View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16549_low_39 (Length: 313)

Name: NF16549_low_39
Description: NF16549
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16549_low_39
NF16549_low_39
[»] chr7 (25 HSPs)
chr7 (13-269)||(18873164-18873420)
chr7 (13-264)||(15167979-15168230)
chr7 (13-260)||(10895795-10896042)
chr7 (13-268)||(14422789-14423043)
chr7 (13-275)||(12709833-12710095)
chr7 (13-275)||(13122904-13123166)
chr7 (13-264)||(16009382-16009631)
chr7 (25-275)||(13743526-13743774)
chr7 (56-275)||(12590633-12590850)
chr7 (56-275)||(13007281-13007497)
chr7 (68-262)||(16677152-16677348)
chr7 (68-262)||(17651388-17651584)
chr7 (209-301)||(21230923-21231015)
chr7 (209-288)||(20311026-20311107)
chr7 (209-264)||(11382871-11382926)
chr7 (209-264)||(11389348-11389403)
chr7 (209-301)||(148619-148711)
chr7 (145-264)||(13679428-13679548)
chr7 (210-265)||(2971254-2971309)
chr7 (210-265)||(20906461-20906516)
chr7 (210-264)||(11311059-11311113)
chr7 (229-270)||(831628-831669)
chr7 (229-270)||(1196808-1196849)
chr7 (229-270)||(34958578-34958619)
chr7 (208-264)||(46625961-46626017)
[»] chr5 (15 HSPs)
chr5 (13-269)||(22750945-22751201)
chr5 (13-301)||(38144500-38144786)
chr5 (13-264)||(28370055-28370304)
chr5 (13-264)||(19512191-19512441)
chr5 (56-269)||(23528479-23528690)
chr5 (209-288)||(22438723-22438803)
chr5 (209-301)||(42961566-42961658)
chr5 (200-264)||(18407944-18408008)
chr5 (200-264)||(23111200-23111264)
chr5 (249-301)||(1856445-1856497)
chr5 (249-301)||(21674415-21674467)
chr5 (210-265)||(19236900-19236955)
chr5 (150-276)||(34830024-34830150)
chr5 (212-265)||(22461158-22461211)
chr5 (212-265)||(22467782-22467835)
[»] chr3 (24 HSPs)
chr3 (13-264)||(14762758-14763009)
chr3 (15-262)||(38310802-38311049)
chr3 (32-262)||(20247791-20248021)
chr3 (25-262)||(24192771-24193009)
chr3 (13-264)||(9534133-9534382)
chr3 (13-265)||(23370505-23370756)
chr3 (13-262)||(55499104-55499353)
chr3 (13-265)||(24933828-24934077)
chr3 (96-288)||(16801444-16801635)
chr3 (56-275)||(41455087-41455304)
chr3 (203-264)||(18929239-18929300)
chr3 (200-264)||(17240513-17240577)
chr3 (249-301)||(24122221-24122273)
chr3 (249-301)||(13967762-13967814)
chr3 (249-301)||(13973237-13973289)
chr3 (210-265)||(13302240-13302295)
chr3 (210-265)||(13323787-13323842)
chr3 (151-265)||(10389443-10389557)
chr3 (151-265)||(10414532-10414646)
chr3 (151-265)||(10421202-10421316)
chr3 (210-265)||(12033444-12033499)
chr3 (210-265)||(13312896-13312951)
chr3 (210-265)||(17131732-17131787)
chr3 (210-265)||(51301589-51301644)
[»] scaffold0026 (2 HSPs)
scaffold0026 (13-281)||(11834-12102)
scaffold0026 (13-265)||(111491-111741)
[»] chr6 (24 HSPs)
chr6 (31-264)||(23057760-23057993)
chr6 (13-275)||(29614136-29614398)
chr6 (13-264)||(23839003-23839253)
chr6 (13-301)||(18800242-18800529)
chr6 (13-275)||(10986170-10986431)
chr6 (29-264)||(4477678-4477912)
chr6 (130-275)||(930085-930229)
chr6 (13-262)||(21565214-21565462)
chr6 (56-275)||(12168212-12168428)
chr6 (56-275)||(19287121-19287337)
chr6 (56-275)||(19785859-19786075)
chr6 (56-275)||(19878305-19878521)
chr6 (56-275)||(19884081-19884297)
chr6 (76-265)||(34639986-34640173)
chr6 (76-265)||(34646660-34646847)
chr6 (209-301)||(24512807-24512899)
chr6 (151-265)||(25469704-25469816)
chr6 (68-264)||(9187352-9187550)
chr6 (208-264)||(25397172-25397228)
chr6 (208-264)||(19471335-19471391)
chr6 (208-264)||(25348486-25348542)
chr6 (181-265)||(31252394-31252478)
chr6 (208-262)||(25598643-25598697)
chr6 (250-301)||(933615-933666)
[»] scaffold1773 (1 HSPs)
scaffold1773 (13-272)||(983-1240)
[»] scaffold0006 (1 HSPs)
scaffold0006 (13-272)||(49984-50241)
[»] chr4 (13 HSPs)
chr4 (13-275)||(8045822-8046083)
chr4 (10-275)||(11847908-11848179)
chr4 (76-265)||(53483573-53483760)
chr4 (209-301)||(15408139-15408231)
chr4 (75-265)||(27906130-27906321)
chr4 (208-264)||(8834895-8834951)
chr4 (208-264)||(13888641-13888697)
chr4 (181-262)||(14486632-14486713)
chr4 (208-264)||(15245215-15245271)
chr4 (208-259)||(22724691-22724742)
chr4 (250-301)||(43284008-43284059)
chr4 (229-270)||(15747551-15747592)
chr4 (208-264)||(15308120-15308176)
[»] scaffold0029 (1 HSPs)
scaffold0029 (56-275)||(111728-111948)
[»] scaffold0924 (1 HSPs)
scaffold0924 (13-275)||(740-1002)
[»] chr2 (19 HSPs)
chr2 (13-264)||(19661454-19661703)
chr2 (13-264)||(6483523-6483772)
chr2 (13-264)||(6486990-6487239)
chr2 (68-275)||(26583687-26583892)
chr2 (13-262)||(23089057-23089305)
chr2 (13-262)||(23878813-23879060)
chr2 (13-264)||(23101463-23101713)
chr2 (11-265)||(5706023-5706274)
chr2 (250-301)||(6260135-6260186)
chr2 (200-264)||(23265133-23265197)
chr2 (200-264)||(23280201-23280265)
chr2 (203-264)||(21908353-21908414)
chr2 (257-301)||(19665037-19665081)
chr2 (208-264)||(24661576-24661632)
chr2 (210-265)||(10577-10632)
chr2 (84-275)||(23168288-23168483)
chr2 (84-275)||(23579545-23579740)
chr2 (210-265)||(25180929-25180984)
chr2 (193-274)||(26885166-26885246)
[»] scaffold0025 (1 HSPs)
scaffold0025 (25-262)||(14398-14635)
[»] chr8 (17 HSPs)
chr8 (13-262)||(8727735-8727984)
chr8 (13-275)||(23866418-23866680)
chr8 (13-265)||(44477428-44477678)
chr8 (13-265)||(44492586-44492836)
chr8 (13-301)||(27940815-27941104)
chr8 (56-275)||(17054440-17054656)
chr8 (155-264)||(18614217-18614327)
chr8 (209-301)||(14056527-14056619)
chr8 (200-264)||(23482053-23482117)
chr8 (209-297)||(25111976-25112064)
chr8 (249-301)||(30765873-30765925)
chr8 (208-264)||(39364919-39364975)
chr8 (210-264)||(29643386-29643440)
chr8 (210-265)||(24320670-24320725)
chr8 (240-300)||(21325730-21325791)
chr8 (241-300)||(21321132-21321192)
chr8 (208-264)||(21931696-21931752)
[»] scaffold0247 (1 HSPs)
scaffold0247 (13-301)||(11146-11433)
[»] chr1 (12 HSPs)
chr1 (13-264)||(20437024-20437274)
chr1 (56-275)||(41111884-41112100)
chr1 (200-264)||(32651563-32651627)
chr1 (209-264)||(19663517-19663572)
chr1 (200-264)||(18712790-18712854)
chr1 (208-264)||(20805320-20805376)
chr1 (209-264)||(11158093-11158148)
chr1 (208-262)||(10811785-10811839)
chr1 (210-265)||(20851132-20851187)
chr1 (210-265)||(20857759-20857814)
chr1 (210-265)||(21706276-21706331)
chr1 (210-265)||(21710818-21710873)
[»] scaffold0553 (1 HSPs)
scaffold0553 (13-265)||(10195-10446)
[»] scaffold0544 (1 HSPs)
scaffold0544 (13-265)||(1525-1776)
[»] scaffold0090 (1 HSPs)
scaffold0090 (13-301)||(17973-18261)
[»] scaffold0117 (2 HSPs)
scaffold0117 (13-275)||(1887-2148)
scaffold0117 (13-275)||(8564-8825)
[»] scaffold0058 (1 HSPs)
scaffold0058 (25-275)||(109-356)
[»] scaffold0154 (1 HSPs)
scaffold0154 (68-301)||(30715-30949)
[»] scaffold0476 (1 HSPs)
scaffold0476 (13-262)||(3295-3544)
[»] scaffold0077 (1 HSPs)
scaffold0077 (13-262)||(3624-3872)
[»] scaffold0796 (2 HSPs)
scaffold0796 (74-270)||(1727-1920)
scaffold0796 (74-270)||(5750-5943)
[»] scaffold0456 (4 HSPs)
scaffold0456 (182-269)||(904-991)
scaffold0456 (182-269)||(8049-8136)
scaffold0456 (25-121)||(806-901)
scaffold0456 (25-121)||(7951-8046)
[»] scaffold0634 (1 HSPs)
scaffold0634 (13-105)||(3466-3558)
[»] scaffold0107 (1 HSPs)
scaffold0107 (209-301)||(40495-40587)
[»] scaffold0129 (1 HSPs)
scaffold0129 (153-271)||(45268-45386)
[»] scaffold0019 (1 HSPs)
scaffold0019 (209-298)||(135473-135562)
[»] scaffold0235 (1 HSPs)
scaffold0235 (211-301)||(22556-22646)
[»] scaffold0310 (1 HSPs)
scaffold0310 (209-288)||(17643-17723)
[»] scaffold0222 (1 HSPs)
scaffold0222 (200-264)||(16811-16875)
[»] scaffold0004 (1 HSPs)
scaffold0004 (200-264)||(116887-116951)
[»] scaffold0124 (1 HSPs)
scaffold0124 (209-264)||(34276-34331)
[»] scaffold0461 (1 HSPs)
scaffold0461 (200-264)||(8-72)
[»] scaffold0249 (1 HSPs)
scaffold0249 (257-301)||(2212-2256)
[»] scaffold0146 (1 HSPs)
scaffold0146 (200-264)||(13623-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (200-264)||(101928-101992)
[»] scaffold0815 (1 HSPs)
scaffold0815 (213-275)||(1453-1515)
[»] scaffold0261 (1 HSPs)
scaffold0261 (75-275)||(23559-23760)
[»] scaffold2054 (1 HSPs)
scaffold2054 (176-275)||(680-780)
[»] scaffold0609 (1 HSPs)
scaffold0609 (181-265)||(5857-5941)
[»] scaffold0317 (1 HSPs)
scaffold0317 (145-264)||(1321-1441)
[»] scaffold0138 (1 HSPs)
scaffold0138 (208-264)||(12296-12352)
[»] scaffold0139 (1 HSPs)
scaffold0139 (209-264)||(14997-15052)
[»] scaffold0790 (1 HSPs)
scaffold0790 (243-276)||(5487-5520)
[»] scaffold0001 (1 HSPs)
scaffold0001 (193-274)||(493019-493099)
[»] scaffold0348 (2 HSPs)
scaffold0348 (250-298)||(14620-14668)
scaffold0348 (210-265)||(9336-9391)
[»] scaffold0096 (1 HSPs)
scaffold0096 (208-268)||(39503-39563)
[»] scaffold0034 (1 HSPs)
scaffold0034 (75-262)||(73149-73337)
[»] scaffold0127 (1 HSPs)
scaffold0127 (210-265)||(10239-10294)
[»] scaffold0023 (1 HSPs)
scaffold0023 (210-265)||(135438-135493)
[»] scaffold1318 (1 HSPs)
scaffold1318 (210-264)||(1913-1967)
[»] scaffold0453 (1 HSPs)
scaffold0453 (181-265)||(10550-10634)
[»] scaffold0335 (1 HSPs)
scaffold0335 (208-264)||(2628-2684)


Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 13 - 269
Target Start/End: Original strand, 18873164 - 18873420
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  18873164 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattat 18873263  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18873264 attacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 18873363  T
Q  213 tttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 269  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18873364 tttcagaaattatagattatgattatcgagagaaagtctcacccttaccttagtttt 18873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 13 - 264
Target Start/End: Original strand, 15167979 - 15168230
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  15167979 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattat 15168078  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168079 attacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 15168178  T
Q  213 tttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168179 tttcagaaattatagattatgattatcgagagatagtctcacccttacctta 15168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 13 - 260
Target Start/End: Complemental strand, 10896042 - 10895795
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  10896042 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattat 10895943  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaa 211  Q
    ||||||| |||||||||||||| | |||||| ||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  10895942 attacaagagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaa 10895844  T
Q  212 ttttcagaaattatagattatgattatcgagagatagtctcacccttac 260  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||    
T  10895843 ttttcaaaaattatagattatgattattgagagatagtctcacccttac 10895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 13 - 268
Target Start/End: Original strand, 14422789 - 14423043
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||| |||||||||||||||||||| |||||||     
T  14422789 catcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattac 14422887  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaa 211  Q
    |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14422888 attacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaa 14422986  T
Q  212 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttt 268  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14422987 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt 14423043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 13 - 275
Target Start/End: Complemental strand, 12710095 - 12709833
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataa-ttctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacatta 111  Q
    |||||||||||||||||||||||||||||||| ||||||| |||  ||||| |||| |||||||||||||||| |||||||||||  |||||||||||||    
T  12710095 catcatacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaaca-agattaagtttatattctgaacatta 12709997  T
Q  112 tattacaac-agaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtca 210  Q
    ||||||||  |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12709996 tattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtca 12709897  T
Q  211 attttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 275  Q
    | |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12709896 a-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 12709833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 13 - 275
Target Start/End: Complemental strand, 13123166 - 13122904
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataa-ttctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacatta 111  Q
    |||||||||||||||||||||||||||||||| ||||||| |||  ||||| |||| |||||||||||||||| |||||||||||  |||||||||||||    
T  13123166 catcatacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaaca-agattaagtttatattctgaacatta 13123068  T
Q  112 tattacaac-agaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtca 210  Q
    ||||||||  |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13123067 tattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtca 13122968  T
Q  211 attttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 275  Q
    | |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13122967 a-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 13122904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 13 - 264
Target Start/End: Original strand, 16009382 - 16009631
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||  |||||||| ||||||| |||||||||||| |||||  |||||||||||||||||||| |||||||     
T  16009382 catcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcagtttatgatcacaacaacagtatagattaagttttcattctaaacattac 16009480  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
    |||||||||||||||||||||| | |||||||| |||| |||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||    
T  16009481 attacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccttaacccacaatttatcttccaaaaccatgcaattaggtcaat 16009579  T
Q  213 tttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16009580 tttcagaaattatagattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 25 - 275
Target Start/End: Original strand, 13743526 - 13743774
Alignment:
Q  25 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaa 124  Q
    ||||||||||| |||||| |   ||||||| |||| ||||||||||||||||||| |||||||||||||| |||| ||||||||  ||| ||||| | ||    
T  13743526 attcatcaatttatccaaccaagcataatt-tcaaccaatttatgatcacagcaataacatagattaagtcttcaatctgaacagcataatacaagaaaa 13743624  T
Q  125 ttaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaatta 224  Q
    |||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||    
T  13743625 ttaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcaggaatta 13743723  T
Q  225 tagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 275  Q
    || ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13743724 taaattatgattattgagagatagtctcacccttaccttagttttgcagaa 13743774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 56 - 275
Target Start/End: Complemental strand, 12590850 - 12590633
Alignment:
Q  56 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 154  Q
    |||||||||| ||| || ||||||||||||| ||||||| ||||||||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  12590850 tcaatcaattaatggattacagcaacaacatggattaagctttcattcttaacattaaattccaagaaaactaacatcatctttactcatt--ccatcag 12590753  T
Q  155 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 254  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  12590752 aatcatcatcaaaccctaactttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 12590654  T
Q  255 ccttaccttagttttgcagaa 275  Q
    |||||||||||||||||||||    
T  12590653 ccttaccttagttttgcagaa 12590633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 56 - 275
Target Start/End: Original strand, 13007281 - 13007497
Alignment:
Q  56 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 154  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  13007281 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 13007377  T
Q  155 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 254  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  13007378 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 13007476  T
Q  255 ccttaccttagttttgcagaa 275  Q
    |||||||||||||||||||||    
T  13007477 ccttaccttagttttgcagaa 13007497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 68 - 262
Target Start/End: Original strand, 16677152 - 16677348
Alignment:
Q  68 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 167  Q
    ||||||||||||||  |||||||| |  |||||||||||||| |  |||||||| | |||||||||| ||||| |  | | | ||| |||||||||||||    
T  16677152 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 16677251  T
Q  168 ccctaaccctcaattt-atcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 262  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  16677252 ccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 68 - 262
Target Start/End: Original strand, 17651388 - 17651584
Alignment:
Q  68 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 167  Q
    ||||||||||||||  |||||||| |  |||||||||||||| |  |||||||| | |||||||||| ||||| |  | | | ||| |||||||||||||    
T  17651388 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 17651487  T
Q  168 ccctaaccctcaattt-atcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 262  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  17651488 ccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 209 - 301
Target Start/End: Complemental strand, 21231015 - 21230923
Alignment:
Q  209 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| ||||||||| |||| ||||||| ||||||||||||    
T  21231015 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaaagattgcacagcaaaatcggttccta 21230923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 209 - 288
Target Start/End: Complemental strand, 20311107 - 20311026
Alignment:
Q  209 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag--ttttgcagaatgattacacagca 288  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||  |||||||||| |||| |||||||    
T  20311107 caattttcagaaattatacgttatgattattgagagatagtctcacccttaccttagatttttgcagaaagattgcacagca 20311026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 11382926 - 11382871
Alignment:
Q  209 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  11382926 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 11389403 - 11389348
Alignment:
Q  209 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  11389403 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 301
Target Start/End: Original strand, 148619 - 148711
Alignment:
Q  209 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    |||||||||||||  ||| ||||| || || ||  | ||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  148619 caattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttagttttgcagaatgattacacaacacaatcagttccta 148711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 264
Target Start/End: Original strand, 13679428 - 13679548
Alignment:
Q  145 ttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgaga 243  Q
    |||| |||| ||||| |||||||||||||  |||| ||| ||| || | ||| ||  |||||| |||||||||| |||||||| || ||||| || || |    
T  13679428 ttcctttcaaaatcagcatcaaaccctaattctcagttttatcatcaagaacaatttaattagatcaattttcaaaaattatatatcatgatcattgaaa 13679527  T
Q  244 gatagtctcacccttacctta 264  Q
    |||||||||||||||||||||    
T  13679528 gatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 2971254 - 2971309
Alignment:
Q  210 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  2971254 aattttcagaaattataaattatgactattgaaagataatcccacccttaccttag 2971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 20906516 - 20906461
Alignment:
Q  210 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  20906516 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20906461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 264
Target Start/End: Original strand, 11311059 - 11311113
Alignment:
Q  210 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    |||||| ||||||| || | ||| ||||| |||||||||||||||||||||||||    
T  11311059 aatttttagaaattctacactattattattgagagatagtctcacccttacctta 11311113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 831669 - 831628
Alignment:
Q  229 ttatgattatcgagagatagtctcacccttaccttagttttg 270  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  831669 ttataattattgagagttagtctcacccttaccttagttttg 831628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 1196849 - 1196808
Alignment:
Q  229 ttatgattatcgagagatagtctcacccttaccttagttttg 270  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  1196849 ttataattattgagagttagtctcacccttaccttagttttg 1196808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 34958578 - 34958619
Alignment:
Q  229 ttatgattatcgagagatagtctcacccttaccttagttttg 270  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  34958578 ttataattattgagagttagtctcacccttaccttagttttg 34958619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 46625961 - 46626017
Alignment:
Q  208 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||||| ||||||||| ||||| || || ||||| |||||||||||||| ||||    
T  46625961 tcaattttccgaaattatatattataatcattgagagttagtctcacccttatctta 46626017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 229; Significance: 1e-126; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 13 - 269
Target Start/End: Original strand, 22750945 - 22751201
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  22750945 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattat 22751044  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22751045 attacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 22751144  T
Q  213 tttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 269  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22751145 tttcagaaattatagattatgattatcgagagaaagtctcacccttaccttagtttt 22751201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 13 - 301
Target Start/End: Complemental strand, 38144786 - 38144500
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||  || ||||| |||||||||||||||||||| |||||  |||||||||||||||||||| |||||||     
T  38144786 catcatacaaatcttcatcaattcatccaatcaatcgtaatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattac 38144688  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
    ||||||| |||||||||||||| | |||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  38144687 attacaatagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttccaaaattatgcaattaggtcaat 38144589  T
Q  213 tttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38144588 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 38144500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 13 - 264
Target Start/End: Complemental strand, 28370304 - 28370055
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    ||||||||| |  ||||||||||||||| |||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| |||||||     
T  28370304 catcatacaaatcttcatcaattcatcccatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattac 28370206  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
     ||||||||||||||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28370205 gttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaat 28370107  T
Q  213 tttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  28370106 tttcagaaattatagattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 13 - 264
Target Start/End: Original strand, 19512191 - 19512441
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| |||||||     
T  19512191 catcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattac 19512289  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaa 211  Q
     |||||| |||||||||||||| | |||||||| |||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19512290 gttacaatagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaa 19512388  T
Q  212 ttttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19512389 ttttcagaaattatagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 56 - 269
Target Start/End: Original strand, 23528479 - 23528690
Alignment:
Q  56 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 154  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  23528479 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaaaactaacatcatccttactcatt--ccatcag 23528576  T
Q  155 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 254  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  23528577 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 23528675  T
Q  255 ccttaccttagtttt 269  Q
    |||||||||||||||    
T  23528676 ccttaccttagtttt 23528690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 209 - 288
Target Start/End: Complemental strand, 22438803 - 22438723
Alignment:
Q  209 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag-ttttgcagaatgattacacagca 288  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||| |||| |||||||    
T  22438803 caattttcagaaattatacattatgattattgagagatagtctcacccttaccttagattttgcagaaagattgcacagca 22438723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 209 - 301
Target Start/End: Original strand, 42961566 - 42961658
Alignment:
Q  209 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    |||||||||||||| ||| ||||| || || ||  | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42961566 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 42961658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 18408008 - 18407944
Alignment:
Q  200 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  18408008 caattagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 23111264 - 23111200
Alignment:
Q  200 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23111264 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 1856497 - 1856445
Alignment:
Q  249 tctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  1856497 tctcacccttaccttagttttgcagaaagattaaacagcacaatcggttccta 1856445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 21674467 - 21674415
Alignment:
Q  249 tctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  21674467 tctcacccttaccttagttttgcagaaagattaaacagcacaatcggttccta 21674415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 19236900 - 19236955
Alignment:
Q  210 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  19236900 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 19236955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 276
Target Start/End: Original strand, 34830024 - 34830150
Alignment:
Q  150 ttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatag 248  Q
    |||| ||||| ||||| |||||||  |||||||| |||||| | |||||| | ||||| |  |||||||||||||||| ||||  ||||| || |||||     
T  34830024 ttcaaaatcagcatcataccctaattctcaattttatcttcaagaactattctattagattgattttcagaaattatacatta-aattattgaaagataa 34830122  T
Q  249 tctcacccttaccttagttttgcagaat 276  Q
    || ||||||||||||||  |||||||||    
T  34830123 tcccacccttaccttagaattgcagaat 34830150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 22461158 - 22461211
Alignment:
Q  212 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  22461158 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22461211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 22467782 - 22467835
Alignment:
Q  212 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  22467782 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22467835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 228; Significance: 1e-126; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 13 - 264
Target Start/End: Complemental strand, 14763009 - 14762758
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  14763009 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattat 14762910  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762909 attacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 14762810  T
Q  213 tttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762809 tttcagaaattatagattatgattatcgagagatagtctcacccttacctta 14762758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 15 - 262
Target Start/End: Complemental strand, 38311049 - 38310802
Alignment:
Q  15 tcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatat 114  Q
    ||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  38311049 tcatacacaaattcatccattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatat 38310950  T
Q  115 tacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattt 214  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  38310949 tacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatat 38310850  T
Q  215 tcagaaattatagattatgattatcgagagatagtctcacccttacct 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38310849 tcagaaattatagattatgattatcgagagatagtctcacccttacct 38310802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 32 - 262
Target Start/End: Complemental strand, 20248021 - 20247791
Alignment:
Q  32 aattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacat 131  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| | |||||||||    
T  20248021 aattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagaaaattaacat 20247922  T
Q  132 gattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagatta 231  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247921 gatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagatta 20247822  T
Q  232 tgattatcgagagatagtctcacccttacct 262  Q
    ||||||| |||||||||||||||||||||||    
T  20247821 tgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 25 - 262
Target Start/End: Original strand, 24192771 - 24193009
Alignment:
Q  25 attcatcaattcatccaatcgctcataattctcaatcaatttatgat-cacagcaacaacatagattaagttttcattctgaacattatattacaacaga 123  Q
    ||||||||||| ||||||||  ||||| || ||||||| |||||||| |||||||||| ||||||||||||||||||||||||||| | |||||||||||    
T  24192771 attcatcaatttatccaatcaatcatattt-tcaatcagtttatgattcacagcaacagcatagattaagttttcattctgaacatcacattacaacaga 24192869  T
Q  124 attaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaattttcagaaat 222  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24192870 attaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaat 24192969  T
Q  223 tatagattatgattatcgagagatagtctcacccttacct 262  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  24192970 tatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 13 - 264
Target Start/End: Original strand, 9534133 - 9534382
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||  |||||  |||||||||||||||||||| |||||||     
T  9534133 catcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacgacaacagtatagattaagttttcattctaaacattac 9534231  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
    |||||||||||||||||||||| | |||||||| | || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9534232 attacaacagaattaacatgatcaatacccattccact-cagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaat 9534330  T
Q  213 tttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9534331 tttcagaaattatagattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 13 - 265
Target Start/End: Complemental strand, 23370756 - 23370505
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| |||||||     
T  23370756 catcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattac 23370658  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaa 211  Q
    |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  23370657 attacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaa 23370559  T
Q  212 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  23370558 ttttcagaaattatagattatgattattgagagatagtcccacccttaccttag 23370505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 13 - 262
Target Start/End: Complemental strand, 55499353 - 55499104
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    ||||||||| || || ||||||||||||||||  | ||| || |||||||||||||||||||||||||   |||||||||| |||||||| |||||| |     
T  55499353 catcatacaaaacttgatcaattcatccaatcaattatattt-tcaatcaatttatgatcacagcaactgtatagattaagatttcattccgaacatcac 55499255  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaa 211  Q
    ||||||||| |||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| |||||| | |||   || ||| |||||||||    
T  55499254 attacaacataattaacatgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatcct-caaggttaagcagttaggtcaa 55499157  T
Q  212 tttt-cagaaattatagattat-gattatcgagagatagtctcacccttacct 262  Q
    |||| | ||||||| | |||||  ||||  |||||||||||||||||||||||    
T  55499156 ttttcccgaaattacatattatctattaatgagagatagtctcacccttacct 55499104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 13 - 265
Target Start/End: Complemental strand, 24934077 - 24933828
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacatta 111  Q
    ||||||||| | |||||||||||||| ||||   ||| || | |||||||||| ||| ||  |||||||||||| ||||||| ||||||||| |||||||    
T  24934077 catcatacaaatattcatcaattcatacaatacatcaaaaat-tcaatcaattaatggattgcagcaacaacatggattaagctttcattcttaacatta 24933979  T
Q  112 tattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaa 211  Q
     ||| | | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||   |||  |||| |||||||||||| ||||||||||||    
T  24933978 aattccgagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaa 24933881  T
Q  212 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24933880 ttt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 24933828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 96 - 288
Target Start/End: Complemental strand, 16801635 - 16801444
Alignment:
Q  96 ttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaa 194  Q
    |||||||| ||||| | |||||| || | |||||||||| ||||| |  ||| | ||| |||||||||||| |||||||| ||||||| |||||| |||     
T  16801635 ttcattctaaacatcacattacagcatatttaacatgatcattacaccattctcctcaaaatcatcatcaa-ccctaaccttcaattttatcttcaaaag 16801537  T
Q  195 ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagca 288  Q
    ||| ||||| |||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16801536 ctaagcaatcaggtcaattttcagaaattatatat-atgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagca 16801444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 56 - 275
Target Start/End: Complemental strand, 41455304 - 41455087
Alignment:
Q  56 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 154  Q
    |||||||||| ||| || |||||||| | || ||||||| |||||||||  |||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  41455304 tcaatcaattcatggattacagcaaccatatggattaagatttcattcttgacattaaatttcaagaaaactaacatcatctttactcatt--ccatcag 41455207  T
Q  155 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 254  Q
    |||||||||||| ||||||   |||   ||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  41455206 aatcatcatcaatccctaattttcatcctattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 41455108  T
Q  255 ccttaccttagttttgcagaa 275  Q
    |||||||||||||||||||||    
T  41455107 ccttaccttagttttgcagaa 41455087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 18929239 - 18929300
Alignment:
Q  203 ttaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    |||| ||||||||||||||||||| || |||||||| |||||||||||||||||||||||||    
T  18929239 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 17240577 - 17240513
Alignment:
Q  200 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||| ||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  17240577 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 24122273 - 24122221
Alignment:
Q  249 tctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  24122273 tctcacccttaccttagttttgcagaaagattaaacagcacaatcggttccta 24122221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 13967814 - 13967762
Alignment:
Q  249 tctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    ||||||||||||||||||||||||||| ||| | |||||||||||||||||||    
T  13967814 tctcacccttaccttagttttgcagaaagataaaacagcacaatcggttccta 13967762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 13973289 - 13973237
Alignment:
Q  249 tctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    ||||||||||||||||||||||||||| ||| | |||||||||||||||||||    
T  13973289 tctcacccttaccttagttttgcagaaagataaaacagcacaatcggttccta 13973237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 13302295 - 13302240
Alignment:
Q  210 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||| | ||||||||||| || ||||| |||||||||||||||||    
T  13302295 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13302240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 13323842 - 13323787
Alignment:
Q  210 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||| | ||||||||||| || ||||| |||||||||||||||||    
T  13323842 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13323787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 265
Target Start/End: Complemental strand, 10389557 - 10389443
Alignment:
Q  151 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtc 250  Q
    |||||||||||||||||||||||   |||  ||||  |  |||||||| ||||||| | | ||||||||||||||| ||||| || || || ||||| ||    
T  10389557 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10389458  T
Q  251 tcacccttaccttag 265  Q
     ||||||||||||||    
T  10389457 ccacccttaccttag 10389443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 265
Target Start/End: Complemental strand, 10414646 - 10414532
Alignment:
Q  151 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtc 250  Q
    |||||||||||||||||||||||   |||  ||||  |  |||||||| ||||||| | | ||||||||||||||| ||||| || || || ||||| ||    
T  10414646 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10414547  T
Q  251 tcacccttaccttag 265  Q
     ||||||||||||||    
T  10414546 ccacccttaccttag 10414532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 265
Target Start/End: Complemental strand, 10421316 - 10421202
Alignment:
Q  151 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtc 250  Q
    |||||||||||||||||||||||   |||  ||||  |  |||||||| ||||||| | | ||||||||||||||| ||||| || || || ||||| ||    
T  10421316 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10421217  T
Q  251 tcacccttaccttag 265  Q
     ||||||||||||||    
T  10421216 ccacccttaccttag 10421202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 12033499 - 12033444
Alignment:
Q  210 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  12033499 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 12033444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 13312951 - 13312896
Alignment:
Q  210 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    |||||||| |||||| | ||||||||||| || ||||| |||||||||||||||||    
T  13312951 aattttcaaaaattacatattatgattattgaaagataatctcacccttaccttag 13312896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 17131732 - 17131787
Alignment:
Q  210 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  17131732 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 17131787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 51301589 - 51301644
Alignment:
Q  210 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||| | ||||||||||| |  ||||| |||||||||||||||||    
T  51301589 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 51301644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 221; Significance: 1e-121; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 13 - 281
Target Start/End: Complemental strand, 12102 - 11834
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    |||||||||||||||||||||||||||||||| ||||||| | |||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||    
T  12102 catcatacacaaattcatcaattcatccaatcactcataaatttcaatcaacttatgatcacagcaacaacaaagattaagttttcattctgaagattat 12003  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  12002 attacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaactctcaatttattttccaaaactatgcaattaggtcaat 11903  T
Q  213 tttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgatta 281  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  11902 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaagatta 11834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 13 - 265
Target Start/End: Original strand, 111491 - 111741
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| |||||||     
T  111491 catcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattac 111589  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
    |||||||||||||||||||||| | |||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  111590 attacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaat 111688  T
Q  213 tttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  111689 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 111741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 206; Significance: 1e-112; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 31 - 264
Target Start/End: Original strand, 23057760 - 23057993
Alignment:
Q  31 caattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaaca 130  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  23057760 caattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaaca 23057859  T
Q  131 tgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagatt 230  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23057860 tgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcaggaattatagatt 23057959  T
Q  231 atgattatcgagagatagtctcacccttacctta 264  Q
    ||||||||||||||||||||||||||||||||||    
T  23057960 atgattatcgagagatagtctcacccttacctta 23057993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 13 - 275
Target Start/End: Complemental strand, 29614398 - 29614136
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    ||||||||||||||||||||||||||||||||  |||||| | |||||||| |||||||||||||||||||| |||||||||||||||||| ||||||      
T  29614398 catcatacacaaattcatcaattcatccaatcattcataaatttcaatcaagttatgatcacagcaacaacaaagattaagttttcattctaaacattca 29614299  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatctt-ccaaaactatgcaattaggtcaa 211  Q
    || |||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||| ||||||| ||||||||    
T  29614298 at-acaagagaattaacatgatcattacccatttcccttcataatcatcatcaaaccctaaccctcaatttatttttccaaaattatgcaactaggtcaa 29614200  T
Q  212 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 275  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29614199 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 29614136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 13 - 264
Target Start/End: Original strand, 23839003 - 23839253
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  ||||||||||||||||||||||||||||     
T  23839003 catcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattac 23839101  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaa-actatgcaattaggtcaa 211  Q
    |||||||||||||||||||||| | |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23839102 attacaacagaattaacatgatcaatacccattcccctt-agaatcatcatcaaaccctaaccctcaatttatcttccaaacactatgcaattaggtcaa 23839200  T
Q  212 ttttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23839201 ttttcagaaattatagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 13 - 301
Target Start/End: Original strand, 18800242 - 18800529
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    ||||||||  || |||||||||||||||||||  | ||| || ||||||||||| |||||||| |||||| |||||||||| ||||||| ||||||| |     
T  18800242 catcataccaaacttcatcaattcatccaatcaattatattt-tcaatcaatttgtgatcacaacaacaatatagattaagatttcattttgaacatcac 18800340  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatt-tatcttccaaaactatgcaattaggtcaa 211  Q
    |||||||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||    
T  18800341 attacaacagaattaacatgatcattactcatt-ccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaa 18800439  T
Q  212 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||    
T  18800440 ttttcagaaattatagattatgattattgagagatagtctcacccttacattagttttgcagaaggattacacagcaaaatcggttccta 18800529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 13 - 275
Target Start/End: Complemental strand, 10986431 - 10986170
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||  || ||||| |||||||||||||||||||| |||||  ||||||||||||||||||||||||||||     
T  10986431 catcatacaaatcttcatcaattcatccaatcaatcgtaatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattac 10986333  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaa 211  Q
    |||||||||||||||||||||| | |||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10986332 attacaacagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaa 10986234  T
Q  212 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 275  Q
    |||| |||||||||||||||||||||| || |||||||||||||||||||||||  ||||||||    
T  10986233 tttttagaaattatagattatgattattgaaagatagtctcacccttaccttagaattgcagaa 10986170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 29 - 264
Target Start/End: Original strand, 4477678 - 4477912
Alignment:
Q  29 atcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaa 128  Q
    ||||| ||||||||||  |||||||| |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| |||||||||||||||     
T  4477678 atcaaatcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaattag 4477776  T
Q  129 catgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaattatag 227  Q
    |||||| | |||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4477777 catgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatag 4477875  T
Q  228 attatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||||||| |||||||||||||||||||||||||    
T  4477876 attatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 130 - 275
Target Start/End: Complemental strand, 930229 - 930085
Alignment:
Q  130 atgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagat 229  Q
    ||||| |||||||||| |||||||||| |||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| |||||||    
T  930229 atgatcattacccatt-cccttcagaaacatcatcaaaccctaaccctcaatttatttttcaaaactatacaattaggtcaattttcagaaactatagat 930131  T
Q  230 tatgattatcgagagatagtctcacccttaccttagttttgcagaa 275  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  930130 tatgattattgagagatagtctcacccttaccttagttttgcagaa 930085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 13 - 262
Target Start/End: Complemental strand, 21565462 - 21565214
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    ||||||||| || |||||||||||||||||||  | ||| || ||||||||||||||||||||||||||  |||||||||| |||||||| |||| | |     
T  21565462 catcatacagaacttcatcaattcatccaatcaattatattt-tcaatcaatttatgatcacagcaacagtatagattaagatttcattccgaacgtcac 21565364  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaa 211  Q
    ||||||||| |||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||| |||||| | |||   || |||||||||||||    
T  21565363 attacaacataattaacatgatcattacccattcccctt-agaatcatcatcaaaccctaaccctcaattttatcct-caaggttaagcaattaggtcaa 21565266  T
Q  212 ttttcagaaattatagattat-gattatcgagagatagtctcacccttacct 262  Q
    ||||| ||||||| | |||||  ||||  |||||||||||||||||||||||    
T  21565265 ttttccgaaattaaatattatctattaatgagagatagtctcacccttacct 21565214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 56 - 275
Target Start/End: Original strand, 12168212 - 12168428
Alignment:
Q  56 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 154  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  12168212 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 12168308  T
Q  155 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 254  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  12168309 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 12168407  T
Q  255 ccttaccttagttttgcagaa 275  Q
    |||||||||||||||||||||    
T  12168408 ccttaccttagttttgcagaa 12168428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 56 - 275
Target Start/End: Original strand, 19287121 - 19287337
Alignment:
Q  56 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 154  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  19287121 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 19287217  T
Q  155 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 254  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  19287218 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19287316  T
Q  255 ccttaccttagttttgcagaa 275  Q
    |||||||||||||||||||||    
T  19287317 ccttaccttagttttgcagaa 19287337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 56 - 275
Target Start/End: Complemental strand, 19786075 - 19785859
Alignment:
Q  56 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 154  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  19786075 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 19785979  T
Q  155 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 254  Q
    ||||||||||||||||||||  ||| ||||| |||||||||||| ||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  19785978 aatcatcatcaaaccctaactttcattttattttccaaaactattcaactaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19785880  T
Q  255 ccttaccttagttttgcagaa 275  Q
    |||||||||||||||||||||    
T  19785879 ccttaccttagttttgcagaa 19785859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 56 - 275
Target Start/End: Original strand, 19878305 - 19878521
Alignment:
Q  56 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 154  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  19878305 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 19878401  T
Q  155 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 254  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  19878402 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19878500  T
Q  255 ccttaccttagttttgcagaa 275  Q
    |||||||||||||||||||||    
T  19878501 ccttaccttagttttgcagaa 19878521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 56 - 275
Target Start/End: Original strand, 19884081 - 19884297
Alignment:
Q  56 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 154  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  19884081 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 19884177  T
Q  155 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 254  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  19884178 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19884276  T
Q  255 ccttaccttagttttgcagaa 275  Q
    ||| |||||||||||||||||    
T  19884277 cctaaccttagttttgcagaa 19884297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 76 - 265
Target Start/End: Complemental strand, 34640173 - 34639986
Alignment:
Q  76 gcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaacc 175  Q
    |||||||||| ||||||||||||||||| ||| ||| |||   | | || |||||| ||  |||| ||||  || |||||| ||||||||||||||||      
T  34640173 gcaacaacatggattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttactcatt--ccatcagaaccatcatcaaaccctaatt 34640076  T
Q  176 ctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
     ||   |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  34640075 ttcttattattttccaaaactattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34639986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 76 - 265
Target Start/End: Complemental strand, 34646847 - 34646660
Alignment:
Q  76 gcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaacc 175  Q
    |||||||||| ||||||||||||||||| ||| ||| |||   | | || |||||| ||  |||| ||||  || |||||| ||||||||||||||||      
T  34646847 gcaacaacatggattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttactcatt--ccatcagaaccatcatcaaaccctaatt 34646750  T
Q  176 ctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
     ||   |||| |||||||| ||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  34646749 ttcttattattttccaaaattattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34646660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 209 - 301
Target Start/End: Complemental strand, 24512899 - 24512807
Alignment:
Q  209 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||| ||||||| ||||||||| |||| ||||||| ||||||||||||    
T  24512899 caattttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttgcagaaagattgcacagcaaaatcggttccta 24512807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 151 - 265
Target Start/End: Complemental strand, 25469816 - 25469704
Alignment:
Q  151 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtc 250  Q
    ||||||| |||||||||||||||   |||  |||| ||||||||| || ||||||||||||||| ||||| ||||||||||||||||| |||||||||||    
T  25469816 tcagaattatcatcaaaccctaattttcatattattttccaaaaccattcaattaggtcaattt-cagaa-ttatagattatgattattgagagatagtc 25469719  T
Q  251 tcacccttaccttag 265  Q
    |||||||||||||||    
T  25469718 tcacccttaccttag 25469704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 264
Target Start/End: Original strand, 9187352 - 9187550
Alignment:
Q  68 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 167  Q
    |||||||| |||||  ||||||||||   |||||||||||| || ||||||||| | | ||||||||| ||||    |||| |||| ||||| ||||||     
T  9187352 tgatcacaacaacattatagattaagaaatcattctgaacactaaattacaacacattaaacatgattcttacatcattcctttcaaaatcagcatcaa- 9187450  T
Q  168 ccctaaccctcaattt--atcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||  | ||||||  || ||| | ||| || ||||||| || ||||| ||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  9187451 ccctaattcccaatttttatattcaagaacaattcaattagatctatttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 25397172 - 25397228
Alignment:
Q  208 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  25397172 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 25397228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 19471391 - 19471335
Alignment:
Q  208 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||| ||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  19471391 tcaatttccagaaattatatattatgatcatcgagaggtagcctcacccttacctta 19471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 25348486 - 25348542
Alignment:
Q  208 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    |||||||||||||||| || | ||| ||||| |||||||||||||||||||||||||    
T  25348486 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 25348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 31252394 - 31252478
Alignment:
Q  181 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    ||||||||| | |||||| ||||||| | ||||||||||||||||| ||||| || ||  | ||||| |||||||||||||||||    
T  31252394 tttatcttcaagaactattcaattagattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttag 31252478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 25598643 - 25598697
Alignment:
Q  208 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 262  Q
    |||||||||||||| |||| |||||||| || ||||| |||||||||||||||||    
T  25598643 tcaattttcagaaaatatatattatgatcattgagagttagtctcacccttacct 25598697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 301
Target Start/End: Complemental strand, 933666 - 933615
Alignment:
Q  250 ctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    |||||||||||||||| ||||||||| |||| || |||| ||||||||||||    
T  933666 ctcacccttaccttagatttgcagaaagattgcatagcaaaatcggttccta 933615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 13 - 272
Target Start/End: Original strand, 983 - 1240
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    |||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  983 catcatacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaaca-agattaagttttcattctgaacattat 1081  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
    ||||||| |||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  1082 attacaagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa- 1180  T
Q  213 tttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgca 272  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1181 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgca 1240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 13 - 272
Target Start/End: Original strand, 49984 - 50241
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    |||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  49984 catcatacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaaca-agattaagttttcattctgaacattat 50082  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
    ||||||| |||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  50083 attacaagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa- 50181  T
Q  213 tttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgca 272  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  50182 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgca 50241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 203; Significance: 1e-111; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 13 - 275
Target Start/End: Complemental strand, 8046083 - 8045822
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    |||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  8046083 catcatacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaaggattaagttttcattctgaacattat 8045984  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
    ||||||| ||||||||||| ||  |||||||||||||||||||||  || ||||||||||||||||||||||| |||||||||||||||||||||||||     
T  8045983 attacaagagaattaacattatctttacccatttcccttcagaattctcgtcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa- 8045885  T
Q  213 tttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8045884 tttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 8045822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 10 - 275
Target Start/End: Original strand, 11847908 - 11848179
Alignment:
Q  10 catcatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacat 109  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11847908 catcatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacat 11848007  T
Q  110 tatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa------tttatcttccaaaactatgcaat 203  Q
    ||||||| || || ||||||||||| |||||||||| | |||||||||| |||||||||||||||||||||      || || || ||||||||||| |     
T  11848008 tatattataaaaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattgattttaatttttcaaaactatgccac 11848107  T
Q  204 taggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 275  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11848108 taggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 11848179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 76 - 265
Target Start/End: Original strand, 53483573 - 53483760
Alignment:
Q  76 gcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaacc 175  Q
    |||||||||| ||||||||||||||||| ||| ||| |||   | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||      
T  53483573 gcaacaacatggattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaatt 53483670  T
Q  176 ctca-atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
     ||| |||  | ||| |||||||| |||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  53483671 ttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctcacccttaccttag 53483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 209 - 301
Target Start/End: Original strand, 15408139 - 15408231
Alignment:
Q  209 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| | ||||||| |||| ||||| | ||||||||||||    
T  15408139 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatctgcagaaagattgcacagaaaaatcggttccta 15408231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 265
Target Start/End: Original strand, 27906130 - 27906321
Alignment:
Q  75 agcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaac 174  Q
    |||||||  ||||||||||   |||| | |||||| | ||||||||| | | ||||||||| |||| | ||| | |||| ||||| ||||| |||||||     
T  27906130 agcaacattatagattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccttttctttcaaaatcaacatcacaccctaat 27906229  T
Q  175 cctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
     |||||||| |||||| | |||||| | ||||  | ||||||||||||||||| |||||||| || || ||||| || |||||||| |||||    
T  27906230 tctcaattttatcttcaagaactattctattatattaattttcagaaattatacattatgatcattgaaagataatcccacccttatcttag 27906321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 8834895 - 8834951
Alignment:
Q  208 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  8834895 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 8834951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 13888641 - 13888697
Alignment:
Q  208 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  13888641 tcaattttcagaaattatacattatgatcattgagagttagcctcacccttacctta 13888697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 14486632 - 14486713
Alignment:
Q  181 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 262  Q
    ||||||||| | ||| || ||||| | | ||||||||||||||||| |||||||| || ||  |||||||||||||||||||    
T  14486632 tttatcttcaagaacaattcaattcgattaattttcagaaattatatattatgatcattgaaggatagtctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 15245215 - 15245271
Alignment:
Q  208 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||||||||||||||| |||| ||| || ||||| ||| |||||||||||||||    
T  15245215 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttacctta 15245271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 259
Target Start/End: Complemental strand, 22724742 - 22724691
Alignment:
Q  208 tcaattttcagaaattatagattatgattatcgagagatagtctcaccctta 259  Q
    |||||||||||||||| || | ||| ||||| ||||||||||||||||||||    
T  22724742 tcaattttcagaaattctatactattattattgagagatagtctcaccctta 22724691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 301
Target Start/End: Complemental strand, 43284059 - 43284008
Alignment:
Q  250 ctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    |||||||||||||||| ||||||||| |||| ||||||  ||||||||||||    
T  43284059 ctcacccttaccttagatttgcagaaagattgcacagcgaaatcggttccta 43284008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 15747592 - 15747551
Alignment:
Q  229 ttatgattatcgagagatagtctcacccttaccttagttttg 270  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  15747592 ttataattattgagagttagtctcacccttaccttagttttg 15747551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 15308120 - 15308176
Alignment:
Q  208 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||||||||||||||| |||| ||| || ||||| ||| |||||||||| ||||    
T  15308120 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttaactta 15308176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 56 - 275
Target Start/End: Original strand, 111728 - 111948
Alignment:
Q  56 tcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcaga 155  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  111728 tcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcaga 111827  T
Q  156 atcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaa-ttttcagaaattatagattatgattatcgagagatagtctcac 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  111828 atcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatttttcagaaattatagattatgattattgagagatagtctcac 111927  T
Q  255 ccttaccttagttttgcagaa 275  Q
    |||||||||||||||||||||    
T  111928 ccttaccttagttttgcagaa 111948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 13 - 275
Target Start/End: Complemental strand, 1002 - 740
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    |||||||||||||||||||||||||||||||| ||||||| | ||||||| |||||||||||| |||||||| |||||||||||| || |||||||||||    
T  1002 catcatacacaaattcatcaattcatccaatcactcataaatttcaatcagtttatgatcacatcaacaaca-agattaagtttttatcctgaacattat 904  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaa 211  Q
    ||||||| || |||| |||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  903 attacaagagtattatcatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaaactatgcaattaggtcaa 804  T
Q  212 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 275  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  803 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 184; Significance: 1e-99; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 13 - 264
Target Start/End: Complemental strand, 19661703 - 19661454
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||| |||||||||||||||||||| |||||||     
T  19661703 catcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattac 19661605  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
    |||||||||||||||||||||| | |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19661604 attacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 19661506  T
Q  213 tttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19661505 tttcagaaattatagattatgattatcgagagaaagtctcacccttacctta 19661454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 13 - 264
Target Start/End: Original strand, 6483523 - 6483772
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    ||||||||| |  ||||||||||||||| |||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| |||||||     
T  6483523 catcatacaaatcttcatcaattcatcccatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattac 6483621  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
     ||||||||||||||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6483622 gttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaat 6483720  T
Q  213 tttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6483721 tttcagaaattatagattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 13 - 264
Target Start/End: Original strand, 6486990 - 6487239
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    ||||||||| |  ||||||||||||||| |||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| |||||||     
T  6486990 catcatacaaatcttcatcaattcatcccatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattac 6487088  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
     ||||||||||||||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6487089 gttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaat 6487187  T
Q  213 tttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6487188 tttcagaaattatagattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 68 - 275
Target Start/End: Original strand, 26583687 - 26583892
Alignment:
Q  68 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 167  Q
    ||||||||||||||  |||||||| |  |||||||||||||| |  |||||||| | |||||||||| ||||||| |||||| ||||||||||||||||     
T  26583687 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattaccc-tttcccctcagaatcatcatcaag 26583785  T
Q  168 ccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtt 267  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26583786 ccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcagaaattatagattatgattattgagagatagtctcacccttaccttagtt 26583884  T
Q  268 ttgcagaa 275  Q
    ||||||||    
T  26583885 ttgcagaa 26583892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 13 - 262
Target Start/End: Complemental strand, 23089305 - 23089057
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    ||||||||| || |||||||||||||||||||  | ||| || ||||||||||||||||||||||||||  |||||||||| |||||||| |||| | |     
T  23089305 catcatacagaacttcatcaattcatccaatcaattatattt-tcaatcaatttatgatcacagcaacagtatagattaagatttcattccgaacgtcac 23089207  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaa 211  Q
    ||||||||| |||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||| |||||| | |||   || |||||||||||||    
T  23089206 attacaacataattaacatgatcattacccattcccctt-agaatcatcatcaaaccctaaccctcaattttatcct-caaggttaagcaattaggtcaa 23089109  T
Q  212 ttttcagaaattatagattat-gattatcgagagatagtctcacccttacct 262  Q
    ||||| ||||||| | |||||  ||||  |||||||||||||||||||||||    
T  23089108 ttttccgaaattaaatattatctattaatgagagatagtctcacccttacct 23089057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 13 - 262
Target Start/End: Original strand, 23878813 - 23879060
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    ||||||||| || |||||||||||||||||||  |  || || |||||||||||||||||||| |||||  |||||||||| ||||||||||||||| |     
T  23878813 catcatacaaaacttcatcaattcatccaatcaattctattt-tcaatcaatttatgatcacaacaacagtatagattaagatttcattctgaacatcac 23878911  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaa 211  Q
    ||||||||| |||||||||||| |||||||  ||||| |||||||||||| | |||||||||||||||||| ||| | |||   || |||||||||||||    
T  23878912 attacaacataattaacatgatcattaccccattcccctcagaatcatcaac-aaccctaaccctcaatttaatcct-caaggttaagcaattaggtcaa 23879009  T
Q  212 ttttcagaaattatagattatgattatcgagagatagtctcacccttacct 262  Q
    ||||  ||||||||| || || ||||  |||||||||||||||||||||||    
T  23879010 tttttcgaaattatatataattattaatgagagatagtctcacccttacct 23879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 13 - 264
Target Start/End: Complemental strand, 23101713 - 23101463
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    ||||||||| || ||||| |||||||||||||  | ||| || |||||||||||||||||||| |||||  |||||||||| |||||||| |||| | |     
T  23101713 catcatacagaacttcatgaattcatccaatcaattatattt-tcaatcaatttatgatcacaacaacagtatagattaagatttcattccgaacgtcac 23101615  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaa 211  Q
    ||||||||| |||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| |||||| | |||   ||  ||||||||||||    
T  23101614 attacaacataattaacatgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatcct-caaggttaaacaattaggtcaa 23101517  T
Q  212 ttttcagaaattatagattat-gattatcgagagatagtctcacccttacctta 264  Q
    ||||| ||||||| | |||||  ||||  |||||||||||||||||||||||||    
T  23101516 ttttccgaaattacatattatctattaatgagagatagtctcacccttacctta 23101463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 265
Target Start/End: Complemental strand, 5706274 - 5706023
Alignment:
Q  11 atcatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacat 109  Q
    |||||||| |||| |||||||||||||| ||||   ||| |||| |||||||||| ||| ||   ||||||||||| ||| ||| ||||||||| |||||    
T  5706274 atcatcatccacatattcatcaattcatacaattcatcaaaatt-tcaatcaattaatggattgtagcaacaacatggatcaagctttcattcttaacat 5706176  T
Q  110 tatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca-atttatcttccaaaactatgcaattaggt 208  Q
    || |||   | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||   ||| |||  | ||| |||||||| |||||||||    
T  5706175 taaattcagaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggt 5706079  T
Q  209 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    ||| |||||| ||||||||||||||||||  ||||||||||||||||||||||||||    
T  5706078 caa-tttcaggaattatagattatgattaatgagagatagtctcacccttaccttag 5706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 250 - 301
Target Start/End: Complemental strand, 6260186 - 6260135
Alignment:
Q  250 ctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6260186 ctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 6260135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 23265133 - 23265197
Alignment:
Q  200 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23265133 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 23280201 - 23280265
Alignment:
Q  200 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23280201 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 21908353 - 21908414
Alignment:
Q  203 ttaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    |||| ||||||||||||||||||| || |||||||| |||||||||||||||||||||||||    
T  21908353 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 301
Target Start/End: Complemental strand, 19665081 - 19665037
Alignment:
Q  257 ttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  19665081 ttaccttagttttgcagaatgattacacagcacaatcggttccta 19665037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 24661576 - 24661632
Alignment:
Q  208 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  24661576 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 24661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 10577 - 10632
Alignment:
Q  210 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  10577 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 10632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 275
Target Start/End: Complemental strand, 23168483 - 23168288
Alignment:
Q  84 atagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt 183  Q
    ||||||||||   |||| |||||||| | ||||||||| | | ||||||| | |||| | ||| | |||| ||||| ||||| |||||||  ||||||||    
T  23168483 atagattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctcaattt 23168384  T
Q  184 ----atcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 275  Q
        |||||| |||||||| | ||||| | |||||| ||||||||||| |||||||| |  || ||||| || ||||||||||||||  ||||||||    
T  23168383 ttttatcttc-aaaactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaa 23168288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 275
Target Start/End: Complemental strand, 23579740 - 23579545
Alignment:
Q  84 atagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt 183  Q
    ||||||||||   |||| |||||||| | ||||||||| | | ||||||| | |||| | ||| | |||| ||||| ||||| |||||||  ||||||||    
T  23579740 atagattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctcaattt 23579641  T
Q  184 ----atcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 275  Q
        |||||| |||||||| | ||||| | |||||| ||||||||||| |||||||| |  || ||||| || ||||||||||||||  ||||||||    
T  23579640 ttttatcttc-aaaactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaa 23579545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 25180984 - 25180929
Alignment:
Q  210 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  25180984 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 25180929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 274
Target Start/End: Original strand, 26885166 - 26885246
Alignment:
Q  193 aactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcaga 274  Q
    |||||| | ||||| | ||||||||||||||||| |||| |||||| || ||||| || ||||||||||||||  |||||||    
T  26885166 aactattccattagattaattttcagaaattatacatta-gattattgaaagataatcccacccttaccttagaattgcaga 26885246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 25 - 262
Target Start/End: Complemental strand, 14635 - 14398
Alignment:
Q  25 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaa 124  Q
    ||||||||||| ||||||||  ||||| || ||||||| |||||||||||||||||| |||||||||||||||||||| |||||| | ||||||||||||    
T  14635 attcatcaatttatccaatcaatcatattt-tcaatcagtttatgatcacagcaacagcatagattaagttttcattcggaacatcacattacaacagaa 14537  T
Q  125 ttaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaattttcagaaatt 223  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14536 ttaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaatt 14437  T
Q  224 atagattatgattatcgagagatagtctcacccttacct 262  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  14436 atagattatgattattgagagatagtctcacccttacct 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 179; Significance: 1e-96; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 13 - 262
Target Start/End: Complemental strand, 8727984 - 8727735
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||  ||||||||||||||||||||||||||||     
T  8727984 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattac 8727885  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaa 211  Q
    |||||||||||||||||||||| | |||||| | ||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  8727884 attacaacagaattaacatgatcaataccca-tacccctcagaatcatcgtcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaa 8727786  T
Q  212 ttttcagaaattatagattatgattatcgagagatagtctcacccttacct 262  Q
    ||||||||||||||||||||||||||| ||| |||| ||||||||||||||    
T  8727785 ttttcagaaattatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 13 - 275
Target Start/End: Original strand, 23866418 - 23866680
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataa-ttctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacatta 111  Q
    |||||||||||||||||||||||||||||||| ||||||| |||  ||||| |||| ||||| |||||||||| |||||||||||  |||||||||||||    
T  23866418 catcatacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcagagcaacaaca-agattaagtttatattctgaacatta 23866516  T
Q  112 tattacaac-agaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtca 210  Q
    ||||||||  |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23866517 tattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtca 23866616  T
Q  211 attttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 275  Q
    | |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23866617 a-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 23866680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 13 - 265
Target Start/End: Original strand, 44477428 - 44477678
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| |||||||     
T  44477428 catcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattac 44477526  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
     ||||||||||||||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44477527 gttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaat 44477625  T
Q  213 tttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44477626 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 44477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 13 - 265
Target Start/End: Original strand, 44492586 - 44492836
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| |||||||     
T  44492586 catcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattac 44492684  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
     ||||||||||||||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44492685 gttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaat 44492783  T
Q  213 tttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44492784 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 44492836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 13 - 301
Target Start/End: Complemental strand, 27941104 - 27940815
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||| | |||||  ||||||||| ||||||||||||||||||     
T  27941104 catcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcataacaacagtatagattaaattttcattctgaacattac 27941006  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat--ttatcttccaa-aactatgcaattaggtc 209  Q
    |||||||||||||||||||||| | |||||| ||||| |||||||||||||||||||||||  | ||||  |||| || ||| ||| || | | |    |    
T  27941005 attacaacagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaattcccaattcttatttttcaagaacaattctaatcaaac 27940907  T
Q  210 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    ||||||||||||| ||| ||||| || || ||  | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27940906 aattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 27940815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 56 - 275
Target Start/End: Original strand, 17054440 - 17054656
Alignment:
Q  56 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 154  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  17054440 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 17054536  T
Q  155 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 254  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||    
T  17054537 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcac 17054635  T
Q  255 ccttaccttagttttgcagaa 275  Q
    ||||||||| |||||||||||    
T  17054636 ccttaccttggttttgcagaa 17054656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 264
Target Start/End: Original strand, 18614217 - 18614327
Alignment:
Q  155 aatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctca 253  Q
    ||||| ||| |||||||||  |||||||| |||||| | ||| || ||||| | ||||||||||||||||||| || |||||||| ||||||||||||||    
T  18614217 aatcagcataaaaccctaattctcaattttatcttcaagaacaattcaattggatcaattttcagaaattatatatcatgattattgagagatagtctca 18614316  T
Q  254 cccttacctta 264  Q
    |||||||||||    
T  18614317 cccttacctta 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 209 - 301
Target Start/End: Complemental strand, 14056619 - 14056527
Alignment:
Q  209 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    |||||||||||| ||| | | ||| ||||| |||||||||||||||||||||||||| ||||||||| |||| |||| || ||||||||||||    
T  14056619 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgcagaaagattgcacaacaaaatcggttccta 14056527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 23482117 - 23482053
Alignment:
Q  200 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23482117 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 297
Target Start/End: Original strand, 25111976 - 25112064
Alignment:
Q  209 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggtt 297  Q
    |||||||||||| ||| | | ||| ||||| |||||||||||||||||||||||||| |||| |||| |||| |||| || ||||||||    
T  25111976 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgtagaaagattgcacaacaaaatcggtt 25112064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 30765925 - 30765873
Alignment:
Q  249 tctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    ||||||||||||||||||||||||||| ||| | |||||||||||||||||||    
T  30765925 tctcacccttaccttagttttgcagaaagataaaacagcacaatcggttccta 30765873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 39364919 - 39364975
Alignment:
Q  208 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    |||||||||||||||| || | ||| ||||| |||||||||||||||||||||||||    
T  39364919 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 39364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 264
Target Start/End: Complemental strand, 29643440 - 29643386
Alignment:
Q  210 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||||||||||| | ||||||||||| || ||||| ||||||||||||||||    
T  29643440 aattttcagaaattacatattatgattattgaaagataatctcacccttacctta 29643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 24320725 - 24320670
Alignment:
Q  210 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  24320725 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 24320670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 300
Target Start/End: Complemental strand, 21325791 - 21325730
Alignment:
Q  240 gagagatagtctcacccttaccttagttttgcagaatg-attacacagcacaatcggttcct 300  Q
    ||||| ||| |||||||||||||||| ||||||||| | ||| ||||||| |||||||||||    
T  21325791 gagagttagcctcacccttaccttagatttgcagaaagaattgcacagcaaaatcggttcct 21325730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 21321192 - 21321132
Alignment:
Q  241 agagatagtctcacccttaccttagttttgcagaatg-attacacagcacaatcggttcct 300  Q
    |||| ||||||| |||||||||||| ||||||||| | ||| ||||||| |||||||||||    
T  21321192 agagttagtctcgcccttaccttagatttgcagaaagaattgcacagcaaaatcggttcct 21321132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 21931696 - 21931752
Alignment:
Q  208 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||||||||| ||||| ||||| || || ||||| ||| |||||||||||||||    
T  21931696 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 21931752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 178; Significance: 5e-96; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 13 - 301
Target Start/End: Original strand, 11146 - 11433
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    ||||||||| || |||||||||||||||||||  | ||| || ||||||||||| ||||||||||||||  || ||||||| ||||||| ||||||| |     
T  11146 catcatacaaaacttcatcaattcatccaatcaattatattt-tcaatcaatttgtgatcacagcaacagtatggattaagatttcattttgaacatcac 11244  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatt-tatcttccaaaactatgcaattaggtcaa 211  Q
    |||||||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||    
T  11245 attacaacagaattaacatgatcattactcatt-ccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaa 11343  T
Q  212 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  11344 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaatcggttccta 11433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 173; Significance: 5e-93; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 13 - 264
Target Start/End: Complemental strand, 20437274 - 20437024
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  ||||||||||||||||||||||||||||     
T  20437274 catcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattac 20437176  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaa 211  Q
    ||||||||| |||||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20437175 attacaacataattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaa 20437077  T
Q  212 ttttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20437076 ttttcagaaattatagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 56 - 275
Target Start/End: Original strand, 41111884 - 41112100
Alignment:
Q  56 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 154  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||   |  |||| ||||  || ||||    
T  41111884 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacaccgtctttactcatt--ccatcag 41111980  T
Q  155 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 254  Q
    ||||||||||||||||||||  |||  |||| || ||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  41111981 aatcatcatcaaaccctaactttcatcttatttttcaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 41112079  T
Q  255 ccttaccttagttttgcagaa 275  Q
    |||||||||||||||||||||    
T  41112080 ccttaccttagttttgcagaa 41112100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 32651563 - 32651627
Alignment:
Q  200 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  32651563 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 19663572 - 19663517
Alignment:
Q  209 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  19663572 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 18712790 - 18712854
Alignment:
Q  200 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||| ||||||||||||||||||| | ||||||||| ||||||||||||||||| |||||||    
T  18712790 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 20805320 - 20805376
Alignment:
Q  208 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  20805320 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 20805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 11158093 - 11158148
Alignment:
Q  209 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    |||||||||||||||||| |||| ||| || ||||| |||||||||||||||||||    
T  11158093 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 11158148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 10811839 - 10811785
Alignment:
Q  208 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 262  Q
    |||||||||||||||| || | ||| ||||| |||||||||||||||||||||||    
T  10811839 tcaattttcagaaattctacactattattattgagagatagtctcacccttacct 10811785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 20851187 - 20851132
Alignment:
Q  210 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  20851187 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20851132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 20857814 - 20857759
Alignment:
Q  210 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  20857814 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20857759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 21706276 - 21706331
Alignment:
Q  210 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  21706276 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21706331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 21710818 - 21710873
Alignment:
Q  210 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  21710818 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21710873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 166; Significance: 7e-89; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 13 - 265
Target Start/End: Complemental strand, 10446 - 10195
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| |||||||     
T  10446 catcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattac 10348  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaa 211  Q
    |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  10347 attacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaa 10249  T
Q  212 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  10248 ttttcagaaattatagattatgattattgagagatagtcccacccttaccttag 10195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 166; Significance: 7e-89; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 13 - 265
Target Start/End: Complemental strand, 1776 - 1525
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| |||||||     
T  1776 catcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattac 1678  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaa 211  Q
    |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  1677 attacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaa 1579  T
Q  212 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  1578 ttttcagaaattatagattatgattattgagagatagtcccacccttaccttag 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 163; Significance: 5e-87; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 13 - 301
Target Start/End: Original strand, 17973 - 18261
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    ||||||||| | ||||||||||| ||||||||  ||  |||| |||||||||| ||||||||||||||||||||| |||||||||||||||| |||| |     
T  17973 catcatacaaatattcatcaatttatccaatcaatccaaatt-tcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcac 18071  T
Q  113 attacaa-cagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtca 210  Q
    ||||||| ||||||||||||||  |||||| ||||||| | ||||||||||| ||||| ||||||||||||||| |||| ||| ||| ||||||||||||    
T  18072 attacaaacagaattaacatgaccattacc-atttcccgttagaatcatcattaaaccttaaccctcaatttattttcctaaagctaagcaattaggtca 18170  T
Q  211 attttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18171 attttcaaaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacaacacaatcggttccta 18261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 161; Significance: 7e-86; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 13 - 275
Target Start/End: Complemental strand, 2148 - 1887
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    |||| ||||||||||||||||||||| ||||| ||||| | | |||||||| ||||||||||||||||||||  ||||||||||||||| |||||||||     
T  2148 catcgtacacaaattcatcaattcatacaatcactcatcaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattatgaacattaa 2049  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaa- 211  Q
    ||||||| ||||||||||| || ||||||||||  || ||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||     
T  2048 attacaagagaattaacataatcattacccatt--ccatcaaaatcatcatcaaaccctaaccctcaaattattttccaaaactatacaattaggtcaat 1951  T
Q  212 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 275  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  1950 ttttcagaaattatagattatgattattgagatatagtctcacccttaccttagttttgcagaa 1887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 13 - 275
Target Start/End: Complemental strand, 8825 - 8564
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    |||| ||||||||||||||||||||| ||||| || || | | |||||||| ||||||||||||||||||||  ||||||||||||||| |||||||||     
T  8825 catcgtacacaaattcatcaattcatacaatcacttatcaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattttgaacattaa 8726  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaa- 211  Q
    ||||||| ||||||||||| || ||||||||||  || ||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||     
T  8725 attacaagagaattaacataatcattacccatt--ccatcataatcatcatcaaaccctaaccctcaaattattttccaaaactatacaattaggtcaat 8628  T
Q  212 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 275  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  8627 ttttcagaaattatagattatgattattgagatatagtctcacccttaccttagttttgcagaa 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 151; Significance: 7e-80; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 25 - 275
Target Start/End: Original strand, 109 - 356
Alignment:
Q  25 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaa 124  Q
    ||||||||||| |||||| |  |||||||| |||| ||||||||||||||| ||| |||||||||||||| |||| ||||||||  ||| ||||| | ||    
T  109 attcatcaatttatccaaccaatcataatt-tcaaccaatttatgatcacatcaataacatagattaagtcttcaatctgaacaccataatacaagaaaa 207  T
Q  125 ttaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaatta 224  Q
    |||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  208 ttaacatgatcattacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcagaaatta 305  T
Q  225 tagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 275  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  306 tagattatggttattgagagatagtctcacccttaccttagttttgcagaa 356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 68 - 301
Target Start/End: Original strand, 30715 - 30949
Alignment:
Q  68 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 167  Q
    |||||||| |||||  |||||||| |  ||||||||| |||| |  |||||||| | ||||||||||  |||| |  ||||| ||| |||||||||||||    
T  30715 tgatcacatcaacattatagattaggaattcattctgcacatcactttacaacatatttaacatgatcgttacaccattcccctcaaaatcatcatcaaa 30814  T
Q  168 ccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagt 266  Q
    |||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30815 ccctaatcctcaattttaccttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagt 30914  T
Q  267 tttgcagaatgattacacagcacaatcggttccta 301  Q
    ||||||||| |||||||||||| ||||| ||||||    
T  30915 tttgcagaaggattacacagcaaaatcgattccta 30949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 13 - 262
Target Start/End: Complemental strand, 3544 - 3295
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    ||||||||| || |||||||||||||||||||  | ||| || ||||||||||| ||||||||||||||  |||||||||| ||||||||||||||| |     
T  3544 catcatacaaaacttcatcaattcatccaatcaattatattt-tcaatcaatttgtgatcacagcaacagtatagattaagatttcattctgaacatcac 3446  T
Q  113 attacaacagaattaacatgatt-attacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtca 210  Q
    ||||||||| ||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| ||||||  ||||   || ||||||||||||    
T  3445 attacaacaaaattaacatgattcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatc-cccaaggttaagcaattaggtca 3348  T
Q  211 attttcagaaattatagattat-gattatcgagagatagtctcacccttacct 262  Q
    |||||| ||||||| | |||||  ||||  |||||||||||||||||||||||    
T  3347 attttccgaaattacatattatctattaatgagagatagtctcacccttacct 3295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 13 - 262
Target Start/End: Complemental strand, 3872 - 3624
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattat 112  Q
    ||||||||| || |||||||||||||||||||  | ||| || |||||||||||||||||||| |||||  |||||||||| |||||||| |||||| |     
T  3872 catcatacaaaacttcatcaattcatccaatcaattatattt-tcaatcaatttatgatcacaacaacagtatagattaagatttcattccgaacatcac 3774  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaa 211  Q
    ||||||||| |||||||||||| |||||||| | ||| |||||||||||||||||||||||||||||| |||||| | |||   || |||||||||||||    
T  3773 attacaacataattaacatgatcattaccca-tccccctcagaatcatcatcaaaccctaaccctcaattttatcct-caaggttaagcaattaggtcaa 3676  T
Q  212 ttttcagaaattatagattat-gattatcgagagatagtctcacccttacct 262  Q
    ||||| ||||||| | |||||  ||||  |||||||||||||||||||||||    
T  3675 ttttccgaaattacatattatctattaatgagagatagtctcacccttacct 3624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 74 - 270
Target Start/End: Complemental strand, 1920 - 1727
Alignment:
Q  74 cagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaa 173  Q
    |||||||| ||| ||||||| ||||||||| ||||||| ||| | | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||    
T  1920 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaa 1823  T
Q  174 ccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttg 270  Q
    |  |||  |||| |||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1822 ctttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagttttg 1727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 74 - 270
Target Start/End: Complemental strand, 5943 - 5750
Alignment:
Q  74 cagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaa 173  Q
    |||||||| ||| ||||||| ||||||||| ||||||| ||| | | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||    
T  5943 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaa 5846  T
Q  174 ccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttg 270  Q
    |  |||  |||| |||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5845 ctttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagttttg 5750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 76; Significance: 4e-35; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 182 - 269
Target Start/End: Original strand, 904 - 991
Alignment:
Q  182 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 269  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  904 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 182 - 269
Target Start/End: Original strand, 8049 - 8136
Alignment:
Q  182 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 269  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  8049 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 8136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 806 - 901
Alignment:
Q  25 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaaca 121  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  806 attcatcaatttatccaatccctcataattc-caatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaaca 901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 7951 - 8046
Alignment:
Q  25 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaaca 121  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  7951 attcatcaatttatccaatccctcataattc-caatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaaca 8046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 105
Target Start/End: Original strand, 3466 - 3558
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctga 105  Q
    |||||||||||||||||||||||||||||||| | ||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3466 catcatacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctga 3558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 209 - 301
Target Start/End: Complemental strand, 40587 - 40495
Alignment:
Q  209 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| ||||||||| |||| ||||||| ||||||||||||    
T  40587 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaaagattgcacagcaaaatcggttccta 40495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 153 - 271
Target Start/End: Complemental strand, 45386 - 45268
Alignment:
Q  153 agaatcatcatcaaaccctaaccctca-atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtct 251  Q
    |||||||||||||||||||||   ||| |||  | ||| |||||||| |||||||||||| |||||| ||||||||||||||||||| ||||||||||||    
T  45386 agaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtct 45288  T
Q  252 cacccttaccttagttttgc 271  Q
    |||||||||||||| |||||    
T  45287 cacccttaccttagatttgc 45268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 209 - 298
Target Start/End: Original strand, 135473 - 135562
Alignment:
Q  209 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttc 298  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| ||| ||||| |||| ||||||| |||||||||    
T  135473 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagattttcagaaagattgcacagcaaaatcggttc 135562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 211 - 301
Target Start/End: Complemental strand, 22646 - 22556
Alignment:
Q  211 attttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    |||||||||||||||| | ||||||||| |||||||||||||||||||||||| | |||||||||  ||| ||||||| ||||||||||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttaccttggatttgcagaaatattgcacagcaaaatcggttccta 22556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 209 - 288
Target Start/End: Original strand, 17643 - 17723
Alignment:
Q  209 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag-ttttgcagaatgattacacagca 288  Q
    |||||||||||||||||| |||||| |||| |||||||||||||||||||||||||| |||||||||| |||| |||||||    
T  17643 caattttcagaaattatacattatggttattgagagatagtctcacccttaccttagattttgcagaaagattgcacagca 17723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 16811 - 16875
Alignment:
Q  200 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  16811 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 116887 - 116951
Alignment:
Q  200 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  116887 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 116951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 34331 - 34276
Alignment:
Q  209 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  34331 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 72 - 8
Alignment:
Q  200 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||| ||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  72 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 301
Target Start/End: Complemental strand, 2256 - 2212
Alignment:
Q  257 ttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  2256 ttaccttagttttgcagaatgattacacagcacaatcggttccta 2212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 13623 - 13687
Alignment:
Q  200 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||| ||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  13623 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 101992 - 101928
Alignment:
Q  200 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||| ||||||||||| ||||||| | ||||||||| |||||||||||||||||||||||||    
T  101992 caattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 275
Target Start/End: Original strand, 1453 - 1515
Alignment:
Q  213 tttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 275  Q
    |||||||||||||| |||| ||| || ||||| ||||||||||||||||||| ||||||||||    
T  1453 tttcagaaattatacattaagatcattgagagttagtctcacccttaccttaattttgcagaa 1515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 275
Target Start/End: Complemental strand, 23760 - 23559
Alignment:
Q  75 agcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaac 174  Q
    |||||||  ||||||||||   |||| |||||||| | ||||||||| | | ||||||||| ||||   ||| | |||| ||||| ||||| |||||||     
T  23760 agcaacattatagattaagaaatcatactgaacatcaaattacaacacattaaacatgattcttacatcttttctttcaaaatcagcatcacaccctaat 23661  T
Q  175 cctcaattta-tcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcag 273  Q
     ||||||||  ||||| | |||||| |  |||| | ||||||||||||||||| |||||||| ||  | ||||| || ||||||||||||||  ||||||    
T  23660 tctcaattttgtcttcaagaactattcttttagattaattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattgcag 23561  T
Q  274 aa 275  Q
    ||    
T  23560 aa 23559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 275
Target Start/End: Original strand, 680 - 780
Alignment:
Q  176 ctcaatttatcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcaga 274  Q
    |||||||||| ||| | |||||| |  |||||| |||||| ||||||||||| |||| ||| || || ||||| || |||||||||||||||||||||||    
T  680 ctcaatttattttcaagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagttttgcaga 779  T
Q  275 a 275  Q
    |    
T  780 a 780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 5941 - 5857
Alignment:
Q  181 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    ||||||||| | |||||| ||||||| | ||||||||||||||||| ||||| || || || ||||| || ||||||||||||||    
T  5941 tttatcttcaagaactattcaattagattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttag 5857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 264
Target Start/End: Original strand, 1321 - 1441
Alignment:
Q  145 ttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgaga 243  Q
    |||| |||| ||||| |||||||||||||  |||| ||| ||| || | ||| ||  |||||| |||||||||| |||||||| || ||||| || || |    
T  1321 ttcctttcaaaatcagcatcaaaccctaattctcagttttatcatcaagaacaatttaattagatcaattttcaaaaattatatatcatgatcattgaaa 1420  T
Q  244 gatagtctcacccttacctta 264  Q
    |||||||||||||||||||||    
T  1421 gatagtctcacccttacctta 1441  T

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Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 12296 - 12352
Alignment:
Q  208 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  12296 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 12352  T

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Target: scaffold0139 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 15052 - 14997
Alignment:
Q  209 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    |||||||||||||||||| |||| ||| || ||||| |||||||||||||||||||    
T  15052 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 14997  T

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Target: scaffold0790 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 243 - 276
Target Start/End: Original strand, 5487 - 5520
Alignment:
Q  243 agatagtctcacccttaccttagttttgcagaat 276  Q
    ||||||||||||||||||||||||||||||||||    
T  5487 agatagtctcacccttaccttagttttgcagaat 5520  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 274
Target Start/End: Complemental strand, 493099 - 493019
Alignment:
Q  193 aactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcaga 274  Q
    |||||| | ||||| | ||||||||||||||||| |||| |||||| || ||||| |||||||||||||||||  |||||||    
T  493099 aactattccattagattaattttcagaaattatacatta-gattattgaaagataatctcacccttaccttagaattgcaga 493019  T

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Target: scaffold0348 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 298
Target Start/End: Complemental strand, 14668 - 14620
Alignment:
Q  250 ctcacccttaccttagttttgcagaatgattacacagcacaatcggttc 298  Q
    |||||||||||||||| ||||||||| |||| ||||||| |||||||||    
T  14668 ctcacccttaccttagatttgcagaaagattgcacagcaaaatcggttc 14620  T

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Target: scaffold0348; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 9336 - 9391
Alignment:
Q  210 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  9336 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 9391  T

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Target: scaffold0096 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 39563 - 39503
Alignment:
Q  208 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttt 268  Q
    ||||||||| ||||||||| |||||||| || ||||| ||| |||||||||||||| ||||    
T  39563 tcaattttctgaaattatatattatgatcattgagagttagcctcacccttacctttgttt 39503  T

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Target: scaffold0034 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 262
Target Start/End: Original strand, 73149 - 73337
Alignment:
Q  75 agcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaac 174  Q
    |||||||  ||||||||||   |||| | |||||| | ||||||||| | | ||||||||| |||| |  || | |||| ||||| ||||| |||||||     
T  73149 agcaacattatagattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccgtttctttcaaaatcaacatcacaccctaat 73248  T
Q  175 cctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 262  Q
     |||||||| |||||| | | |||| | ||||| | |||||||| |||||||| |||||||| || || ||||| || |||||||||||    
T  73249 tctcaattttatcttcaagagctatcctattagattaattttcataaattatacattatgatcattgaaagataatcccacccttacct 73337  T

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Target: scaffold0127 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 10239 - 10294
Alignment:
Q  210 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||| | ||||||||||| |  ||||| |||||||||||||||||    
T  10239 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 10294  T

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Target: scaffold0023 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 135438 - 135493
Alignment:
Q  210 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||| ||||||| ||| || ||||| |||||| ||||||||||    
T  135438 aattttcagaaattatatattatgactattgaaagataatctcacgcttaccttag 135493  T

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Target: scaffold1318 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 264
Target Start/End: Complemental strand, 1967 - 1913
Alignment:
Q  210 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||||||||||||| ||||||| ||| || ||||| || |||||||||||||    
T  1967 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 1913  T

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Target: scaffold0453 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 10634 - 10550
Alignment:
Q  181 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 265  Q
    ||||||||| | |||||| | ||||| | ||||||||||||||||| |||| ||| || || ||||| || ||| ||||||||||    
T  10634 tttatcttcaagaactattctattagattaattttcagaaattatacattaagatcattgaaagataatcccacacttaccttag 10550  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 2684 - 2628
Alignment:
Q  208 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 264  Q
    ||||||||||||| ||||| ||||| || || ||||| ||| |||||||||||||||    
T  2684 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 2628  T

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