View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16546_high_17 (Length: 297)
Name: NF16546_high_17
Description: NF16546
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16546_high_17 |
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Alignment Details
Target: chr7 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 19 - 286
Target Start/End: Original strand, 45698147 - 45698414
Alignment:
| Q |
19 |
gtatgtaccacaaatgtgagtgaccaagtgcagagaaatttggagggtcttaatttgaccaacaaaaaagtgattatgatcacgccatgaagaatttgaa |
118 |
Q |
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| T |
45698147 |
gtatgtaccacaaatgtgagtgaccaagtgcagagaaatttggagggtcttaatttgaccaacaaaaaagtgattatgatcacgccatgaagaatttgaa |
45698246 |
T |
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| Q |
119 |
tctctgtcttgtacgtgggttgccggcgtgaatttcacgtggacgggggaaattcacgtgactcattctatcttgactttacctttctttgtttgctaag |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45698247 |
tctctgtcttgtacgtgggttgccggcgtgaatttcacgtggacgggggaaattcacgtgactcattctatcttgactttacctttctttgtttgctaag |
45698346 |
T |
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| Q |
219 |
atgtgactcattattcctgtccaaaattaaatgtgtcacattgttttctggtcctgttccgacttcat |
286 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45698347 |
atgtgactcattattcctgtccaaaattaaatgtgtcacattgttttctggtcctgttccgacttcat |
45698414 |
T |
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