View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16549_low_20 (Length: 470)

Name: NF16549_low_20
Description: NF16549
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16549_low_20
NF16549_low_20
[»] chr1 (25 HSPs)
chr1 (172-458)||(51999659-51999945)
chr1 (38-103)||(39027524-39027593)
chr1 (47-105)||(42155019-42155080)
chr1 (50-103)||(50625037-50625090)
chr1 (38-103)||(10914045-10914114)
chr1 (38-103)||(20061841-20061910)
chr1 (38-103)||(28031918-28031987)
chr1 (38-103)||(43191699-43191768)
chr1 (57-105)||(47829231-47829279)
chr1 (38-103)||(50096176-50096245)
chr1 (62-103)||(26244820-26244861)
chr1 (1-42)||(51998875-51998916)
chr1 (38-103)||(14602053-14602122)
chr1 (38-103)||(37172291-37172360)
chr1 (37-103)||(47829005-47829074)
chr1 (61-103)||(14602281-14602323)
chr1 (38-105)||(28031690-28031761)
chr1 (38-103)||(33600-33669)
chr1 (38-103)||(33828-33897)
chr1 (38-103)||(20062069-20062138)
chr1 (62-105)||(12322361-12322404)
chr1 (61-103)||(50096404-50096446)
chr1 (61-103)||(50624836-50624878)
chr1 (61-105)||(10913844-10913888)
chr1 (38-103)||(26244592-26244661)
[»] chr6 (25 HSPs)
chr6 (38-103)||(3345063-3345132)
chr6 (37-102)||(16525465-16525534)
chr6 (38-103)||(30608909-30608978)
chr6 (38-102)||(8926461-8926529)
chr6 (38-102)||(8936718-8936786)
chr6 (38-102)||(9571668-9571736)
chr6 (38-105)||(28853754-28853825)
chr6 (47-103)||(19661402-19661461)
chr6 (38-103)||(17238305-17238374)
chr6 (62-96)||(3485052-3485086)
chr6 (62-96)||(5404848-5404882)
chr6 (62-96)||(5409173-5409207)
chr6 (60-102)||(5924099-5924141)
chr6 (61-103)||(31717446-31717488)
chr6 (61-105)||(33783467-33783511)
chr6 (61-103)||(3484854-3484896)
chr6 (61-95)||(16525263-16525297)
chr6 (61-103)||(26272251-26272293)
chr6 (38-103)||(28853527-28853597)
chr6 (61-103)||(29819456-29819498)
chr6 (61-103)||(33783668-33783710)
chr6 (62-103)||(19661620-19661661)
chr6 (38-103)||(8926230-8926299)
chr6 (38-103)||(8936487-8936556)
chr6 (38-103)||(30609137-30609206)
[»] chr4 (31 HSPs)
chr4 (38-105)||(32592786-32592857)
chr4 (38-103)||(4712449-4712517)
chr4 (38-103)||(37815612-37815682)
chr4 (321-441)||(15977758-15977872)
chr4 (38-96)||(17865254-17865316)
chr4 (38-105)||(12792615-12792686)
chr4 (57-103)||(43750218-43750264)
chr4 (369-458)||(44260150-44260239)
chr4 (55-95)||(39385440-39385480)
chr4 (38-103)||(5720996-5721064)
chr4 (38-105)||(17865019-17865090)
chr4 (61-102)||(16959834-16959875)
chr4 (38-103)||(17107475-17107544)
chr4 (61-100)||(13493158-13493197)
chr4 (47-91)||(39385234-39385282)
chr4 (61-103)||(2184665-2184707)
chr4 (62-104)||(9301641-9301683)
chr4 (57-103)||(12792843-12792889)
chr4 (57-103)||(20046073-20046119)
chr4 (61-103)||(22487491-22487533)
chr4 (61-103)||(26314746-26314788)
chr4 (61-103)||(43750017-43750059)
chr4 (57-103)||(46081491-46081537)
chr4 (62-103)||(11021744-11021785)
chr4 (38-96)||(13492927-13492989)
chr4 (62-103)||(17107703-17107744)
chr4 (38-88)||(26314519-26314573)
chr4 (37-103)||(37815383-37815453)
chr4 (38-103)||(989121-989188)
chr4 (38-103)||(13683047-13683116)
chr4 (38-103)||(22487263-22487332)
[»] chr3 (26 HSPs)
chr3 (37-103)||(42093437-42093507)
chr3 (38-103)||(17109894-17109963)
chr3 (61-105)||(46962652-46962696)
chr3 (38-103)||(49500114-49500183)
chr3 (38-102)||(50645744-50645812)
chr3 (38-101)||(38807811-38807878)
chr3 (41-105)||(27285238-27285305)
chr3 (57-102)||(52835817-52835862)
chr3 (38-102)||(29838337-29838405)
chr3 (38-105)||(26582656-26582726)
chr3 (61-103)||(33162390-33162432)
chr3 (38-105)||(16056392-16056462)
chr3 (38-103)||(38807581-38807650)
chr3 (38-103)||(49499886-49499955)
chr3 (38-103)||(52835588-52835657)
chr3 (47-103)||(55092478-55092538)
chr3 (62-103)||(14545906-14545948)
chr3 (47-102)||(14546108-14546167)
chr3 (61-103)||(21323159-21323201)
chr3 (61-103)||(27285040-27285082)
chr3 (38-105)||(33162589-33162660)
chr3 (62-103)||(32315447-32315488)
chr3 (38-103)||(26582883-26582952)
chr3 (38-103)||(27934494-27934563)
chr3 (61-105)||(49121786-49121830)
chr3 (57-105)||(55092273-55092321)
[»] scaffold0817 (2 HSPs)
scaffold0817 (38-103)||(4253-4322)
scaffold0817 (38-103)||(4026-4095)
[»] scaffold0170 (2 HSPs)
scaffold0170 (38-103)||(8585-8654)
scaffold0170 (57-103)||(8813-8859)
[»] scaffold0103 (2 HSPs)
scaffold0103 (38-103)||(43320-43389)
scaffold0103 (61-103)||(43549-43591)
[»] chr5 (27 HSPs)
chr5 (38-103)||(6542302-6542371)
chr5 (38-105)||(6497461-6497532)
chr5 (38-105)||(22394167-22394238)
chr5 (38-99)||(24490887-24490951)
chr5 (38-103)||(10461388-10461457)
chr5 (38-103)||(15969701-15969770)
chr5 (38-102)||(43196944-43197012)
chr5 (37-103)||(3598455-3598525)
chr5 (62-103)||(4122648-4122689)
chr5 (38-103)||(3598684-3598753)
chr5 (38-103)||(14868944-14869012)
chr5 (57-103)||(5933396-5933442)
chr5 (38-105)||(24491112-24491183)
chr5 (37-103)||(6497234-6497304)
chr5 (57-102)||(25329163-25329208)
chr5 (57-96)||(5933191-5933230)
chr5 (38-105)||(4122846-4122917)
chr5 (61-103)||(7133396-7133438)
chr5 (50-103)||(40588921-40588974)
chr5 (58-95)||(6542538-6542575)
chr5 (38-96)||(10461623-10461685)
chr5 (62-103)||(40589524-40589564)
chr5 (62-103)||(43197172-43197213)
chr5 (38-102)||(14868720-14868784)
chr5 (38-103)||(18786024-18786093)
chr5 (38-103)||(18786252-18786320)
chr5 (57-105)||(29991371-29991419)
[»] chr2 (36 HSPs)
chr2 (38-103)||(3371573-3371642)
chr2 (38-103)||(29683445-29683514)
chr2 (38-103)||(19204863-19204933)
chr2 (38-105)||(28921462-28921533)
chr2 (38-105)||(33940724-33940795)
chr2 (38-96)||(18369056-18369118)
chr2 (38-103)||(10748537-10748606)
chr2 (38-105)||(32521744-32521816)
chr2 (38-102)||(14379156-14379224)
chr2 (38-105)||(2395426-2395497)
chr2 (38-103)||(6163947-6164010)
chr2 (61-103)||(7877394-7877436)
chr2 (57-103)||(12806615-12806661)
chr2 (38-105)||(41593994-41594065)
chr2 (38-105)||(41594220-41594291)
chr2 (38-103)||(3948407-3948476)
chr2 (38-103)||(12806820-12806889)
chr2 (38-103)||(19204635-19204704)
chr2 (61-103)||(4171796-4171838)
chr2 (61-103)||(6880043-6880085)
chr2 (37-103)||(6880244-6880314)
chr2 (38-105)||(18369282-18369352)
chr2 (63-103)||(37609028-37609068)
chr2 (38-103)||(37609226-37609295)
chr2 (62-105)||(17457789-17457832)
chr2 (61-103)||(7877595-7877637)
chr2 (57-103)||(13572537-13572583)
chr2 (38-105)||(33940946-33941017)
chr2 (37-96)||(42705230-42705293)
chr2 (61-102)||(3948636-3948677)
chr2 (38-96)||(13572749-13572811)
chr2 (39-103)||(28921238-28921305)
chr2 (38-96)||(30432873-30432935)
chr2 (50-103)||(38873531-38873584)
chr2 (38-95)||(2395200-2395261)
chr2 (38-103)||(3371345-3371414)
[»] chr7 (24 HSPs)
chr7 (38-103)||(19157964-19158033)
chr7 (38-103)||(20757363-20757432)
chr7 (38-103)||(40729334-40729403)
chr7 (38-96)||(24399-24461)
chr7 (38-96)||(44483504-44483566)
chr7 (38-103)||(22364922-22364991)
chr7 (57-105)||(22954406-22954454)
chr7 (38-95)||(42517146-42517207)
chr7 (61-103)||(829952-829994)
chr7 (61-103)||(1195132-1195174)
chr7 (57-103)||(19476665-19476711)
chr7 (57-103)||(40729129-40729175)
chr7 (61-94)||(22364724-22364757)
chr7 (38-103)||(13426563-13426632)
chr7 (57-96)||(19476461-19476500)
chr7 (61-103)||(19157763-19157805)
chr7 (61-103)||(20757162-20757204)
chr7 (61-103)||(31579501-31579543)
chr7 (57-99)||(35026510-35026552)
chr7 (38-105)||(35026713-35026784)
chr7 (62-103)||(34487413-34487454)
chr7 (62-103)||(34595390-34595431)
chr7 (63-103)||(34595590-34595630)
chr7 (62-102)||(44219365-44219405)
[»] chr8 (19 HSPs)
chr8 (38-96)||(31402955-31403018)
chr8 (61-102)||(31685943-31685984)
chr8 (61-105)||(9180314-9180358)
chr8 (38-103)||(13154510-13154579)
chr8 (38-103)||(13405719-13405788)
chr8 (37-103)||(220555-220624)
chr8 (37-103)||(689710-689779)
chr8 (37-103)||(734178-734247)
chr8 (37-103)||(858074-858143)
chr8 (57-103)||(24332533-24332578)
chr8 (62-103)||(3272991-3273032)
chr8 (38-96)||(18764328-18764390)
chr8 (58-103)||(18764556-18764601)
chr8 (50-102)||(26479566-26479618)
chr8 (38-105)||(6943926-6943997)
chr8 (61-103)||(31186644-31186686)
chr8 (62-103)||(6891849-6891890)
chr8 (62-103)||(6943728-6943769)
chr8 (38-103)||(13154282-13154351)
[»] scaffold0137 (1 HSPs)
scaffold0137 (61-103)||(36835-36877)
[»] scaffold0028 (1 HSPs)
scaffold0028 (38-103)||(74185-74254)
[»] scaffold0021 (1 HSPs)
scaffold0021 (42-103)||(118303-118368)
[»] scaffold0126 (2 HSPs)
scaffold0126 (57-103)||(36265-36311)
scaffold0126 (61-105)||(36064-36108)
[»] scaffold0167 (1 HSPs)
scaffold0167 (61-103)||(4658-4700)
[»] scaffold0006 (2 HSPs)
scaffold0006 (38-96)||(212690-212752)
scaffold0006 (38-103)||(212455-212524)


Alignment Details
Target: chr1 (Bit Score: 250; Significance: 1e-139; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 172 - 458
Target Start/End: Original strand, 51999659 - 51999945
Alignment:
Q  172 aacaattgtatttttgtctgtagaatgggtcgtggaaaaataactatgaaatacatcaaaaatgcgaaattacgcaaacaaactttcaagcaaagaaaag 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  51999659 aacaattgtatttttgtctgtagaatgggtcgtggaaaaataactatgaaatacataaaaaatgtgaaattacgcaaacaaactttcaagcaaagaaaag 51999758  T
Q  272 ctggattaattnnnnnnnttaccgaatatactatgaaggccggtgcgacagcttgtttgattgtgtatgatggtgatgatggtggtaataatacgggacc 371  Q
    ||||||||| |       |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51999759 ctggattaactaaaaaaattaccgaatatactatgaaggccggtgcaacagcttgtttgattgtgtatgatggtgatgatggtggtaataatacgggacc 51999858  T
Q  372 aatgacatggccagaagatcatacaatggtaaactccatgcttcaagagtatgtgcatcaaaagattgagaatacacccaagatatt 458  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51999859 aatgacatggccagaagatcatacaatggtaaactccatgcttcaagagtatgtgcatcaaaagattgagaatacacccaagatatt 51999945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 39027524 - 39027593
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| ||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||    
T  39027524 tttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttggttttgatccttg 39027593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 42155080 - 42155019
Alignment:
Q  47 tgtaaaaatatttt---gttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    ||||||||||||||   |||||||||||||||||||||||||||||||||||| ||||||||    
T  42155080 tgtaaaaatattttttggttttagtccctgcaaatataaaaaatttggttttggtccttgat 42155019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 50625090 - 50625037
Alignment:
Q  50 aaaaatattttgttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||| ||||||    
T  50625090 aaaaaaatttggttttagtccctgcaaatataaaaaatttggttttggtccttg 50625037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 10914114 - 10914045
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| ||||||||||||||    |||||||||||||||||||||| ||||||||||||| ||||||    
T  10914114 tttagtccgtgtaaaaatatttttttggttttagtccctgcaaatataacaaatttggttttggtccttg 10914045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 20061841 - 20061910
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| ||||||||||||||    |||||||||||||||||||||||||||||| ||||| ||||||    
T  20061841 tttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttgattttggtccttg 20061910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 28031987 - 28031918
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| ||||||||||||||    ||||||||||||||||||||||||| |||||||||| ||||||    
T  28031987 tttagtccctgtaaaaatatttttttagttttagtccctgcaaatataaaaattttggttttggtccttg 28031918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 43191699 - 43191768
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| ||||||||||||||    |||||||||||||||||||||||||| ||||||||| ||||||    
T  43191699 tttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaaattggttttggtccttg 43191768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 57 - 105
Target Start/End: Complemental strand, 47829279 - 47829231
Alignment:
Q  57 ttttgttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  47829279 ttttgttttagtccctgcaaatataaaaaaattggttttggtccttgat 47829231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 50096176 - 50096245
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| ||||||||||||||    ||||||||||||||||||||| || ||||||||||||||||||    
T  50096176 tttagtccctgtaaaaatatttttttggttttagtccctgcaaatatagaatatttggttttgatccttg 50096245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 26244861 - 26244820
Alignment:
Q  62 ttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  26244861 ttttagtccctgcaaatatagaaaatttggttttgatccttg 26244820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 51998875 - 51998916
Alignment:
Q  1 aatgaagagaaattataattgacaccatgattgtatatttag 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  51998875 aatgaagagaaattataattgacatcatgattgtatatttag 51998916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 14602053 - 14602122
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| | ||||||||||||    ||||||||||||||||||||| || ||||||||||||||||||    
T  14602053 tttagtccatataaaaatatttttttagttttagtccctgcaaatatagaatatttggttttgatccttg 14602122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 37172291 - 37172360
Alignment:
Q  38 tttagtccttgtaaaaatat---tttg-ttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| |||||||||||   |||| ||||||||||| ||||||||||||||||| ||||||||||||    
T  37172291 tttagtccctgtaaaaatatatttttgattttagtcccttcaaatataaaaaatttgattttgatccttg 37172360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 47829005 - 47829074
Alignment:
Q  37 atttagtccttgtaaaaatatttt---gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||| | ||||||||||||   ||||||||||||||||||||| || ||||||||||| ||||||    
T  47829005 atttagtccctataaaaatatttttttgttttagtccctgcaaatatagaatatttggttttggtccttg 47829074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 103
Target Start/End: Complemental strand, 14602323 - 14602281
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||||||||||||||||||||| ||||||||| ||||||    
T  14602323 gttttagtccctgcaaatataaaaaaattggttttggtccttg 14602281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 105
Target Start/End: Original strand, 28031690 - 28031761
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||||||||| ||||| ||||||    ||||||||||||||||||||| || ||||||||||| ||||||||    
T  28031690 tttagtccttataaaattatttttttggttttagtccctgcaaatatataatatttggttttggtccttgat 28031761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 33600 - 33669
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| | ||||||||||||    ||||||||| |||||||||||||| ||||||||||| ||||||    
T  33600 tttagtccctataaaaatatttttctagttttagtctctgcaaatataaaatatttggttttggtccttg 33669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 33897 - 33828
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| ||||||||||||||    |||||| || ||| |||||||||||||||||||||| ||||||    
T  33897 tttagtccctgtaaaaatatttttttggttttattctctgtaaatataaaaaatttggttttggtccttg 33828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 20062138 - 20062069
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| | ||||||||||||    ||||||||||||||||||||| || ||||||||||| ||||||    
T  20062138 tttagtccctataaaaatattttttgggttttagtccctgcaaatatagaatatttggttttggtccttg 20062069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 12322404 - 12322361
Alignment:
Q  62 ttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||||||||||||||||  |||||||||||||||| ||||||||    
T  12322404 ttttagtccctgcaaattaaaaaaatttggttttggtccttgat 12322361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 103
Target Start/End: Complemental strand, 50096446 - 50096404
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||||||| |||||||| |||||||||||||| ||||||    
T  50096446 gttttagtccctacaaatatagaaaatttggttttggtccttg 50096404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 103
Target Start/End: Original strand, 50624836 - 50624878
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||||||||| || ||||||||||| ||||||    
T  50624836 gttttagtccctgcaaatatagaatatttggttttggtccttg 50624878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 10913844 - 10913888
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    ||||||||||||||||||||| || ||||||||||| || |||||    
T  10913844 gttttagtccctgcaaatatagaatatttggttttggtcattgat 10913888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 26244592 - 26244661
Alignment:
Q  38 tttagtccttgtaaaaatattttgtt----ttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| |||||||||||||| ||    |||||||||||||||||| || ||||| ||||| ||||||    
T  26244592 tttagtccctgtaaaaatatttttttggatttagtccctgcaaatatagaatatttgattttggtccttg 26244661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 8e-19; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 3345063 - 3345132
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||| ||||||    
T  3345063 tttagtccttgtaaaaatatttttttcgttttagtccctgcaaatataaaaaatttggttttggtccttg 3345132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 16525534 - 16525465
Alignment:
Q  37 atttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatcctt 102  Q
    ||||||||||||||||||||||||    ||||||||||||| |||||||||||||||||||||| |||||    
T  16525534 atttagtccttgtaaaaatattttttttgttttagtccctgtaaatataaaaaatttggttttggtcctt 16525465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 30608909 - 30608978
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| ||||||||||||||    |||||||||||||||||||||||||||||||||||| ||||||    
T  30608909 tttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttggttttggtccttg 30608978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 8926529 - 8926461
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatcctt 102  Q
    |||||||| ||||||||||||||    |||||||||||||||||||||||||||||||||||| |||||    
T  8926529 tttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttggttttggtcctt 8926461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 8936786 - 8936718
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatcctt 102  Q
    |||||||| ||||||||||||||    |||||||||||||||||||||||||||||||||||| |||||    
T  8936786 tttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttggttttggtcctt 8936718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 9571736 - 9571668
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatcctt 102  Q
    |||||||| ||||||||||||||    |||||||||||||||||||| ||||||||| |||||||||||    
T  9571736 tttagtccctgtaaaaatatttttttggttttagtccctgcaaatatgaaaaatttgattttgatcctt 9571668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 28853825 - 28853754
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||||||| | ||||||||||||    |||||||| ||||||||||||||||||||||||||| ||||||||    
T  28853825 tttagtccctataaaaatatttttttggttttagttcctgcaaatataaaaaatttggttttggtccttgat 28853754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 19661402 - 19661461
Alignment:
Q  47 tgtaaaaatatttt---gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||   |||||||||||||||||||||||||||||| ||||| ||||||    
T  19661402 tgtaaaaatattttttggttttagtccctgcaaatataaaaaatttgattttggtccttg 19661461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 17238374 - 17238305
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| |||||||||| |||    ||||||||||||||||||||| |||||||||||||| ||||||    
T  17238374 tttagtccctgtaaaaataattttttggttttagtccctgcaaatatagaaaatttggttttggtccttg 17238305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 96
Target Start/End: Complemental strand, 3485086 - 3485052
Alignment:
Q  62 ttttagtccctgcaaatataaaaaatttggttttg 96  Q
    |||||||||||||||||||||||||||||||||||    
T  3485086 ttttagtccctgcaaatataaaaaatttggttttg 3485052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 96
Target Start/End: Complemental strand, 5404882 - 5404848
Alignment:
Q  62 ttttagtccctgcaaatataaaaaatttggttttg 96  Q
    |||||||||||||||||||||||||||||||||||    
T  5404882 ttttagtccctgcaaatataaaaaatttggttttg 5404848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 96
Target Start/End: Complemental strand, 5409207 - 5409173
Alignment:
Q  62 ttttagtccctgcaaatataaaaaatttggttttg 96  Q
    |||||||||||||||||||||||||||||||||||    
T  5409207 ttttagtccctgcaaatataaaaaatttggttttg 5409173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 102
Target Start/End: Complemental strand, 5924141 - 5924099
Alignment:
Q  60 tgttttagtccctgcaaatataaaaaatttggttttgatcctt 102  Q
    ||||||||||||| ||||||||||||||||||||||| |||||    
T  5924141 tgttttagtccctacaaatataaaaaatttggttttggtcctt 5924099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 103
Target Start/End: Complemental strand, 31717488 - 31717446
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||||||||||||||||| ||||||||||||| ||||||    
T  31717488 gttttagtccctgcaaatataacaaatttggttttggtccttg 31717446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 33783467 - 33783511
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||||||||| ||||||||||||||||||||||||| | ||||||    
T  33783467 gttttagtccttgcaaatataaaaaatttggttttggttcttgat 33783511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 103
Target Start/End: Original strand, 3484854 - 3484896
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||||||||| || ||||||||||| ||||||    
T  3484854 gttttagtccctgcaaatatagaatatttggttttggtccttg 3484896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 95
Target Start/End: Original strand, 16525263 - 16525297
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggtttt 95  Q
    |||||||||||||||||||||||| ||||||||||    
T  16525263 gttttagtccctgcaaatataaaatatttggtttt 16525297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 103
Target Start/End: Complemental strand, 26272293 - 26272251
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| ||||||||||||||||||||| ||||| ||||||    
T  26272293 gttttagttcctgcaaatataaaaaatttgattttggtccttg 26272251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 28853527 - 28853597
Alignment:
Q  38 tttagtccttgtaaaaatatttt-----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| ||||||||||||||     ||||||||||||||||||||| || |||| |||||| ||||||    
T  28853527 tttagtccctgtaaaaatattttttttggttttagtccctgcaaatatagaatatttagttttggtccttg 28853597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 103
Target Start/End: Original strand, 29819456 - 29819498
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||||||||| || ||||||||||| ||||||    
T  29819456 gttttagtccctgcaaatatagaatatttggttttggtccttg 29819498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 103
Target Start/End: Complemental strand, 33783710 - 33783668
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||||||||| || ||||||||||| ||||||    
T  33783710 gttttagtccctgcaaatatagaatatttggttttggtccttg 33783668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 19661661 - 19661620
Alignment:
Q  62 ttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||||||||||||||| || ||||||||||| ||||||    
T  19661661 ttttagtccctgcaaatatagaatatttggttttggtccttg 19661620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 8926230 - 8926299
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| | ||||||||||||    ||||||||||||||||| ||| || ||||||||||| ||||||    
T  8926230 tttagtccctataaaaatatttttttggttttagtccctgcaaaaatagaatatttggttttggtccttg 8926299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 8936487 - 8936556
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| | ||||||||||||    ||||||||||||||||| ||| || ||||||||||| ||||||    
T  8936487 tttagtccctataaaaatatttttttggttttagtccctgcaaaaatagaatatttggttttggtccttg 8936556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 30609206 - 30609137
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| | ||||||||||||    |||||||||| |||||||||| || ||||||||||| ||||||    
T  30609206 tttagtccctataaaaatattttttgggttttagtccatgcaaatatataatatttggttttggtccttg 30609137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 38 - 105
Target Start/End: Original strand, 32592786 - 32592857
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||||||||||||||||||||||    ||||||||||||||||||||||||| |||||||||| ||||||||    
T  32592786 tttagtccttgtaaaaatatttttttggttttagtccctgcaaatataaaaattttggttttggtccttgat 32592857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 4712517 - 4712449
Alignment:
Q  38 tttagtccttgtaaaaatatttt---gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||| ||||||    
T  4712517 tttagtccctataaaaatattttttggttttagtccctgcaaatataaaaaatttggttttggtccttg 4712449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 37815682 - 37815612
Alignment:
Q  38 tttagtccttgtaaaaatatttt-----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| ||||||||||||||     |||||||||||||||||||||||||||||||||||| ||||||    
T  37815682 tttagtccctgtaaaaatattttttttggttttagtccctgcaaatataaaaaatttggttttggtccttg 37815612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 441
Target Start/End: Original strand, 15977758 - 15977872
Alignment:
Q  321 agcttgtttgattgtgtatgatggtgatgatggtggtaataatacgggaccaatgacatggccagaagatcatacaatggtaaactccatgcttcaagag 420  Q
    |||||||||||||||||||||||  ||||      ||||||||  |||||||||||||||||||||| | | ||  || ||||||||||||||||||||     
T  15977758 agcttgtttgattgtgtatgatgaagatg------gtaataatgtgggaccaatgacatggccagaaaaccctaatattgtaaactccatgcttcaagaa 15977851  T
Q  421 tatgtgcatcaaaagattgag 441  Q
    |||| |||| | |||||||||    
T  15977852 tatgagcataagaagattgag 15977872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 17865316 - 17865254
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttg 96  Q
    |||||||| ||||||||||||||    ||||||||||||||||||||||||||||||||||||    
T  17865316 tttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttggttttg 17865254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 38 - 105
Target Start/End: Original strand, 12792615 - 12792686
Alignment:
Q  38 tttagtccttgtaaaaatattttgtt----ttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||||||| |||||||||||||| ||    ||||||||||||||||||||||||||| ||||| ||||||||    
T  12792615 tttagtccctgtaaaaatatttttttgattttagtccctgcaaatataaaaaatttgattttggtccttgat 12792686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 43750264 - 43750218
Alignment:
Q  57 ttttgttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||    
T  43750264 ttttattttagtccctgcaaatataaaaaatttggttttggtccttg 43750218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 458
Target Start/End: Original strand, 44260150 - 44260239
Alignment:
Q  369 accaatgacatggccagaagatcatacaatggtaaactccatgcttcaagagtatgtgcatcaaaagattgagaatacacccaagatatt 458  Q
    ||||||||||||||||||||| | || ||  ||||||||| ||||||||||||||    |||||||||||||||| || || ||||||||    
T  44260150 accaatgacatggccagaagaccttataagtgtaaactccttgcttcaagagtatcaaaatcaaaagattgagaaaactcctaagatatt 44260239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 95
Target Start/End: Complemental strand, 39385480 - 39385440
Alignment:
Q  55 tattttgttttagtccctgcaaatataaaaaatttggtttt 95  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  39385480 tattttgttttagtccctgcaaatataaaatatttggtttt 39385440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 5720996 - 5721064
Alignment:
Q  38 tttagtccttgtaaaaatatttt---gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| | ||||||||||||   ||||||||||||||||||||| || ||||||||||| ||||||    
T  5720996 tttagtccctataaaaatattttttggttttagtccctgcaaatatagaatatttggttttggtccttg 5721064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 105
Target Start/End: Original strand, 17865019 - 17865090
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||||||| | ||||||||||||    ||||||||||||||||||||| || ||||||||||| ||||||||    
T  17865019 tttagtccatataaaaatatttttttggttttagtccctgcaaatatagaatatttggttttggtccttgat 17865090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 16959834 - 16959875
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatcctt 102  Q
    |||||||||| ||||||||||||||||||||||||| |||||    
T  16959834 gttttagtccatgcaaatataaaaaatttggttttggtcctt 16959875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 17107475 - 17107544
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| ||| ||||||||||    ||||||||||||||||||||| || ||||||||||| ||||||    
T  17107475 tttagtccctgttaaaatatttttttggttttagtccctgcaaatatagaatatttggttttggtccttg 17107544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 100
Target Start/End: Complemental strand, 13493197 - 13493158
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatcc 100  Q
    ||||||||||||||||||||| || |||||||||||||||    
T  13493197 gttttagtccctgcaaatatagaatatttggttttgatcc 13493158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 39385234 - 39385282
Alignment:
Q  47 tgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttgg 91  Q
    ||||||||||||||    |||||||||||||||||||||||||||||||    
T  39385234 tgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttgg 39385282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 103
Target Start/End: Complemental strand, 2184707 - 2184665
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||||||||| || ||||||||||| ||||||    
T  2184707 gttttagtccctgcaaatatagaatatttggttttggtccttg 2184665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 9301641 - 9301683
Alignment:
Q  62 ttttagtccctgcaaatataaaaaatttggttttgatccttga 104  Q
    ||||||||||| |||| |||||||||||||||||| |||||||    
T  9301641 ttttagtcccttcaaacataaaaaatttggttttggtccttga 9301683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 12792889 - 12792843
Alignment:
Q  57 ttttgttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||| |||||||||||||||||||| || ||||||||||| ||||||    
T  12792889 ttttattttagtccctgcaaatatagaatatttggttttggtccttg 12792843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 20046119 - 20046073
Alignment:
Q  57 ttttgttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||| ||||||||||||  ||||||||||||||||||||| ||||||    
T  20046119 ttttattttagtccctgtcaatataaaaaatttggttttggtccttg 20046073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 103
Target Start/End: Complemental strand, 22487533 - 22487491
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||||| ||||||||| ||||||||||||||| ||||||    
T  22487533 gttttagtccttgcaaatatgaaaaatttggttttggtccttg 22487491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 103
Target Start/End: Complemental strand, 26314788 - 26314746
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||||||||| || ||||||||| ||||||||    
T  26314788 gttttagtccctgcaaatatagaatatttggtttagatccttg 26314746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 103
Target Start/End: Original strand, 43750017 - 43750059
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||||||||| || ||||||||||| ||||||    
T  43750017 gttttagtccctgcaaatatagaatatttggttttggtccttg 43750059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 103
Target Start/End: Original strand, 46081491 - 46081537
Alignment:
Q  57 ttttgttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||| ||| |||||||||||||| |||| |||||||||||||||||    
T  46081491 ttttggttttgtccctgcaaatatgaaaattttggttttgatccttg 46081537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 11021744 - 11021785
Alignment:
Q  62 ttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||| |||||||||||||||||| ||||||||||| ||||||    
T  11021744 ttttggtccctgcaaatataaaatatttggttttggtccttg 11021785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 13492927 - 13492989
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttg 96  Q
    |||||||| | ||||||||||||    ||||||||||||||||||| |||||| |||||||||    
T  13492927 tttagtccctctaaaaatatttttttggttttagtccctgcaaataaaaaaaaattggttttg 13492989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 17107744 - 17107703
Alignment:
Q  62 ttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||    
T  17107744 ttttagtccctgcaaatataaaaaaattgattttggtccttg 17107703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 26314519 - 26314573
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatt 88  Q
    |||||||| ||||||| ||||||    ||||||||||||||||||||||||||||    
T  26314519 tttagtccctgtaaaactatttttttggttttagtccctgcaaatataaaaaatt 26314573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 37815383 - 37815453
Alignment:
Q  37 atttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||| | ||||||||||||    |||||||||| |||||||||| || ||||||||||| ||||||    
T  37815383 atttagtccctataaaaatatttttttggttttagtccatgcaaatatagaatatttggttttggtccttg 37815453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 989121 - 989188
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||| |||||||||||||    |||||||||| || |||||||||||| ||||||||||||||||    
T  989121 tttagtcct-gtaaaaatatttttttggttttagtcc-tgtaaatataaaaaaattggttttgatccttg 989188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 13683047 - 13683116
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| | ||||||||||||    ||||||||||||| ||||||| || ||||||||||| ||||||    
T  13683047 tttagtccctataaaaatatttttttggttttagtccctgtaaatatagaatatttggttttggtccttg 13683116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 22487263 - 22487332
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||||| ||||||||||||     |||||||| ||||||||||| || ||||||||||| ||||||    
T  22487263 tttagtccttataaaaatatttttttgtttttagtctctgcaaatatagaatatttggttttggtccttg 22487332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 5e-17; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 42093437 - 42093507
Alignment:
Q  37 atttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||| ||||||||||||||    ||||||||| |||||||||||||||||||||||||||||||||    
T  42093437 atttagtccctgtaaaaatatttttttggttttagtctctgcaaatataaaaaatttggttttgatccttg 42093507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 17109894 - 17109963
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||| ||||||||||||||||||    |||||||| ||||||||||||||||||||||||||| ||||||    
T  17109894 tttaatccttgtaaaaatatttttttggttttagtgcctgcaaatataaaaaatttggttttggtccttg 17109963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 46962652 - 46962696
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  46962652 gttttagtccctgcaaatataaaaaatttggttttggtccttgat 46962696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 49500183 - 49500114
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| ||||||||||||||    |||||||||| ||||||||||||||||||||||||| ||||||    
T  49500183 tttagtccctgtaaaaatatttttttggttttagtccttgcaaatataaaaaatttggttttggtccttg 49500114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 50645812 - 50645744
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatcctt 102  Q
    |||||||| | ||||||||||||    |||||||||||||||||||||||||||||||||||| |||||    
T  50645812 tttagtccctataaaaatatttttttggttttagtccctgcaaatataaaaaatttggttttggtcctt 50645744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 38807878 - 38807811
Alignment:
Q  38 tttagtccttgtaaaaatat----tttgttttagtccctgcaaatataaaaaatttggttttgatcct 101  Q
    |||||||| |||||||||||    || |||||||||||||||||||||||||||||||||||| ||||    
T  38807878 tttagtccctgtaaaaatatatgtttggttttagtccctgcaaatataaaaaatttggttttggtcct 38807811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 27285305 - 27285238
Alignment:
Q  41 agtccttgtaaaaatatttt---gttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    ||||| ||||||||||||||   ||||||||||||||||||||||||| |||||||||| || |||||    
T  27285305 agtccctgtaaaaatatttttttgttttagtccctgcaaatataaaaagtttggttttggtcattgat 27285238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 102
Target Start/End: Complemental strand, 52835862 - 52835817
Alignment:
Q  57 ttttgttttagtccctgcaaatataaaaaatttggttttgatcctt 102  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||    
T  52835862 ttttattttagtccctgcaaatataaaaaatttggttttggtcctt 52835817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 102
Target Start/End: Original strand, 29838337 - 29838405
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatcctt 102  Q
    |||||||| || |||||||||||    ||||||||| |||||||||||||||||||||||||| |||||    
T  29838337 tttagtccctgcaaaaatatttttttcgttttagtctctgcaaatataaaaaatttggttttggtcctt 29838405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 105
Target Start/End: Original strand, 26582656 - 26582726
Alignment:
Q  38 tttagtccttgtaaaaatattttgtt----ttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||||||| |||||||||||||||||    ||||||| |||||||||| |||||||||||||| ||||||||    
T  26582656 tttagtccctgtaaaaatattttgttggtgttagtcc-tgcaaatatagaaaatttggttttggtccttgat 26582726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 103
Target Start/End: Original strand, 33162390 - 33162432
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  33162390 gttttagtccctgcaaattaaaaaaatttggttttgatccttg 33162432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 105
Target Start/End: Original strand, 16056392 - 16056462
Alignment:
Q  38 tttagtccttgtaaaaatatttt---gttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||||||| | ||||||||||||   ||||||||||||||||||||| || ||||||||||| || |||||    
T  16056392 tttagtccctataaaaatattttttggttttagtccctgcaaatatagaatatttggttttggtcattgat 16056462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 38807581 - 38807650
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||| |||| ||||||||||||    ||||||||||||||||||||| || ||||||||||| ||||||    
T  38807581 tttagcccttataaaaatatttttttggttttagtccctgcaaatatagaatatttggttttggtccttg 38807650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 49499886 - 49499955
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| | ||||||||||||    ||||||||||||||||||||| || ||||||||||| ||||||    
T  49499886 tttagtccctataaaaatattttttgggttttagtccctgcaaatatataatatttggttttggtccttg 49499955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 52835588 - 52835657
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| | ||||||||||||    ||||||||||||||||||||| || ||||||||||| ||||||    
T  52835588 tttagtccctataaaaatatttttttggttttagtccctgcaaatatagaatatttggttttggtccttg 52835657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 55092538 - 55092478
Alignment:
Q  47 tgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||    ||||||||| |||||||||||||||||||| ||||| ||||||    
T  55092538 tgtaaaaatatttttttggttttagtctctgcaaatataaaaaatttgattttggtccttg 55092478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 14545906 - 14545948
Alignment:
Q  62 ttttagtccctgcaaatat-aaaaaatttggttttgatccttg 103  Q
    ||||||||||||||||||| |||||||||||||||| ||||||    
T  14545906 ttttagtccctgcaaatataaaaaaatttggttttggtccttg 14545948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 14546167 - 14546108
Alignment:
Q  47 tgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatcctt 102  Q
    ||||||||||||||    ||||||||||||||||||||| || ||||||||||| |||||    
T  14546167 tgtaaaaatattttttgagttttagtccctgcaaatatagaatatttggttttggtcctt 14546108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 103
Target Start/End: Complemental strand, 21323201 - 21323159
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||||||||| || |||||||||| |||||||    
T  21323201 gttttagtccctgcaaatatagaatatttggttttaatccttg 21323159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 103
Target Start/End: Original strand, 27285040 - 27285082
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||||||||| || ||||||||||| ||||||    
T  27285040 gttttagtccctgcaaatatagaatatttggttttggtccttg 27285082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 33162660 - 33162589
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||||||| | ||||||||||||    |||||||||| |||||||||| || ||||||||||| ||||||||    
T  33162660 tttagtccctataaaaatatttttttggttttagtccttgcaaatatagaatatttggttttggtccttgat 33162589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 32315447 - 32315488
Alignment:
Q  62 ttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||| |||||||||| |||||||||||||| ||||||    
T  32315447 ttttagtccttgcaaatatagaaaatttggttttggtccttg 32315488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 26582952 - 26582883
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| ||||||||||||||     |||||||||||||||||||| || ||||| ||||| ||||||    
T  26582952 tttagtccctgtaaaaatatttttttgattttagtccctgcaaatatagaatatttgattttggtccttg 26582883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 27934494 - 27934563
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| | ||||||||||||    |||||||||||| |||||||| || ||||||||||| ||||||    
T  27934494 tttagtccctataaaaatatttttttggttttagtcccttcaaatatagaatatttggttttggtccttg 27934563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 49121786 - 49121830
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||||||||| ||||||||||||| |||| |||||| ||||||||    
T  49121786 gttttagtccatgcaaatataaaatatttagttttggtccttgat 49121830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 105
Target Start/End: Original strand, 55092273 - 55092321
Alignment:
Q  57 ttttgttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||| ||||||||| |||||||||| || ||||||||||| ||||||||    
T  55092273 ttttattttagtccgtgcaaatatagaatatttggttttggtccttgat 55092321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0817 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0817
Description:

Target: scaffold0817; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 4322 - 4253
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| ||||||||||||||    |||||||||||||||||||||||||||||||||||| ||||||    
T  4322 tttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttggttttggtccttg 4253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0817; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 4026 - 4095
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| | ||||||||||||    ||||||||||||| ||||||| |||||||||||||| ||||||    
T  4026 tttagtccctataaaaatatttttttggttttagtccctgtaaatatagaaaatttggttttggtccttg 4095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 8585 - 8654
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| ||||||||||||||    |||||||||||||||||||||||||||||||||||| ||||||    
T  8585 tttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttggttttggtccttg 8654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 8859 - 8813
Alignment:
Q  57 ttttgttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||    
T  8859 ttttgttttagtccctgcaaatatagaatatttggttttgatccttg 8813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 43320 - 43389
Alignment:
Q  38 tttagtccttgtaaaaatat----tttgttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| |||||||||||    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  43320 tttagtccctgtaaaaatatattttttgttttagtccctgcaaatataaaaaatttggttttggtccttg 43389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 103
Target Start/End: Complemental strand, 43591 - 43549
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||||||||| || ||||||||||||||||||    
T  43591 gttttagtccctgcaaatatagaatatttggttttgatccttg 43549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 6542302 - 6542371
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| ||||||||||||||    |||||||||||||||||||||||||||||| ||||||||||||    
T  6542302 tttagtccatgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttgattttgatccttg 6542371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 6497532 - 6497461
Alignment:
Q  38 tttagtccttgtaaaaatattttgtt----ttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||||||| |||||||||||||| ||    ||||| ||||||||||||||||||||||||||||||||||||    
T  6497532 tttagtccctgtaaaaatatttttttgattttagttcctgcaaatataaaaaatttggttttgatccttgat 6497461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 105
Target Start/End: Original strand, 22394167 - 22394238
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||||||| ||||||||||||||    |||||||||||||||||||||||||||||||||||| ||| ||||    
T  22394167 tttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttggttttggtccctgat 22394238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 24490887 - 24490951
Alignment:
Q  38 tttagtccttgtaaaaatatttt---gttttagtccctgcaaatataaaaaatttggttttgatc 99  Q
    |||||||| ||||||||||||||   ||||||||||||||||||||| |||||||||||||||||    
T  24490887 tttagtccctgtaaaaatattttttggttttagtccctgcaaatatagaaaatttggttttgatc 24490951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 10461388 - 10461457
Alignment:
Q  38 tttagtccttgtaaaaatattttgttt----tagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||| ||||||||||||||| |||    |||||||||||||||||||||||||||||||| ||||||    
T  10461388 tttagtctttgtaaaaatattttttttattttagtccctgcaaatataaaaaatttggttttggtccttg 10461457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 15969770 - 15969701
Alignment:
Q  38 tttagtccttgtaaaaata---ttttg-ttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| ||||||||||   ||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  15969770 tttagtccctgtaaaaataattttttgattttagtccctgcaaatataaaaaatttggttttggtccttg 15969701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 102
Target Start/End: Original strand, 43196944 - 43197012
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatcctt 102  Q
    |||||||| ||||||||||||||    ||||||||||||||||||||||||||||| |||||| |||||    
T  43196944 tttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttagttttggtcctt 43197012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 3598455 - 3598525
Alignment:
Q  37 atttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||| ||||||||||||||    ||||||||||||||||||||| || ||||||||||| ||||||    
T  3598455 atttagtccctgtaaaaatatttttttggttttagtccctgcaaatatagaatatttggttttggtccttg 3598525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 4122648 - 4122689
Alignment:
Q  62 ttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  4122648 ttttagtccctgcaaatataaaaaatttggttttggtccttg 4122689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 3598753 - 3598684
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| ||||||||||||||    |||||||||||||||||||||  ||||||||||||| ||||||    
T  3598753 tttagtccctgtaaaaatatttttttggttttagtccctgcaaatataggaaatttggttttggtccttg 3598684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 14869012 - 14868944
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||  ||||||||||||||    ||||||||||||||||||||| |||||||||||||||||||||    
T  14869012 tttagtcactgtaaaaatatttttttggttttagtccctgcaaatata-aaaatttggttttgatccttg 14868944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 5933442 - 5933396
Alignment:
Q  57 ttttgttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||||    
T  5933442 ttttgttttagtccctgcaaatatagaatatttggttttggtccttg 5933396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 24491183 - 24491112
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||||||| |||||||||||||     ||||||||||||||||||||| || ||||||||||| ||||||||    
T  24491183 tttagtccctgtaaaaatatttgtttggttttagtccctgcaaatatagaatatttggttttggtccttgat 24491112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 6497234 - 6497304
Alignment:
Q  37 atttagtccttgtaaaaatattttgtt----ttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||| |||||||||||| ||    |||||||||||||||||| || ||||||||||| ||||||    
T  6497234 atttagtccttataaaaatatttttttgattttagtccctgcaaatatagaatatttggttttggtccttg 6497304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 25329163 - 25329208
Alignment:
Q  57 ttttgttttagtccctgcaaatataaaaaatttggttttgatcctt 102  Q
    |||||||||||||||| ||||||||||||||||| ||||| |||||    
T  25329163 ttttgttttagtccctacaaatataaaaaatttgattttggtcctt 25329208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 96
Target Start/End: Original strand, 5933191 - 5933230
Alignment:
Q  57 ttttgttttagtccctgcaaatataaaaaatttggttttg 96  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  5933191 ttttattttagtccctgcaaatataaaatatttggttttg 5933230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 4122917 - 4122846
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||||||| | ||||||||||||    ||||||||||||| ||||||| || ||||||||||| ||||||||    
T  4122917 tttagtccctataaaaatatttttttggttttagtccctgtaaatatagaatatttggttttggtccttgat 4122846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 103
Target Start/End: Complemental strand, 7133438 - 7133396
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||||||||||||  |||||||||| ||||||    
T  7133438 gttttagtccctgcaaatataaaatttttggttttggtccttg 7133396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 40588974 - 40588921
Alignment:
Q  50 aaaaatattttgtttt-agtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||| ||||||||| ||||||||||||||||||| |||||| |||||||||||    
T  40588974 aaaaattttttgtttttagtccctgcaaatataaaatatttgg-tttgatccttg 40588921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 6542575 - 6542538
Alignment:
Q  58 tttgttttagtccctgcaaatataaaaaatttggtttt 95  Q
    |||||||||||||||||||||||| || ||||||||||    
T  6542575 tttgttttagtccctgcaaatatagaatatttggtttt 6542538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 10461685 - 10461623
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttg 96  Q
    |||||||| | ||||||||||||    ||||||||||||||||||||| || |||||||||||    
T  10461685 tttagtccctataaaaatatttttttggttttagtccctgcaaatatagaatatttggttttg 10461623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 40589564 - 40589524
Alignment:
Q  62 ttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  40589564 ttttagtccctgcaaatataaaatatttgg-tttgatccttg 40589524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 43197213 - 43197172
Alignment:
Q  62 ttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||||||||||||||| || ||||||||||| ||||||    
T  43197213 ttttagtccctgcaaatatagaatatttggttttggtccttg 43197172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 102
Target Start/End: Original strand, 14868720 - 14868784
Alignment:
Q  38 tttagtccttgtaaaaatattttgttttagtccctgcaaatataaaaaatttggttttgatcctt 102  Q
    |||||||| | |||||| | || ||||||||| ||||||||||| || ||||||||||| |||||    
T  14868720 tttagtccctataaaaaaaattggttttagtcactgcaaatatagaatatttggttttggtcctt 14868784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 18786024 - 18786093
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| | ||||||||||||    |||||||||| |||||||||| || ||||||||||| ||||||    
T  18786024 tttagtccctataaaaatatttttttggttttagtccttgcaaatatagaatatttggttttggtccttg 18786093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 18786320 - 18786252
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| ||||||||||||||    |||||||||| |||||||||| || ||||||||||| ||||||    
T  18786320 tttagtccctgtaaaaatatttttttggttttagtcc-tgcaaatatagaatatttggttttggtccttg 18786252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 105
Target Start/End: Complemental strand, 29991419 - 29991371
Alignment:
Q  57 ttttgttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||| ||||||||||| ||||||||||||||||| ||||| || |||||    
T  29991419 ttttattttagtccctacaaatataaaaaatttgattttggtctttgat 29991371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 3371642 - 3371573
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||  |||||||||||||    |||||||||||||||||||||||||||||||||||||||||||    
T  3371642 tttagtcccagtaaaaatatttttttagttttagtccctgcaaatataaaaaatttggttttgatccttg 3371573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 29683514 - 29683445
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| ||||||||||||||    |||||||||||||||||||||||||||||||||||| ||||||    
T  29683514 tttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttggttttggtccttg 29683445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 19204933 - 19204863
Alignment:
Q  38 tttagtccttgtaaaaatattttgtttta-----gtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||||||||||| |||||     |||||||||||||||||||||||||||||| ||||||    
T  19204933 tttagtccttgtaaaaatatttttttttattttagtccctgcaaatataaaaaatttggttttggtccttg 19204863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 28921533 - 28921462
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||| ||| ||||||||||||||    |||||||||||||||||||||||||||||||||||| ||||||||    
T  28921533 tttaatccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttggttttggtccttgat 28921462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 105
Target Start/End: Original strand, 33940724 - 33940795
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||||||| ||||||||||||||    |||||||| ||||||||||||||||||||||||||| ||||||||    
T  33940724 tttagtccctgtaaaaatatttttttagttttagttcctgcaaatataaaaaatttggttttggtccttgat 33940795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 18369056 - 18369118
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttg 96  Q
    |||||||| ||||||||||||||    ||||||||||||||||||||||||||||||||||||    
T  18369056 tttagtccctgtaaaaatattttttgggttttagtccctgcaaatataaaaaatttggttttg 18369118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 10748537 - 10748606
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| ||||||||||||||    |||||| ||||||||||||||||||||||||||||| ||||||    
T  10748537 tttagtccctgtaaaaatatttttttggttttaatccctgcaaatataaaaaatttggttttggtccttg 10748606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 32521816 - 32521744
Alignment:
Q  38 tttagtccttgtaaaaatatttt-----gttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||||||| ||||||||||||||     |||||| ||||||||||||||||||||||||||||| ||||||||    
T  32521816 tttagtccctgtaaaaatattttttttagttttaatccctgcaaatataaaaaatttggttttggtccttgat 32521744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 102
Target Start/End: Original strand, 14379156 - 14379224
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatcctt 102  Q
    |||||||| ||||||||||||||    |||||||||||||||||| ||||||||||||||||| |||||    
T  14379156 tttagtccctgtaaaaatatttttttggttttagtccctgcaaatgtaaaaaatttggttttggtcctt 14379224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 2395497 - 2395426
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||||||| ||||||||||||||    |||||| ||||||||||||||||||||||| ||||| ||||||||    
T  2395497 tttagtccctgtaaaaatattttttttgttttaatccctgcaaatataaaaaatttgattttggtccttgat 2395426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 6163947 - 6164010
Alignment:
Q  38 tttagtccttgtaaaaatattttgttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||||||||||| |||  ||| ||||||||||||||||||| |||||| ||||||    
T  6163947 tttagtccttgtaaaaatatttttttt--gtctctgcaaatataaaaaatttagttttggtccttg 6164010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 61 - 103
Target Start/End: Original strand, 7877394 - 7877436
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  7877394 gttttagtccctgcaaatataaaaaatttggttttggtccttg 7877436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 57 - 103
Target Start/End: Original strand, 12806615 - 12806661
Alignment:
Q  57 ttttgttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||    
T  12806615 ttttgttttagtccctgcaaatatagaatatttggttttgatccttg 12806661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 38 - 105
Target Start/End: Original strand, 41593994 - 41594065
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||||||| ||||||||||||||    |||||||| |||||||||||| |||||||||||||| ||||||||    
T  41593994 tttagtccctgtaaaaatatttttttggttttagttcctgcaaatatagaaaatttggttttggtccttgat 41594065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 41594291 - 41594220
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||||||| ||||||||||||||    |||||||||||||||||||||||| ||||||||||| || |||||    
T  41594291 tttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaatatttggttttggtcattgat 41594220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 3948407 - 3948476
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| | ||||||||||||    |||||||||||||||||||||||||||||||||| | ||||||    
T  3948407 tttagtccctataaaaatatttttttggttttagtccctgcaaatataaaaaatttggtttcggtccttg 3948476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 12806889 - 12806820
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||  |||||||||||||    ||||||||| |||||||||||||||||||||||||| ||||||    
T  12806889 tttagtccccgtaaaaatatttttttggttttagtcactgcaaatataaaaaatttggttttggtccttg 12806820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 19204635 - 19204704
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||||| ||||||||||||    ||||||||||||||||||||| || ||||||||||| ||||||    
T  19204635 tttagtccttataaaaatatttttttggttttagtccctgcaaatatagaatatttggttttggtccttg 19204704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 103
Target Start/End: Complemental strand, 4171838 - 4171796
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  4171838 gttttagtcccagcaaatataaaaaatttggttttggtccttg 4171796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 103
Target Start/End: Original strand, 6880043 - 6880085
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||||||||||||||||||||||||| ||||| ||||||    
T  6880043 gttttagtccctgcaaatataaaaaatttgattttggtccttg 6880085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 6880314 - 6880244
Alignment:
Q  37 atttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||| ||||||||||||    ||||||||| ||||||||||| || ||||||||||| ||||||    
T  6880314 atttagtccttataaaaatatttttttggttttagtctctgcaaatatagaatatttggttttggtccttg 6880244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 18369352 - 18369282
Alignment:
Q  38 tttagtccttgtaaaaatatttt---gttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||||||| | ||||||||||||   ||||||||||||||||||||| || ||||||||||| || |||||    
T  18369352 tttagtccctataaaaatattttttggttttagtccctgcaaatatagaatatttggttttggtcattgat 18369282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 37609028 - 37609068
Alignment:
Q  63 tttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| ||||||||||||||||||||||||| ||||||    
T  37609028 tttagtccttgcaaatataaaaaatttggttttggtccttg 37609068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 37609295 - 37609226
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| | ||||||||||||    ||||||||||||||||||||| || ||||||||||| ||||||    
T  37609295 tttagtccctctaaaaatatttttttggttttagtccctgcaaatatagaatatttggttttggtccttg 37609226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 17457789 - 17457832
Alignment:
Q  62 ttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    ||||||| ||||||||||||||||||| ||||||| ||||||||    
T  17457789 ttttagttcctgcaaatataaaaaattaggttttggtccttgat 17457832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 103
Target Start/End: Complemental strand, 7877637 - 7877595
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||||||||| || ||||||||||| ||||||    
T  7877637 gttttagtccctgcaaatatagaatatttggttttggtccttg 7877595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 103
Target Start/End: Original strand, 13572537 - 13572583
Alignment:
Q  57 ttttgttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||||||||||||| ||  |||||||||| ||||||    
T  13572537 ttttgttttagtccctgcaaatatagaatgtttggttttggtccttg 13572583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 33941017 - 33940946
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||||||| | ||||||||||||    ||||||||||||||||||||| || ||||||||||| || |||||    
T  33941017 tttagtccctttaaaaatatttttttggttttagtccctgcaaatatagaatatttggttttggtcattgat 33940946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 42705293 - 42705230
Alignment:
Q  37 atttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttg 96  Q
    ||||||||  ||||||||||||||    |||||||||  |||||||||||||||||||||||||    
T  42705293 atttagtctctgtaaaaatatttttttggttttagtcagtgcaaatataaaaaatttggttttg 42705230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 102
Target Start/End: Complemental strand, 3948677 - 3948636
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatcctt 102  Q
    ||||||||||||||||||||| || ||||||||||| |||||    
T  3948677 gttttagtccctgcaaatatagaatatttggttttggtcctt 3948636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 13572811 - 13572749
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttg 96  Q
    |||| ||| ||||||||||||||    ||||||||||| |||||||||||||||||| |||||    
T  13572811 tttaatccctgtaaaaatatttttttggttttagtcccagcaaatataaaaaatttgattttg 13572749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 28921238 - 28921305
Alignment:
Q  39 ttagtccttgtaaaaatatttt---gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||| | ||||||||||||   ||||||||||||||||||||| || ||||| ||||| ||||||    
T  28921238 ttagtccctataaaaatattttttggttttagtccctgcaaatatagaatatttgattttggtccttg 28921305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 30432935 - 30432873
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttg 96  Q
    |||||||| ||||||||||||||    ||||||||||||||||||||| ||  ||||||||||    
T  30432935 tttagtccctgtaaaaatatttttttggttttagtccctgcaaatatagaatttttggttttg 30432873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 38873531 - 38873584
Alignment:
Q  50 aaaaatattttgttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||| |||| |||||||||| |||||||||| || ||||||||||| ||||||    
T  38873531 aaaaaaatttggttttagtccttgcaaatatagaatatttggttttggtccttg 38873584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 2395200 - 2395261
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggtttt 95  Q
    |||||||| | ||||||||||||    ||||||||||||||||||||| || ||||||||||    
T  2395200 tttagtccctataaaaatatttttttggttttagtccctgcaaatatagaatatttggtttt 2395261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 3371345 - 3371414
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| ||||||||||||||    |||||||| |||||||||||| || |||| |||||| ||||||    
T  3371345 tttagtccctgtaaaaatatttttttggttttagttcctgcaaatatagaatatttagttttggtccttg 3371414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 19158033 - 19157964
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| ||||||||||||||    ||||||||||||||||||||||||| |||||||||| ||||||    
T  19158033 tttagtccctgtaaaaatatttttttagttttagtccctgcaaatataaaaattttggttttggtccttg 19157964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 20757432 - 20757363
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| ||||||||||||||    ||||||||||||||||||||||||| |||||||||| ||||||    
T  20757432 tttagtccctgtaaaaatatttttttagttttagtccctgcaaatataaaaattttggttttggtccttg 20757363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 40729403 - 40729334
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| ||||||||||||||    |||||||||||||||||||||||||||| ||||||| ||||||    
T  40729403 tttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaattgggttttggtccttg 40729334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 24399 - 24461
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttg 96  Q
    |||||||| ||||||||||||||    |||||||||||||||||||||||||||| |||||||    
T  24399 tttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaattgggttttg 24461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 44483566 - 44483504
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttg 96  Q
    |||||||| ||||||||||||||    ||||||||||||||||||||||||| ||||||||||    
T  44483566 tttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaattttggttttg 44483504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 22364991 - 22364922
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||| || ||||||||||||    ||||||||||||||||||||| || ||||||||||||||||||    
T  22364991 tttagtctttataaaaatatttttttggttttagtccctgcaaatatagaatatttggttttgatccttg 22364922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 105
Target Start/End: Original strand, 22954406 - 22954454
Alignment:
Q  57 ttttgttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||||||||||||||||||||||||||||| |||||| || ||||||||    
T  22954406 ttttgttttagtccctgcaaatataaaaaaattggttgtggtccttgat 22954454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 42517207 - 42517146
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggtttt 95  Q
    |||||||| ||||||||||||||    |||||||||||||||||||||||||||||| ||||    
T  42517207 tttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttgatttt 42517146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 103
Target Start/End: Complemental strand, 829994 - 829952
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  829994 gtttcagtccctgcaaatataaaaaatttggttttggtccttg 829952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 103
Target Start/End: Complemental strand, 1195174 - 1195132
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  1195174 gtttcagtccctgcaaatataaaaaatttggttttggtccttg 1195132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 19476711 - 19476665
Alignment:
Q  57 ttttgttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||||    
T  19476711 ttttgttttagtccctgcaaatatagaatatttggttttggtccttg 19476665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Original strand, 40729129 - 40729175
Alignment:
Q  57 ttttgttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||||    
T  40729129 ttttgttttagtccctgcaaatatagaatatttggttttggtccttg 40729175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 94
Target Start/End: Original strand, 22364724 - 22364757
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttt 94  Q
    ||||||||||||||||||||||||||||||||||    
T  22364724 gttttagtccctgcaaatataaaaaatttggttt 22364757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 13426632 - 13426563
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| | ||||||||||||    ||||||||||||||||||||| || ||||||||||| ||||||    
T  13426632 tttagtccctctaaaaatatttttttggttttagtccctgcaaatatagaatatttggttttggtccttg 13426563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 96
Target Start/End: Original strand, 19476461 - 19476500
Alignment:
Q  57 ttttgttttagtccctgcaaatataaaaaatttggttttg 96  Q
    ||||||||||||||||||||||||| || |||||||||||    
T  19476461 ttttgttttagtccctgcaaatatagaatatttggttttg 19476500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 103
Target Start/End: Original strand, 19157763 - 19157805
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||||||||| || ||||||||||| ||||||    
T  19157763 gttttagtccctgcaaatatagaatatttggttttggtccttg 19157805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 103
Target Start/End: Original strand, 20757162 - 20757204
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||||||||| || ||||||||||| ||||||    
T  20757162 gttttagtccctgcaaatatagaatatttggttttggtccttg 20757204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 103
Target Start/End: Original strand, 31579501 - 31579543
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||||||||||||||||||||| ||| ||||| ||||||    
T  31579501 gttttagtccctgcaaatataaaaaaattgattttggtccttg 31579543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 99
Target Start/End: Original strand, 35026510 - 35026552
Alignment:
Q  57 ttttgttttagtccctgcaaatataaaaaatttggttttgatc 99  Q
    |||||||||||||| |||||||||| || ||||||||||||||    
T  35026510 ttttgttttagtccatgcaaatatagaatatttggttttgatc 35026552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 35026784 - 35026713
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||||| | ||||||||||||||    ||||||||| ||| |||||||||||| ||||||||| ||||||||    
T  35026784 tttagttcatgtaaaaatatttttttggttttagtctctgtaaatataaaaaaattggttttggtccttgat 35026713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 34487454 - 34487413
Alignment:
Q  62 ttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||| ||||||||||||||||||||| | ||||||    
T  34487454 ttttagtccctccaaatataaaaaatttggtttcggtccttg 34487413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 34595390 - 34595431
Alignment:
Q  62 ttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||||||||||||  |||||||||||||||| ||||||    
T  34595390 ttttagtccctgcaaattaaaaaaatttggttttggtccttg 34595431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 34595630 - 34595590
Alignment:
Q  63 tttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||||||| || ||||||||||| ||||||    
T  34595630 tttagtccctgcaaatatagaatatttggttttggtccttg 34595590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 102
Target Start/End: Original strand, 44219365 - 44219405
Alignment:
Q  62 ttttagtccctgcaaatataaaaaatttggttttgatcctt 102  Q
    |||||||||||  |||||||||||||||||||||| |||||    
T  44219365 ttttagtccctataaatataaaaaatttggttttggtcctt 44219405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 31402955 - 31403018
Alignment:
Q  38 tttagtccttgtaaaaatatttt-----gttttagtccctgcaaatataaaaaatttggttttg 96  Q
    |||||||||||||||||||||||     |||||||||||||||||||||||| |||||||||||    
T  31402955 tttagtccttgtaaaaatattttttggggttttagtccctgcaaatataaaatatttggttttg 31403018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 102
Target Start/End: Complemental strand, 31685984 - 31685943
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatcctt 102  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  31685984 gttttagtccctgcaaatataaaaaatttggttttggtcctt 31685943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 9180358 - 9180314
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||    
T  9180358 gttttagtccttgcaaatataaaaaatttggttttggtccttgat 9180314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 13154579 - 13154510
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||| ||| ||||||||||||||    |||||||||||||||||||||||||| ||||||||| ||||||    
T  13154579 tttaatccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaaattggttttggtccttg 13154510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 13405788 - 13405719
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||| ||| ||||||||||||||    |||||||||||| ||||||||||||||||||||||| ||||||    
T  13405788 tttaatccctgtaaaaatatttttttggttttagtcccttcaaatataaaaaatttggttttggtccttg 13405719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 220555 - 220624
Alignment:
Q  37 atttagtccttgtaaaaatatttt---gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||| | ||||||||||||   ||||||||||||||||||||| || ||||||||||| ||||||    
T  220555 atttagtccctataaaaatattttttggttttagtccctgcaaatatagaatatttggttttggtccttg 220624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 689710 - 689779
Alignment:
Q  37 atttagtccttgtaaaaatatttt---gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||| | ||||||||||||   ||||||||||||||||||||| || ||||||||||| ||||||    
T  689710 atttagtccctataaaaatattttttggttttagtccctgcaaatatagaatatttggttttggtccttg 689779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 734178 - 734247
Alignment:
Q  37 atttagtccttgtaaaaatatttt---gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||| | ||||||||||||   ||||||||||||||||||||| || ||||||||||| ||||||    
T  734178 atttagtccctataaaaatattttttggttttagtccctgcaaatatagaatatttggttttggtccttg 734247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 858074 - 858143
Alignment:
Q  37 atttagtccttgtaaaaatatttt---gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||| | ||||||||||||   ||||||||||||||||||||| || ||||||||||| ||||||    
T  858074 atttagtccctataaaaatattttttggttttagtccctgcaaatatagaatatttggttttggtccttg 858143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 24332578 - 24332533
Alignment:
Q  57 ttttgttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  24332578 ttttgttttagtccctgcaa-tataaaaaatttggttttggtccttg 24332533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 3273032 - 3272991
Alignment:
Q  62 ttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||||||||||||| ||||||||| ||||||    
T  3273032 ttttagtccctgcaaatataaaaaacttggttttggtccttg 3272991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 18764328 - 18764390
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttg 96  Q
    |||||||||||||||||||||||    |||| ||||||| |||||||||||| ||||||||||    
T  18764328 tttagtccttgtaaaaatatttttttggtttgagtcccttcaaatataaaaactttggttttg 18764390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 18764601 - 18764556
Alignment:
Q  58 tttgttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||||||||||||||||||| || ||||||||||| ||||||    
T  18764601 tttgttttagtccctgcaaatatagaatatttggttttggtccttg 18764556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 26479618 - 26479566
Alignment:
Q  50 aaaaatattttgttttagtccctgcaaatataaaaaatttggttttgatcctt 102  Q
    ||||| |||| ||||||||||||||||||||| || ||||||||||| |||||    
T  26479618 aaaaaaatttggttttagtccctgcaaatatagaatatttggttttggtcctt 26479566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 6943997 - 6943926
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||||| | ||||||||||||||    |||||||||||||||||||| ||||||||| ||||| | ||||||    
T  6943997 tttagttcctgtaaaaatatttttttggttttagtccctgcaaatatgaaaaatttgattttggttcttgat 6943926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 103
Target Start/End: Complemental strand, 31186686 - 31186644
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||| |||| ||||||||||||||||| ||||||    
T  31186686 gttttagtccctgtaaatctaaaaaatttggttttggtccttg 31186644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 6891849 - 6891890
Alignment:
Q  62 ttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||||||||||||||| || ||||||||||| ||||||    
T  6891849 ttttagtccctgcaaatatagaatatttggttttggtccttg 6891890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 6943728 - 6943769
Alignment:
Q  62 ttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||||||||||||||| || ||||||||||| ||||||    
T  6943728 ttttagtccctgcaaatatagaatatttggttttggtccttg 6943769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 13154282 - 13154351
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| | ||||||||||||    ||||||||||||||||||||| || ||||| ||||| ||||||    
T  13154282 tttagtccctctaaaaatatttttttggttttagtccctgcaaatatagaatatttgattttggtccttg 13154351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 61 - 103
Target Start/End: Original strand, 36835 - 36877
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  36835 gttttagtccctgcaaatataaaaaatttggttttggtccttg 36877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 74254 - 74185
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||  |||||||||||    ||||||||||||||||||||||||||||||| |||| ||||||    
T  74254 tttagtccttcaaaaaatatttttttggttttagtccctgcaaatataaaaaatttggctttggtccttg 74185  T

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Target: scaffold0021 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 118368 - 118303
Alignment:
Q  42 gtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||| ||||||||||||||    ||||||||| |||||||||||||||||||||||||| ||||||    
T  118368 gtccctgtaaaaatatttttttggttttagtcactgcaaatataaaaaatttggttttggtccttg 118303  T

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Target: scaffold0126 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 36311 - 36265
Alignment:
Q  57 ttttgttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||||||| |||||||||||| || ||||||||||||||||||    
T  36311 ttttgttttagttcctgcaaatatagaatatttggttttgatccttg 36265  T

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Target: scaffold0126; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 36064 - 36108
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttgat 105  Q
    |||||||||| ||||||||||||||||||| ||||| || |||||    
T  36064 gttttagtccttgcaaatataaaaaatttgattttggtctttgat 36108  T

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Target: scaffold0167 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 103
Target Start/End: Complemental strand, 4700 - 4658
Alignment:
Q  61 gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    ||||||||||||||||||||| || ||||||||||| ||||||    
T  4700 gttttagtccctgcaaatatataatatttggttttggtccttg 4658  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 212752 - 212690
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttg 96  Q
    |||||||| | ||||||||||||    ||||||||||||||||||||| || |||||||||||    
T  212752 tttagtccctataaaaatatttttttggttttagtccctgcaaatatagaatatttggttttg 212690  T

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Target: scaffold0006; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 212455 - 212524
Alignment:
Q  38 tttagtccttgtaaaaatatttt----gttttagtccctgcaaatataaaaaatttggttttgatccttg 103  Q
    |||||||| ||||||||||||||    |||| |||||||||||||  ||||| |||||||||| ||||||    
T  212455 tttagtccctgtaaaaatatttttttggtttaagtccctgcaaattaaaaaattttggttttggtccttg 212524  T

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