatatccaat 602  Q
    | |||||||||||||||    
T  16000776 cggattttatatccaat 16000760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 22313165 - 22313102
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatat 148  Q
    |||||||||||||| |||||||||||||||||| |||||| |||||||||| ||| || |||||    
T  22313165 aagtgagttggcctgtgagacgttgatgtatacgctactgcactcatatgtgattggtatatat 22313102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 19332511 - 19332585
Alignment:
Q  146 tatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgtaaaa 219  Q
    ||||||| ||||||||||||| |||||  ||||| ||||||||||| ||||||| ||| ||||||||||||||||    
T  19332511 tatacatagtcgaggccctagagtttatttacttggttttggttcatttgtctcaattattttaaagttgtaaaa 19332585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 24107822 - 24107883
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||  ||||||||| |||||||    
T  24107822 ttacttggaatatgagaattgtttgaaatggtgaaactatatgtgatagttgatgttgaatg 24107883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 24383903 - 24383847
Alignment:
Q  92 ttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatat 148  Q
    |||||||||||||||||  ||||||||||| || |||||||||| ||||||||||||    
T  24383903 ttggcctatgagacgtttgtgtatacactaatgcactcatatgtgatttgtgtatat 24383847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 410
Target Start/End: Complemental strand, 15932413 - 15932236
Alignment:
Q  232 tttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatg-atgacttgctagatgttgt 330  Q
    |||||||||||   ||||||||||| ||||||||||| || ||| ||||  |||||||| |||||||| |||||||| || |||| ||| || || |||     
T  15932413 tttatcggaaatgattcttttaagccaattatcttatgatatttcgtgactagccttatatgactaaacgaagatgtgtgaatgaattgttatatattg- 15932315  T
Q  331 ataagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgat 410  Q
    ||| |||||| ||||||||||| ||  |  |||| |||||||  ||||||||| | |||||| || ||||||||| ||||    
T  15932314 atatgatatttatcataagatgttgtatgttctc-ttacttggcatatgagaaatatttggagtggtgaaactatgtgat 15932236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 34012941 - 34013032
Alignment:
Q  126 actcatatgtaatttgtgtatatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgta 216  Q
    |||||||||| ||||  || ||||||| ||||||||||||  ||||| |||||| ||||||||||| ||||||| ||| ||||| |||||||    
T  34012941 actcatatgtgatttaagtgtatacatagtcgaggccctaaagtttatatacttggttttggttcatttgtctcaattattttagagttgta 34013032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 516 - 590
Target Start/End: Original strand, 41508567 - 41508642
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagat 590  Q
    |||||| ||||||||||||||||||| |||||||| |||  ||||||| || | |||||||||||||| |||||||    
T  41508567 tggtgagttgtttgtgtgaacatatgcattgttgttgagtcatatgttcatgcatacatgactgatggagacagat 41508642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 146 - 279
Target Start/End: Original strand, 45560113 - 45560247
Alignment:
Q  146 tatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctca-ttgttttaaagttgtaaaagggaagacggactttatcggaaaat 244  Q
    ||||||| ||||||||||||| |||||  ||||| ||||||||||| |||||||| ||||| ||| |||||  |||   ||||||||||| ||| |||      
T  45560113 tatacatagtcgaggccctagagtttatttacttggttttggttcatttgtctcaattgttctaa-gttgtgtaagtagagacggactttgtcgaaaatg 45560211  T
Q  245 gttcttttaagctaattatcttat-aatcttttgtg 279  Q
    ||||||| |||| ||||| ||||| |||||||||||    
T  45560212 gttctttaaagccaattaccttataaatcttttgtg 45560247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 11543784 - 11543711
Alignment:
Q  146 tatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgtaaa 218  Q
    ||||||| |||||||||||||  ||||  ||||| ||||||||||| ||||||| ||| |||||||||||||||    
T  11543784 tatacatagtcgaggccctagaatttaattacttggttttggttcatttgtctcaattattttaaagttgtaaa 11543711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 17151491 - 17151552
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| ||||||||||||||||| |||  ||||||||||||  ||||||||| |||||||    
T  17151491 ttacttggaatatgagaattgtttgaaatagtgaaactatatgtgatagttgatgttgaatg 17151552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 16039915 - 16039987
Alignment:
Q  15 ggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatgaa 86  Q
    ||||||||||| | ||||||||  || ||| ||||||||||||||||| ||||| || |||||||||||||||    
T  16039915 ggatgtttttaaggaagaaatagattagtattaagggcttagtgagtctttgtgttttcttgactttaatgaa 16039987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 22584301 - 22584341
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||||||| |||||||||| ||||||||||||||||||    
T  22584301 taaccatctagagatgtttttaggaaagaaataactttgta 22584341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 528 - 602
Target Start/End: Original strand, 45468760 - 45468835
Alignment:
Q  528 tgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    ||||| |||||||| |||||||| |||  ||||||| || | | |||||||||||||||| |||||||||||||||    
T  45468760 tgtgtaaacatatgcattgttgtcgagtcatatgttcatgcattcatgactgatggtgacggattttatatccaat 45468835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 25295240 - 25295186
Alignment:
Q  146 tatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctca 200  Q
    ||||||| ||||||||||||| |||||  ||||| ||||||||||| ||||||||    
T  25295240 tatacatagtcgaggccctagagtttatttacttggttttggttcatttgtctca 25295186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 25757260 - 25757206
Alignment:
Q  146 tatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctca 200  Q
    ||||||| ||||||||||||| |||||  ||||| ||||||||||| ||||||||    
T  25757260 tatacatagtcgaggccctagagtttatttacttggttttggttcatttgtctca 25757206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 419
Target Start/End: Complemental strand, 5237115 - 5237063
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgat 419  Q
    ||||||| ||||||||||| | ||| |||| |||||||||||||||||||||||    
T  5237115 ttacttggaatatgagaat-gcttgaaatggtgaaactatatgatatagttgat 5237063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 419
Target Start/End: Original strand, 24662483 - 24662535
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgat 419  Q
    ||||||| ||||||||||| | ||| |||| |||||||||||||||||||||||    
T  24662483 ttacttggaatatgagaat-gcttgaaatggtgaaactatatgatatagttgat 24662535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 419
Target Start/End: Complemental strand, 43684574 - 43684522
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgat 419  Q
    ||||||| ||||||||||| | ||| |||| |||||||||||||||||||||||    
T  43684574 ttacttggaatatgagaat-gcttgaaatggtgaaactatatgatatagttgat 43684522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 608 - 655
Target Start/End: Complemental strand, 16000844 - 16000796
Alignment:
Q  608 gaatggtttatgtgaacatatgcatt-gttgtcgagtcatatgttcatg 655  Q
    |||| |||| |||||||||||||||| ||||| ||||||||||||||||    
T  16000844 gaattgtttgtgtgaacatatgcatttgttgttgagtcatatgttcatg 16000796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 236 - 312
Target Start/End: Complemental strand, 17284324 - 17284248
Alignment:
Q  236 tcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatga 312  Q
    ||||||||  ||| ||||||  ||||||||||| | |||||||||  ||| | || |||||||||||||||||||||    
T  17284324 tcggaaaagattcctttaagtcaattatcttatgaccttttgtgactagcttcatttgactaaatgaagatgtatga 17284248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 23889209 - 23889169
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||||||| ||| |||||| ||||||||||||||||||    
T  23889209 taaccatctagagatatttttaggaaagaaataactttgta 23889169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 2e-54; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 485 - 655
Target Start/End: Original strand, 14276351 - 14276523
Alignment:
Q  485 atgcatatatgctaattgtttggtgagattctggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggt 583  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||  ||||||||||||||||||| ||||||||||||||| | |||||||||||||||    
T  14276351 atgcatatatgctaagtgtttggtgagattgtggtgaattgtttggatgaacatatgtattgttgttgagatatatgtttatgcatacatgactgatggt 14276450  T
Q  584 gacagattttatatccaatgtagagaatggtttatgtgaacatatgca-ttgttgtcgagtcatatgttcatg 655  Q
    ||| ||||||||||||||||| | |||| |||| |||||||||||||| ||||||| ||||||||||||||||    
T  14276451 gacggattttatatccaatgtggtgaattgtttgtgtgaacatatgcatttgttgttgagtcatatgttcatg 14276523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 90 - 237
Target Start/End: Complemental strand, 25123564 - 25123417
Alignment:
Q  90 agttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgtttagatacttagttttggtt 189  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||| || |||| ||||| ||||| ||||| ||||||||||    
T  25123564 agttggcctatgagacgttgatgtatacactactgcactcatatgtgacttgtgtatatacatggttgaggtcctagagtttatatactcagttttggtt 25123465  T
Q  190 caattgtctcattgttttaaagttgtaaaagggaagacggactttatc 237  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||    
T  25123464 caattgtctcattgttttaaagttgtaaaaggaaagatggactttatc 25123417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 516 - 655
Target Start/End: Original strand, 44306663 - 44306803
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaatgtagagaatggt 614  Q
    |||||||||||||||||||||||||| |||||||| |||| |||||||||| | |||||||||||||||||   |||||||||||||| ||| |||||||    
T  44306663 tggtgaattgtttgtgtgaacatatgcattgttgttgagacatatgtttatgcatacatgactgatggtgatgaattttatatccaatatagtgaatggt 44306762  T
Q  615 ttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  44306763 ttgtgtgaacatatgcattgttgtcgagtcatatgttcatg 44306803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 516 - 655
Target Start/End: Original strand, 39293133 - 39293273
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaatgtagagaatggt 614  Q
    |||||||||||||||||||||||||| |||||||| |||| |||||||||| | |||| |||||||| |||| ||||||||||| ||||||| |||| ||    
T  39293133 tggtgaattgtttgtgtgaacatatgcattgttgttgagacatatgtttatgcatacacgactgatgatgacggattttatatcaaatgtagtgaattgt 39293232  T
Q  615 ttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  39293233 ttgtgtgaacatatgcattgttgtcgagtcatatgttcatg 39293273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 516 - 655
Target Start/End: Original strand, 14252720 - 14252860
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaatgtagagaatggt 614  Q
    |||||| |||||||| ||||||||||||| ||||| |||||||||||||||   ||||| |||||||||||| ||||||| ||||||||| | || | ||    
T  14252720 tggtgagttgtttgtatgaacatatgtatcgttgttgagatatatgtttatttatacataactgatggtgacggattttacatccaatgtggtgagttgt 14252819  T
Q  615 ttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    || ||||||||||||||||||||| ||||||||||||||||    
T  14252820 ttgtgtgaacatatgcattgttgttgagtcatatgttcatg 14252860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 504 - 655
Target Start/End: Original strand, 7285836 - 7285986
Alignment:
Q  504 ttggtgagattctggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    ||||||||||| || |||||| ||||| ||||||||||||||||||| ||||||||||||||| | |||||||||||||||||| |||| ||||||||||    
T  7285836 ttggtgagattgtg-tgaattttttgtatgaacatatgtattgttgttgagatatatgtttatgcatacatgactgatggtgacggattgtatatccaat 7285934  T
Q  603 gtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    || | || | | || |||||||||||||||| |||| || |||||||||||||    
T  7285935 gtggtgagttg-ttgtgtgaacatatgcattattgttgattcatatgttcatg 7285986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 516 - 651
Target Start/End: Original strand, 44306574 - 44306710
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttg-tgagatatatgtttatacgtacatgactgatggtgacagattttatatccaatgtagagaatggt 614  Q
    ||||||||||||||||||||||||||  |||||| ||||| ||| |||| | | ||||||||||||||||||  |||||||||||||||| | |||| ||    
T  44306574 tggtgaattgtttgtgtgaacatatgcgttgttgctgagacataagtttgtgcatacatgactgatggtgacgaattttatatccaatgtggtgaattgt 44306673  T
Q  615 ttatgtgaacatatgcattgttgtcgagtcatatgtt 651  Q
    || ||||||||||||||||||||| ||| ||||||||    
T  44306674 ttgtgtgaacatatgcattgttgttgagacatatgtt 44306710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 370276 - 370189
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgttta 172  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||| || |||| ||||| |||||    
T  370276 aagtgagttggcctatgaaacgttgatgtatacactactgcactcatatgtgatttgtgtatatacatggttgaggtcctagagttta 370189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 25123685 - 25123606
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatgaa 86  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||    
T  25123685 catctagggatgtttttatggaagaaatagctttgtaataagggcttagtgagtccttgtgttttcttgactttaatgaa 25123606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 14251850 - 14251928
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatga 85  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||||    
T  14251850 catctagggatgtttttatgaaagaaatagctttgtattaagggcttagtgagtccttgtgttttcttgactttaatga 14251928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 8564304 - 8564368
Alignment:
Q  86 agtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  8564304 agtgagttggcctatgaaacgttgatgtatacactactgtactcatatgtgatttgtgtatatac 8564368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 2028170 - 2028091
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatgaa 86  Q
    |||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||| || |||||||||||||||    
T  2028170 catctagggatgtttttatggaagaaatagctttgtattaagggcttagtgagtccttgtgttttcttgactttaatgaa 2028091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 14251965 - 14252052
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgttta 172  Q
    |||||||||||||||||| |||||||||||||||||||||  ||||||||| |||||||||||||||| || |||| ||||| |||||    
T  14251965 aagtgagttggcctatgaaacgttgatgtatacactactgctctcatatgtgatttgtgtatatacatggttgaggtcctagagttta 14252052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 15926756 - 15926669
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgttta 172  Q
    |||||||||||||||||| ||| ||||||||||||||||| |||||||||| |||||||||||||||| || |||| ||||| |||||    
T  15926756 aagtgagttggcctatgaaacgatgatgtatacactactgcactcatatgtgatttgtgtatatacatggttgaggtcctagagttta 15926669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 15926871 - 15926792
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgt-gttacttgactttaatgaa 86  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||  || |||||||||||||||    
T  15926871 catctagggatgtttttatgaaagaaatagctttgtattaagggcttagtgagtccttgtattttcttgactttaatgaa 15926792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 370390 - 370313
Alignment:
Q  9 atctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatga 85  Q
    ||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||||    
T  370390 atctagggatgtttttatggaagaaatagctttgtattaagggcttagtgagtccttgtgttttcttgactttaatga 370313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 2191319 - 2191406
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgttta 172  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||| | ||||||||| |||| || |||| ||||| |||||    
T  2191319 aagtgagttggcctatgaaacgttgatgtatacactactgcactcatatgtgacttgtgtatacacatggtggaggtcctagagttta 2191406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 232 - 437
Target Start/End: Original strand, 9057744 - 9057948
Alignment:
Q  232 tttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatg-atgacttgctagatgttgt 330  Q
    |||||||||||   |||| |||||| ||||||||||| |||||| ||||  |||||||| |||||||||||| |||| || |||| ||| || ||||||     
T  9057744 tttatcggaaatgattctgttaagccaattatcttatgatctttcgtgactagccttatatgactaaatgaaaatgtgtgaatgaattgttatatgttg- 9057842  T
Q  331 ataagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatgttg 430  Q
    ||| |||| | ||||||||||| ||  |  |||| ||||||| |||||||||| |  ||||| || |||||||||||||| |||||||| ||||||| ||    
T  9057843 atatgatacttatcataagatgttgtatgttctc-ttacttggaatatgagaaataattggagtggtgaaactatatgatgtagttgatgttgaatgatg 9057941  T
Q  431 atgatga 437  Q
     ||||||    
T  9057942 ttgatga 9057948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 15952335 - 15952396
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  15952335 ttacttggaatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 15952396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 16480175 - 16480236
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  16480175 ttacttggaatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 16480236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 21675626 - 21675691
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| ||||||||||    
T  21675626 aagtgagttggcctatgagacgttgatggatacactactgcactcatatgtgattggtgtatatac 21675691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 26010430 - 26010491
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  26010430 ttacttggaatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 26010491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 518 - 602
Target Start/End: Original strand, 39293224 - 39293309
Alignment:
Q  518 gtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    |||||||||||||||||||||||| |||||||| |||  ||||||| || | | ||||||||||||||||||||||||||||||||    
T  39293224 gtgaattgtttgtgtgaacatatgcattgttgtcgagtcatatgttcatgcattcatgactgatggtgacagattttatatccaat 39293309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 46473421 - 46473356
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||| |||| |||||||||    
T  46473421 aagtgagttggcctatgaaacgttgatgtatacactactgaactcatatgtgatttatgtatatac 46473356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 246 - 418
Target Start/End: Complemental strand, 48354417 - 48354246
Alignment:
Q  246 ttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatg-atgacttgctagatgttgtataagatattgatc 344  Q
    ||||||||||| ||||||||||| |||||| ||||  || ||||| ||||||||||||||||| || |||| ||| || |||||| ||| |||| | |||    
T  48354417 ttcttttaagccaattatcttatgatctttcgtgactaggcttatatgactaaatgaagatgtgtgaatgaattgttatatgttg-atatgataattatc 48354319  T
Q  345 ataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttga 418  Q
    |||||||| ||  |  |||| ||||||| |||||||||| | |||||| || |||||||||||||| |||||||    
T  48354318 ataagatgttgtatgttctc-ttacttggaatatgagaaatatttggagtggtgaaactatatgatgtagttga 48354246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 429 - 602
Target Start/End: Complemental strand, 28389225 - 28389039
Alignment:
Q  429 tgatgatgaaatgttggtgggttcatatatgacatgtgatgatggactattagtggatgcatatatgctaattgtttggtgag--------attc----t 516  Q
    ||||| |||| |||||||| || |||||||||||||||||| || | | || ||| ||||||||||||||| ||||||||||         ||||    |    
T  28389225 tgatggtgaattgttggtgagtgcatatatgacatgtgatggtgaattgttggtgaatgcatatatgctaagtgtttggtgacggaattatattcaatgt 28389126  T
Q  517 ggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    ||||||| ||||||||||||||||| |||||||| |||  ||||||| || | | |||||||||||||||| |||||||||||||||    
T  28389125 ggtgaatggtttgtgtgaacatatggattgttgtcgagtcatatgttcatgcattcatgactgatggtgacggattttatatccaat 28389039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 485 - 602
Target Start/End: Original strand, 18081069 - 18081187
Alignment:
Q  485 atgcatatatgctaattgtttggtgagattctggtgaattgtttgtgtgaacatatgta-ttgttg-tgagatatatgtttatacgtacatgactgatgg 582  Q
    ||||||||||| ||| |||||||||||||| ||||||| |||||||||||||||||| | |||||| ||||  ||||||| ||   | ||||||||||||    
T  18081069 atgcatatatgttaagtgtttggtgagattgtggtgaa-tgtttgtgtgaacatatgcatttgttgttgagtcatatgttcatggattcatgactgatgg 18081167  T
Q  583 tgacagattttatatccaat 602  Q
    |||| |||||||||||||||    
T  18081168 tgacggattttatatccaat 18081187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 7291778 - 7291717
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  7291778 ttacttgggatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 7291717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 14275627 - 14275692
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    |||||||||||| ||||||||||||||||||||||||||| |||| ||||| |||||||| |||||    
T  14275627 aagtgagttggcatatgagacgttgatgtatacactactgaactcgtatgtgatttgtgtctatac 14275692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 16417389 - 16417328
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  16417389 ttacttgggatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 16417328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 518 - 602
Target Start/End: Original strand, 44306754 - 44306839
Alignment:
Q  518 gtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    |||||| ||||||||||||||||| |||||||| |||  ||||||| || | | ||||||||||||||||||||||||||||||||    
T  44306754 gtgaatggtttgtgtgaacatatgcattgttgtcgagtcatatgttcatgcattcatgactgatggtgacagattttatatccaat 44306839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 15978774 - 15978838
Alignment:
Q  86 agtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    ||||||||||||||||| |||||||| |||||||||||| ||||||| || ||||||||||||||    
T  15978774 agtgagttggcctatgaaacgttgatttatacactactgcactcataagtgatttgtgtatatac 15978838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 86 - 150
Target Start/End: Complemental strand, 19382660 - 19382596
Alignment:
Q  86 agtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    ||||| |||||||||||||||||||||| |||||||||| | |||||||| ||||||||||||||    
T  19382660 agtgatttggcctatgagacgttgatgtgtacactactgcagtcatatgtgatttgtgtatatac 19382596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 232 - 418
Target Start/End: Complemental strand, 9610332 - 9610147
Alignment:
Q  232 tttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatg-atgacttgctagatgttgt 330  Q
    |||||||||||   ||||||||||| |||| |||||| ||||||  |||  |||||||| ||||||||||||||||| || |||| ||| || ||||||     
T  9610332 tttatcggaaatgattcttttaagccaattgtcttatgatctttcttgactagccttatatgactaaatgaagatgtgtgaatgaattgttatatgttg- 9610234  T
Q  331 ataagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttga 418  Q
    ||| |||||| |||||| |||| ||  |  |||| ||||||| ||| |||||| | |||||| || |||||||||||||| |||||||    
T  9610233 atatgatatttatcatatgatgttgtatgttctc-ttacttggaatgtgagaaatatttggactggtgaaactatatgatgtagttga 9610147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 485 - 602
Target Start/End: Complemental strand, 9641765 - 9641646
Alignment:
Q  485 atgcatatatgctaattgtttggtgagattctggtgaattgtttgtgtgaacatatgta-ttgttg-tgagatatatgtttatacgtacatgactgatgg 582  Q
    ||||||||||| ||| |||||||||||||| ||||||||||||||||| |||||||| | |||||| ||||  ||||||| |  | | |||||||||||     
T  9641765 atgcatatatgttaagtgtttggtgagattgtggtgaattgtttgtgtaaacatatgcatttgttgttgagtcatatgttcaagcattcatgactgatga 9641666  T
Q  583 tgacagattttatatccaat 602  Q
    ||||  ||||||||||||||    
T  9641665 tgacgaattttatatccaat 9641646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 232 - 418
Target Start/End: Complemental strand, 9837904 - 9837719
Alignment:
Q  232 tttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatg-atgacttgctagatgttgt 330  Q
    |||||||||||   ||||||||||| |||| |||||| ||||||  |||  |||||||| ||||||||||||||||| || |||| ||| || ||||||     
T  9837904 tttatcggaaatgattcttttaagccaattgtcttatgatctttcttgactagccttatatgactaaatgaagatgtgtgaatgaattgttatatgttg- 9837806  T
Q  331 ataagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttga 418  Q
    ||| |||||| |||||| |||| ||  |  |||| ||||||| ||| |||||| | |||||| || |||||||||||||| |||||||    
T  9837805 atatgatatttatcatatgatgttgtatgttctc-ttacttggaatgtgagaaatatttggactggtgaaactatatgatgtagttga 9837719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 592 - 655
Target Start/End: Complemental strand, 28389138 - 28389075
Alignment:
Q  592 ttatatccaatgtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    |||||| |||||| | ||||||||| |||||||||||| |||||||||||||||||||||||||    
T  28389138 ttatattcaatgtggtgaatggtttgtgtgaacatatggattgttgtcgagtcatatgttcatg 28389075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 374 - 427
Target Start/End: Complemental strand, 15926281 - 15926228
Alignment:
Q  374 aatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||||||||||||||| || ||||||||||||||||||||||| |||||||    
T  15926281 aatatgagaattgtttggagtggtgaaactatatgatatagttgatgttgaatg 15926228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 89 - 165
Target Start/End: Complemental strand, 2028050 - 2027974
Alignment:
Q  89 gagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggcccta 165  Q
    |||||||||||||| ||||| ||||||||||||||| |||||||||| | || ||||||||||| || |||| ||||    
T  2028050 gagttggcctatgaaacgttaatgtatacactactgcactcatatgtgacttatgtatatacatggttgaggtccta 2027974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 8564521 - 8564593
Alignment:
Q  146 tatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgtaa 217  Q
    ||||||| ||||||||||||| |||||  | ||||||||||||||||||||||| ||| ||||||||||||||    
T  8564521 tatacatagtcgaggccctagagtttattttcttagttttggttcaattgtctcaattattttaaagttgtaa 8564593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 21538906 - 21538970
Alignment:
Q  86 agtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    ||||||||||||||||| |||||||||||||||||||||  |||||||   ||||||||||||||    
T  21538906 agtgagttggcctatgaaacgttgatgtatacactactgcgctcatatacgatttgtgtatatac 21538970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 2191203 - 2191282
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatgaa 86  Q
    |||||||||||||||||||| ||||||||  |||||| ||| ||||||||||| ||||||| || || ||||||||||||    
T  2191203 catctagggatgtttttatggaagaaatagatttgtattaatggcttagtgagcccttgtgttttctggactttaatgaa 2191282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 148
Target Start/End: Original strand, 18080434 - 18080497
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatat 148  Q
    |||| ||| |||||||||||| ||||||||||||||| || |||||||||| ||||||||||||    
T  18080434 aagtaagtcggcctatgagacattgatgtatacactaatgcactcatatgtgatttgtgtatat 18080497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 283 - 424
Target Start/End: Original strand, 9322187 - 9322329
Alignment:
Q  283 agccttatgtgactaaatgaagatgtatg-atgacttgctagatgttgtataagatattgatcataagatggtgggttatctcgttacttgtaatatgag 381  Q
    |||||||| ||||||||||||||| | || |||| ||| ||| ||||| ||| |||||| |||||||| || ||  || |||| ||||||| ||||||||    
T  9322187 agccttatatgactaaatgaagatatgtgaatgaattgttaggtgttgaatatgatatttatcataaggtgttgcattttctctttacttggaatatgag 9322286  T
Q  382 aattgtttggaatgatgaaactatatgatatagttgatattga 424  Q
    || | |||||| || || |||||||| |||| |||||| ||||    
T  9322287 aagtatttggagtggtggaactatattatatggttgatgttga 9322329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 15979000 - 15979074
Alignment:
Q  146 tatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgtaaaa 219  Q
    ||||||| ||||||||||||| |||||  ||||| ||||||||||| ||||||| ||| ||||||||||||||||    
T  15979000 tatacatagtcgaggccctagagtttatttacttggttttggttcatttgtctcaattattttaaagttgtaaaa 15979074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 39292454 - 39292500
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcat 131  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  39292454 aagtgagttggcctatgagacgttgatgtatactctactgcactcat 39292500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 366 - 419
Target Start/End: Complemental strand, 2027482 - 2027429
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgat 419  Q
    ||||||| ||||||| |||||||| ||||| |||||||||||||||||||||||    
T  2027482 ttacttggaatatgataattgtttagaatggtgaaactatatgatatagttgat 2027429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 2191935 - 2191996
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||  |||| ||||||||||||||| || |||||||    
T  2191935 ttacttggaatatgagaattgtttggaatagtgaagctatatgatatagttaatgttgaatg 2191996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 246 - 418
Target Start/End: Original strand, 16921040 - 16921211
Alignment:
Q  246 ttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatg-atgacttgctagatgttgtataagatattgatc 344  Q
    ||||||||||| ||||||||||| |||||| ||||   ||||||| ||||||||||||||||| || |||| ||| |  |||||| ||| |||||| |||    
T  16921040 ttcttttaagccaattatcttatgatctttcgtgactggccttatatgactaaatgaagatgtgtgaatgaattgttctatgttg-atatgatatttatc 16921138  T
Q  345 ataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttga 418  Q
     ||||||| ||  |  |||| ||||||  |||||||||| | ||| || || |||||||||||||| |||||||    
T  16921139 ttaagatgttgtatgttctc-ttactttaaatatgagaagtatttagagtggtgaaactatatgatgtagttga 16921211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 21539133 - 21539207
Alignment:
Q  146 tatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgtaaaa 219  Q
    ||||||| ||||||| ||||| |||||  ||||| ||||||||||| ||||||| ||| ||||||||||||||||    
T  21539133 tatacatagtcgaggtcctagagtttatttacttggttttggttcatttgtctcaattattttaaagttgtaaaa 21539207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 526 - 601
Target Start/End: Complemental strand, 3136168 - 3136092
Alignment:
Q  526 tttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaa 601  Q
    ||||||| |||||||| |||||||| |||  ||||||| ||||   ||||||||||||||||| |||||||||||||    
T  3136168 tttgtgtcaacatatgcattgttgttgagtcatatgttcatacaatcatgactgatggtgacaaattttatatccaa 3136092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 3193082 - 3193157
Alignment:
Q  146 tatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctca--ttgttttaaagttgtaaaa 219  Q
    ||||||| ||||||||||||| |||||  ||||| ||||||||||| ||||||||  |  ||||||||||||||||    
T  3193082 tatacatagtcgaggccctagagtttatttacttggttttggttcatttgtctcaattatttttaaagttgtaaaa 3193157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 11054115 - 11054075
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||||||| |||||||||| ||||||||||||||||||    
T  11054115 taaccatctagagatgtttttaggaaagaaataactttgta 11054075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 366 - 437
Target Start/End: Original strand, 20584109 - 20584180
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatgttgatgatga 437  Q
    ||||||| |||||||||| |   |||| |||||||||||||| || |||||||||||||||| || ||||||    
T  20584109 ttacttgaaatatgagaaatacgtggagtgatgaaactatattatgtagttgatattgaatgatgttgatga 20584180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 4597495 - 4597549
Alignment:
Q  96 cctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    |||||||||| |||| ||| ||||||||  |||||||||| ||||||||||||||    
T  4597495 cctatgagacattgaagtacacactacttcactcatatgtgatttgtgtatatac 4597549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 536 - 601
Target Start/End: Complemental strand, 12246662 - 12246596
Alignment:
Q  536 catatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaa 601  Q
    |||||| |||||||| |||  ||||||| || | ||||||| |||||||||||||||||||||||||    
T  12246662 catatgcattgttgttgagtcatatgttcatgcatacatgaatgatggtgacagattttatatccaa 12246596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 26071262 - 26071324
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtgtt 70  Q
    ||||||||| |||||||||||||||| |||| ||||   |||||  |||||||||||||||||    
T  26071262 catctaggggtgtttttatgaaagaattaaccttgtgtaaagggtctagtgagtccttgtgtt 26071324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 26095049 - 26095111
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtgtt 70  Q
    ||||||||| |||||||||||||||| |||| ||||   |||||  |||||||||||||||||    
T  26095049 catctaggggtgtttttatgaaagaattaaccttgtgtaaagggtctagtgagtccttgtgtt 26095111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 419
Target Start/End: Complemental strand, 11515045 - 11514993
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgat 419  Q
    ||||||| ||||||||||| | ||| |||| |||||||||||||||||||||||    
T  11515045 ttacttggaatatgagaat-gcttgaaatggtgaaactatatgatatagttgat 11514993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 419
Target Start/End: Original strand, 13912353 - 13912405
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgat 419  Q
    ||||||| ||||||||||| | ||| |||| |||||||||||||||||||||||    
T  13912353 ttacttggaatatgagaat-gcttgaaatggtgaaactatatgatatagttgat 13912405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 419
Target Start/End: Original strand, 15442799 - 15442851
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgat 419  Q
    ||||||| ||||||||||| | ||| |||| |||||||||||||||||||||||    
T  15442799 ttacttggaatatgagaat-gcttgaaatggtgaaactatatgatatagttgat 15442851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 242
Target Start/End: Original strand, 21675854 - 21675951
Alignment:
Q  146 tatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctca-ttgttttaaagttgtaaaagggaagacggactttatcggaaa 242  Q
    ||||||| || ||| |||||| |||||  || || |||||| |||| |||||||| ||||||||||||||||||| |  ||||| ||||| |||||||    
T  21675854 tatacatagtagagaccctagagtttatttatttggttttgattcatttgtctcaattgttttaaagttgtaaaatgagagacgaactttgtcggaaa 21675951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 419
Target Start/End: Original strand, 30263364 - 30263416
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgat 419  Q
    ||||||| ||||||||||| | ||| |||| |||||||||||||||||||||||    
T  30263364 ttacttggaatatgagaat-gcttgaaatggtgaaactatatgatatagttgat 30263416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 622 - 654
Target Start/End: Complemental strand, 3136160 - 3136128
Alignment:
Q  622 aacatatgcattgttgtcgagtcatatgttcat 654  Q
    ||||||||||||||||| |||||||||||||||    
T  3136160 aacatatgcattgttgttgagtcatatgttcat 3136128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 19486545 - 19486585
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||||||| |||||||||| |||||||||||| |||||    
T  19486545 taaccatctagagatgtttttaagaaagaaataacattgta 19486585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 217
Target Start/End: Complemental strand, 28719724 - 28719653
Alignment:
Q  146 tatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgtaa 217  Q
    ||||||| ||||||||| ||| |||||  ||||| ||||||||||| ||||||| ||| ||||||||||||||    
T  28719724 tatacatagtcgaggcc-tagagtttatttacttggttttggttcatttgtctcaattattttaaagttgtaa 28719653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 37784937 - 37784977
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||||| | |||||||||| ||||||||||||||||||    
T  37784937 taaccatcttgagatgtttttaggaaagaaataactttgta 37784977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 217
Target Start/End: Complemental strand, 46473193 - 46473121
Alignment:
Q  146 tatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgtaa 217  Q
    ||||||| ||||||||| ||| |||||  |||||  |||| ||||||||||||| ||| ||||||||||||||    
T  46473193 tatacatagtcgaggccttagagtttatttacttgatttttgttcaattgtctcaattattttaaagttgtaa 46473121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 106; Significance: 1e-52; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 460 - 655
Target Start/End: Complemental strand, 104778 - 104584
Alignment:
Q  460 acatgtgatgatggactattagtggatgcatatatgctaattgtttggtgagattctggtgaattgtttgtgtgaacatatgtattgttgt-gagatata 558  Q
    |||||||||| |||| | || ||| || |||||||||||| |||||||||||||| ||||||||||||||| |||||||||  |||||||| ||||||||    
T  104778 acatgtgatggtggattgttggtgaatccatatatgctaagtgtttggtgagattgtggtgaattgtttgtatgaacatat--attgttgttgagatata 104681  T
Q  559 tgtttatacgtacatgactgatggtgacagattttatatccaatgtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||||||||| |||||||||||||||||  ||||||||||||| ||| | ||||| ||| |||||||||||||||| |||||||||||||||||||||    
T  104680 tgtttatacatacatgactgatggtgaaggattttatatccactgtcgtgaatgatttgtgtgaacatatgcattcttgtcgagtcatatgttcatg 104584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 526 - 602
Target Start/End: Complemental strand, 104625 - 104548
Alignment:
Q  526 tttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    |||||||||||||||| ||| |||| |||  ||||||| || | | ||||||||||||||||| ||||||||||||||    
T  104625 tttgtgtgaacatatgcattcttgtcgagtcatatgttcatgcattcatgactgatggtgacatattttatatccaat 104548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 504 - 655
Target Start/End: Complemental strand, 23664 - 23512
Alignment:
Q  504 ttggtgagattctggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    ||||||||| | ||||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||||||||||||||||| |||||||||||||||    
T  23664 ttggtgagaatatggtgaattgtttgtatgaacatatgtattgttgttgagatatatgtttatgcatacatgactgatggtgacggattttatatccaat 23565  T
Q  603 gtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    || | || | |||| ||||||||||||||||||||| ||||||||||||||||    
T  23564 gtggtgagttgtttgtgtgaacatatgcattgttgttgagtcatatgttcatg 23512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 94; Significance: 2e-45; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 226 - 427
Target Start/End: Original strand, 6235 - 6436
Alignment:
Q  226 acggactttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatgatgacttgctagat 325  Q
    |||||||||| ||||||   ||| ||| ||| |||||||||| ||||||| ||||  |||||||||||||||| |||||||||||||||| ||| |||||    
T  6235 acggactttaccggaaatgattccttttagccaattatcttacaatctttcgtgactagccttatgtgactaagtgaagatgtatgatgaattgttagat 6334  T
Q  326 gttgtataagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaa 425  Q
    |||| ||| |||||||||||||||||| || ||| |||||||||||| |||||||||| |  |||||||| ||||||||||||| |||||| || |||||    
T  6335 gttggatatgatattgatcataagatgttgtgttttctcgttacttgcaatatgagaaataattggaatggtgaaactatatgacatagttaatgttgaa 6434  T
Q  426 tg 427  Q
    ||    
T  6435 tg 6436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 18318 - 18278
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  18318 taaccatctagagatgtttttatgaaagaaataactttgta 18278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 77; Significance: 2e-35; HSPs: 5)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 504 - 655
Target Start/End: Complemental strand, 28121 - 27965
Alignment:
Q  504 ttggtgagattctggtgaattgtttgtgtgaacatatgtattgttgt-----gagatatatgtttatacgtacatgactgatggtgacagattttatatc 598  Q
    ||||||||| | |||| |||||||||  |||||||||||||||||||      | |||||||||||| | ||||||||||||||||||||||||||||||    
T  28121 ttggtgagaatatggttaattgtttgcatgaacatatgtattgttgttgatatatatatatgtttatgcatacatgactgatggtgacagattttatatc 28022  T
Q  599 caatgtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    |||||| | || | |||| ||||||||||||||||||||| ||||||||||||||||    
T  28021 caatgtggtgagttgtttgtgtgaacatatgcattgttgttgagtcatatgttcatg 27965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 504 - 655
Target Start/End: Complemental strand, 40117 - 39961
Alignment:
Q  504 ttggtgagattctggtgaattgtttgtgtgaacatatgtattgttgt-----gagatatatgtttatacgtacatgactgatggtgacagattttatatc 598  Q
    ||||||||| | |||| |||||||||  |||||||||||||||||||      | |||||||||||| | ||||||||||||||||||||||||||||||    
T  40117 ttggtgagaatatggttaattgtttgcatgaacatatgtattgttgttgatatatatatatgtttatgcatacatgactgatggtgacagattttatatc 40018  T
Q  599 caatgtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    |||||| | || | |||| ||||||||||||||||||||| ||||||||||||||||    
T  40017 caatgtggtgagttgtttgtgtgaacatatgcattgttgttgagtcatatgttcatg 39961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 582
Target Start/End: Complemental strand, 28016 - 27949
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttg-tgagatatatgtttatacgtacatgactgatgg 582  Q
    |||||| ||||||||||||||||||| ||||||| ||||  ||||||| || | ||||||||||||||    
T  28016 tggtgagttgtttgtgtgaacatatgcattgttgttgagtcatatgttcatgcatacatgactgatgg 27949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 582
Target Start/End: Complemental strand, 40012 - 39945
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttg-tgagatatatgtttatacgtacatgactgatgg 582  Q
    |||||| ||||||||||||||||||| ||||||| ||||  ||||||| || | ||||||||||||||    
T  40012 tggtgagttgtttgtgtgaacatatgcattgttgttgagtcatatgttcatgcatacatgactgatgg 39945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 366 - 416
Target Start/End: Original strand, 23659 - 23709
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagtt 416  Q
    |||||||| ||||||||| | |||||| ||||||||||||||||| |||||    
T  23659 ttacttgttatatgagaaatatttggagtgatgaaactatatgatgtagtt 23709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 258 - 511
Target Start/End: Original strand, 12069 - 12307
Alignment:
Q  258 aattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatgatgacttgctagatgttgtataagatattgatcataagatggtggg 357  Q
    |||| ||||||||||||||||||  |||||||| |||||||||| || ||| |||||| ||| ||||||||| ||| |||||| ||||| ||||| ||      
T  12069 aattgtcttataatcttttgtgactagccttatatgactaaatgcagttgtttgatgatttgttagatgttggatatgatattaatcatgagatgttgta 12168  T
Q  358 ttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatgttgatgatgaaatgttggtgggttcatata 457  Q
    || |||| |||||||||||||||||| | | || |||| |||||| ||||||| |||||||||||||||||||||||              || ||||||    
T  12169 ttttctc-ttacttgtaatatgagaaatatgtgtaatggtgaaaccatatgatttagttgatattgaatgttgatga--------------gtgcatata 12253  T
Q  458 tgacatgtgatgatggactattagtggatgcatatatgctaattgtttggtgag 511  Q
    |||||||||| ||||||||| ||||| |||||| ||||| ||||| ||||||||    
T  12254 tgacatgtgaggatggactagtagtgaatgcatgtatgccaattgattggtgag 12307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 518 - 655
Target Start/End: Original strand, 9433 - 9571
Alignment:
Q  518 gtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaatgtagagaatggttt 616  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||| | || ||||||||||||||| ||||||||||||||| | | || | ||||    
T  9433 gtgaattgtttgtatgaacatatgtattgttgttgagatatatgtttatgcatagatgactgatggtgacggattttatatccaatatggtgagttgttt 9532  T
Q  617 atgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
     |||||||||||||||||| || |||||||| |||||||    
T  9533 gtgtgaacatatgcattgtcgttgagtcatacgttcatg 9571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 73; Significance: 5e-33; HSPs: 4)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 555 - 655
Target Start/End: Original strand, 2572 - 2672
Alignment:
Q  555 tatatgtttatacgtacatgactgatggtgacagattttatatccaatgtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcat 654  Q
    ||||||||||| | |||||||||||||||||| |||||||||||||||||   ||||||||| |||||||||||||||||||||||||||||||||||||    
T  2572 tatatgtttatgcatacatgactgatggtgacggattttatatccaatgtgctgaatggtttgtgtgaacatatgcattgttgtcgagtcatatgttcat 2671  T
Q  655 g 655  Q
    |    
T  2672 g 2672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 555 - 655
Target Start/End: Original strand, 10827 - 10927
Alignment:
Q  555 tatatgtttatacgtacatgactgatggtgacagattttatatccaatgtagagaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcat 654  Q
    ||||||||||| | |||||||||||||||||| |||||||||||||||||   ||||||||| |||||||||||||||||||||||||||||||||||||    
T  10827 tatatgtttatgcatacatgactgatggtgacggattttatatccaatgtgctgaatggtttgtgtgaacatatgcattgttgtcgagtcatatgttcat 10926  T
Q  655 g 655  Q
    |    
T  10927 g 10927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 519 - 602
Target Start/End: Original strand, 2624 - 2708
Alignment:
Q  519 tgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    ||||| ||||||||||||||||| |||||||| |||  ||||||| || | | ||||||||||||||||| ||||||||||||||    
T  2624 tgaatggtttgtgtgaacatatgcattgttgtcgagtcatatgttcatgcattcatgactgatggtgacaaattttatatccaat 2708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 519 - 602
Target Start/End: Original strand, 10879 - 10963
Alignment:
Q  519 tgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    ||||| ||||||||||||||||| |||||||| |||  ||||||| || | | ||||||||||||||||| ||||||||||||||    
T  10879 tgaatggtttgtgtgaacatatgcattgttgtcgagtcatatgttcatgcattcatgactgatggtgacaaattttatatccaat 10963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 429 - 573
Target Start/End: Original strand, 44281 - 44426
Alignment:
Q  429 tgatgatgaaatgttggtgggttcatatatgacatgtgatgatggactattagtggatgcatatatgctaattgtttggtgagattctggtgaattgttt 528  Q
    ||||| ||||||||||||| || ||||||||||||||| ||||||| | || ||| ||||||||||||||| ||||||| |||||| ||||||| || ||    
T  44281 tgatggtgaaatgttggtgagtgcatatatgacatgtggtgatggattgttggtgaatgcatatatgctaagtgtttggagagattgtggtgaaatgatt 44380  T
Q  529 gtgtgaacatatgtattgttg-tgagatatatgtttatacgtacat 573  Q
     |||||||||||||| ||||| |||| ||||||||||||| |||||    
T  44381 atgtgaacatatgtactgttgttgagttatatgtttatacatacat 44426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 245 - 437
Target Start/End: Original strand, 24717 - 24910
Alignment:
Q  245 gttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatga-tgacttgctagatgttgtataagatattgat 343  Q
    |||||||||||| ||||||| ||| |||||| ||||  |||||||| ||||||||| | ||||| ||| ||  ||| || |||||| |||  ||||| ||    
T  24717 gttcttttaagccaattatcatatgatctttcgtgactagccttatatgactaaataatgatgtgtgaatggattgttatatgttgaatataatatttat 24816  T
Q  344 cataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatgttgatgatga 437  Q
    ||| || || ||  || |||||||||||| ||||||| || | |||||| || |||||||||||||| || ||||| ||||||| || ||||||    
T  24817 catgaggtgttgtattttctcgttacttgaaatatgataaatatttggagtggtgaaactatatgatgtatttgatgttgaatgatgttgatga 24910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 60; Significance: 3e-25; HSPs: 5)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 14530 - 14617
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgttta 172  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||| || |||| ||||| |||||    
T  14530 aagtgagttggcctatgaaacgttgatgtatacactactgcactcatatgtgatttgtgtatatacatggttgaggtcctagagttta 14617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 14414 - 14493
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatgaa 86  Q
    |||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||| || |||||||||||||||    
T  14414 catctagggatgtttttatggaagaaatagctttgtattaagggcttagtgagtccttgtgttttcttgactttaatgaa 14493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 15102 - 15163
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  15102 ttacttggaatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 15163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 22460 - 22539
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatgaa 86  Q
    ||||||||||||||||||||||||||||| |||  || |||||||||| ||||||||| || || |||||||||||||||    
T  22460 catctagggatgtttttatgaaagaaatagcttaatattaagggcttaatgagtccttttgttttcttgactttaatgaa 22539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 85 - 135
Target Start/End: Original strand, 22576 - 22626
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgt 135  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  22576 aagtgagttggcctatgaaacgttgatgtatacactactgcactcatatgt 22626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 56; Significance: 7e-23; HSPs: 2)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 1141 - 1228
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgttta 172  Q
    |||||||||||||||||| || |||||||||||||||||| |||||||||| |||||||||||||||| || |||| ||||| |||||    
T  1141 aagtgagttggcctatgaaacattgatgtatacactactgcactcatatgtgatttgtgtatatacatggttgaggtcctagagttta 1228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 1026 - 1105
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatgaa 86  Q
    |||||||||||||||||||| |||||||| ||||||| ||||||||| ||||| ||||||| || |||||||||||||||    
T  1026 catctagggatgtttttatggaagaaatagctttgtattaagggcttggtgagcccttgtgttttcttgactttaatgaa 1105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 13634 - 13699
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||    
T  13634 aagtgagttggcctatgagacgttgatgtatacactactgcactcatatatgatttgtgtatatac 13699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 13862 - 13935
Alignment:
Q  146 tatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgtaaaa 219  Q
    ||||||| ||||||||||||| ||| |  ||||| ||||||||||| ||||||| ||| ||||||||||||||||    
T  13862 tatacatagtcgaggccctagagtt-atttacttggttttggttcatttgtctcaattattttaaagttgtaaaa 13935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 10312 - 10247
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||    
T  10312 aagtgagttggcctatgagacgttgatgtatacactacttcactcatatgtgatttgtgtatatac 10247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 10076 - 10010
Alignment:
Q  154 gtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgtaaaa 219  Q
    ||||||||||||| |||||  ||||| ||||||||||| ||||||| ||| ||||||||||||||||    
T  10076 gtcgaggccctagagtttatttacttggttttggttcatttgtctcaattattttaaagttgtaaaa 10010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 54; Significance: 1e-21; HSPs: 4)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 35655 - 35720
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||    
T  35655 aagtgagttggcctatgagacgttgatgtatacactactgcactcatatttgatttgtgtatatac 35720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 4044 - 4109
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||| |||||||    
T  4044 aagtgagttggcctatgagacattgatgtatacactactgaactcatatgttatttgtttatatac 4109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 516 - 655
Target Start/End: Original strand, 36179 - 36324
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatat--cc--aatgtagagaa 610  Q
    |||||||||||||||||||||||||| | |||||| |||| || ||||||||| | |||||||||||||||  ||||||||||  ||  ||||| | |||    
T  36179 tggtgaattgtttgtgtgaacatatgcaatgttgttgagacatttgtttatacattcatgactgatggtgatggattttatatatccgaaatgtggtgaa 36278  T
Q  611 tggtttatgtgaacatatgca-ttgttgtcgagtcatatgttcatg 655  Q
    | |||| |||||||||||||| ||||| | || |||||||||||||    
T  36279 ttgtttgtgtgaacatatgcatttgttattgaatcatatgttcatg 36324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 516 - 602
Target Start/End: Original strand, 36272 - 36360
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtatt-gttgtgagat-atatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    |||||||||||||||||||||||||| ||| ||| |   || ||||||| || | | ||||||||||||||||||||||||||||||||    
T  36272 tggtgaattgtttgtgtgaacatatgcatttgttattgaatcatatgttcatgcattcatgactgatggtgacagattttatatccaat 36360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 435 - 602
Target Start/End: Original strand, 98387 - 98556
Alignment:
Q  435 tgaaatgttggtgggttcatatatgacatgtgatgatggactattagtggatgcatatatgctaattgtttggtgagattctggtgaattgtttgtgtga 534  Q
    |||| |||||||| ||||||||||| || || ||| || | | || ||| ||||||||||| ||| |||||||||||| | |||||||||||||||||||    
T  98387 tgaattgttggtgagttcatatatgtcaagtaatggtgaattgttggtgaatgcatatatgttaagtgtttggtgagaatgtggtgaattgtttgtgtga 98486  T
Q  535 acatatgta-ttgttg-tgagatatatgtttatacgtacatgactgatggtgacagattttatatccaat 602  Q
    ||||||| | |||||| ||||  ||||||| |  | | |||||||||||||||  |||||||||||||||    
T  98487 acatatgcatttgttgttgagtcatatgttcacgcattcatgactgatggtgatggattttatatccaat 98556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 228 - 418
Target Start/End: Complemental strand, 68585 - 68396
Alignment:
Q  228 ggactttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatg-atgacttgctagatg 326  Q
    |||||||||||||||   ||||||| ||| ||||||||||| || ||| ||||  |||||| | ||||||||||||| ||| || |||  ||| || |||    
T  68585 ggactttatcggaaatgtttcttttgagccaattatcttatgatatttcgtgactagccttgtatgactaaatgaaggtgtgtgaatggattgttacatg 68486  T
Q  327 ttgtataagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttga 418  Q
    ||| ||| |||||| ||||||||||| ||  |  |||| ||||||| |||||||||| |||||||| || |||||||| ||||| |||||||    
T  68485 ttg-atatgatatttatcataagatgttgtatgttctc-ttacttgaaatatgagaaatgtttggagtggtgaaactacatgatgtagttga 68396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 20793 - 20857
Alignment:
Q  86 agtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  20793 agtgagttggcctatgaaacgttgatgtatacactactgcactcatatgtgatttgtgtatatac 20857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 15828 - 15756
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtgttacttgacttt 80  Q
    ||||||||| |||||||||||||||||||||||||||  |||||  || |||||||||||||| ||| |||||    
T  15828 catctaggggtgtttttatgaaagaaataactttgtataaagggtctaatgagtccttgtgtttctttacttt 15756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0786
Description:

Target: scaffold0786; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 232 - 427
Target Start/End: Complemental strand, 757 - 564
Alignment:
Q  232 tttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatgatgacttgctagatgttgta 331  Q
    |||| |||||| | ||||||| ||| |||| |||||| | |||||||||  |||||||| ||||||| ||||| ||| |||||| ||  ||||||||| |    
T  757 tttaccggaaactattctttttagccaattgtcttatgaccttttgtgactagccttatatgactaattgaaggtgtgtgatgaatta-tagatgttgga 659  T
Q  332 taagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    || |||||| ||||| || || |  ||| |||| |||||| ||||||||||| | || |||||| |||||||||||||| |||||||| |||||||    
T  658 tatgatatttatcatgaggtgttttgttttctctttacttataatatgagaaatatt-ggaatggtgaaactatatgatgtagttgatgttgaatg 564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 232 - 427
Target Start/End: Complemental strand, 5812 - 5619
Alignment:
Q  232 tttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatgatgacttgctagatgttgta 331  Q
    |||| |||||| | ||||||| ||| |||| |||||| | |||||||||  |||||||| ||||||| ||||| ||| |||||| ||  ||||||||| |    
T  5812 tttaccggaaactattctttttagccaattgtcttatgaccttttgtgactagccttatatgactaattgaaggtgtgtgatgaatta-tagatgttgga 5714  T
Q  332 taagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    || |||||| ||||| || || |  ||| |||| |||||| ||||||||||| | || |||||| |||||||||||||| |||||||  |||||||    
T  5713 tatgatatttatcatgaggtgttttgttttctctttacttataatatgagaaatatt-ggaatggtgaaactatatgatgtagttgaagttgaatg 5619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 232 - 427
Target Start/End: Complemental strand, 4345 - 4152
Alignment:
Q  232 tttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatgatgacttgctagatgttgta 331  Q
    |||| |||||| | ||||||| ||| |||| |||||| | |||||||||  |||||||| ||||||| ||||| ||| |||||| ||  ||||||||| |    
T  4345 tttaccggaaactattctttttagccaattgtcttatgaccttttgtgactagccttatatgactaattgaaggtgtgtgatgaatta-tagatgttgga 4247  T
Q  332 taagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    || |||||| ||||| || || |  ||| |||| |||||| ||||||||||| | || |||||| |||||||||||||| |||||||| |||||||    
T  4246 tatgatatttatcatgaggtgttttgttttctctttacttataatatgagaaatatt-ggaatggtgaaactatatgatgtagttgatgttgaatg 4152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 85 - 152
Target Start/End: Complemental strand, 94087 - 94020
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacat 152  Q
    |||||||||||||||||| ||||||||||||||||||||  |||||||||| ||||||||||||||||    
T  94087 aagtgagttggcctatgaaacgttgatgtatacactacttcactcatatgtgatttgtgtatatacat 94020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 94203 - 94127
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaat 83  Q
    |||||||||||||||||||| |||||||| ||||||| ||||||||| ||||||||||||| || ||||||||||||    
T  94203 catctagggatgtttttatggaagaaatagctttgtattaagggcttggtgagtccttgtgttttcttgactttaat 94127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 226 - 392
Target Start/End: Complemental strand, 84659 - 84492
Alignment:
Q  226 acggactttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatg-atgacttgctaga 324  Q
    |||||||||||||||||  |||||||||||| | ||||||||| |||||||||||  |||||||  ||||||||||||||||| || |||| ||  || |    
T  84659 acggactttatcggaaatggttcttttaagccagttatcttatgatcttttgtgactagccttaaatgactaaatgaagatgtgtgaatgaattattata 84560  T
Q  325 tgttgtataagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgtttgga 392  Q
    ||||| ||| |||||| |||||||| |  ||  || |||| ||||||| |||||||||| | ||||||    
T  84559 tgttggatatgatatttatcataaggtattgtattttctctttacttgaaatatgagaaatatttgga 84492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 52; Significance: 2e-20; HSPs: 5)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 187870 - 187949
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaatgaa 86  Q
    |||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||| || ||||||||| |||||    
T  187870 catctagggatgtttttatggaagaaatagctttgtattaagggcttagtgagtccttgtgttttcttgactttgatgaa 187949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 89 - 172
Target Start/End: Original strand, 187990 - 188073
Alignment:
Q  89 gagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggccctagtgttta 172  Q
    |||||||||||||| ||||||||||||||||||||| |||||||| | | |||||||||||||| || |||| ||||| |||||    
T  187990 gagttggcctatgaaacgttgatgtatacactactgcactcatatatgacttgtgtatatacatggttgaggtcctagagttta 188073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 75211 - 75139
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtgttacttgacttt 80  Q
    ||||||||| |||||||||||||||||||||||||||  |||||  || |||||||||||||| ||| |||||    
T  75211 catctaggggtgtttttatgaaagaaataactttgtataaagggtctaatgagtccttgtgttgctttacttt 75139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 251 - 346
Target Start/End: Complemental strand, 85465 - 85368
Alignment:
Q  251 ttaagctaattatcttataa-tcttttgtgatcagccttatgtgactaaatgaagatgtatg-atgacttgctagatgttgtataagatattgatcat 346  Q
    |||||| ||||| ||||||| ||||| ||||| |||||||||||||||||||||||||| || |||| ||| ||| ||||| ||| |||||| |||||    
T  85465 ttaagccaattaccttataaatctttcgtgattagccttatgtgactaaatgaagatgtgtgaatgaattgttaggtgttggatatgatatttatcat 85368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 228 - 308
Target Start/End: Complemental strand, 26638 - 26558
Alignment:
Q  228 ggactttatcggaaaatgttcttttaagctaattatcttataa-tcttttgtgatcagccttatgtgactaaatgaagatgt 308  Q
    ||||||||||| |||  ||||||| |||| ||||||||||||| ||||| ||||  |||||||| |||||||||||||||||    
T  26638 ggactttatcgaaaatggttcttt-aagccaattatcttataactctttcgtgactagccttatatgactaaatgaagatgt 26558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 17328 - 17389
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  17328 ttacttggaatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 17389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 50; Significance: 3e-19; HSPs: 3)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 76471 - 76406
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    ||||||||||||||||| ||| |||||||||||||||||| |||||||||| ||||||||||||||    
T  76471 aagtgagttggcctatgtgacattgatgtatacactactgcactcatatgtgatttgtgtatatac 76406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 76592 - 76526
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtgtt 70  Q
    ||||| ||||||| || ||||||||||||||||||||||||  |||||  || ||||| ||||||||    
T  76592 taaccttctaggggtgcttttatgaaagaaataactttgtacaaagggtctaatgagttcttgtgtt 76526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 332
Target Start/End: Original strand, 1202 - 1303
Alignment:
Q  232 tttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatg-atgacttgctagatgttgt 330  Q
    |||||||||||   ||||||||||  ||||||||||| ||  || ||||  |||||||| ||||||||||||||||| || |||| ||| || |||||||    
T  1202 tttatcggaaatgattcttttaagtcaattatcttatgattcttcgtgagtagccttatatgactaaatgaagatgtgtgaatgaattgttaaatgttgt 1301  T
Q  331 at 332  Q
    ||    
T  1302 at 1303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 50; Significance: 3e-19; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 109319 - 109380
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  109319 ttacttggaatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 109380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 283 - 416
Target Start/End: Original strand, 105754 - 105887
Alignment:
Q  283 agccttatgtgactaaatgaagatgtatgatgacttgctagat-gttgtataagatattgatcataagatggtgggttatctcgttacttgtaatatgag 381  Q
    |||||||||||| |||||||||||||||||||| ||||||||| |||  ||| ||| |||||||| ||||| || ||| |||||||||||| ||||||||    
T  105754 agccttatgtgattaaatgaagatgtatgatgagttgctagatggttagatatgatgttgatcat-agatgttgtgttttctcgttacttgcaatatgag 105852  T
Q  382 aattgtttggaatgatgaaactatatgatatagtt 416  Q
    || |  ||| |||| | ||| ||||| ||||||||    
T  105853 aaataattgaaatggttaaattatataatatagtt 105887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 117123 - 117187
Alignment:
Q  86 agtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    |||||||| |||||||| || |||||||||||||||||  ||||| || | ||||||||||||||    
T  117123 agtgagttagcctatgaaacattgatgtatacactactacactcaaatatgatttgtgtatatac 117187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 50; Significance: 3e-19; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 90122 - 90183
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  90122 ttacttggaatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 90183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 266 - 427
Target Start/End: Complemental strand, 78712 - 78553
Alignment:
Q  266 tataatcttttgtgatcagccttatgtgactaaatgaagatgtatgatgacttgctagatgttgtataagatattgatcataagatggtgggttatctcg 365  Q
    |||||||||| |||| || | || |||| |||||||||||||| |||||| ||| ||||||||| ||| |||| | ||||| ||||| ||  || ||||     
T  78712 tataatctttcgtgaccaactttgtgtggctaaatgaagatgtgtgatgaattg-tagatgttggatatgataattatcatgagatgttgtattttctc- 78615  T
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||| | |||| | || |||||||||||||| ||||| || |||||||    
T  78614 ttacttgaaatatgagaaatatttgaattggtgaaactatatgatgtagttaatgttgaatg 78553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 129307 - 129246
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||  ||||||||| |||||||    
T  129307 ttacttggaatatgagaattgtttgaaatggtgaaactatatgtgatagttgatgttgaatg 129246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 38684 - 38753
Alignment:
Q  13 agggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtgttacttgactttaa 82  Q
    |||| ||||| |||||||||||||||||||||  |||||  || ||||| |||||||| |||||| ||||    
T  38684 aggggtgtttctatgaaagaaataactttgtataaagggtctaatgagttcttgtgttgcttgacattaa 38753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 7565 - 7641
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtg-ttacttgactttaat 83  Q
    ||||||||||| |||||||| |||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||    
T  7565 catctagggatatttttatggaagaaatagctttgtattaagggcttagtgagtccttgtgttttcttgactttaat 7641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 485 - 602
Target Start/End: Original strand, 4217 - 4336
Alignment:
Q  485 atgcatatatgctaattgtttggtgagattctggtgaattgtttgtgtgaacatatgta-ttgttg-tgagatatatgtttatacgtacatgactgatgg 582  Q
    ||||||||||||||| |||||||||||||| |||||||||||| |||| |||||||| | |||||| ||||  ||||||| || | | ||||||||||||    
T  4217 atgcatatatgctaagtgtttggtgagattgtggtgaattgttagtgtaaacatatgcatttgttgttgagtcatatgttcatgcattcatgactgatgg 4316  T
Q  583 tgacagattttatatccaat 602  Q
    || |  ||||||||||||||    
T  4317 tggcgaattttatatccaat 4336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 10513 - 10575
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtgtt 70  Q
    |||||||||||||||||||| |||||||| ||||||| ||||||||||| |||||||||||||    
T  10513 catctagggatgtttttatggaagaaatagctttgtattaagggcttagcgagtccttgtgtt 10575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 11871 - 11777
Alignment:
Q  126 actcatatgtaatttgtgtatatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgtaaaa 219  Q
    |||||||||| || |  |||||||||| ||||||||||||| |||||| ||||| ||||||||||| ||||||| ||| ||||||||||||||||    
T  11871 actcatatgtgatctaagtatatacatagtcgaggccctagagtttagttacttggttttggttcatttgtctcaattattttaaagttgtaaaa 11777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 12077 - 12014
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    |||||||||| ||||||||| ||||||||||||||||||| ||||  |||| ||||||||||||||    
T  12077 aagtgagttgacctatgagatgttgatgtatacactactgcactc--atgtgatttgtgtatatac 12014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 516 - 601
Target Start/End: Original strand, 247275 - 247361
Alignment:
Q  516 tggtgaattgtttgtgtgaacatatgtattgttgt-gagatatatgtttatacgtacatgactgatggtgacagattttatatccaa 601  Q
    |||||||||||||||||| ||||||| |||||||| |||  ||||||| || | |||||||||||||||||| ||||||||||||||    
T  247275 tggtgaattgtttgtgtggacatatgcattgttgttgagtcatatgttcatgcatacatgactgatggtgacggattttatatccaa 247361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 608 - 655
Target Start/End: Original strand, 247279 - 247326
Alignment:
Q  608 gaatggtttatgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    |||| |||| |||| |||||||||||||||| ||||||||||||||||    
T  247279 gaattgtttgtgtggacatatgcattgttgttgagtcatatgttcatg 247326  T

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Target: scaffold0601 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 2008 - 2073
Alignment:
Q  85 aagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    |||||||||||| |||| |||||||||||||||||||||| |||||||||| ||||| ||||||||    
T  2008 aagtgagttggcttatgtgacgttgatgtatacactactgcactcatatgtgatttgagtatatac 2073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 2814 - 2875
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  2814 ttacttgggatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 2875  T

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Target: scaffold0078 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 38569 - 38630
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  38569 ttacttgggatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 38630  T

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Target: scaffold0023 (Bit Score: 46; Significance: 7e-17; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 155593 - 155654
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| ||||||||||||| |||||||| ||||||||||||||||||||||| |||||||    
T  155593 ttacttggaatatgagaattgcttggaatggtgaaactatatgatatagttgatgttgaatg 155654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 618 - 651
Target Start/End: Original strand, 57929 - 57962
Alignment:
Q  618 tgtgaacatatgcattgttgtcgagtcatatgtt 651  Q
    ||||||||||||||||||||| ||||||||||||    
T  57929 tgtgaacatatgcattgttgttgagtcatatgtt 57962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 6101 - 6040
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  6101 ttacttgggatatgagaattgtttggaatggtgaaactatatgatatagttgatgttgaatg 6040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 232 - 427
Target Start/End: Original strand, 23567 - 23762
Alignment:
Q  232 tttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatg-atgacttgctagatgttgt 330  Q
    |||||||||||  ||| |||||||| ||||||||||| |||||| ||||  |||||| | |||||||||| |||| | || |||| ||| || ||||||     
T  23567 tttatcggaaatagtttttttaagccaattatcttatgatctttcgtgactagccttgtatgactaaatggagatatgtgaatgaattgttatatgttgg 23666  T
Q  331 ataagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||| |||||| ||||||||||| ||  |  |||| ||||||| |||||||||| |  ||| | || ||||||||| |||| |||||||| |||||||    
T  23667 atatgatatttatcataagatgttgtatgttctc-ttacttggaatatgagaaataattgaagtggtgaaactatctgatgtagttgatgttgaatg 23762  T

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Target: scaffold0043 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 92 - 150
Target Start/End: Original strand, 14695 - 14753
Alignment:
Q  92 ttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatac 150  Q
    ||||||| |||||| |||||||||||||||||| |||||||||| ||||||||||||||    
T  14695 ttggcctctgagacattgatgtatacactactgcactcatatgtgatttgtgtatatac 14753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 1505 - 1566
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||||||||||||||| |||||||||||||| | |||||| |||||||    
T  1505 ttacttggaatatgagaattgtttggaatggtgaaactatatgatgtggttgatgttgaatg 1566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 232 - 427
Target Start/End: Complemental strand, 3768 - 3579
Alignment:
Q  232 tttatcggaaaatgttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatg-atgacttgctagatgttgt 330  Q
    |||||||||||  |||||||||||| ||||||||||| |||||| ||||  |||||||| ||||| ||||||||||| || ||||  || || ||||||     
T  3768 tttatcggaaatggttcttttaagccaattatcttatgatctttcgtgactagccttatatgact-aatgaagatgtgtgaatga-atgttatatgttgg 3671  T
Q  331 ataagatattgatcataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||| |||||| |||||||| || ||  || |||     |||| |||||||||| | |||||| ||  ||||||||||||| |||||||| |||||||    
T  3670 atatgatatttatcataaggtgttgtattttct-----cttggaatatgagaaatatttggagtggcgaaactatatgatgtagttgatgttgaatg 3579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 262 - 418
Target Start/End: Original strand, 98293 - 98448
Alignment:
Q  262 atcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatga-tgacttgctagatgttgtataagatattgatcataagatggtgggtta 360  Q
    ||||||| |||||||||||  |||||||| ||| |||||| |||||| ||| ||| ||| || |||||| ||| |||||| ||||||||||| ||  |      
T  98293 atcttatgatcttttgtgactagccttatatgattaaatgtagatgtgtgaatgaattgttatatgttg-atatgatatttatcataagatgttgtatgt 98391  T
Q  361 tctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttga 418  Q
    |||| ||||||| |||||||||| |  ||||| || |||||||||||||| |||||||    
T  98392 tctc-ttacttggaatatgagaaataattggagtggtgaaactatatgatgtagttga 98448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 246 - 418
Target Start/End: Complemental strand, 30171 - 30000
Alignment:
Q  246 ttcttttaagctaattatcttataatcttttgtgatcagccttatgtgactaaatgaagatgtatga-tgacttgctagatgttgtataagatattgatc 344  Q
    ||||||| ||| ||||||||||| |||||| ||||  | |||||| ||||||||||||||||||||| ||| ||| || |  ||| ||| |||||| |||    
T  30171 ttcttttgagccaattatcttatgatctttcgtgactaaccttatatgactaaatgaagatgtatgagtgaattgttatagcttg-atatgatatttatc 30073  T
Q  345 ataagatggtgggttatctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttga 418  Q
    || ||||| ||  |  |||| ||||||| |||||||||| |  ||||| || |||||||||||||| |||||||    
T  30072 atgagatgttgtatgttctc-ttacttggaatatgagaaataattggagtggtgaaactatatgatgtagttga 30000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 7025 - 7101
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgtaataagggcttagtgagtccttgtgttacttgacttt 80  Q
    ||||||||||||| || ||||||||||||||||||||||||  |||||  || ||||| |||||||| ||| |||||    
T  7025 taaccatctaggggtgcttttatgaaagaaataactttgtataaagggtctaatgagttcttgtgttgcttaacttt 7101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 47133 - 47173
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  47133 taaccatctagagatgtttttatgaaagaaataactttgta 47173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 1855 - 1780
Alignment:
Q  86 agtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgtatatacattgtcgaggc 161  Q
    ||||| || |||||||| ||||| |||| |||||||||| ||||| |||| |||||||||||||| |||| |||||    
T  1855 agtgaattagcctatgaaacgtttatgtgtacactactgcactcacatgtgatttgtgtatatactttgttgaggc 1780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 618 - 655
Target Start/End: Original strand, 7423 - 7460
Alignment:
Q  618 tgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  7423 tgtgaacatatgcattgttgttgagtcatatgttcatg 7460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 2496 - 2435
Alignment:
Q  83 tgaagtgagttggcctatgagacgttgatgtatacactactgtactcatatgtaatttgtgt 144  Q
    |||||||| || ||||||||||| || ||||||||||||||| |||||||||| | ||||||    
T  2496 tgaagtgaattagcctatgagacatttatgtatacactactgcactcatatgtgacttgtgt 2435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 618 - 655
Target Start/End: Complemental strand, 12580 - 12543
Alignment:
Q  618 tgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  12580 tgtgaacatatgcattgttgttgagtcatatgttcatg 12543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 130826 - 130765
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||| |||||||||| |  ||||| |||||||||||||| || ||||||||||||||||    
T  130826 ttacttgaaatatgagaagtacttggagtgatgaaactatattatgtagttgatattgaatg 130765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 618 - 655
Target Start/End: Original strand, 167626 - 167663
Alignment:
Q  618 tgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  167626 tgtgaacatatgcattgttgttgagtcatatgttcatg 167663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 618 - 655
Target Start/End: Original strand, 35233 - 35270
Alignment:
Q  618 tgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  35233 tgtgaacatatgcattgttgttgagtcatatgttcatg 35270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 618 - 655
Target Start/End: Original strand, 165850 - 165887
Alignment:
Q  618 tgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  165850 tgtgaacatatgcattgttgttgagtcatatgttcatg 165887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 504 - 587
Target Start/End: Original strand, 165825 - 165908
Alignment:
Q  504 ttggtgagattctggtgaattgtttgtgtgaacatatgtattgttg-tgagatatatgtttatacgtacatgactgatggtgaca 587  Q
    ||||||||| | |||||| ||||| ||||||||||||| ||||||| ||||  ||||||| || | |||||||||||||| ||||    
T  165825 ttggtgagaatttggtgagttgtt-gtgtgaacatatgcattgttgttgagtcatatgttcatgcatacatgactgatggagaca 165908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1957 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold1957
Description:

Target: scaffold1957; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 456 - 492
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||||| |||||||||||||||||||||||||||    
T  456 catctaggggtgtttttatgaaagaaataactttgta 492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1204 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold1204
Description:

Target: scaffold1204; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 1138 - 1210
Alignment:
Q  146 tatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgtaa 217  Q
    ||||||| ||||||||||||| |||||  |||||  |||||||||| ||||||| ||| ||||||||||||||    
T  1138 tatacatagtcgaggccctagagtttatttacttgattttggttcagttgtctcaattattttaaagttgtaa 1210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 416
Target Start/End: Complemental strand, 4967 - 4912
Alignment:
Q  361 tctcgttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagtt 416  Q
    |||| |||||||| ||||||||| | |||||| ||||||||||||||||| |||||    
T  4967 tctctttacttgttatatgagaaatatttggagtgatgaaactatatgatgtagtt 4912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 216
Target Start/End: Original strand, 8126 - 8196
Alignment:
Q  146 tatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgta 216  Q
    ||||||||||||||||| ||  |||||  ||||| ||||||||||||||||||| ||| |||||||||||||    
T  8126 tatacattgtcgaggcc-tatagtttatttacttggttttggttcaattgtctcaattattttaaagttgta 8196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 7224 - 7150
Alignment:
Q  146 tatacattgtcgaggccctagtgtttagatacttagttttggttcaattgtctc-attgttttaaagttgtaaaa 219  Q
    ||||||| || ||||| |||| ||||   ||||| ||||||||||||||||||| ||||||| ||||||||||||    
T  7224 tatacatagttgaggcactagagtttgtttacttggttttggttcaattgtctcaattgtttaaaagttgtaaaa 7150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1486 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1486
Description:

Target: scaffold1486; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 618 - 651
Target Start/End: Complemental strand, 1699 - 1666
Alignment:
Q  618 tgtgaacatatgcattgttgtcgagtcatatgtt 651  Q
    ||||||||||||||||||||| ||||||||||||    
T  1699 tgtgaacatatgcattgttgttgagtcatatgtt 1666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0329 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0329
Description:

Target: scaffold0329; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 618 - 655
Target Start/End: Complemental strand, 1849 - 1812
Alignment:
Q  618 tgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  1849 tgtgaatatatgcattgttgttgagtcatatgttcatg 1812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 427
Target Start/End: Complemental strand, 17563 - 17510
Alignment:
Q  374 aatatgagaattgtttggaatgatgaaactatatgatatagttgatattgaatg 427  Q
    ||||||||||||||||| |||| |||||||||||   ||||||||| |||||||    
T  17563 aatatgagaattgtttgaaatggtgaaactatatatgatagttgatgttgaatg 17510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 618 - 655
Target Start/End: Original strand, 9489 - 9526
Alignment:
Q  618 tgtgaacatatgcattgttgtcgagtcatatgttcatg 655  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  9489 tgtgaacatatgcattgttgttgagtcgtatgttcatg 9526  T

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Target: scaffold0141 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 419
Target Start/End: Complemental strand, 21568 - 21516
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgat 419  Q
    ||||||| ||||||||||| | ||| |||| |||||||||||||||||||||||    
T  21568 ttacttggaatatgagaat-gcttgaaatggtgaaactatatgatatagttgat 21516  T

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Target: scaffold0141; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 419
Target Start/End: Complemental strand, 25823 - 25771
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttgat 419  Q
    ||||||| ||||||||||| | ||| |||| |||||||||||||||||||||||    
T  25823 ttacttggaatatgagaat-gcttgaaatggtgaaactatatgatatagttgat 25771  T

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Target: scaffold1276 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 561 - 529
Alignment:
Q  8 catctagggatgtttttatgaaagaaataactt 40  Q
    ||||||||| |||||||||||||||||||||||    
T  561 catctaggggtgtttttatgaaagaaataactt 529  T

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Target: scaffold0429 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 2557 - 2597
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||||||| |||||||||| |||||||||||| |||||    
T  2557 taaccatctagagatgtttttaggaaagaaataacgttgta 2597  T

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Target: scaffold0331 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 4177 - 4137
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgta 44  Q
    ||||||||||| |||||||||| |||||||||||| |||||    
T  4177 taaccatctagagatgtttttaggaaagaaataacgttgta 4137  T

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Target: scaffold0273 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 7105 - 7065
Alignment:
Q  4 taaccatctagggatgtttttatgaaagaaataactttgta 44  Q
    |||||||||||  ||||||||| ||||||||||||||||||    
T  7105 taaccatctagaaatgtttttaggaaagaaataactttgta 7065  T

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Target: scaffold0107 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 366 - 418
Target Start/End: Complemental strand, 12394 - 12342
Alignment:
Q  366 ttacttgtaatatgagaattgtttggaatgatgaaactatatgatatagttga 418  Q
    ||||||| |||||||||| | |||||| || |||||||||||||| |||||||    
T  12394 ttacttggaatatgagaaatatttggagtggtgaaactatatgatgtagttga 12342  T

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