View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16547_low_10 (Length: 207)
Name: NF16547_low_10
Description: NF16547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16547_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 10314507 - 10314311
Alignment:
| Q |
1 |
tttcttttcatattattcttctcaataacttctgagattatatcaaaagtctgttttaagttatggtttgtaatcaaaatgcataaaaagaagcatgcct |
100 |
Q |
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| T |
10314507 |
tttcttttcatattattcttctacataacttctgagattatatcaaaagtctgttttaagttatggtttgtaatcaaaatgcataaaaagaagcatgcct |
10314408 |
T |
|
| Q |
101 |
cgctgatattccatagtttgacagaacaatcatcacttccactggcaaacatttttgggtcggacgccgaaaggtgaacagaccaagctctcctttg |
197 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |
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| T |
10314407 |
cgctgatattccatagtttgacagaacagtcatcacttccactggcaaacatttttgggtcggacgccgaaaagtgaacagaccaagctctcttttg |
10314311 |
T |
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