View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1655-Insertion-6 (Length: 716)

Name: NF1655-Insertion-6
Description: NF1655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1655-Insertion-6
NF1655-Insertion-6
[»] chr7 (43 HSPs)
chr7 (8-304)||(28105139-28105435)
chr7 (412-716)||(28105511-28105818)
chr7 (412-478)||(24389137-24389203)
chr7 (412-478)||(42019607-42019673)
chr7 (412-473)||(45010961-45011022)
chr7 (412-479)||(6253791-6253858)
chr7 (412-471)||(17102348-17102407)
chr7 (412-478)||(10936146-10936212)
chr7 (412-478)||(17886842-17886908)
chr7 (412-478)||(27396639-27396705)
chr7 (412-478)||(27992060-27992126)
chr7 (412-478)||(40380036-40380102)
chr7 (412-478)||(43123185-43123251)
chr7 (412-478)||(47945367-47945433)
chr7 (412-478)||(47950797-47950863)
chr7 (412-478)||(48788813-48788879)
chr7 (412-473)||(5457264-5457325)
chr7 (412-473)||(37657194-37657255)
chr7 (412-473)||(40379779-40379840)
chr7 (412-471)||(10935804-10935863)
chr7 (412-471)||(27396954-27397013)
chr7 (412-478)||(28469020-28469086)
chr7 (412-478)||(32298787-32298853)
chr7 (412-473)||(2640188-2640249)
chr7 (412-473)||(42362460-42362521)
chr7 (412-471)||(6253481-6253540)
chr7 (412-471)||(17102030-17102089)
chr7 (423-478)||(17885649-17885704)
chr7 (412-471)||(20426689-20426748)
chr7 (412-459)||(28469379-28469426)
chr7 (412-471)||(37656862-37656921)
chr7 (412-471)||(42731429-42731488)
chr7 (412-478)||(13386099-13386165)
chr7 (412-473)||(18670220-18670281)
chr7 (412-469)||(23181355-23181412)
chr7 (412-469)||(24388829-24388886)
chr7 (412-459)||(6571023-6571070)
chr7 (412-471)||(32299064-32299123)
chr7 (412-479)||(34799509-34799576)
chr7 (412-473)||(22871634-22871695)
chr7 (412-449)||(29141557-29141594)
chr7 (412-449)||(42019978-42020015)
chr7 (412-449)||(42731800-42731837)
[»] chr2 (34 HSPs)
chr2 (412-478)||(6588693-6588759)
chr2 (412-478)||(39498631-39498697)
chr2 (412-478)||(16099376-16099442)
chr2 (413-478)||(13692572-13692637)
chr2 (412-478)||(37895357-37895423)
chr2 (412-478)||(44044124-44044190)
chr2 (413-473)||(15848445-15848505)
chr2 (412-471)||(15848098-15848157)
chr2 (412-471)||(25231207-25231266)
chr2 (412-471)||(45556122-45556181)
chr2 (412-478)||(6658199-6658265)
chr2 (412-478)||(25230112-25230178)
chr2 (412-470)||(36382487-36382545)
chr2 (412-478)||(36480070-36480136)
chr2 (412-478)||(36755440-36755506)
chr2 (412-478)||(39423867-39423933)
chr2 (412-478)||(44045354-44045420)
chr2 (412-478)||(44713805-44713871)
chr2 (412-471)||(10712733-10712792)
chr2 (412-471)||(11163382-11163441)
chr2 (412-471)||(36382171-36382230)
chr2 (412-462)||(2318878-2318928)
chr2 (412-462)||(3555260-3555310)
chr2 (412-478)||(34448147-34448213)
chr2 (412-469)||(36479727-36479785)
chr2 (412-469)||(6657888-6657945)
chr2 (412-473)||(10713080-10713141)
chr2 (412-473)||(30729631-30729692)
chr2 (412-471)||(16099065-16099124)
chr2 (416-459)||(44714132-44714175)
chr2 (412-478)||(11163064-11163130)
chr2 (421-459)||(14900821-14900859)
chr2 (412-478)||(21370554-21370620)
chr2 (412-478)||(45556399-45556465)
[»] chr1 (62 HSPs)
chr1 (412-478)||(49723078-49723144)
chr1 (412-473)||(13914078-13914139)
chr1 (412-473)||(24009585-24009646)
chr1 (412-478)||(36694292-36694358)
chr1 (412-478)||(36710393-36710459)
chr1 (412-478)||(37578202-37578268)
chr1 (412-478)||(47999133-47999199)
chr1 (412-473)||(42533034-42533095)
chr1 (412-478)||(5735063-5735129)
chr1 (412-478)||(6367914-6367980)
chr1 (412-478)||(17661862-17661927)
chr1 (412-478)||(30711679-30711745)
chr1 (412-478)||(43759174-43759240)
chr1 (412-478)||(46899071-46899137)
chr1 (412-469)||(34464459-34464516)
chr1 (412-473)||(34850422-34850483)
chr1 (412-473)||(35152687-35152748)
chr1 (412-471)||(6367572-6367631)
chr1 (412-471)||(23209686-23209745)
chr1 (412-478)||(183231-183297)
chr1 (412-478)||(19323244-19323310)
chr1 (412-478)||(26024744-26024810)
chr1 (412-478)||(48779471-48779537)
chr1 (412-473)||(13300261-13300322)
chr1 (412-449)||(24009922-24009959)
chr1 (412-469)||(34464810-34464867)
chr1 (412-473)||(34849021-34849082)
chr1 (412-473)||(40435355-40435416)
chr1 (412-473)||(40772816-40772877)
chr1 (414-478)||(1103813-1103877)
chr1 (412-471)||(13914426-13914485)
chr1 (414-473)||(14879315-14879374)
chr1 (412-471)||(19017988-19018047)
chr1 (412-471)||(35473641-35473700)
chr1 (412-471)||(40772517-40772576)
chr1 (412-471)||(46163040-46163099)
chr1 (412-478)||(1841810-1841876)
chr1 (412-478)||(19322902-19322968)
chr1 (417-471)||(32917275-32917329)
chr1 (412-478)||(40210380-40210446)
chr1 (412-478)||(41099085-41099151)
chr1 (412-473)||(4960550-4960611)
chr1 (412-473)||(5734020-5734080)
chr1 (412-469)||(14878981-14879038)
chr1 (412-473)||(17692542-17692603)
chr1 (412-449)||(19515829-19515866)
chr1 (412-477)||(31197075-31197140)
chr1 (412-472)||(7820964-7821024)
chr1 (414-449)||(6518177-6518212)
chr1 (412-459)||(25647894-25647941)
chr1 (412-471)||(41098743-41098802)
chr1 (412-478)||(32917612-32917678)
chr1 (412-454)||(35152353-35152395)
chr1 (412-478)||(46899952-46900018)
chr1 (412-449)||(17662231-17662268)
chr1 (412-473)||(17691229-17691290)
chr1 (412-449)||(19017639-19017676)
chr1 (412-449)||(23209372-23209408)
chr1 (412-449)||(30711337-30711374)
chr1 (412-449)||(37578573-37578610)
chr1 (412-449)||(42248483-42248520)
chr1 (412-469)||(47999453-47999510)
[»] chr3 (39 HSPs)
chr3 (412-473)||(35712054-35712115)
chr3 (414-473)||(40033531-40033590)
chr3 (412-471)||(40758157-40758216)
chr3 (412-478)||(23457989-23458055)
chr3 (412-478)||(40758462-40758528)
chr3 (412-473)||(41558239-41558300)
chr3 (412-478)||(3850479-3850545)
chr3 (412-478)||(33689392-33689457)
chr3 (416-478)||(36417702-36417764)
chr3 (412-478)||(36418040-36418106)
chr3 (412-478)||(43384635-43384701)
chr3 (412-478)||(53757075-53757141)
chr3 (412-449)||(9292253-9292290)
chr3 (412-473)||(9368658-9368719)
chr3 (412-468)||(51994248-51994304)
chr3 (412-471)||(9294317-9294376)
chr3 (412-471)||(33689738-33689797)
chr3 (412-459)||(42342801-42342848)
chr3 (412-479)||(53856408-53856475)
chr3 (412-478)||(19740933-19740999)
chr3 (412-454)||(36150537-36150579)
chr3 (412-469)||(19741253-19741310)
chr3 (412-473)||(23458336-23458397)
chr3 (412-473)||(26463642-26463703)
chr3 (412-449)||(26463967-26464004)
chr3 (412-449)||(40033837-40033874)
chr3 (412-473)||(41558018-41558079)
chr3 (412-469)||(42343092-42343149)
chr3 (412-468)||(2796459-2796515)
chr3 (422-478)||(42855657-42855713)
chr3 (412-472)||(51993974-51994034)
chr3 (412-471)||(2796189-2796248)
chr3 (412-459)||(34142589-34142636)
chr3 (412-478)||(46475133-46475198)
chr3 (417-478)||(3849046-3849107)
chr3 (416-469)||(13948794-13948847)
chr3 (412-441)||(41989575-41989604)
chr3 (412-449)||(46474825-46474862)
chr3 (412-449)||(53756754-53756791)
[»] chr8 (42 HSPs)
chr8 (412-478)||(1425063-1425129)
chr8 (412-478)||(33357508-33357574)
chr8 (412-478)||(40317974-40318040)
chr8 (414-478)||(13186411-13186475)
chr8 (413-473)||(31608870-31608930)
chr8 (415-478)||(8316666-8316729)
chr8 (412-471)||(13186070-13186129)
chr8 (412-478)||(20385578-20385644)
chr8 (412-478)||(20386782-20386848)
chr8 (412-478)||(38862915-38862981)
chr8 (412-478)||(38956024-38956090)
chr8 (412-473)||(30459381-30459442)
chr8 (415-478)||(23663558-23663621)
chr8 (412-471)||(39071686-39071745)
chr8 (412-471)||(40318323-40318382)
chr8 (412-478)||(7295279-7295345)
chr8 (412-478)||(12272928-12272994)
chr8 (412-478)||(34177322-34177388)
chr8 (412-478)||(34685610-34685675)
chr8 (412-469)||(22915719-22915776)
chr8 (412-473)||(31608537-31608597)
chr8 (412-472)||(5960056-5960116)
chr8 (412-471)||(8316947-8317006)
chr8 (412-478)||(4994667-4994733)
chr8 (412-478)||(12198960-12199026)
chr8 (412-478)||(12443388-12443454)
chr8 (412-478)||(22915399-22915465)
chr8 (412-478)||(36928828-36928894)
chr8 (412-461)||(4406029-4406078)
chr8 (412-449)||(16388593-16388630)
chr8 (412-473)||(34060499-34060560)
chr8 (412-473)||(34061685-34061746)
chr8 (412-471)||(4995016-4995074)
chr8 (412-479)||(7313356-7313423)
chr8 (416-459)||(10749879-10749922)
chr8 (412-459)||(12273224-12273271)
chr8 (412-459)||(16388897-16388944)
chr8 (412-471)||(23663873-23663932)
chr8 (412-471)||(23698603-23698662)
chr8 (412-471)||(38955713-38955772)
chr8 (412-478)||(36186111-36186177)
chr8 (412-462)||(39072009-39072059)
[»] chr6 (28 HSPs)
chr6 (412-478)||(3059608-3059674)
chr6 (412-478)||(12080988-12081054)
chr6 (412-478)||(30726111-30726177)
chr6 (412-478)||(33647303-33647369)
chr6 (412-473)||(8090284-8090345)
chr6 (412-473)||(33517891-33517952)
chr6 (412-478)||(11434812-11434878)
chr6 (412-478)||(21627723-21627789)
chr6 (412-471)||(33517544-33517603)
chr6 (412-478)||(681080-681146)
chr6 (412-478)||(20651020-20651086)
chr6 (412-478)||(30804213-30804279)
chr6 (412-473)||(12407518-12407579)
chr6 (412-471)||(3059267-3059326)
chr6 (412-471)||(21628072-21628131)
chr6 (412-471)||(30337459-30337518)
chr6 (412-478)||(679876-679942)
chr6 (412-478)||(11393156-11393222)
chr6 (412-478)||(13379834-13379900)
chr6 (412-454)||(15115349-15115391)
chr6 (412-478)||(15116584-15116650)
chr6 (412-478)||(30337770-30337836)
chr6 (412-449)||(12080646-12080683)
chr6 (412-473)||(12408528-12408589)
chr6 (412-471)||(26463189-26463248)
chr6 (412-478)||(17734206-17734272)
chr6 (412-478)||(20651999-20652065)
chr6 (412-449)||(22617893-22617930)
[»] chr5 (60 HSPs)
chr5 (412-478)||(14194433-14194499)
chr5 (412-478)||(19892318-19892384)
chr5 (412-471)||(6150464-6150523)
chr5 (412-478)||(5024029-5024095)
chr5 (412-462)||(6150788-6150838)
chr5 (412-478)||(11047789-11047854)
chr5 (412-478)||(11740697-11740763)
chr5 (412-478)||(11762069-11762135)
chr5 (412-478)||(16083295-16083361)
chr5 (412-478)||(17202751-17202817)
chr5 (412-478)||(19517959-19518025)
chr5 (412-478)||(27587467-27587533)
chr5 (412-478)||(28770879-28770945)
chr5 (412-478)||(35512466-35512532)
chr5 (412-478)||(42265745-42265811)
chr5 (412-468)||(18247096-18247152)
chr5 (412-472)||(43159172-43159232)
chr5 (415-478)||(5994241-5994304)
chr5 (412-478)||(3528883-3528949)
chr5 (412-478)||(8322756-8322822)
chr5 (412-478)||(16156865-16156931)
chr5 (412-478)||(18247428-18247494)
chr5 (412-478)||(28269432-28269498)
chr5 (412-478)||(29646372-29646438)
chr5 (412-478)||(32242594-32242659)
chr5 (412-478)||(39453651-39453717)
chr5 (412-468)||(5993899-5993955)
chr5 (415-459)||(38475370-38475414)
chr5 (412-471)||(5024377-5024436)
chr5 (412-471)||(11761759-11761818)
chr5 (412-471)||(20814494-20814553)
chr5 (412-471)||(27587158-27587217)
chr5 (412-471)||(35512158-35512217)
chr5 (412-471)||(39453310-39453369)
chr5 (412-478)||(186771-186837)
chr5 (412-454)||(16157231-16157273)
chr5 (412-478)||(21257513-21257579)
chr5 (412-478)||(38442419-38442485)
chr5 (412-469)||(13362589-13362646)
chr5 (412-469)||(18670212-18670269)
chr5 (412-449)||(20840543-20840580)
chr5 (412-469)||(28771199-28771256)
chr5 (412-449)||(32242252-32242289)
chr5 (428-473)||(35920254-35920299)
chr5 (417-478)||(37991214-37991275)
chr5 (414-478)||(13963181-13963245)
chr5 (412-459)||(3529213-3529260)
chr5 (412-478)||(6301895-6301959)
chr5 (412-471)||(24547484-24547543)
chr5 (412-471)||(35920543-35920602)
chr5 (412-478)||(20814146-20814211)
chr5 (420-478)||(24547195-24547253)
chr5 (412-478)||(38475043-38475109)
chr5 (412-473)||(5256369-5256429)
chr5 (412-473)||(5835783-5835844)
chr5 (414-459)||(13962876-13962921)
chr5 (414-471)||(17202411-17202468)
chr5 (412-449)||(19892689-19892726)
chr5 (412-449)||(20840818-20840855)
chr5 (412-449)||(27937380-27937417)
[»] chr4 (58 HSPs)
chr4 (412-478)||(10781836-10781902)
chr4 (412-478)||(11108192-11108258)
chr4 (412-478)||(51692871-51692937)
chr4 (412-471)||(46661273-46661332)
chr4 (412-478)||(1179152-1179218)
chr4 (412-478)||(10780723-10780789)
chr4 (412-478)||(10974332-10974398)
chr4 (412-478)||(18831669-18831735)
chr4 (412-478)||(24349684-24349750)
chr4 (412-478)||(35028008-35028074)
chr4 (412-478)||(52909605-52909671)
chr4 (412-472)||(54086705-54086765)
chr4 (412-471)||(5368957-5369016)
chr4 (412-478)||(147329-147395)
chr4 (412-478)||(7452155-7452221)
chr4 (412-478)||(13058334-13058400)
chr4 (414-468)||(14802097-14802151)
chr4 (412-478)||(15507683-15507749)
chr4 (412-478)||(24350784-24350850)
chr4 (412-478)||(24411700-24411766)
chr4 (412-478)||(36008854-36008920)
chr4 (412-478)||(37248557-37248623)
chr4 (412-478)||(43155539-43155605)
chr4 (412-469)||(23613319-23613376)
chr4 (412-473)||(23613635-23613696)
chr4 (412-472)||(44967079-44967139)
chr4 (412-471)||(15508032-15508090)
chr4 (412-471)||(24711121-24711180)
chr4 (412-471)||(34765739-34765798)
chr4 (412-478)||(148107-148173)
chr4 (412-458)||(24711452-24711498)
chr4 (412-478)||(34765390-34765456)
chr4 (412-478)||(49879217-49879283)
chr4 (412-478)||(50418678-50418744)
chr4 (412-478)||(55867466-55867532)
chr4 (412-473)||(1178067-1178127)
chr4 (412-469)||(17356283-17356340)
chr4 (412-473)||(35028355-35028416)
chr4 (412-472)||(16006151-16006211)
chr4 (262-298)||(35232532-35232568)
chr4 (412-472)||(53129516-53129576)
chr4 (412-459)||(7451844-7451891)
chr4 (412-471)||(13058047-13058106)
chr4 (412-471)||(14801746-14801805)
chr4 (412-471)||(18831359-18831418)
chr4 (412-471)||(37248246-37248305)
chr4 (412-459)||(39539289-39539336)
chr4 (412-471)||(44967397-44967456)
chr4 (412-471)||(50418996-50419055)
chr4 (412-471)||(51692563-51692622)
chr4 (416-471)||(52573585-52573640)
chr4 (414-449)||(53701824-53701859)
chr4 (412-478)||(17355935-17356001)
chr4 (421-459)||(27934551-27934589)
chr4 (412-478)||(37976163-37976229)
chr4 (412-462)||(48528495-48528545)
chr4 (412-473)||(55866121-55866180)
chr4 (412-449)||(53129887-53129924)
[»] scaffold0707 (1 HSPs)
scaffold0707 (412-473)||(6436-6497)
[»] scaffold0031 (2 HSPs)
scaffold0031 (412-471)||(68975-69034)
scaffold0031 (412-478)||(69317-69383)
[»] scaffold0020 (2 HSPs)
scaffold0020 (412-478)||(139993-140059)
scaffold0020 (412-471)||(139682-139741)
[»] scaffold0005 (2 HSPs)
scaffold0005 (414-468)||(37576-37630)
scaffold0005 (412-471)||(37922-37981)
[»] scaffold0075 (2 HSPs)
scaffold0075 (412-478)||(14439-14505)
scaffold0075 (415-449)||(14771-14805)
[»] scaffold0775 (1 HSPs)
scaffold0775 (412-478)||(4972-5038)
[»] scaffold0007 (2 HSPs)
scaffold0007 (412-454)||(2117-2159)
scaffold0007 (412-469)||(1779-1836)
[»] scaffold1130 (1 HSPs)
scaffold1130 (265-302)||(290-327)
[»] scaffold0771 (1 HSPs)
scaffold0771 (416-469)||(934-987)
[»] scaffold0295 (1 HSPs)
scaffold0295 (412-449)||(2510-2547)
[»] scaffold0128 (1 HSPs)
scaffold0128 (412-473)||(19867-19928)


Alignment Details
Target: chr7 (Bit Score: 285; Significance: 1e-159; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 8 - 304
Target Start/End: Original strand, 28105139 - 28105435
Alignment:
Q  8 atctctcgtattactcactttcgagttactcatcaaagtcatggaaaaagaatgaatcaatgttaactgaaagaaatgtatacggctaacatataaatta 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28105139 atctctcgtattactcactttcgagttactcatcaaagtcatggaaaaagaatgaatcaatattaactgaaagaaatgtatacggctaacatataaatta 28105238  T
Q  108 ctatcattcatggatttgatttcagcagcttttactagctgtcattggttatggatagaaagtgtcaagagctcaataggacgtgtgggattgaagcaag 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28105239 ctatcattcatggatttgatttcagcagcttttactagctgtcattggttatggatagaaagtgtcaagagctcaataggacgtgtgggattgaagcaag 28105338  T
Q  208 aaacaacaaataatgacgtgagatcatgtttggtgtataagaaaaatattaattatttaaataataattcctccgttcctttttaagtgtcttttag 304  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28105339 aaacaacaaataatgatgtgagatcatgtttggtgtataagaaaaatattaattatttaaataataattcctccgttcctttttaaatgtcttttag 28105435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 412 - 716
Target Start/End: Original strand, 28105511 - 28105818
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaacagtgaatagctcagtcaagcccggccttgggga 511  Q
    ||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28105511 tgtatttcatccttgcaattaagggtcgtttaaaaatttgtccctgtattcactaatccttgaaaacagtgaatagatcagtcaagcccggccttgggga 28105610  T
Q  512 agtttaaacagctcaatcaagcccggcctcaaaaatgcacgggcctnnnnnnnnntatagcctaattccaacaccccactcaaatnnnnnnnnnnnnnca 611  Q
    ||| |||||||||||||||||||||||||| |||||||||||||||         ||||||||||||||||||||||||||||||             ||    
T  28105611 agtgtaaacagctcaatcaagcccggcctctaaaatgcacgggcct-aaaaaaaatatagcctaattccaacaccccactcaaat--aaaataaaaaaca 28105707  T
Q  612 catgttccttcnnnnnnnnnnnncaatgcgtatttgagtttcttcttctcactcaacacatctt------ttaataattgctatttcgtttcatgtttaa 705  Q
    |||||||||||            |||||||||||||||||||||||||||||||||||||||||      |||||| |||||||||||||||||||||||    
T  28105708 catgttccttctttttcttttttcaatgcgtatttgagtttcttcttctcactcaacacatcttttttgcttaatatttgctatttcgtttcatgtttaa 28105807  T
Q  706 gagtgtttctg 716  Q
     ||| ||||||    
T  28105808 aagtttttctg 28105818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 24389203 - 24389137
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||| ||||    
T  24389203 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaac 24389137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 42019607 - 42019673
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||||||||||||| || ||||||||||||| |||||||||||| |||||||||| ||||    
T  42019607 tgtatttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatccttgcaaac 42019673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 412 - 473
Target Start/End: Complemental strand, 45011022 - 45010961
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||||||||||||||||||||| ||||||||||||| || ||||||||| ||||||||||    
T  45011022 tgtatttcatccttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatccttg 45010961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 412 - 479
Target Start/End: Complemental strand, 6253858 - 6253791
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaaca 479  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| ||||||| |||||||||| |||||    
T  6253858 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtattcgctaatccttgcaaaca 6253791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 17102407 - 17102348
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||| |||||||||||||||| ||||||||||||| |||||||||||| ||||||||    
T  17102407 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcct 17102348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 10936212 - 10936146
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| | ||||||||||| |||| ||||||| |||||||||| ||||    
T  10936212 tgtatttcatccttgcaattaggggttgtttaaaaattggtccttgtattcgctaatccttgcaaac 10936146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 17886908 - 17886842
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||||||||||||||||||| ||||||||||  |||||||||||  ||||||||| ||||    
T  17886908 tgtatttcatccttgcaattagggatcatttaaaaattgatccatgtattcgttaatccttgcaaac 17886842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 27396639 - 27396705
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||||||| ||||||||  |||||||||||| |||||||||||| |||||||||| ||||    
T  27396639 tgtatttcatccttgtaattaggggccgtttaaaaattggtccatgtattcgctaatccttgcaaac 27396705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 27992126 - 27992060
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| ||||||| |||||||||| ||||    
T  27992126 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaac 27992060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 40380102 - 40380036
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||||| | |||||||| ||||    
T  40380102 tgtatttcatccttgcaattaggagtcgtttaaaaattggtccatgtattcgccaatccttgcaaac 40380036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 43123185 - 43123251
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||| ||| ||||||||||| ||||||||||||| |||| |||||||||||||||||| ||||    
T  43123185 tgtatttcgtccctgcaattaggggtcgtttaaaaattggtccctgtattcactaatccttgcaaac 43123251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 47945367 - 47945433
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||| |||||||| ||||||||||||||||| || ||||||||| |||||||||| ||||    
T  47945367 tgtatttcatcgttgcaattggggatcgtttaaaaattggttcatgtattcgctaatccttgcaaac 47945433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 47950797 - 47950863
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||| |||||||| ||||||||||||||||| || ||||||||| |||||||||| ||||    
T  47950797 tgtatttcatcgttgcaattggggatcgtttaaaaattggttcatgtattcgctaatccttgcaaac 47950863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 48788813 - 48788879
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||| ||||||||||||| ||||||||||||| |||| ||||||| |||||||||| ||||    
T  48788813 tgtatttcattcttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaac 48788879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 412 - 473
Target Start/End: Complemental strand, 5457325 - 5457264
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||||||||||||||||||||| ||||||||||||| |||| |||||||  |||||||||    
T  5457325 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtattcgttaatccttg 5457264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 412 - 473
Target Start/End: Complemental strand, 37657255 - 37657194
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    ||||||||||||||||||||||||||||||||||||||  ||| |||||||  |||||||||    
T  37657255 tgtatttcatccttgcaattagggatcgtttaaaaattgatccctgtattcgttaatccttg 37657194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 412 - 473
Target Start/End: Original strand, 40379779 - 40379840
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||||||||||||||||||||| ||||||||||||| |||  ||||||| ||||||||||    
T  40379779 tgtatttcatccttgcaattaggggtcgtttaaaaattggtctttgtattcgctaatccttg 40379840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 10935804 - 10935863
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    |||||||||||||||||||||||| ||||||||||||| |||| |||| || ||||||||    
T  10935804 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 10935863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 27397013 - 27396954
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    |||||||||||||||||||||||| ||||||||||||| |||| |||| || ||||||||    
T  27397013 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 27396954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 28469020 - 28469086
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| ||||||||||||| |||| | ||||| |||||| ||| ||||    
T  28469020 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccttatattcgctaatctttgcaaac 28469086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 32298787 - 32298853
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||| ||||||||||| | |||| ||||||| |||||||||| ||||    
T  32298787 tgtatttgatccttgcaattaggggtcgtttaaaaactggtccctgtattcgctaatccttgcaaac 32298853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 412 - 473
Target Start/End: Original strand, 2640188 - 2640249
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||||||||||| ||||||||| ||||||||||||| || | ||||||| ||||||||||    
T  2640188 tgtatttcatccttacaattaggggtcgtttaaaaattggtacctgtattcgctaatccttg 2640249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 412 - 473
Target Start/End: Original strand, 42362460 - 42362521
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||||||||||||||||||||  ||||||||||||| |||| |||||||  |||||||||    
T  42362460 tgtatttcatccttgcaattaggtgtcgtttaaaaattggtccttgtattcgttaatccttg 42362521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 6253481 - 6253540
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| |||| || ||||||||    
T  6253481 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 6253540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 17102030 - 17102089
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| |||| || ||||||||    
T  17102030 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 17102089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 478
Target Start/End: Original strand, 17885649 - 17885704
Alignment:
Q  423 cttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||||| ||||||||||||| |||| ||||||| |||||||||| ||||    
T  17885649 cttgcaattaggggtcgtttaaaaattggtccctgtattctctaatccttgcaaac 17885704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 20426748 - 20426689
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    |||||||||||| ||||||||| | ||||||||||||| |||| ||||||| ||||||||    
T  20426748 tgtatttcatccctgcaattagaggtcgtttaaaaattggtccctgtattcgctaatcct 20426689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 459
Target Start/End: Complemental strand, 28469426 - 28469379
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgta 459  Q
    |||||||||||||||||||||||| ||||||||||||| |||| ||||    
T  28469426 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgta 28469379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 37656862 - 37656921
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||||||||||||||||||| |||||||||||||| |||  |||| || ||||||||    
T  37656862 tgtatttcatccttgcaattaggaatcgtttaaaaattggtctctgtaatcgctaatcct 37656921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 42731429 - 42731488
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||| |||||||||||||||||| ||||||||||||| |||| |||| || ||||||||    
T  42731429 tgtatctcatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcct 42731488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 13386165 - 13386099
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| || ||||||||||||| ||||||||||||| |||| | ||||| |||||||||| ||||    
T  13386165 tgtatttaatacttgcaattaggggtcgtttaaaaattggtccctatattcgctaatccttgcaaac 13386099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 473
Target Start/End: Complemental strand, 18670281 - 18670220
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    ||||||| |||||||||||||||| ||||||||||| | |||| |||||||  |||||||||    
T  18670281 tgtatttaatccttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttg 18670220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 469
Target Start/End: Complemental strand, 23181412 - 23181355
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatc 469  Q
    ||||||||||| |||||||||||| ||||||||| ||| ||||||||| || ||||||    
T  23181412 tgtatttcatcattgcaattaggggtcgtttaaatattggtccatgtaatcgctaatc 23181355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 469
Target Start/End: Original strand, 24388829 - 24388886
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatc 469  Q
    ||||||||||||||||||||| || ||||||||||||| |||  ||||||| ||||||    
T  24388829 tgtatttcatccttgcaattatgggtcgtttaaaaattggtctctgtattcgctaatc 24388886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 459
Target Start/End: Original strand, 6571023 - 6571070
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgta 459  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| ||||    
T  6571023 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgta 6571070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 32299123 - 32299064
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||| |||||||||||||||  ||||||||||||| |||| |||| || ||||||||    
T  32299123 tgtatttgatccttgcaattaggagtcgtttaaaaattggtccctgtaatcgctaatcct 32299064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 479
Target Start/End: Complemental strand, 34799576 - 34799509
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaaca 479  Q
    ||||||| |||| ||||| ||||| ||||||||||||| |||| || | ||||||||||||| |||||    
T  34799576 tgtatttgatccctgcaaataggggtcgtttaaaaattggtccttgcaatcactaatccttgcaaaca 34799509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 473
Target Start/End: Complemental strand, 22871695 - 22871634
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    ||||||| |||||||||||||||| || |||||||||| |||| |||| |  ||||||||||    
T  22871695 tgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatagctaatccttg 22871634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 449
Target Start/End: Complemental strand, 29141594 - 29141557
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatt 449  Q
    |||||||||||||||||||||| | |||||||||||||    
T  29141594 tgtatttcatccttgcaattagaggtcgtttaaaaatt 29141557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 449
Target Start/End: Complemental strand, 42020015 - 42019978
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatt 449  Q
    |||||||||||||||||||||||| | |||||||||||    
T  42020015 tgtatttcatccttgcaattaggggttgtttaaaaatt 42019978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 449
Target Start/End: Complemental strand, 42731837 - 42731800
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatt 449  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  42731837 tgtatttcatccttgtaattaggggtcgtttaaaaatt 42731800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 8e-20; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 6588693 - 6588759
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||| ||||    
T  6588693 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaac 6588759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 39498697 - 39498631
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||    
T  39498697 tgtatttgatccttgcaattagggatcgtttaaaaattggtccatgtattcgctaatccttgcaaac 39498631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 16099442 - 16099376
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| |||||||||||||||||| ||||    
T  16099442 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcactaatccttgcaaac 16099376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 413 - 478
Target Start/End: Complemental strand, 13692637 - 13692572
Alignment:
Q  413 gtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||| ||||    
T  13692637 gtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaac 13692572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 37895357 - 37895423
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||||||||||||| || ||||||||||||| |||| ||||||| |||||||||| ||||    
T  37895357 tgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaac 37895423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 44044124 - 44044190
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||| ||||||||||| | ||||||||||| |||| |||||||||||||||||||||||    
T  44044124 tgtatttgatccctgcaattaggggtggtttaaaaattggtccctgtattcactaatccttgaaaac 44044190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 413 - 473
Target Start/End: Complemental strand, 15848505 - 15848445
Alignment:
Q  413 gtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    ||||||||||||||||||||||| ||||||||||||| ||  |||||||| ||||||||||    
T  15848505 gtatttcatccttgcaattaggggtcgtttaaaaattggtttatgtattcgctaatccttg 15848445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 15848098 - 15848157
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    |||||||||||||||||||||||| ||||||||||||| |||| |||| || ||||||||    
T  15848098 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 15848157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 25231266 - 25231207
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||| |||| ||||||||||| ||||||||||||| |||||||||||| ||||||||    
T  25231266 tgtatttaatccctgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcct 25231207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 45556122 - 45556181
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||| |||||||||||||||||||||||||||||| |||| |||| || ||||||||    
T  45556122 tgtatttgatccttgcaattagggatcgtttaaaaattggtccctgtaatcgctaatcct 45556181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 6658265 - 6658199
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||| | ||||||||||||| |||| ||||||| |||||||||| ||||    
T  6658265 tgtatttgatccttgcaattagaggtcgtttaaaaattggtccctgtattcgctaatccttgcaaac 6658199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 25230112 - 25230178
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||| ||||||||||| ||||||||||||| |||| ||||||| |||||||||| ||||    
T  25230112 tgtatttaatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaac 25230178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 470
Target Start/End: Complemental strand, 36382545 - 36382487
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcc 470  Q
    ||||||||||||||||||||| || ||||||||||||| |||| ||||||| |||||||    
T  36382545 tgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatcc 36382487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 36480136 - 36480070
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||||||||||||| || ||||||||||||| |||| | ||||| |||||||||| ||||    
T  36480136 tgtatttcatccttgcaattaagggtcgtttaaaaattggtccctatattcgctaatccttgcaaac 36480070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 36755506 - 36755440
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| ||||||||||||| |||| | || || |||||||||| ||||    
T  36755506 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaaac 36755440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 39423933 - 39423867
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| |||||||||||||  ||| | ||||| |||||||||| ||||    
T  39423933 tgtatttcatccttgcaattaggggtcgtttaaaaattgatccctatattcgctaatccttgcaaac 39423867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 44045420 - 44045354
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||| ||||||||||| ||||||||||||| |||| ||||||| |||||||||| ||||    
T  44045420 tgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaac 44045354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 44713805 - 44713871
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||||||| ||||| || ||||||||||||| ||| |||||||| |||||||||| ||||    
T  44713805 tgtatttcatccttgtaattaagggtcgtttaaaaattggtcaatgtattcgctaatccttgcaaac 44713871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 10712733 - 10712792
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    |||||||||||||||||||||||| ||||||||||||| |||| | || ||| |||||||    
T  10712733 tgtatttcatccttgcaattagggttcgtttaaaaattggtccttataatcattaatcct 10712792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 11163441 - 11163382
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| |||| || ||||||||    
T  11163441 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 11163382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 36382171 - 36382230
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    |||||||||||||||||||||||| ||||||||||||| |||| | || || ||||||||    
T  36382171 tgtatttcatccttgcaattagggttcgtttaaaaattggtccctataatcgctaatcct 36382230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 462
Target Start/End: Complemental strand, 2318928 - 2318878
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattc 462  Q
    |||||||||||||| ||||||||| ||||||||||||| || |||||||||    
T  2318928 tgtatttcatccttccaattaggggtcgtttaaaaattggttcatgtattc 2318878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 462
Target Start/End: Original strand, 3555260 - 3555310
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattc 462  Q
    |||||||||||||||||||||||| ||||||||||||| |||  |||||||    
T  3555260 tgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattc 3555310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 34448213 - 34448147
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| | ||||||||||| |||| | |||||  ||||||||| ||||    
T  34448213 tgtatttcatccttgcaattaggggttgtttaaaaattggtccctatattcgttaatccttgcaaac 34448147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 469
Target Start/End: Original strand, 36479727 - 36479785
Alignment:
Q  412 tgtatttcatcctt-gcaattagggatcgtttaaaaatttgtccatgtattcactaatc 469  Q
    |||||||||||||| |||||||||| ||||||||||||| ||||||||| || ||||||    
T  36479727 tgtatttcatcctttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatc 36479785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 469
Target Start/End: Original strand, 6657888 - 6657945
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatc 469  Q
    ||||||| |||||||||||| ||| ||||||||||||| |||| |||| |||||||||    
T  6657888 tgtatttgatccttgcaatttggggtcgtttaaaaattggtccctgtaatcactaatc 6657945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 473
Target Start/End: Complemental strand, 10713141 - 10713080
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    ||||||||||||||||||||| || ||||||||||||| ||   ||||||| ||||||||||    
T  10713141 tgtatttcatccttgcaattaagggtcgtttaaaaattggtttctgtattcgctaatccttg 10713080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 473
Target Start/End: Original strand, 30729631 - 30729692
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    ||||||||||||||||||||||   ||||||||||||| |||| | ||||| ||||||||||    
T  30729631 tgtatttcatccttgcaattagacgtcgtttaaaaattggtccctatattcgctaatccttg 30729692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 16099065 - 16099124
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||| || ||||||||||||| || |||||||||| |||| |||| |||||||||||    
T  16099065 tgtatttgattcttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcct 16099124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 416 - 459
Target Start/End: Complemental strand, 44714175 - 44714132
Alignment:
Q  416 tttcatccttgcaattagggatcgtttaaaaatttgtccatgta 459  Q
    |||||||||||||||||||| ||||||||||||| |||| ||||    
T  44714175 tttcatccttgcaattaggggtcgtttaaaaattagtccctgta 44714132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 11163064 - 11163130
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| ||| |||||||||  | ||||||||||||| |||| ||||||| |||||||||| ||||    
T  11163064 tgtatttgatctttgcaattaaaggtcgtttaaaaattggtccctgtattcgctaatccttgcaaac 11163130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 421 - 459
Target Start/End: Complemental strand, 14900859 - 14900821
Alignment:
Q  421 tccttgcaattagggatcgtttaaaaatttgtccatgta 459  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  14900859 tccttgcaattaggggtcgtttaaaaatttgtccctgta 14900821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 21370620 - 21370554
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||||||| |||||  | |||||||||||||  |||||||||||  ||||||||| ||||    
T  21370620 tgtatttcatccttgtaattataggtcgtttaaaaattgatccatgtattcgttaatccttgcaaac 21370554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 45556465 - 45556399
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| ||||||| |||||||| ||||||||||||| |||  ||||||| |||||| ||| ||||    
T  45556465 tgtatttgatccttgtaattaggggtcgtttaaaaattggtcgctgtattcgctaatctttgcaaac 45556399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 8e-20; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 49723144 - 49723078
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||| ||||    
T  49723144 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaac 49723078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 412 - 473
Target Start/End: Original strand, 13914078 - 13914139
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||    
T  13914078 tgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgtattcgctaatccttg 13914139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 412 - 473
Target Start/End: Original strand, 24009585 - 24009646
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||    
T  24009585 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtattcactaatccttg 24009646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 36694292 - 36694358
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| ||||||||||||| ||| |||||||| |||||||||| ||||    
T  36694292 tgtatttcatccttgcaattaggggtcgtttaaaaattggtctatgtattcgctaatccttgcaaac 36694358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 36710393 - 36710459
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| ||||||||||||| ||| |||||||| |||||||||| ||||    
T  36710393 tgtatttcatccttgcaattaggggtcgtttaaaaattggtctatgtattcgctaatccttgcaaac 36710459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 37578202 - 37578268
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||| ||||    
T  37578202 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaac 37578268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 47999133 - 47999199
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||||||||||||||||| |||| ||||||| |||||||||| ||||    
T  47999133 tgtatttgatccttgcaattagggatcgtttaaaaattggtccctgtattcgctaatccttgcaaac 47999199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 412 - 473
Target Start/End: Original strand, 42533034 - 42533095
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||  |||||||||    
T  42533034 tgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgtattcgttaatccttg 42533095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 5735129 - 5735063
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||| |||||||||| |||||||||||||| || ||||||||| |||||||||| ||||    
T  5735129 tgtatttcatccctgcaattaggaatcgtttaaaaattggttcatgtattcgctaatccttgcaaac 5735063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 6367980 - 6367914
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||||||||||||| || ||||||||||||| |||| ||||||| |||||||||| ||||    
T  6367980 tgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaac 6367914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 17661862 - 17661927
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||| ||||    
T  17661862 tgtatttcatccttgcaattaggggtcgtttaaaaattggtcc-tgtattcgctaatccttgcaaac 17661927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 30711745 - 30711679
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| ||||||||||||| |||  ||||||| |||||||||| ||||    
T  30711745 tgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaac 30711679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 43759240 - 43759174
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| ||||||||||||  |||| ||||||| |||||||||| ||||    
T  43759240 tgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgtattcgctaatccttgcaaac 43759174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 46899071 - 46899137
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||||||||| ||||| |||| ||||    
T  46899071 tgtatttcatccatgcaattaggggtcgtttaaaaattggtccatgtattcgctaattcttgcaaac 46899137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 412 - 469
Target Start/End: Original strand, 34464459 - 34464516
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatc 469  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||| || ||||||    
T  34464459 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatc 34464516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 412 - 473
Target Start/End: Complemental strand, 34850483 - 34850422
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||    
T  34850483 tgtatttaatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttg 34850422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 412 - 473
Target Start/End: Complemental strand, 35152748 - 35152687
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||||||||||||||||||||| ||||||||||||| |||  ||||||| ||||||||||    
T  35152748 tgtatttcatccttgcaattaggggtcgtttaaaaattagtctctgtattcgctaatccttg 35152687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 6367572 - 6367631
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    |||||||||||||||||||||||| ||||||||||||| |||| |||| || ||||||||    
T  6367572 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 6367631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 23209745 - 23209686
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    |||||||||||||||||||||||| ||||||||||||| |||| |||| || ||||||||    
T  23209745 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcct 23209686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 183231 - 183297
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||| ||||||||| ||||||||||||| |||| ||||||| |||||||||| ||||    
T  183231 tgtatttgatccttacaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaac 183297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 19323310 - 19323244
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||| |||| ||||| |||||||||||||||| || ||||||||| |||||||||| ||||    
T  19323310 tgtatttcattcttgtaattatggatcgtttaaaaattcgttcatgtattcgctaatccttgcaaac 19323244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 26024810 - 26024744
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| |||| || |||||||||| ||||    
T  26024810 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaac 26024744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 48779537 - 48779471
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||  ||| ||||||||| |||||||||||  |||||||||| ||||    
T  48779537 tgtatttcatccttgcaattaggagtcgcttaaaaattagtccatgtatttgctaatccttgcaaac 48779471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 412 - 473
Target Start/End: Complemental strand, 13300322 - 13300261
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    ||||||||||| |||||||||||  ||||||||||||| |||  ||||||||||||||||||    
T  13300322 tgtatttcatcattgcaattaggcgtcgtttaaaaattggtctctgtattcactaatccttg 13300261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 412 - 449
Target Start/End: Complemental strand, 24009959 - 24009922
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatt 449  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24009959 tgtatttcatccttgcaattagggatcgtttaaaaatt 24009922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 412 - 469
Target Start/End: Complemental strand, 34464867 - 34464810
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatc 469  Q
    |||||||||||||||||||||||| | ||||||||||| ||||||||| || ||||||    
T  34464867 tgtatttcatccttgcaattaggggttgtttaaaaattggtccatgtaatcgctaatc 34464810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 412 - 473
Target Start/End: Original strand, 34849021 - 34849082
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    ||||||| |||||||||||||||| || |||||||||| |||| ||||||| ||||||||||    
T  34849021 tgtatttaatccttgcaattaggggtcttttaaaaattggtccctgtattcgctaatccttg 34849082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 412 - 473
Target Start/End: Original strand, 40435355 - 40435416
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||||||||||||||||||||| ||||||||||||| |||  |||||||  |||||||||    
T  40435355 tgtatttcatccttgcaattaggggtcgtttaaaaattggtcattgtattcgttaatccttg 40435416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 412 - 473
Target Start/End: Complemental strand, 40772877 - 40772816
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||||||||||||||||||||| |||||| |||||  |||| ||||||| ||||||||||    
T  40772877 tgtatttcatccttgcaattaggggtcgtttgaaaatcggtccctgtattcgctaatccttg 40772816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 414 - 478
Target Start/End: Complemental strand, 1103877 - 1103813
Alignment:
Q  414 tatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||  | ||||||||||||| |||| ||||||| |||||||||| ||||    
T  1103877 tatttcatccttgcaattaaaggtcgtttaaaaattggtccctgtattcgctaatccttgcaaac 1103813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 13914485 - 13914426
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    |||||||||||||||||||||| | | ||||||||||| ||||||||| || ||||||||    
T  13914485 tgtatttcatccttgcaattagaggttgtttaaaaattggtccatgtaatcgctaatcct 13914426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 414 - 473
Target Start/End: Complemental strand, 14879374 - 14879315
Alignment:
Q  414 tatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    ||||||||| |||||||||||||||||||||||||| |||  | ||||| ||||||||||    
T  14879374 tatttcatcattgcaattagggatcgtttaaaaattggtctctatattcgctaatccttg 14879315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 19018047 - 19017988
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||| |||||||||||||  | ||||||||||||| |||||||||||| ||||||||    
T  19018047 tgtattttatccttgcaattacaggtcgtttaaaaattggtccatgtattcgctaatcct 19017988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 35473641 - 35473700
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| |||| || ||||||||    
T  35473641 tgtatttaatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 35473700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 40772517 - 40772576
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||||||||||||||||| || ||||||||||||| |||| |||| || ||||||||    
T  40772517 tgtatttcatccttgcaattatgggtcgtttaaaaattggtccctgtaatcgctaatcct 40772576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 46163040 - 46163099
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||||||| ||| |||||||| ||||||||||||| ||||||||| || ||||||||    
T  46163040 tgtatttcatcattgtaattaggggtcgtttaaaaattggtccatgtaatcgctaatcct 46163099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 1841876 - 1841810
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||||||| ||| |||| |||||||||||||  ||| ||||||| |||||||||| ||||    
T  1841876 tgtatttcatccttgtaatgaggggtcgtttaaaaattgttccctgtattcgctaatccttgcaaac 1841810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 19322902 - 19322968
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||||||  ||||| || ||||||||||||| || ||||||||| |||||||||| ||||    
T  19322902 tgtatttcatccttataattacgggtcgtttaaaaattcgttcatgtattcgctaatccttgcaaac 19322968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 417 - 471
Target Start/End: Original strand, 32917275 - 32917329
Alignment:
Q  417 ttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    |||||||||||||||||| |||||||||||||| |||| |||| || ||||||||    
T  32917275 ttcatccttgcaattaggaatcgtttaaaaattggtccctgtaatcgctaatcct 32917329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 40210380 - 40210446
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||| | |||||||||| || |||  ||||||| |||||||||| ||||    
T  40210380 tgtatttcatccttgcaattagtggtcgtttaaaatttggtctttgtattcgctaatccttgcaaac 40210446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 41099151 - 41099085
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||| ||||||| | ||||||||||||| |||  ||||||| |||||||||| ||||    
T  41099151 tgtatttcatccttacaattagtggtcgtttaaaaattggtctctgtattcgctaatccttgcaaac 41099085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 473
Target Start/End: Original strand, 4960550 - 4960611
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    ||||||||||| |||||||||||| |||||||||||||  ||  ||||||| ||||||||||    
T  4960550 tgtatttcatcattgcaattaggggtcgtttaaaaattgctctttgtattcgctaatccttg 4960611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 473
Target Start/End: Original strand, 5734020 - 5734080
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||||| ||||||||||||||| ||||||||||||| || |||||| || ||||||||||    
T  5734020 tgtatttcgtccttgcaattaggggtcgtttaaaaattggt-catgtaatcgctaatccttg 5734080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 469
Target Start/End: Original strand, 14878981 - 14879038
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatc 469  Q
    ||||||| |||||||||||||||| ||||||||||||| || |||||| || ||||||    
T  14878981 tgtattttatccttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatc 14879038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 473
Target Start/End: Complemental strand, 17692603 - 17692542
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||||||||||||||||||||| ||||||||||||  |||| |||  || ||||||||||    
T  17692603 tgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgttatcgctaatccttg 17692542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 449
Target Start/End: Original strand, 19515829 - 19515866
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatt 449  Q
    |||||||||||||||||||||||| |||||||||||||    
T  19515829 tgtatttcatccttgcaattaggggtcgtttaaaaatt 19515866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 477
Target Start/End: Original strand, 31197075 - 31197140
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaa 477  Q
    |||||||||||| ||||||||||| || ||||||||||||||  |||||||  ||||||| |||||    
T  31197075 tgtatttcatccctgcaattaggggtcatttaaaaatttgtctctgtattcgttaatcctggaaaa 31197140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 412 - 472
Target Start/End: Original strand, 7820964 - 7821024
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcctt 472  Q
    |||||||||||||||||||||||| || ||||| |||| |||| |||| || |||||||||    
T  7820964 tgtatttcatccttgcaattaggggtcctttaataattagtccctgtaatcgctaatcctt 7821024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 414 - 449
Target Start/End: Complemental strand, 6518212 - 6518177
Alignment:
Q  414 tatttcatccttgcaattagggatcgtttaaaaatt 449  Q
    |||||||||||||||||||||| |||||||||||||    
T  6518212 tatttcatccttgcaattaggggtcgtttaaaaatt 6518177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 459
Target Start/End: Original strand, 25647894 - 25647941
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgta 459  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| ||||    
T  25647894 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgta 25647941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 41098743 - 41098802
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    |||||||||| ||||||||||||| ||||||||||||| |||  |||| || ||||||||    
T  41098743 tgtatttcattcttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcct 41098802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 32917678 - 32917612
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||| |||||||||| || ||||||||||||| |||  |||||||  ||||||||| ||||    
T  32917678 tgtatttcattcttgcaattaagggtcgtttaaaaattggtctctgtattcgttaatccttgcaaac 32917612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 454
Target Start/End: Original strand, 35152353 - 35152395
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtcc 454  Q
    |||||||||||||||||||||| | ||||||||||||| ||||    
T  35152353 tgtatttcatccttgcaattagaggtcgtttaaaaattggtcc 35152395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 46900018 - 46899952
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||| |||||||| || || |||||||||| ||| |||||||| ||||| |||| ||||    
T  46900018 tgtatttcatccatgcaattaagggtcatttaaaaattggtcaatgtattcgctaattcttgcaaac 46899952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 449
Target Start/End: Complemental strand, 17662268 - 17662231
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatt 449  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  17662268 tgtatttcatccttgcaatttggggtcgtttaaaaatt 17662231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 473
Target Start/End: Original strand, 17691229 - 17691290
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||||| ||||| ||| ||||| ||||||||||||| |||| |||| || ||||||||||    
T  17691229 tgtatttcgtccttacaagtaggggtcgtttaaaaattggtccctgtaatcgctaatccttg 17691290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 449
Target Start/End: Original strand, 19017639 - 19017676
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatt 449  Q
    |||||||||||||||||||||||| | |||||||||||    
T  19017639 tgtatttcatccttgcaattaggggttgtttaaaaatt 19017676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 449
Target Start/End: Original strand, 23209372 - 23209408
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatt 449  Q
    |||||||||||||||||||||||| |||||||||||||    
T  23209372 tgtatttcatccttgcaattaggg-tcgtttaaaaatt 23209408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 449
Target Start/End: Original strand, 30711337 - 30711374
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatt 449  Q
    |||||||||||||||||||||||| | |||||||||||    
T  30711337 tgtatttcatccttgcaattaggggttgtttaaaaatt 30711374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 449
Target Start/End: Complemental strand, 37578610 - 37578573
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatt 449  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  37578610 tgtatttcatccttgcaattgggggtcgtttaaaaatt 37578573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 449
Target Start/End: Original strand, 42248483 - 42248520
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatt 449  Q
    |||||||||||||||||||||| | |||||||||||||    
T  42248483 tgtatttcatccttgcaattagtggtcgtttaaaaatt 42248520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 469
Target Start/End: Complemental strand, 47999510 - 47999453
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatc 469  Q
    ||||||| ||||||| |||||||| ||||||||||||| |||| |||| || ||||||    
T  47999510 tgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatc 47999453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 3e-19; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 412 - 473
Target Start/End: Original strand, 35712054 - 35712115
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||    
T  35712054 tgtatttcatccttgcaattagggatcatttaaaaattggtccatgtattcgctaatccttg 35712115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 414 - 473
Target Start/End: Original strand, 40033531 - 40033590
Alignment:
Q  414 tatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    ||||||||||||||||||| ||||||||||||||||  ||||||||||| ||||||||||    
T  40033531 tatttcatccttgcaattaaggatcgtttaaaaattgatccatgtattcgctaatccttg 40033590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 40758157 - 40758216
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||| || ||||||||    
T  40758157 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcct 40758216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 23457989 - 23458055
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||||||||||||| || ||||||||||||| |||| ||||||| |||||||||| ||||    
T  23457989 tgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaac 23458055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 40758528 - 40758462
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| || |||||||||| ||| |||||||| |||||||||| ||||    
T  40758528 tgtatttcatccttgcaattaggggtcatttaaaaattggtctatgtattcgctaatccttgcaaac 40758462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 412 - 473
Target Start/End: Complemental strand, 41558300 - 41558239
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||||||||| ||||||||||| |||||||||||||  ||||||||||| ||||||||||    
T  41558300 tgtatttcatccctgcaattaggggtcgtttaaaaattaatccatgtattcgctaatccttg 41558239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 3850545 - 3850479
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||| ||||||||||| ||||||||||||| |||| |||||||  ||||||||| ||||    
T  3850545 tgtatttcatccctgcaattaggggtcgtttaaaaattggtccctgtattcgataatccttggaaac 3850479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 33689392 - 33689457
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| ||||||||||||| || ||||||||| ||||| |||| ||||    
T  33689392 tgtatttcatccttgcaattaggggtcgtttaaaaattggt-catgtattcgctaattcttgcaaac 33689457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 416 - 478
Target Start/End: Original strand, 36417702 - 36417764
Alignment:
Q  416 tttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||| |||||||| ||||||||||||| |||| ||||||| |||||||||| ||||    
T  36417702 tttcatccttgtaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaac 36417764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 36418106 - 36418040
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||||||| |||||||| ||||||||||||| || | ||||||| |||||||||| ||||    
T  36418106 tgtatttcatccttgtaattaggggtcgtttaaaaattggttcctgtattcgctaatccttgcaaac 36418040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 43384701 - 43384635
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||||||||||||||| ||||||||||||||||||  | |||||  ||||||||| ||||    
T  43384701 tgtatttcatccttgcaattaggaatcgtttaaaaatttgtctctatattcgttaatccttgcaaac 43384635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 53757141 - 53757075
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||| |||||||||||   ||||||||||||| |||||||||||| |||||||||| ||||    
T  53757141 tgtatttcattcttgcaattagaagtcgtttaaaaattggtccatgtattcgctaatccttgcaaac 53757075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 412 - 449
Target Start/End: Original strand, 9292253 - 9292290
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatt 449  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9292253 tgtatttcatccttgcaattagggatcgtttaaaaatt 9292290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 412 - 473
Target Start/End: Complemental strand, 9368719 - 9368658
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||||| ||||||||||||||| ||||||||||||| |||| |||| ||| |||||||||    
T  9368719 tgtatttcgtccttgcaattaggggtcgtttaaaaattggtccctgtaatcattaatccttg 9368658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 412 - 468
Target Start/End: Complemental strand, 51994304 - 51994248
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaat 468  Q
    ||||||| |||||||||||||||||||||||||||||| |||| |||| || |||||    
T  51994304 tgtatttgatccttgcaattagggatcgtttaaaaattggtccttgtaatcgctaat 51994248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 9294376 - 9294317
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    |||||||||||||||||||||||| ||||||||||||| |||| | || || ||||||||    
T  9294376 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatcct 9294317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 33689797 - 33689738
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||||||| |||||||||||| ||||||||||||| || |||||| || ||||||||    
T  33689797 tgtatttcatctttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcct 33689738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 459
Target Start/End: Original strand, 42342801 - 42342848
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgta 459  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||||||    
T  42342801 tgtatttcatccttacaattaggggtcgtttaaaaattggtccatgta 42342848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 479
Target Start/End: Complemental strand, 53856475 - 53856408
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaaca 479  Q
    ||||||| |||| ||||| ||||| ||| ||||||||| |||| |||||||||||||||||| |||||    
T  53856475 tgtatttgatccctgcaaataggggtcgcttaaaaattggtccttgtattcactaatccttgcaaaca 53856408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 19740933 - 19740999
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| || | ||||||||||||||||||||||||| |||| |||| || |||||||||| ||||    
T  19740933 tgtatttgattcatgcaattagggatcgtttaaaaattggtccctgtaatcgctaatccttgcaaac 19740999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 454
Target Start/End: Original strand, 36150537 - 36150579
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtcc 454  Q
    |||||||||||||||||||||||| ||||||||||||| ||||    
T  36150537 tgtatttcatccttgcaattaggggtcgtttaaaaattggtcc 36150579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 469
Target Start/End: Complemental strand, 19741310 - 19741253
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatc 469  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| |||| || ||||||    
T  19741310 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatc 19741253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 473
Target Start/End: Complemental strand, 23458397 - 23458336
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    ||||||||||||||||||||| || ||||||||||||| |||  |||| || ||||||||||    
T  23458397 tgtatttcatccttgcaattatgggtcgtttaaaaattggtctctgtaatcgctaatccttg 23458336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 473
Target Start/End: Original strand, 26463642 - 26463703
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    ||||||||||||||||||||| || |||||||||||||  ||| |||||||  |||||||||    
T  26463642 tgtatttcatccttgcaattaagggtcgtttaaaaattgatccttgtattcggtaatccttg 26463703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 449
Target Start/End: Complemental strand, 26464004 - 26463967
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatt 449  Q
    |||||||||||||||||||||| |||||||||||||||    
T  26464004 tgtatttcatccttgcaattagagatcgtttaaaaatt 26463967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 449
Target Start/End: Complemental strand, 40033874 - 40033837
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatt 449  Q
    |||||||||||||||||||||||| |||||||||||||    
T  40033874 tgtatttcatccttgcaattaggggtcgtttaaaaatt 40033837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 473
Target Start/End: Original strand, 41558018 - 41558079
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||||||| |||||||||| || ||||||||||||| || | ||||||| ||||||||||    
T  41558018 tgtatttcattcttgcaattatgggtcgtttaaaaattggtacttgtattcgctaatccttg 41558079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 469
Target Start/End: Complemental strand, 42343149 - 42343092
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatc 469  Q
    ||||||||||||||| ||||| || |||||||||||||  ||||||||||| ||||||    
T  42343149 tgtatttcatccttgtaattaagggtcgtttaaaaattgatccatgtattcgctaatc 42343092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 412 - 468
Target Start/End: Complemental strand, 2796515 - 2796459
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaat 468  Q
    |||| ||||||||||||||||||  | ||||||||||| |||||||||||| |||||    
T  2796515 tgtacttcatccttgcaattaggagttgtttaaaaattggtccatgtattcgctaat 2796459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 422 - 478
Target Start/End: Complemental strand, 42855713 - 42855657
Alignment:
Q  422 ccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||  || |||||||||| |||||||||||| |||||||||| ||||    
T  42855713 ccttgcaattaggcgtcatttaaaaattagtccatgtattcgctaatccttgcaaac 42855657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 412 - 472
Target Start/End: Original strand, 51993974 - 51994034
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcctt 472  Q
    ||||||| ||| |||||||||| | ||||||||||||| |||| ||||||| |||||||||    
T  51993974 tgtatttgatctttgcaattagaggtcgtttaaaaattggtccctgtattcgctaatcctt 51994034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 2796189 - 2796248
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||| |||||||||||||||| || |||||||||| |||| |||| || ||||||||    
T  2796189 tgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcct 2796248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 459
Target Start/End: Complemental strand, 34142636 - 34142589
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgta 459  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| ||||    
T  34142636 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgta 34142589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 46475198 - 46475133
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||| ||||||||| |||||||||||||  | | ||||||| |||||||||| ||||    
T  46475198 tgtatttcatccttacaattaggggtcgtttaaaaattgatac-tgtattcgctaatccttgcaaac 46475133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 417 - 478
Target Start/End: Original strand, 3849046 - 3849107
Alignment:
Q  417 ttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| ||||||||||  ||||||||||||| |||| |||||||  ||||||||| ||||    
T  3849046 ttcatccctgcaattaggagtcgtttaaaaattggtccctgtattcgttaatccttgcaaac 3849107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 416 - 469
Target Start/End: Original strand, 13948794 - 13948847
Alignment:
Q  416 tttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatc 469  Q
    |||| |||||||||||||| ||| |||||||||| ||||||||| || ||||||    
T  13948794 tttcgtccttgcaattaggcatcatttaaaaattagtccatgtaatcgctaatc 13948847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 441
Target Start/End: Complemental strand, 41989604 - 41989575
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtt 441  Q
    ||||||||||||||||||||||||||||||    
T  41989604 tgtatttcatccttgcaattagggatcgtt 41989575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 449
Target Start/End: Original strand, 46474825 - 46474862
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatt 449  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  46474825 tgtatttcatctttgcaattaggggtcgtttaaaaatt 46474862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 449
Target Start/End: Original strand, 53756754 - 53756791
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatt 449  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  53756754 tgtatttcatctttgcaattaggggtcgtttaaaaatt 53756791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 2e-17; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 1425063 - 1425129
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| |||||||||||||||||| ||||    
T  1425063 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcactaatccttgcaaac 1425129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 33357508 - 33357574
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||| |||||||||| ||||    
T  33357508 tgtatttcatccttgcaattaggggtcgtttaaaaattgatccatgtattcgctaatccttgcaaac 33357574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 40317974 - 40318040
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| |||||||||||||||||  ||||||| |||||||||| ||||    
T  40317974 tgtatttcatccttgcaattaggggtcgtttaaaaatttgtctctgtattcgctaatccttgcaaac 40318040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 414 - 478
Target Start/End: Complemental strand, 13186475 - 13186411
Alignment:
Q  414 tatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||| ||||    
T  13186475 tatttcatccttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatccttgcaaac 13186411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 413 - 473
Target Start/End: Complemental strand, 31608930 - 31608870
Alignment:
Q  413 gtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||||||||||||||||| || ||||||||||||| |||||||||||| ||||||||||    
T  31608930 gtatttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatccttg 31608870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 415 - 478
Target Start/End: Original strand, 8316666 - 8316729
Alignment:
Q  415 atttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||  ||||||||| ||||    
T  8316666 atttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatccttgcaaac 8316729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 13186070 - 13186129
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    |||||||||||||||||||||||||||||||||||||| || |||||| || ||||||||    
T  13186070 tgtatttcatccttgcaattagggatcgtttaaaaattggttcatgtaatcgctaatcct 13186129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 20385578 - 20385644
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| ||||||| |||||||||| ||||    
T  20385578 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaac 20385644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 20386848 - 20386782
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| ||||||| |||||||||| ||||    
T  20386848 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaac 20386782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 38862981 - 38862915
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| ||||||||||||| |||  ||||||| |||||||||| ||||    
T  38862981 tgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaac 38862915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 38956090 - 38956024
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| ||||||| |||||||||| ||||    
T  38956090 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgtaaac 38956024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 412 - 473
Target Start/End: Original strand, 30459381 - 30459442
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||||||||||| ||||||||  ||||||||||||| ||| |||||||||||||||||||    
T  30459381 tgtatttcatccttacaattaggcgtcgtttaaaaattagtctatgtattcactaatccttg 30459442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 415 - 478
Target Start/End: Original strand, 23663558 - 23663621
Alignment:
Q  415 atttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||||||||||||| ||||||||||||| |||| |||||||  ||||||||| ||||    
T  23663558 atttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgttaatccttggaaac 23663621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 39071686 - 39071745
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    |||||||||||||||||||||||| ||||||||||||| |||| |||| || ||||||||    
T  39071686 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 39071745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 40318382 - 40318323
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    |||||||||||||||||||||||| | ||||||||||| ||||||||| || ||||||||    
T  40318382 tgtatttcatccttgcaattaggggttgtttaaaaattagtccatgtaatcgctaatcct 40318323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 7295345 - 7295279
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| ||||||||||||| |||||||||||||||  |||| ||||||| |||||||||| ||||    
T  7295345 tgtattttatccttgcaattatggatcgtttaaaaatcggtccctgtattcgctaatccttgcaaac 7295279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 12272928 - 12272994
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||||||||||||||||| |||  |||| || |||||||||| ||||    
T  12272928 tgtatttgatccttgcaattagggatcgtttaaaaattggtctctgtaatcgctaatccttgcaaac 12272994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 34177388 - 34177322
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||| ||| |||||||| ||||||||||||| |||| ||||||| |||||||||| ||||    
T  34177388 tgtatttcatctttgtaattaggggtcgtttaaaaattggtccttgtattcgctaatccttgtaaac 34177322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 34685675 - 34685610
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||||||||||||||||| || | ||||||| |||||||||| ||||    
T  34685675 tgtattttatccttgcaattagggatcgtttaaaaattggt-cttgtattcgctaatccttgcaaac 34685610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 412 - 469
Target Start/End: Complemental strand, 22915776 - 22915719
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatc 469  Q
    ||||||| |||||||||| ||||||||||||||||||| ||||||||| || ||||||    
T  22915776 tgtatttgatccttgcaactagggatcgtttaaaaattggtccatgtaatcgctaatc 22915719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 412 - 473
Target Start/End: Original strand, 31608537 - 31608597
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    ||||||||||||||| |||||||||||||||||||| |||  ||||||||| ||||||||||    
T  31608537 tgtatttcatccttgtaattagggatcgtttaaaaa-ttgatcatgtattcgctaatccttg 31608597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 412 - 472
Target Start/End: Original strand, 5960056 - 5960116
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcctt 472  Q
    |||||||||||||||||||||||||||| |||||||||  ||| |||| || |||||||||    
T  5960056 tgtatttcatccttgcaattagggatcgattaaaaattgctccctgtaatcgctaatcctt 5960116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 8317006 - 8316947
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| |||| || ||||||||    
T  8317006 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcct 8316947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 4994667 - 4994733
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||| |||||||||||||| |||||||||||  ||  ||||||| |||||||||| ||||    
T  4994667 tgtatttcatcgttgcaattagggattgtttaaaaattgatctctgtattcgctaatccttggaaac 4994733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 12198960 - 12199026
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| | || || |||||||||| ||||    
T  12198960 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaaac 12199026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 12443388 - 12443454
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| | || || |||||||||| ||||    
T  12443388 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaaac 12443454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 22915399 - 22915465
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| || ||||||||||| |||| |||||||||| ||||||||| || |||||||||| ||||    
T  22915399 tgtatttgattcttgcaattagagatcatttaaaaattggtccatgtaatcgctaatccttgcaaac 22915465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 36928894 - 36928828
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||| ||||||||||  |||||||||||||| ||| |||||||  |||||||||| ||||    
T  36928894 tgtatttcatcgttgcaattagatatcgtttaaaaattggtctatgtatttgctaatccttgcaaac 36928828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 461
Target Start/End: Complemental strand, 4406078 - 4406029
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtatt 461  Q
    ||||||||||||||| |||||||| | ||||||||||| |||||||||||    
T  4406078 tgtatttcatccttgtaattaggggttgtttaaaaattggtccatgtatt 4406029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 449
Target Start/End: Original strand, 16388593 - 16388630
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatt 449  Q
    |||||||||||||||||||||||| |||||||||||||    
T  16388593 tgtatttcatccttgcaattaggggtcgtttaaaaatt 16388630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 473
Target Start/End: Original strand, 34060499 - 34060560
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||||||||||||||||||    ||||||||||||| ||||||||| || ||||||||||    
T  34060499 tgtatttcatccttgcaattaaacgtcgtttaaaaattggtccatgtaatcgctaatccttg 34060560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 473
Target Start/End: Complemental strand, 34061746 - 34061685
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||| |||||||||||||||   |||||||||||||  ||||||||||| ||||||||||    
T  34061746 tgtattgcatccttgcaattagacgtcgtttaaaaattgatccatgtattcgctaatccttg 34061685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 4995074 - 4995016
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    |||||||||||||||||||||||| || |||||||||| |||| |||| || ||||||||    
T  4995074 tgtatttcatccttgcaattaggggtcatttaaaaattggtcc-tgtaatcgctaatcct 4995016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 479
Target Start/End: Complemental strand, 7313423 - 7313356
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaaca 479  Q
    ||||||| |||| ||||| ||||| ||||||||||||| |||| || | ||||||||||||| |||||    
T  7313423 tgtatttgatccctgcaaataggggtcgtttaaaaattggtccttgcaatcactaatccttgcaaaca 7313356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 416 - 459
Target Start/End: Complemental strand, 10749922 - 10749879
Alignment:
Q  416 tttcatccttgcaattagggatcgtttaaaaatttgtccatgta 459  Q
    |||| |||||||||||||||||| |||||||||| |||||||||    
T  10749922 tttcgtccttgcaattagggatcatttaaaaattggtccatgta 10749879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 459
Target Start/End: Complemental strand, 12273271 - 12273224
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgta 459  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| ||||    
T  12273271 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgta 12273224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 459
Target Start/End: Complemental strand, 16388944 - 16388897
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgta 459  Q
    |||||||||||||||||||||||| || |||||||||| || ||||||    
T  16388944 tgtatttcatccttgcaattaggggtcatttaaaaattggttcatgta 16388897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 23663932 - 23663873
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||| |||||||||||||||| ||||||||||||| |||  |||| || ||||||||    
T  23663932 tgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcct 23663873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 23698662 - 23698603
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||| ||||||| |||||||| ||||||||||||| |||| |||| || ||||||||    
T  23698662 tgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 23698603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 38955713 - 38955772
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||| |||||||||||| ||||||||||||||||| |||  |||| || ||||||||    
T  38955713 tgtatttgatccttgcaattggggatcgtttaaaaattggtcattgtaatcgctaatcct 38955772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 36186111 - 36186177
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||| ||| |||||||| || ||||||| || |||| ||||||| |||||||||| ||||    
T  36186111 tgtatttcatctttgtaattaggggtcttttaaaatttggtccctgtattcgctaatccttgcaaac 36186177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 462
Target Start/End: Complemental strand, 39072059 - 39072009
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattc 462  Q
    ||||||||||||||||||| | || ||||||||||||| |||| |||||||    
T  39072059 tgtatttcatccttgcaatcaagggtcgtttaaaaattggtccctgtattc 39072009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 2e-17; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 3059674 - 3059608
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||| ||||    
T  3059674 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaac 3059608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 12081054 - 12080988
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||||||| |||||||||| ||||    
T  12081054 tgtatttcatccttgcaattaggagtcgtttaaaaatttgtccctgtattcgctaatccttgcaaac 12080988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 30726177 - 30726111
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||| ||||    
T  30726177 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaac 30726111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 33647369 - 33647303
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||| ||||    
T  33647369 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaac 33647303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 412 - 473
Target Start/End: Complemental strand, 8090345 - 8090284
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||| ||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||    
T  8090345 tgtattacatccttgcaattaggggtcgtttaaaaattggtccttgtattcactaatccttg 8090284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 412 - 473
Target Start/End: Complemental strand, 33517952 - 33517891
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||||||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||    
T  33517952 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttg 33517891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 11434812 - 11434878
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||||||||||||| || ||||||||||||| |||||||||||| |||||| ||| ||||    
T  11434812 tgtatttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatcgttgcaaac 11434878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 21627723 - 21627789
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||||||| ||||| ||||||||||||||||  ||||||||||| |||||||||| ||||    
T  21627723 tgtatttcatccttgtaattaaggatcgtttaaaaattgatccatgtattcgctaatccttgcaaac 21627789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 33517544 - 33517603
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||||||||||| |||||||||||||||||||||| |||| |||| || ||||||||    
T  33517544 tgtatttcatccttgtaattagggatcgtttaaaaattggtccctgtaatcgctaatcct 33517603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 681146 - 681080
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||| ||||||||||||| |||  ||||||| |||||||||| ||||    
T  681146 tgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaac 681080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 20651020 - 20651086
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||| ||||||||||||||||||||||||| || | ||||||| |||||||||| ||||    
T  20651020 tgtatttgatccctgcaattagggatcgtttaaaaattggttcctgtattcgctaatccttgcaaac 20651086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 30804279 - 30804213
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| |||||||||||||  ||| ||||||| ||||| |||| ||||    
T  30804279 tgtatttcatccttgcaattaggggtcgtttaaaaattgatccctgtattcgctaattcttgcaaac 30804213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 412 - 473
Target Start/End: Original strand, 12407518 - 12407579
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||||||||||| |||||| |||||||||||||||| |||  ||||||| ||||||||||    
T  12407518 tgtatttcatccttacaattaaggatcgtttaaaaattggtctctgtattcgctaatccttg 12407579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 3059267 - 3059326
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||||||||||||||||| || ||||||||||  ||||||||||| || ||||||||    
T  3059267 tgtatttcatccttgcaattaagggtcgtttaaaatattgtccatgtaatcgctaatcct 3059326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 21628131 - 21628072
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    |||||||||||||||||||||||| ||| ||||||||| |||| |||| || ||||||||    
T  21628131 tgtatttcatccttgcaattaggggtcgcttaaaaattggtccctgtaatcgctaatcct 21628072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 30337459 - 30337518
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| |||| || ||||||||    
T  30337459 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 30337518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 679876 - 679942
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| ||||||||||||| || ||||||||||||| |||  ||||||| |||||||||| ||||    
T  679876 tgtatttgatccttgcaattaagggtcgtttaaaaattggtctctgtattcgctaatccttgcaaac 679942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 11393222 - 11393156
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||| ||| |||||||| ||||||||||||| ||||  |||||| |||||||||| ||||    
T  11393222 tgtatttcatctttgtaattaggggtcgtttaaaaattggtccccgtattcgctaatccttgcaaac 11393156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 13379900 - 13379834
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||| ||||||||||| ||||||||||||| |||| ||||||| ||||| |||| ||||    
T  13379900 tgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaattcttgcaaac 13379834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 454
Target Start/End: Original strand, 15115349 - 15115391
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtcc 454  Q
    |||||||||||||||||||||| ||||||||||||||| ||||    
T  15115349 tgtatttcatccttgcaattagagatcgtttaaaaattggtcc 15115391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 15116650 - 15116584
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||  ||| || |||||||||| ||||    
T  15116650 tgtatttcgtccttgcaattaggggtcgtttaaaaattggtcctcgtaatcgctaatccttgcaaac 15116584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 30337836 - 30337770
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||| || |||||||||| |||| |||| || |||||||||| ||||    
T  30337836 tgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatccttgcaaac 30337770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 449
Target Start/End: Original strand, 12080646 - 12080683
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatt 449  Q
    |||||||||||||||||||||||| |||||||||||||    
T  12080646 tgtatttcatccttgcaattaggggtcgtttaaaaatt 12080683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 473
Target Start/End: Complemental strand, 12408589 - 12408528
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||||||||||| ||||||||| | |||||||| || |||| ||||||| ||||||||||    
T  12408589 tgtatttcatccttacaattaggggttgtttaaaagttggtccttgtattcgctaatccttg 12408528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 26463189 - 26463248
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||| |||| ||||||||||| ||||||||||||| |||| |||||||  |||||||    
T  26463189 tgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgttaatcct 26463248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 17734206 - 17734272
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||| ||||||||||||| || | |||| |  |||||||||| ||||    
T  17734206 tgtatttgatccttgcaattaggggtcgtttaaaaattggttcttgtaattgctaatccttgcaaac 17734272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 20652065 - 20651999
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| || | |||||||| || |||||||||||||  ||| |||||||||||||||||| ||||    
T  20652065 tgtatttaattcctgcaattatgggtcgtttaaaaattgatccctgtattcactaatccttgcaaac 20651999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 449
Target Start/End: Original strand, 22617893 - 22617930
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatt 449  Q
    |||||||||||||||||||||||  |||||||||||||    
T  22617893 tgtatttcatccttgcaattaggagtcgtttaaaaatt 22617930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 2e-17; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 14194433 - 14194499
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||| ||||    
T  14194433 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaac 14194499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 19892318 - 19892384
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||  ||||||||| ||||    
T  19892318 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatccttgcaaac 19892384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 6150464 - 6150523
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    |||||||||||||||||||||||| ||||||||||||| || |||||| |||||||||||    
T  6150464 tgtatttcatccttgcaattaggggtcgtttaaaaattggttcatgtaatcactaatcct 6150523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 5024029 - 5024095
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| |||||||||||||  | ||||||||| |||||||||| ||||    
T  5024029 tgtatttcatccttgcaattaggggtcgtttaaaaattgatacatgtattcgctaatccttgcaaac 5024095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 462
Target Start/End: Complemental strand, 6150838 - 6150788
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattc 462  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  6150838 tgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgtattc 6150788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 11047854 - 11047789
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||| ||||| ||||||||||||| || |||||||||||||||||||| ||||    
T  11047854 tgtatttcatccttgcaagtaggggtcgtttaaaaattggt-catgtattcactaatccttgcaaac 11047789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 11740697 - 11740763
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| |||||||||||||  ||||| ||||| |||||||||| ||||    
T  11740697 tgtatttcatccttgcaattaggggtcgtttaaaaattgatccatatattcgctaatccttgcaaac 11740763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 11762135 - 11762069
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| ||||||| |||||||||| ||||    
T  11762135 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaac 11762069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 16083361 - 16083295
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||||||||||||| |||||||||||||||| || ||| ||||| |||||||||| ||||    
T  16083361 tgtatttcatccttgcaattaaggatcgtttaaaaattggttcatatattcgctaatccttgcaaac 16083295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 17202817 - 17202751
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| ||||||||||||  |||| ||||||| |||||||||| ||||    
T  17202817 tgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgtattcgctaatccttgcaaac 17202751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 19518025 - 19517959
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| | ||||||||||| |||||||||||| |||||| ||| ||||    
T  19518025 tgtatttcatccttgcaattaggggtagtttaaaaattagtccatgtattcgctaatctttgcaaac 19517959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 27587533 - 27587467
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| ||||||| |||||||||| ||||    
T  27587533 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtattcgctaatccttgcaaac 27587467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 28770879 - 28770945
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| ||||||| |||||||||| ||||    
T  28770879 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaac 28770945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 35512532 - 35512466
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| ||||||||||||| |||| ||||||| | |||||||| ||||    
T  35512532 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgccaatccttgcaaac 35512466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 42265745 - 42265811
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||| ||||||||||| ||||||||||||| |||| ||||||| |||||||||| ||||    
T  42265745 tgtatttcatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaac 42265811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 412 - 468
Target Start/End: Original strand, 18247096 - 18247152
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaat 468  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||| || |||||    
T  18247096 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaat 18247152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 412 - 472
Target Start/End: Complemental strand, 43159232 - 43159172
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcctt 472  Q
    |||||||||||||||||||||||| ||||||||||||| |||  ||||||| |||||||||    
T  43159232 tgtatttcatccttgcaattaggggtcgtttaaaaattggtcgttgtattcgctaatcctt 43159172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 415 - 478
Target Start/End: Complemental strand, 5994304 - 5994241
Alignment:
Q  415 atttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||| || ||||||||||||| || ||||||||| |||||||||| ||||    
T  5994304 atttcatccttgcaattaagggtcgtttaaaaattggttcatgtattcgctaatccttgcaaac 5994241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 3528883 - 3528949
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| ||||||  |||||||||| ||||    
T  3528883 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtatttgctaatccttgcaaac 3528949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 8322822 - 8322756
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| ||||||||||||| ||||  ||||||  ||||||||| ||||    
T  8322822 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccccgtattcgttaatccttgcaaac 8322756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 16156865 - 16156931
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||| ||||||||||||| ||||||||||||| ||| ||||||||  ||||||||| ||||    
T  16156865 tgtatttcatacttgcaattaggggtcgtttaaaaattggtctatgtattcgttaatccttgcaaac 16156931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 18247494 - 18247428
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| |||||||||| || |||  ||||||| |||||||||| ||||    
T  18247494 tgtatttcatccttgcaattaggggtcgtttaaaatttggtctctgtattcgctaatccttgcaaac 18247428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 28269432 - 28269498
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||| |||||||||||| ||||||||||||| ||||  |||||| |||||||||| ||||    
T  28269432 tgtatttcatcattgcaattaggggtcgtttaaaaattggtcccagtattcgctaatccttgcaaac 28269498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 29646372 - 29646438
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| ||||||| |||||||| || |||||||||| |||||||||||| |||||||||| ||||    
T  29646372 tgtattttatccttgtaattaggggtcttttaaaaattggtccatgtattcgctaatccttgcaaac 29646438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 32242659 - 32242594
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| | ||||||||||| |||| ||||||| |||||||||| ||||    
T  32242659 tgtatttcatccttgcaattaggggttgtttaaaaattagtcc-tgtattcgctaatccttgcaaac 32242594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 39453717 - 39453651
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| || |||||||||| |||| ||||||| |||||| ||| ||||    
T  39453717 tgtatttcatccttgcaattaggggtcatttaaaaattggtccctgtattcgctaatctttgcaaac 39453651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 412 - 468
Target Start/End: Original strand, 5993899 - 5993955
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaat 468  Q
    |||||||||||||||||||||||| ||||||||||||| |||| |||| || |||||    
T  5993899 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaat 5993955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 415 - 459
Target Start/End: Complemental strand, 38475414 - 38475370
Alignment:
Q  415 atttcatccttgcaattagggatcgtttaaaaatttgtccatgta 459  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||    
T  38475414 atttcatccttgcaattaggggtcgtttaaaaattggtccatgta 38475370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 5024436 - 5024377
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    |||||||||||||||||||||||| ||||||||||||| |||  |||| || ||||||||    
T  5024436 tgtatttcatccttgcaattaggggtcgtttaaaaattggtcattgtaatcgctaatcct 5024377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 11761759 - 11761818
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| |||| || ||||||||    
T  11761759 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 11761818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 20814553 - 20814494
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    |||||||||||||||||||||||| ||||||||||||| |||  |||| || ||||||||    
T  20814553 tgtatttcatccttgcaattaggggtcgtttaaaaattggtcactgtaatcgctaatcct 20814494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 27587158 - 27587217
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| |||| || ||||||||    
T  27587158 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 27587217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 35512158 - 35512217
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||||||||||||||||| || ||||||||||||| |||| |||| || ||||||||    
T  35512158 tgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtaatcgctaatcct 35512217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 39453310 - 39453369
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    |||||||||||||||||||||||| ||||||||||||| |||  |||| || ||||||||    
T  39453310 tgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcct 39453369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 186837 - 186771
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||| | ||||||||||||| |||| ||||||  |||||| ||| ||||    
T  186837 tgtatttcatccttgcaattagaggtcgtttaaaaattggtccctgtatttgctaatctttgcaaac 186771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 454
Target Start/End: Complemental strand, 16157273 - 16157231
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtcc 454  Q
    |||||||||||||||||||||||| ||||||||||||| ||||    
T  16157273 tgtatttcatccttgcaattaggggtcgtttaaaaattggtcc 16157231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 21257579 - 21257513
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||| ||||||||||| ||||||||||||| | |  ||||||| |||||||||| ||||    
T  21257579 tgtatttcatccctgcaattaggggtcgtttaaaaattggacactgtattcgctaatccttgcaaac 21257513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 38442485 - 38442419
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| ||||||||||||  || | |||||||  ||||||||| ||||    
T  38442485 tgtatttcatccttgcaattaggggtcgtttaaaaatgggttcttgtattcgttaatccttgcaaac 38442419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 469
Target Start/End: Complemental strand, 13362646 - 13362589
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatc 469  Q
    ||||||||||| |||||||||||| ||||||||||||| |||| |||| || ||||||    
T  13362646 tgtatttcatcattgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatc 13362589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 469
Target Start/End: Original strand, 18670212 - 18670269
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatc 469  Q
    |||||||||||||||||| ||||| ||||||||||||| |||| |||| || ||||||    
T  18670212 tgtatttcatccttgcaagtaggggtcgtttaaaaattggtccctgtaatcgctaatc 18670269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 449
Target Start/End: Original strand, 20840543 - 20840580
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatt 449  Q
    |||||||||||||||||||||||| |||||||||||||    
T  20840543 tgtatttcatccttgcaattaggggtcgtttaaaaatt 20840580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 469
Target Start/End: Complemental strand, 28771256 - 28771199
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatc 469  Q
    ||||||| ||||||| |||||||| ||||||||||||| ||||||||| || ||||||    
T  28771256 tgtatttgatccttgtaattaggggtcgtttaaaaattggtccatgtaatcgctaatc 28771199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 449
Target Start/End: Original strand, 32242252 - 32242289
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatt 449  Q
    |||||||||||||||||||||||| |||||||||||||    
T  32242252 tgtatttcatccttgcaattaggggtcgtttaaaaatt 32242289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 428 - 473
Target Start/End: Original strand, 35920254 - 35920299
Alignment:
Q  428 aattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||||||||||||||||||| ||| |||||||| ||||||||||    
T  35920254 aattagggatcgtttaaaaattggtcaatgtattcgctaatccttg 35920299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 417 - 478
Target Start/End: Original strand, 37991214 - 37991275
Alignment:
Q  417 ttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| ||||||||||| ||||||||||||| |||| |||||||  ||||||||| ||||    
T  37991214 ttcatccctgcaattaggggtcgtttaaaaattggtccctgtattcgttaatccttgcaaac 37991275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 414 - 478
Target Start/End: Complemental strand, 13963245 - 13963181
Alignment:
Q  414 tatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||||| ||||| || ||||||||||||| ||| ||||||||  ||||||||| ||||    
T  13963245 tatttcatccttgtaattatgggtcgtttaaaaattggtctatgtattcgttaatccttgcaaac 13963181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 459
Target Start/End: Complemental strand, 3529260 - 3529213
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgta 459  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| ||||    
T  3529260 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgta 3529213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 6301959 - 6301895
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||  |||||||||||| ||||||||||||| |||| |||||||  ||||||||| ||||    
T  6301959 tgtatttcat--ttgcaattaggggtcgtttaaaaattggtccttgtattcgttaatccttgcaaac 6301895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 24547543 - 24547484
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| | || || ||||||||    
T  24547543 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccttataatcgctaatcct 24547484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 35920602 - 35920543
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||||||| | |||||||||| ||||||||||||| |||| |||| || ||||||||    
T  35920602 tgtatttcatcatagcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 35920543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 20814146 - 20814211
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||| ||||||| | ||||||||||||| || | ||||||| |||||||||| ||||    
T  20814146 tgtatttcatccttacaattagaggtcgtttaaaaattggt-cttgtattcgctaatccttgcaaac 20814211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 478
Target Start/End: Original strand, 24547195 - 24547253
Alignment:
Q  420 atccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||| ||||| ||||||| |||| |||| || |||||||||| ||||    
T  24547195 atccttgcaattaggggtcgttaaaaaattggtccctgtaatcgctaatccttgcaaac 24547253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 38475043 - 38475109
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||| | |||||||  | || |||||||||| |||||||||||| |||||||||| ||||    
T  38475043 tgtatttcatcatagcaattaaaggtcatttaaaaattggtccatgtattcgctaatccttgcaaac 38475109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 473
Target Start/End: Complemental strand, 5256429 - 5256369
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    ||||| || ||||||||||||||| ||||||||||||| ||| ||||| | |||||||||||    
T  5256429 tgtatctcgtccttgcaattaggg-tcgtttaaaaattggtcaatgtaatgactaatccttg 5256369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 473
Target Start/End: Complemental strand, 5835844 - 5835783
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||||||||||||||||||||  | ||||||||||| ||   ||||||| ||||||||||    
T  5835844 tgtatttcatccttgcaattaggagttgtttaaaaattggtttctgtattcgctaatccttg 5835783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 414 - 459
Target Start/End: Original strand, 13962876 - 13962921
Alignment:
Q  414 tatttcatccttgcaattagggatcgtttaaaaatttgtccatgta 459  Q
    ||||| |||||||||||||||| ||||||||||||| |||| ||||    
T  13962876 tattttatccttgcaattaggggtcgtttaaaaattggtccctgta 13962921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 414 - 471
Target Start/End: Original strand, 17202411 - 17202468
Alignment:
Q  414 tatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    |||||||||||| ||||||||| ||||||||||||| |||  |||| || ||||||||    
T  17202411 tatttcatccttccaattaggggtcgtttaaaaattggtcactgtaatcgctaatcct 17202468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 449
Target Start/End: Complemental strand, 19892726 - 19892689
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatt 449  Q
    |||||||||||||||||||||| | |||||||||||||    
T  19892726 tgtatttcatccttgcaattagaggtcgtttaaaaatt 19892689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 449
Target Start/End: Complemental strand, 20840855 - 20840818
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatt 449  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  20840855 tgtatttcatccttacaattaggggtcgtttaaaaatt 20840818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 449
Target Start/End: Complemental strand, 27937417 - 27937380
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatt 449  Q
    ||||||||||||||||||||| || |||||||||||||    
T  27937417 tgtatttcatccttgcaattatgggtcgtttaaaaatt 27937380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 2e-17; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 10781902 - 10781836
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||| ||||||||||||| |||||||||||| |||||||||| ||||    
T  10781902 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaac 10781836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 11108258 - 11108192
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||||||||||||||||||||||||||||||  ||| ||||||| |||||||||| ||||    
T  11108258 tgtatttcatccttgcaattagggatcgtttaaaaattgatccttgtattcgctaatccttgcaaac 11108192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 51692937 - 51692871
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||| ||||    
T  51692937 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaac 51692871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 46661332 - 46661273
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    |||||||||||||||||||||||| ||||||||||||| |||| |||||| |||||||||    
T  46661332 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtatttactaatcct 46661273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 1179218 - 1179152
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| ||| |||||||||||| ||||||||||||| |||||||||||| |||||||||| ||||    
T  1179218 tgtattttatctttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaac 1179152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 10780723 - 10780789
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||| ||||||||||||| ||||||| |||| |||||||||| ||||    
T  10780723 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgcattcgctaatccttgcaaac 10780789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 10974332 - 10974398
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||| ||||||||||||| ||||||| |||| |||||||||| ||||    
T  10974332 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgcattcgctaatccttgcaaac 10974398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 18831735 - 18831669
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| ||||||||||||| |||| ||||||| |||||| ||| ||||    
T  18831735 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcattgcaaac 18831669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 24349684 - 24349750
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| ||||||| |||||||||| ||||    
T  24349684 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaac 24349750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 35028008 - 35028074
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||| ||||||||||||| || | ||||||| |||||||||| ||||    
T  35028008 tgtatttcatccttgcaattaggggtcgtttaaaaattggttcctgtattcgctaatccttgcaaac 35028074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 52909671 - 52909605
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||||||||||||| ||||| |||||||||| ||| |||||||| |||||||||| ||||    
T  52909671 tgtatttcatccttgcaattatggatcatttaaaaattggtctatgtattcgctaatccttgcaaac 52909605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 412 - 472
Target Start/End: Original strand, 54086705 - 54086765
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcctt 472  Q
    |||||||||||||||||||||||| ||||||||||||| |||  ||||||| |||||||||    
T  54086705 tgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatcctt 54086765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 5368957 - 5369016
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||| |||||||||||||||||||||||||||||| |||| |||| || ||||||||    
T  5368957 tgtatttgatccttgcaattagggatcgtttaaaaattggtccttgtaatcgctaatcct 5369016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 147329 - 147395
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||| | ||||||||| ||||||||||||| |||| ||||||| |||||||||| ||||    
T  147329 tgtatttcatccctacaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaac 147395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 7452221 - 7452155
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||| ||||||||||||| |||  ||||||| |||||||||| ||||    
T  7452221 tgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaac 7452155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 13058400 - 13058334
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| ||||||||||| |||| ||||||||||||| |||| ||||||| |||||||||| ||||    
T  13058400 tgtatttgatccttgcaataaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaac 13058334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 414 - 468
Target Start/End: Complemental strand, 14802151 - 14802097
Alignment:
Q  414 tatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaat 468  Q
    |||||||||||||||||||| ||||||||||||||| |||| ||||||| |||||    
T  14802151 tatttcatccttgcaattagagatcgtttaaaaattggtccttgtattcgctaat 14802097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 15507683 - 15507749
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||||||||||||| || ||||||||||||| |||| | ||||| |||||||||| ||||    
T  15507683 tgtatttcatccttgcaattaagggtcgtttaaaaattggtccctatattcgctaatccttgcaaac 15507749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 24350850 - 24350784
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| || |||| |||||||||| ||||    
T  24350850 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgcattcgctaatccttgcaaac 24350784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 24411766 - 24411700
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||||||||||||| || |||||||||||||  ||| ||||||| |||||||||| ||||    
T  24411766 tgtatttcatccttgcaattaagggtcgtttaaaaattgatccctgtattcgctaatccttgcaaac 24411700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 36008854 - 36008920
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| ||||||| |||||||||||||||||||||| |||| ||||||| |||||| ||| ||||    
T  36008854 tgtatttgatccttgtaattagggatcgtttaaaaattggtccctgtattcgctaatcattgcaaac 36008920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 37248623 - 37248557
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| |||| || |||||||||| ||||    
T  37248623 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaac 37248557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 43155539 - 43155605
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| ||||||||||||| || ||||||||||||| |||| ||||||| |||||||||| ||||    
T  43155539 tgtatttgatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaac 43155605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 412 - 469
Target Start/End: Original strand, 23613319 - 23613376
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatc 469  Q
    ||||||| |||||||||||||||| ||||||||||||| ||||||||| || ||||||    
T  23613319 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatc 23613376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 412 - 473
Target Start/End: Complemental strand, 23613696 - 23613635
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    ||||||| |||||||||||||||| |||||||||||||  ||| ||||||| ||||||||||    
T  23613696 tgtatttgatccttgcaattaggggtcgtttaaaaattgatccctgtattcgctaatccttg 23613635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 412 - 472
Target Start/End: Original strand, 44967079 - 44967139
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcctt 472  Q
    ||||||| |||||||||||||||| ||||||||||||| |||  ||||||| |||||||||    
T  44967079 tgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatcctt 44967139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 15508090 - 15508032
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    |||||||||||||||||||||||| ||||||||||| |||||| |||| || ||||||||    
T  15508090 tgtatttcatccttgcaattaggggtcgtttaaaaa-ttgtccttgtaatcgctaatcct 15508032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 24711121 - 24711180
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| |||| || ||||||||    
T  24711121 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 24711180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 34765798 - 34765739
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||| |||||||||||||||| ||||||||||||| || |||||| || ||||||||    
T  34765798 tgtattttatccttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcct 34765739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 148173 - 148107
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||| ||||||||||| ||||||||||||| |||| | |||||  ||||||||| ||||    
T  148173 tgtatttcatccctgcaattaggggtcgtttaaaaattggtccctttattcgttaatccttgcaaac 148107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 458
Target Start/End: Complemental strand, 24711498 - 24711452
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgt 458  Q
    ||||||| |||||||||||||||| ||||||||||||| ||||||||    
T  24711498 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgt 24711452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 34765390 - 34765456
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| ||||||||||||| || ||||||||||||  |||| ||||||| |||||||||| ||||    
T  34765390 tgtattttatccttgcaattaagggtcgtttaaaaatcggtccttgtattcgctaatccttgcaaac 34765456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 49879217 - 49879283
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| |||| |  |||||||||| ||||    
T  49879217 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaattgctaatccttgcaaac 49879283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 50418678 - 50418744
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| |||| ||  ||||||||| ||||    
T  50418678 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatccttgcaaac 50418744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 55867532 - 55867466
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||| ||||||||||| ||||||||||||| ||||||||| ||  ||||||||| ||||    
T  55867532 tgtatttgatccctgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatccttgcaaac 55867466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 473
Target Start/End: Original strand, 1178067 - 1178127
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    ||||||||||||||| |||||| | ||||||||||||| || ||||||||| ||||||||||    
T  1178067 tgtatttcatccttgtaattagaggtcgtttaaaaattggt-catgtattcgctaatccttg 1178127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 469
Target Start/End: Complemental strand, 17356340 - 17356283
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatc 469  Q
    |||||||||||||| |||||| || ||||||||||||| |||| ||||||| ||||||    
T  17356340 tgtatttcatccttccaattacgggtcgtttaaaaattggtccctgtattcgctaatc 17356283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 473
Target Start/End: Complemental strand, 35028416 - 35028355
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||||||||||||||||||||| |  |||||||||| |||||| | ||| ||||||||||    
T  35028416 tgtatttcatccttgcaattaggggtattttaaaaattggtccatatgttcgctaatccttg 35028355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 412 - 472
Target Start/End: Complemental strand, 16006211 - 16006151
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcctt 472  Q
    ||||||| || ||||||||||||| ||||||||||||| |||  ||||||| |||||||||    
T  16006211 tgtatttgattcttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatcctt 16006151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 262 - 298
Target Start/End: Complemental strand, 35232568 - 35232532
Alignment:
Q  262 atttaaataataattcctccgttcctttttaagtgtc 298  Q
    |||||||||||| ||||||||||||||||||||||||    
T  35232568 atttaaataatacttcctccgttcctttttaagtgtc 35232532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 412 - 472
Target Start/End: Original strand, 53129516 - 53129576
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcctt 472  Q
    ||||||| ||| |||||||||||||||||||||||| |||  ||||||||  |||||||||    
T  53129516 tgtattttatcattgcaattagggatcgtttaaaaaattggtcatgtatttgctaatcctt 53129576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 459
Target Start/End: Original strand, 7451844 - 7451891
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgta 459  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| ||||    
T  7451844 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgta 7451891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 13058047 - 13058106
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||| |||||||||||||||| ||||||||||||| |||  |||| || ||||||||    
T  13058047 tgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcct 13058106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 14801746 - 14801805
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    |||||||||||||||||||||||  ||||||||||||| |||  |||| || ||||||||    
T  14801746 tgtatttcatccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcct 14801805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 18831359 - 18831418
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||| |||||| ||||||||| ||||||||||||| |||| |||| || ||||||||    
T  18831359 tgtatttgatccttacaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 18831418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 37248246 - 37248305
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||| | |||||||||||||| ||||||||||||| |||| |||| || ||||||||    
T  37248246 tgtatttgaaccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 37248305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 459
Target Start/End: Complemental strand, 39539336 - 39539289
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgta 459  Q
    ||||||||||||||||||||| || ||||||||||||| ||| |||||    
T  39539336 tgtatttcatccttgcaattaagggtcgtttaaaaattggtcaatgta 39539289  T

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Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 44967456 - 44967397
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||| |||||||||||||| | ||||||||||||| |||| |||| || ||||||||    
T  44967456 tgtatttgatccttgcaattagaggtcgtttaaaaattggtccctgtaatcgctaatcct 44967397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 50419055 - 50418996
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| | || || ||||||||    
T  50419055 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctctaatcgctaatcct 50418996  T

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Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 51692563 - 51692622
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    |||||||||||||||||||||| | |||||||||||||  || ||||| || ||||||||    
T  51692563 tgtatttcatccttgcaattagaggtcgtttaaaaattgatctatgtaatcgctaatcct 51692622  T

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Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 416 - 471
Target Start/End: Complemental strand, 52573640 - 52573585
Alignment:
Q  416 tttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    |||| ||||||||||||||  || |||||||||| ||||||||| |||||||||||    
T  52573640 tttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcactaatcct 52573585  T

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Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 414 - 449
Target Start/End: Original strand, 53701824 - 53701859
Alignment:
Q  414 tatttcatccttgcaattagggatcgtttaaaaatt 449  Q
    |||||||||||||||||||||| |||||||||||||    
T  53701824 tatttcatccttgcaattaggggtcgtttaaaaatt 53701859  T

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Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 17355935 - 17356001
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||||  ||||||||||||| ||   ||||||| |||||| ||| ||||    
T  17355935 tgtatttcatccttgcaattaggagtcgtttaaaaattggttgctgtattcgctaatctttgcaaac 17356001  T

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Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 421 - 459
Target Start/End: Original strand, 27934551 - 27934589
Alignment:
Q  421 tccttgcaattagggatcgtttaaaaatttgtccatgta 459  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  27934551 tccttgcaattaggggtcgtttaaaaatttgtccctgta 27934589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 37976163 - 37976229
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||||||||||||| | ||||||||||| | || | ||||||| |||||| ||| ||||    
T  37976163 tgtatttcatccttgcaattagaggtcgtttaaaaactggttcctgtattcgctaatctttgcaaac 37976229  T

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Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 462
Target Start/End: Original strand, 48528495 - 48528545
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattc 462  Q
    ||||||| |||||||||||||||| ||||||||||||| |||  |||||||    
T  48528495 tgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattc 48528545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 473
Target Start/End: Original strand, 55866121 - 55866180
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||||| ||| ||||||||||| ||||||||||||| ||   ||||||||||||||||||    
T  55866121 tgtatttcgtccctgcaattaggggtcgtttaaaaattggt--ttgtattcactaatccttg 55866180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 449
Target Start/End: Complemental strand, 53129924 - 53129887
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatt 449  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  53129924 tgtatttcatccttgcaatcaggggtcgtttaaaaatt 53129887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 412 - 473
Target Start/End: Complemental strand, 6497 - 6436
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||||||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||    
T  6497 tgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttg 6436  T

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Target: scaffold0031 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 68975 - 69034
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    |||||||||||||||||||||||| || |||||||||| |||| |||| |||||||||||    
T  68975 tgtatttcatccttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcct 69034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 69383 - 69317
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||||||||||||||   ||||||||||||| |||| ||||||| |||||||||| ||||    
T  69383 tgtatttcatccttgcaattagatgtcgtttaaaaattggtccctgtattcgctaatccttgcaaac 69317  T

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Target: scaffold0020 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 478
Target Start/End: Complemental strand, 140059 - 139993
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||| |||||||||||||||| | ||||||||||| |||| ||||||||||||| |||| ||||    
T  140059 tgtatttgatccttgcaattaggggttgtttaaaaattggtccctgtattcactaattcttgcaaac 139993  T

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Target: scaffold0020; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 139682 - 139741
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| |||| || ||||||||    
T  139682 tgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 139741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 414 - 468
Target Start/End: Original strand, 37576 - 37630
Alignment:
Q  414 tatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaat 468  Q
    |||||||||||||||||||| ||||||||||||||| |||| ||||||| |||||    
T  37576 tatttcatccttgcaattagagatcgtttaaaaattggtccttgtattcgctaat 37630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 37981 - 37922
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatcct 471  Q
    |||||||||||||||||||||||  ||||||||||||| |||  |||| || ||||||||    
T  37981 tgtatttcatccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcct 37922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 14439 - 14505
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    ||||||||||| |||||||||||  ||||||||||||| ||| || ||||| |||||||||| ||||    
T  14439 tgtatttcatcattgcaattaggagtcgtttaaaaattagtctatttattcgctaatccttgcaaac 14505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 415 - 449
Target Start/End: Complemental strand, 14805 - 14771
Alignment:
Q  415 atttcatccttgcaattagggatcgtttaaaaatt 449  Q
    ||||||||||||||||||||| |||||||||||||    
T  14805 atttcatccttgcaattaggggtcgtttaaaaatt 14771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 4972 - 5038
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttgaaaac 478  Q
    |||||||||||| | ||||||||| |||||||||||||  ||| | ||||| |||||||||| ||||    
T  4972 tgtatttcatccctacaattaggggtcgtttaaaaattgatccctatattcgctaatccttgcaaac 5038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 454
Target Start/End: Complemental strand, 2159 - 2117
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtcc 454  Q
    ||||||| |||||||||||||||| ||||||||||||| ||||    
T  2159 tgtatttgatccttgcaattaggggtcgtttaaaaattggtcc 2117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 469
Target Start/End: Original strand, 1779 - 1836
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatc 469  Q
    ||||||| |||||||||||||||| ||||| ||||||| |||| |||| || ||||||    
T  1779 tgtatttgatccttgcaattaggggtcgttaaaaaattggtccctgtaatcgctaatc 1836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1130 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold1130
Description:

Target: scaffold1130; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 302
Target Start/End: Original strand, 290 - 327
Alignment:
Q  265 taaataataattcctccgttcctttttaagtgtctttt 302  Q
    |||||| || ||||||||||||||||||||||||||||    
T  290 taaatagtacttcctccgttcctttttaagtgtctttt 327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 416 - 469
Target Start/End: Original strand, 934 - 987
Alignment:
Q  416 tttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatc 469  Q
    |||| |||||||||||||| ||| |||||||||| ||||||||| || ||||||    
T  934 tttcgtccttgcaattaggcatcatttaaaaattagtccatgtaatcgctaatc 987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 449
Target Start/End: Complemental strand, 2547 - 2510
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatt 449  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  2547 tgtatttcattcttgcaattagggatcgttttaaaatt 2510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 473
Target Start/End: Original strand, 19867 - 19928
Alignment:
Q  412 tgtatttcatccttgcaattagggatcgtttaaaaatttgtccatgtattcactaatccttg 473  Q
    |||||||| |||||||||||| || ||||||||||||| |||| |||  || ||||||||||    
T  19867 tgtatttcgtccttgcaattatgggtcgtttaaaaattggtccctgtgatcgctaatccttg 19928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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