View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16547_low_7 (Length: 263)
Name: NF16547_low_7
Description: NF16547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16547_low_7 |
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| [»] scaffold1099 (1 HSPs) |
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Alignment Details
Target: scaffold1099 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: scaffold1099
Description:
Target: scaffold1099; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 7 - 226
Target Start/End: Original strand, 789 - 1008
Alignment:
| Q |
7 |
cctggcatttgtttgcctcagattagagaatgtctccataaagatcttgtatttctttcatccacatacatgcccttaatatttaatttactgtacattg |
106 |
Q |
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| T |
789 |
cctggcatttgtttgcctcagattagagaatgtctccataaagttcttgtatttctttcatccacatacatgcccttaatatttaatttactatacattg |
888 |
T |
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| Q |
107 |
gaataaatctctatcctccttatgactccataaagcctttgaaaccggttgttggaaaatggttcaaacttccaaaacaagtctattagtcactcaaacc |
206 |
Q |
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| T |
889 |
gaataaagctctatcctccttatgactccacaaagcctttgaaaccagttgttggaaaatgcttcaaacttccaaaccaagtctattagttactcaaaac |
988 |
T |
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| Q |
207 |
accaaccgcagttgaaagtg |
226 |
Q |
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| T |
989 |
accaaccgcagttgaaagtg |
1008 |
T |
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