View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16546_high_23 (Length: 269)
Name: NF16546_high_23
Description: NF16546
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16546_high_23 |
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Alignment Details
Target: chr1 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 51562795 - 51563052
Alignment:
| Q |
1 |
aacccatttcactcttgtttcttcaccaacgacttttctaccataaacccacagagtcacactccgagagaaagacactctctctcacattttcaatctc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
51562795 |
aacccatttcactcttgtttcttcaccaacgacttttctaccataaacccacagagtcacactccgagagaaagacactcactctcacattttcaatctc |
51562894 |
T |
|
| Q |
101 |
tcttccgagctcaatctggccgttaatggcggccaccgatgctcaaacctcgctccggcacgcattcggtaacgttctcgcgttcttcattctgatcttg |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51562895 |
tcttccgagctcaatctggccgttaatggcggccaccgatgctcaaacctcgctccggcacgcattcggtaacgttctcgcgttcttcattctgatcttg |
51562994 |
T |
|
| Q |
201 |
atcggtgttctcgccttctcgatccgtcttttctccgtaagcatttctccatttccca |
258 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51562995 |
atcggtgttctcgccttctcgatccgtcttttctccgtaagcatttctccatttccca |
51563052 |
T |
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