View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16551_high_19 (Length: 419)

Name: NF16551_high_19
Description: NF16551
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16551_high_19
NF16551_high_19
[»] chr7 (11 HSPs)
chr7 (19-238)||(21573808-21574027)
chr7 (239-328)||(33994240-33994331)
chr7 (239-328)||(21880180-21880271)
chr7 (265-328)||(8234174-8234237)
chr7 (274-332)||(7197274-7197332)
chr7 (240-327)||(20549820-20549909)
chr7 (239-328)||(9778528-9778624)
chr7 (239-328)||(15680837-15680928)
chr7 (239-310)||(598254-598327)
chr7 (298-331)||(11272587-11272620)
chr7 (267-332)||(21864832-21864897)
[»] chr3 (12 HSPs)
chr3 (239-328)||(20503493-20503584)
chr3 (239-328)||(55401103-55401194)
chr3 (267-332)||(26492175-26492240)
chr3 (239-328)||(40993275-40993366)
chr3 (239-322)||(13845465-13845550)
chr3 (239-332)||(7171525-7171620)
chr3 (356-406)||(8587074-8587124)
chr3 (240-328)||(8789489-8789581)
chr3 (241-328)||(28918029-28918120)
chr3 (292-332)||(8383281-8383321)
chr3 (282-330)||(15505775-15505823)
chr3 (292-328)||(25775537-25775573)
[»] chr1 (15 HSPs)
chr1 (236-332)||(46348320-46348418)
chr1 (237-328)||(22515825-22515918)
chr1 (239-328)||(18337357-18337448)
chr1 (239-328)||(51410053-51410144)
chr1 (265-328)||(1815285-1815348)
chr1 (240-328)||(40258874-40258964)
chr1 (268-328)||(18190079-18190139)
chr1 (236-308)||(47989556-47989630)
chr1 (298-332)||(9629901-9629935)
chr1 (298-332)||(28273089-28273123)
chr1 (239-326)||(37598861-37598950)
chr1 (292-328)||(19058851-19058887)
chr1 (292-328)||(24334700-24334736)
chr1 (239-308)||(25934675-25934746)
chr1 (239-308)||(32461393-32461464)
[»] chr2 (11 HSPs)
chr2 (241-328)||(2438661-2438750)
chr2 (237-328)||(18840951-18841044)
chr2 (238-320)||(38117098-38117182)
chr2 (239-328)||(20242667-20242758)
chr2 (239-308)||(24009343-24009414)
chr2 (239-326)||(15972903-15972992)
chr2 (292-406)||(19536392-19536501)
chr2 (275-328)||(30404828-30404881)
chr2 (292-332)||(20473346-20473386)
chr2 (292-328)||(21624295-21624331)
chr2 (268-328)||(29176464-29176524)
[»] chr6 (15 HSPs)
chr6 (239-328)||(34595162-34595253)
chr6 (242-328)||(32978842-32978930)
chr6 (239-328)||(7977770-7977861)
chr6 (239-308)||(18367895-18367966)
chr6 (237-328)||(13360311-13360403)
chr6 (238-328)||(28152126-28152218)
chr6 (237-328)||(24645509-24645602)
chr6 (239-328)||(4877971-4878061)
chr6 (240-328)||(17841530-17841620)
chr6 (265-328)||(28715323-28715386)
chr6 (287-329)||(16388207-16388249)
chr6 (240-328)||(9658907-9658998)
chr6 (239-308)||(16766756-16766827)
chr6 (268-328)||(26402651-26402711)
chr6 (292-328)||(27904031-27904067)
[»] chr5 (6 HSPs)
chr5 (241-328)||(21190998-21191087)
chr5 (239-328)||(21576685-21576776)
chr5 (265-328)||(42893388-42893451)
chr5 (287-328)||(6247650-6247691)
chr5 (292-328)||(15884016-15884052)
chr5 (239-328)||(28588614-28588705)
[»] chr4 (15 HSPs)
chr4 (238-328)||(23292925-23293017)
chr4 (239-328)||(2361915-2362006)
chr4 (239-328)||(16073422-16073513)
chr4 (269-328)||(12797310-12797369)
chr4 (240-308)||(30982808-30982878)
chr4 (237-328)||(28964186-28964279)
chr4 (267-328)||(29205472-29205533)
chr4 (265-321)||(34306772-34306828)
chr4 (265-328)||(4157464-4157527)
chr4 (265-328)||(21945531-21945594)
chr4 (297-332)||(28000742-28000777)
chr4 (271-328)||(4157177-4157234)
chr4 (239-308)||(23861369-23861440)
chr4 (292-328)||(42640557-42640593)
chr4 (239-328)||(49431054-49431145)
[»] scaffold0083 (1 HSPs)
scaffold0083 (239-328)||(45470-45561)
[»] scaffold0053 (1 HSPs)
scaffold0053 (239-332)||(8822-8917)
[»] chr8 (7 HSPs)
chr8 (239-328)||(31557024-31557115)
chr8 (238-308)||(34450960-34451032)
chr8 (239-328)||(33405324-33405415)
chr8 (265-324)||(20679363-20679422)
chr8 (292-330)||(22204667-22204705)
chr8 (239-308)||(3951476-3951547)
chr8 (292-328)||(4948680-4948716)
[»] scaffold0652 (1 HSPs)
scaffold0652 (240-326)||(403-491)
[»] scaffold0022 (1 HSPs)
scaffold0022 (238-332)||(90867-90963)
[»] scaffold0361 (1 HSPs)
scaffold0361 (239-328)||(14558-14646)
[»] scaffold0049 (1 HSPs)
scaffold0049 (292-328)||(63801-63837)


Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-106; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 19 - 238
Target Start/End: Original strand, 21573808 - 21574027
Alignment:
Q  19 ttctgcttgtgattccttttgttatcgttcgatgaatccatcactcttcctctacttgatctccttgagaggtgtaggaaactcgaaactcgaatgaggt 118  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21573808 ttctgcttgtgattccttttgttatcgttcgaggaatccatcactcttcctctacttgatctccttgagagttgtaggaaactcgaaactcgaatgaggt 21573907  T
Q  119 tgcctagtgtaatgctcttgtcatggaagaatgatccagtggactgtacaaaaacatgtcaaatgagttaggcaaactgtcacatgaatgatgctataaa 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  21573908 tgcctagtgtaatgctcttgtcatggaagaatgatccagtggactgtacaaaaacatgtcaagtgagttaggcaaaatgtgacatgaatgatgctataaa 21574007  T
Q  219 caagtaaattacattccaaa 238  Q
    |||||||| |||||||||||    
T  21574008 caagtaaaatacattccaaa 21574027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 33994331 - 33994240
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||||| |||| |||||| ||||||  |||||||||||||||  ||||||||  ||||||||||||||||||||||||  |||||||||||    
T  33994331 ctatgaaacacgaacactccttggattaggcgtgtctcggtgttggacatgtgtcgtgtctgacaccgacacttgtaattgcactgaattat 33994240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 21880271 - 21880180
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||||||||||||||||  | ||||  ||||||||  |||||| ||||||||  ||||| |||||||||||||||||| ||||||||||||    
T  21880271 ctatgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattat 21880180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 328
Target Start/End: Complemental strand, 8234237 - 8234174
Alignment:
Q  265 ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    |||||||||||||||| ||||||||  ||||| ||||||| |||||||||  ||||||||||||    
T  8234237 ggcgtgtctcggtgtcggacatgtgtcgtgtccgacaccggcacttgtaactacactgaattat 8234174  T

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Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 332
Target Start/End: Original strand, 7197274 - 7197332
Alignment:
Q  274 cggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattatatga 332  Q
    ||||||| |||||||| |||||| |||||||||||||||||| ||| ||||||| ||||    
T  7197274 cggtgtcggacatgtgttgtgtccgacaccgacacttgtaattacattgaattaaatga 7197332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 327
Target Start/End: Complemental strand, 20549909 - 20549820
Alignment:
Q  240 tatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaatta 327  Q
    |||||||||||| ||||| | ||||  ||||||||||  |||| |||||||| |||||| ||||||||||| | |||| |||||||||||    
T  20549909 tatgaagcacgggcactcctcggattaggcgtgtctcattgtcggacatgtgttgtgtccgacaccgacacatataattacactgaatta 20549820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 9778624 - 9778528
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtc-----tgacaccgacacttgtaatcacactgaattat 328  Q
    ||||||||||||||||||| ||||||  |||||||| ||||||| |||| ||| ||||||      |||||||||||||||||| | ||||||||||    
T  9778624 ctatgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacacgacaccgacacttgtaattatactgaattat 9778528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 15680928 - 15680837
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||||||||||||||||| | | ||  | |||||||||||||| |||| |||  ||||| ||||||||||||| |||| ||||| ||||||    
T  15680928 ctatgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactaaattat 15680837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 310
Target Start/End: Complemental strand, 598327 - 598254
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacactt 310  Q
    ||||||||||||||||||  | ||||  |||||||| ||||||| |||| |||  |||||||||||||||||||    
T  598327 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacactt 598254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 331
Target Start/End: Original strand, 11272587 - 11272620
Alignment:
Q  298 gacaccgacacttgtaatcacactgaattatatg 331  Q
    |||||||||||||||||| |||||||||||||||    
T  11272587 gacaccgacacttgtaattacactgaattatatg 11272620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 332
Target Start/End: Complemental strand, 21864897 - 21864832
Alignment:
Q  267 cgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattatatga 332  Q
    |||||| ||||||| |||| |||  ||||| |||| ||||||||||||| ||||| ||||||||||    
T  21864897 cgtgtcccggtgtcggacacgtgtcgtgtccgacagcgacacttgtaattacactaaattatatga 21864832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 7e-19; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 20503584 - 20503493
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||||||||||||||||| | ||||  |||||||| ||||||||||||||||  |||||  ||||||||||||||||| ||||||||||||    
T  20503584 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacacttgtaattacactgaattat 20503493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 55401194 - 55401103
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||||||||||||||||| | ||||  |||||||||||||||| |||| |||  ||||| |||||||||||||||||| ||||| ||||||    
T  55401194 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattat 55401103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 267 - 332
Target Start/End: Original strand, 26492175 - 26492240
Alignment:
Q  267 cgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattatatga 332  Q
    ||||||| |||||||||||||||  ||||| |||||||| ||||||||| |||||||||| |||||    
T  26492175 cgtgtcttggtgtcagacatgtgtcgtgtccgacaccgatacttgtaattacactgaattgtatga 26492240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 328
Target Start/End: Original strand, 40993275 - 40993366
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    |||||||||| |||||||| | ||||  |||||||| ||||||| ||||||||  ||||| ||||||||||| | |||| ||||||||||||    
T  40993275 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattat 40993366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 13845465 - 13845550
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactg 322  Q
    ||||||||||||||||||| ||||||  |||||||||| |||||||||| ||   ||||| ||||||||||| | |||| ||||||    
T  13845465 ctatgaagcacggacactccttggataaggcgtgtctccgtgtcagacacgtctcgtgtccgacaccgacacatataattacactg 13845550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 332
Target Start/End: Complemental strand, 7171620 - 7171525
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattatatga 332  Q
    ||||||||||   |||||| ||||||  |||||||| ||||||| |||| |||  ||||| |||||| ||||||||||| |||| |||||||||||    
T  7171620 ctatgaagcatatacactccttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacaccaacacttgtaattacaccgaattatatga 7171525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 406
Target Start/End: Original strand, 8587074 - 8587124
Alignment:
Q  356 atgtatcgacgtgtcagtgtccgtgtcttgtccgttgtccctatctgtgct 406  Q
    |||| ||| |||||||||||||||||| |||||| ||||| ||||||||||    
T  8587074 atgtgtcggcgtgtcagtgtccgtgtcatgtccggtgtccgtatctgtgct 8587124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 328
Target Start/End: Original strand, 8789489 - 8789581
Alignment:
Q  240 tatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagaca--tgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    |||||||||||||||||| | ||||  |||||||||||||||| ||||  ||||  ||||| ||||||||||| | |||| |||| |||||||    
T  8789489 tatgaagcacggacactcctcggattaggcgtgtctcggtgtccgacatgtgtgtcgtgtccgacaccgacacatataattacacggaattat 8789581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 328
Target Start/End: Complemental strand, 28918120 - 28918029
Alignment:
Q  241 atgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtct--gacaccgacacttgtaatcacactgaattat 328  Q
    |||||||| |||||||| ||||||  |||||||| | ||||| |||| |||  |||||   |||||||||||||||||| ||||||||||||    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtccacgacaccgacacttgtaattacactgaattat 28918029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 8383321 - 8383281
Alignment:
Q  292 gtgtctgacaccgacacttgtaatcacactgaattatatga 332  Q
    ||||| ||||||||||||| |||| ||||||||||||||||    
T  8383321 gtgtccgacaccgacacttataattacactgaattatatga 8383281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 330
Target Start/End: Original strand, 15505775 - 15505823
Alignment:
Q  282 gacatgtgctgtgtctgacaccgacacttgtaatcacactgaattatat 330  Q
    |||||||| |||||| |||||| |||||| |||| ||||||||||||||    
T  15505775 gacatgtgttgtgtccgacaccaacacttataattacactgaattatat 15505823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 328
Target Start/End: Complemental strand, 25775573 - 25775537
Alignment:
Q  292 gtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  25775573 gtgtccgacaccgacacttgtaattacactgaattat 25775537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 3e-18; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 236 - 332
Target Start/End: Original strand, 46348320 - 46348418
Alignment:
Q  236 aaactatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattatatga 332  Q
    |||||||||||||||||||| | | ||||  |||||||||||||||| |||| |||  ||||| |||||||||||||||||| ||||| ||||||||||    
T  46348320 aaactatgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatatga 46348418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 328
Target Start/End: Original strand, 22515825 - 22515918
Alignment:
Q  237 aactatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||||||||||||||||||| | ||||  |||||||||||||||| || |||||  ||||| |||||||||||||||||| ||||| ||||||    
T  22515825 aactatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaattat 22515918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 18337448 - 18337357
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||||||||||||||||| | ||||  ||| |||| | ||||| |||| ||| |||||| |||||||||||||||||| ||||||||||||    
T  18337448 ctatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattat 18337357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 51410144 - 51410053
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    |||||||||||| | |||| ||||||  |||||||||||||||| || | |||  ||||| |||||||||||||||||| ||||||||||||    
T  51410144 ctatgaagcacgaatactccttggattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgacacttgtaattacactgaattat 51410053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 328
Target Start/End: Complemental strand, 1815348 - 1815285
Alignment:
Q  265 ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    |||||||| ||||||| ||||||||  ||||| |||||||||||||||||| ||||||||||||    
T  1815348 ggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgacacttgtaattacactgaattat 1815285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 328
Target Start/End: Original strand, 40258874 - 40258964
Alignment:
Q  240 tatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||||||| |||||||| | ||||  ||||||||  |||||| |||| |||  |||||||||||||||||||||||| ||||||||||||    
T  40258874 tatgaagcatggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacacttgtaattacactgaattat 40258964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 328
Target Start/End: Original strand, 18190079 - 18190139
Alignment:
Q  268 gtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||| ||||||| |||| ||| ||||||||||| ||||||||||||| ||||||||||||    
T  18190079 gtgtcccggtgtcggacacgtgttgtgtctgacatcgacacttgtaattacactgaattat 18190139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 308
Target Start/End: Complemental strand, 47989630 - 47989556
Alignment:
Q  236 aaactatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacac 308  Q
    |||||||||||||||||||||| | ||||  |||||||| || |||||||||||||  ||||| |||||||||||    
T  47989630 aaactatgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacac 47989556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 332
Target Start/End: Original strand, 9629901 - 9629935
Alignment:
Q  298 gacaccgacacttgtaatcacactgaattatatga 332  Q
    ||||||||||||| |||||||||||||||||||||    
T  9629901 gacaccgacacttataatcacactgaattatatga 9629935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 332
Target Start/End: Original strand, 28273089 - 28273123
Alignment:
Q  298 gacaccgacacttgtaatcacactgaattatatga 332  Q
    |||||||||||||||||| ||||||||||||||||    
T  28273089 gacaccgacacttgtaattacactgaattatatga 28273123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 326
Target Start/End: Complemental strand, 37598950 - 37598861
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaatt 326  Q
    ||||||||||||||||||| | ||||  |||||||| |  |||| |||| |||  ||||| ||||||||||||| |||| ||||||||||    
T  37598950 ctatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaatt 37598861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 328
Target Start/End: Original strand, 19058851 - 19058887
Alignment:
Q  292 gtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  19058851 gtgtccgacaccgacacttgtaattacactgaattat 19058887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 328
Target Start/End: Original strand, 24334700 - 24334736
Alignment:
Q  292 gtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  24334700 gtgtccgacaccgacacttgtaattacactgaattat 24334736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 25934746 - 25934675
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacac 308  Q
    ||||||||||||||||||| ||||||  ||||| || | |||||||||| |||  ||||| |||||||||||    
T  25934746 ctatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacac 25934675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 308
Target Start/End: Original strand, 32461393 - 32461464
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacac 308  Q
    ||||||||||||||||||  ||||||  |||||||| | |||||||||| |||  ||||| |||||||||||    
T  32461393 ctatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacac 32461464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 241 - 328
Target Start/End: Original strand, 2438661 - 2438750
Alignment:
Q  241 atgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||||||||||||||| | ||||  |||||||| ||||||| ||||||||  ||||| |||||||||||||||||| ||||||||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattat 2438750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 328
Target Start/End: Original strand, 18840951 - 18841044
Alignment:
Q  237 aactatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||||||||||||||||||| | ||||  || ||||| ||||||| ||||||||  |||||||||||||||||||||||| ||||| ||||||    
T  18840951 aactatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacacttaattat 18841044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 238 - 320
Target Start/End: Original strand, 38117098 - 38117182
Alignment:
Q  238 actatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacac 320  Q
    |||||||||||||||||| | | ||||  |||||||| ||||||| |||| ||| |||||| |||||| ||||||||||| ||||    
T  38117098 actatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacacttgtaattacac 38117182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 328
Target Start/End: Original strand, 20242667 - 20242758
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||||||||| ||||||| | ||||  ||||||||   |||||||||| ||| |||||| ||||||||||| | |||| ||||||||||||    
T  20242667 ctatgaagcacagacactcttcggataaggcgtgtcctcgtgtcagacacgtgttgtgtccgacaccgacacatataattacactgaattat 20242758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 24009414 - 24009343
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacac 308  Q
    ||||||||||||||||||| ||||||  |||||||| | |||||||||| |||  ||||| |||||||||||    
T  24009414 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 24009343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 326
Target Start/End: Complemental strand, 15972992 - 15972903
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaatt 326  Q
    |||||||||||||||| || | ||||  || ||||| ||| ||| |||| |||  ||||| |||||||||||||||||| ||||||||||    
T  15972992 ctatgaagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaatt 15972903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 406
Target Start/End: Original strand, 19536392 - 19536501
Alignment:
Q  292 gtgtctgacaccgacacttgtaatcacactgaattatatgannnnnnnncttcaaagttattaaatgtatcgacgtgtcagtgtccgtgtcttgtccgtt 391  Q
    ||||| |||||||||||||||||| |||||||||||| |||         |||||| ||||||  ||| ||| ||||||| |||||||||| |||||| |    
T  19536392 gtgtccgacaccgacacttgtaattacactgaattatgtgattttt----ttcaaa-ttattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggt 19536486  T
Q  392 gtccctatctgtgct 406  Q
    |||| ||||||||||    
T  19536487 gtccgtatctgtgct 19536501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 328
Target Start/End: Original strand, 30404828 - 30404881
Alignment:
Q  275 ggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    |||||| ||||||||  ||||| ||| |||||||||||||| ||||||||||||    
T  30404828 ggtgtcggacatgtgtcgtgtccgacgccgacacttgtaattacactgaattat 30404881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 20473386 - 20473346
Alignment:
Q  292 gtgtctgacaccgacacttgtaatcacactgaattatatga 332  Q
    ||||| |||| ||||||||||||| ||||||||||||||||    
T  20473386 gtgtccgacatcgacacttgtaattacactgaattatatga 20473346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 328
Target Start/End: Complemental strand, 21624331 - 21624295
Alignment:
Q  292 gtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  21624331 gtgtccgacaccgacacttgtaattacactgaattat 21624295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 328
Target Start/End: Original strand, 29176464 - 29176524
Alignment:
Q  268 gtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||||| ||||| ||||||||| |||||  ||||| |||||| |||| ||||||||||||    
T  29176464 gtgtctcagtgtcggacatgtgccgtgtccaacaccaacacttataattacactgaattat 29176524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 34595253 - 34595162
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||||||||||||||||| | ||||  || ||||| |||||||||||| |||  ||||| |||||||||||||||||| ||||||||||||    
T  34595253 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattat 34595162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 242 - 328
Target Start/End: Original strand, 32978842 - 32978930
Alignment:
Q  242 tgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    |||||||||||||||| ||||||  | |||||| ||||||| ||||||||  ||||| |||||||||||||||||| ||||| ||||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacacttaattat 32978930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 328
Target Start/End: Original strand, 7977770 - 7977861
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    |||||||||||| |||||| || |||  ||||||| ||| |||| ||||| || |||||| |||||||||||||||||| ||||||||||||    
T  7977770 ctatgaagcacgaacactccttagattaggcgtgtttcgttgtcggacatatgttgtgtccgacaccgacacttgtaattacactgaattat 7977861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 18367966 - 18367895
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacac 308  Q
    ||||||||||||||||||| ||||||  |||||||| | ||||||||||||||  |||||||||||||||||    
T  18367966 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacac 18367895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 237 - 328
Target Start/End: Original strand, 13360311 - 13360403
Alignment:
Q  237 aactatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||||||||||||||||||| | ||||  |||||||||| ||||| ||||| || ||||||||||||||| || | |||| ||||||||||||    
T  13360311 aactatgaagcacggacactcttcggattaggcgtgtctcagtgtcggacat-tgttgtgtctgacaccgaaacatataattacactgaattat 13360403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 328
Target Start/End: Complemental strand, 28152218 - 28152126
Alignment:
Q  238 actatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||||||||||| |||||| | ||||  ||| |||| ||||||| |||| |||  ||||| |||||||||||||||||| ||||||||||||    
T  28152218 actatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattat 28152126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 328
Target Start/End: Complemental strand, 24645602 - 24645509
Alignment:
Q  237 aactatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||||||||||| ||||||| | ||||  | ||||||| |||||| |||| |||  |||||||||||||||||||||||  | ||||||||||    
T  24645602 aactatgaagcacagacactcttcggattagacgtgtcttggtgtcggacacgtgtcgtgtctgacaccgacacttgtaactatactgaattat 24645509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 4878061 - 4877971
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||||||||||||||||| | ||||  |||||||| | ||||| ||||||||  ||||| |||||||||||||||||| | ||| ||||||    
T  4878061 ctatgaagcacggacactcctcggattaggcgtgtc-ctgtgtcggacatgtgtcgtgtccgacaccgacacttgtaattatacttaattat 4877971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 240 - 328
Target Start/End: Original strand, 17841530 - 17841620
Alignment:
Q  240 tatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    |||||||||||||||||| | ||||  |||||||||| ||||| ||||  ||  ||||| ||||||| |||||||||| ||||| ||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacaccgtcacttgtaattacactaaattat 17841620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 265 - 328
Target Start/End: Complemental strand, 28715386 - 28715323
Alignment:
Q  265 ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    |||||||| |||||||  ||| |||  ||||| |||||||||||||||||| ||||||||||||    
T  28715386 ggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacacttgtaattacactgaattat 28715323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 329
Target Start/End: Original strand, 16388207 - 16388249
Alignment:
Q  287 gtgctgtgtctgacaccgacacttgtaatcacactgaattata 329  Q
    |||| ||||| |||||||||||||||||| |||||||||||||    
T  16388207 gtgccgtgtccgacaccgacacttgtaattacactgaattata 16388249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 328
Target Start/End: Complemental strand, 9658998 - 9658907
Alignment:
Q  240 tatgaagcacggacactcgttggat---ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    |||||||||||||||||| |||||    |||||||  |||||||||||| |||  |||||| |||||||||  | |||| ||||||||||||    
T  9658998 tatgaagcacggacactccttggaattaggcgtgttccggtgtcagacacgtgtcgtgtctaacaccgacaaatataattacactgaattat 9658907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 16766827 - 16766756
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacac 308  Q
    |||||||||||||||| || | ||||  |||||||| ||||||| |||| ||| |||||| |||||||||||    
T  16766827 ctatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacac 16766756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 328
Target Start/End: Original strand, 26402651 - 26402711
Alignment:
Q  268 gtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    |||||||||||||  ||||||   ||||| ||||||||||||||| || ||||||||||||    
T  26402651 gtgtctcggtgtccaacatgtatcgtgtccgacaccgacacttgtgattacactgaattat 26402711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 328
Target Start/End: Original strand, 27904031 - 27904067
Alignment:
Q  292 gtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  27904031 gtgtctgacaccgacatttgtaattacactgaattat 27904067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 241 - 328
Target Start/End: Original strand, 21190998 - 21191087
Alignment:
Q  241 atgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||||||||||||||| | ||||  |||||||| ||| ||| |||| ||| |||||| |||||||||||||||||| ||||||||||||    
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattat 21191087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 328
Target Start/End: Original strand, 21576685 - 21576776
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||||||||||||||||| | ||||  |||||||| | |||||||||| |||  ||||| |||| ||||||||||||| ||||||||||||    
T  21576685 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacacttgtaattacactgaattat 21576776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 328
Target Start/End: Complemental strand, 42893451 - 42893388
Alignment:
Q  265 ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||||||  |||||| |||| ||| ||||||||||||||||||||||||| |||||| |||||    
T  42893451 ggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgacacttgtaattacactggattat 42893388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 6247691 - 6247650
Alignment:
Q  287 gtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    |||| ||||| |||||||||||||||||| ||||||||||||    
T  6247691 gtgccgtgtccgacaccgacacttgtaattacactgaattat 6247650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 328
Target Start/End: Complemental strand, 15884052 - 15884016
Alignment:
Q  292 gtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  15884052 gtgtccgacaccgacacttgtaattacactgaattat 15884016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 328
Target Start/End: Original strand, 28588614 - 28588705
Alignment:
Q  239 ctatgaagcacggacactcgttggatg--gcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    |||||||||| |||||||| | ||||   |||||||  ||||||||| |||||  ||||| ||||||||||| | |||| ||||||||||||    
T  28588614 ctatgaagcatggacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgacacctataattacactgaattat 28588705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 238 - 328
Target Start/End: Original strand, 23292925 - 23293017
Alignment:
Q  238 actatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    |||||||||||||||||||| | ||||  |||||||| ||||||| |||| |||  ||||| |||||||||||||||||| | ||||||||||    
T  23292925 actatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattat 23293017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 328
Target Start/End: Original strand, 2361915 - 2362006
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    |||||||||||||||||||||  |||  || |||||||||||||||||| | |  ||||| ||||||||||||| |||| ||||| ||||||    
T  2361915 ctatgaagcacggacactcgtcagattaggtgtgtctcggtgtcagacacgagtcgtgtccgacaccgacacttttaattacactaaattat 2362006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 16073513 - 16073422
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    |||||||||| |||||||| | ||||  |||||||||  ||||| |||||||   ||||| |||||||||||||||||| ||||||||||||    
T  16073513 ctatgaagcatggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgacacttgtaattacactgaattat 16073422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 328
Target Start/End: Original strand, 12797310 - 12797369
Alignment:
Q  269 tgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    |||| |||||||||||||||   ||||| |||||||||||||||||| ||||||||||||    
T  12797310 tgtcccggtgtcagacatgtatcgtgtccgacaccgacacttgtaattacactgaattat 12797369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 30982808 - 30982878
Alignment:
Q  240 tatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacac 308  Q
    |||||||||||||||||| ||||||  |||||||| ||||||| |||| |||  |||||||||||||||||    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacac 30982878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 328
Target Start/End: Original strand, 28964186 - 28964279
Alignment:
Q  237 aactatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    |||||||||||| |||||||| | ||||  |||||||| | ||||| || |||||  ||||| ||||| |||||||||||| ||||||||||||    
T  28964186 aactatgaagcatggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagacacttgtaattacactgaattat 28964279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 267 - 328
Target Start/End: Complemental strand, 29205533 - 29205472
Alignment:
Q  267 cgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    |||||| ||||||| ||||||||  |||||  ||||||||||||||||| ||||||||||||    
T  29205533 cgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacacttgtaattacactgaattat 29205472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 321
Target Start/End: Original strand, 34306772 - 34306828
Alignment:
Q  265 ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacact 321  Q
    |||||||||||||||| |||| |||  ||||| |||||||||||||||||| |||||    
T  34306772 ggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacact 34306828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 265 - 328
Target Start/End: Complemental strand, 4157527 - 4157464
Alignment:
Q  265 ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||| |||||||||| ||||||||  ||||| ||||||||||||||||||  |||| ||||||    
T  4157527 ggcgtttctcggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattat 4157464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 265 - 328
Target Start/End: Complemental strand, 21945594 - 21945531
Alignment:
Q  265 ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    |||||||  ||||||| ||||||||   |||| |||||||||||||||||| ||||||||||||    
T  21945594 ggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgacacttgtaattacactgaattat 21945531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 297 - 332
Target Start/End: Original strand, 28000742 - 28000777
Alignment:
Q  297 tgacaccgacacttgtaatcacactgaattatatga 332  Q
    ||||||||||||||||||| ||||||||||||||||    
T  28000742 tgacaccgacacttgtaattacactgaattatatga 28000777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 328
Target Start/End: Complemental strand, 4157234 - 4157177
Alignment:
Q  271 tctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    |||||||||| ||||||||  ||||| ||||||||||||||||||  |||| ||||||    
T  4157234 tctcggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattat 4157177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 308
Target Start/End: Original strand, 23861369 - 23861440
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacac 308  Q
    |||||||||||| |||||| ||| ||  ||||||||| |||| ||||||||||  || ||||||||||||||    
T  23861369 ctatgaagcacgaacactctttgaattaggcgtgtcttggtgacagacatgtgtcgtatctgacaccgacac 23861440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 328
Target Start/End: Complemental strand, 42640593 - 42640557
Alignment:
Q  292 gtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  42640593 gtgtccgacaccgacacttgtaattacactgaattat 42640557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 49431145 - 49431054
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    |||| ||||| |||||||| | ||||  |||||||| ||||||  |||| |||  ||||| ||||||||||||| |||| ||||||||||||    
T  49431145 ctataaagcatggacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacacttttaattacactgaattat 49431054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 328
Target Start/End: Original strand, 45470 - 45561
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    |||||||||||| ||| || ||||||  ||| |||| |||||||||||| |||  ||||| |||||||||||||||||| ||||||||||||    
T  45470 ctatgaagcacgtacaatctttggattaggcatgtcgcggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattat 45561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 332
Target Start/End: Complemental strand, 8917 - 8822
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattatatga 332  Q
    |||||||||||||| |||| |  |||  |||||||||||||||| |||| |||  ||||| |||||||||||||||||| ||||| ||| ||||||    
T  8917 ctatgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaataatatga 8822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 31557115 - 31557024
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    |||||| ||| |||||| | ||||||  ||||||||  |||||| ||||||||  |||||||||||||| ||||||||| ||||||||||||    
T  31557115 ctatgaggcatggacacaccttggattaggcgtgtcctggtgtcggacatgtgtcgtgtctgacaccgaaacttgtaattacactgaattat 31557024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 238 - 308
Target Start/End: Original strand, 34450960 - 34451032
Alignment:
Q  238 actatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacac 308  Q
    |||||||||||||||||||| ||||||  |||||||| | |||||||||| |||  ||||| |||||||||||    
T  34450960 actatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 34451032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 328
Target Start/End: Original strand, 33405324 - 33405415
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||| ||||||||||||| ||||||  | ||||||  |||||||||||||||  ||||| ||||||||||| | |||| ||||| ||||||    
T  33405324 ctatggagcacggacactcattggattagccgtgtccaggtgtcagacatgtgtcgtgtccgacaccgacacatataattacactaaattat 33405415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 20679363 - 20679422
Alignment:
Q  265 ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaa 324  Q
    |||||||| ||||||| |||| ||| || ||||||||||||||||| |||| ||||||||    
T  20679363 ggcgtgtcccggtgtcggacacgtgttgcgtctgacaccgacacttataattacactgaa 20679422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 330
Target Start/End: Complemental strand, 22204705 - 22204667
Alignment:
Q  292 gtgtctgacaccgacacttgtaatcacactgaattatat 330  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  22204705 gtgtctgacactgacacttgtaattacactgaattatat 22204667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 308
Target Start/End: Original strand, 3951476 - 3951547
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacac 308  Q
    |||||||||||||| |||| ||||||  |||||||  | |||||||||| |||  |||||||||||||||||    
T  3951476 ctatgaagcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgacac 3951547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 328
Target Start/End: Complemental strand, 4948716 - 4948680
Alignment:
Q  292 gtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  4948716 gtgtccgacaccgacacttgtaattacactgaattat 4948680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 240 - 326
Target Start/End: Original strand, 403 - 491
Alignment:
Q  240 tatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaatt 326  Q
    |||||||||||||||||| | ||||  || ||||| ||||||| |||| | |  ||||| |||||||||||||||||| ||||||||||    
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacttgtaattacactgaatt 491  T

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Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 238 - 332
Target Start/End: Complemental strand, 90963 - 90867
Alignment:
Q  238 actatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattatatga 332  Q
    ||||||||||||  |||||| ||||||  ||||||| | |||||| |||| ||| ||||||||||| |||||  | |||| ||||||||||||||||    
T  90963 actatgaagcacatacactcattggattaggcgtgttttggtgtcggacacgtgttgtgtctgacatcgacatatataattacactgaattatatga 90867  T

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Target: scaffold0361 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 14646 - 14558
Alignment:
Q  239 ctatgaagcacggacactcgttggat--ggcgtgtctcggtgtcagacatgtgctgtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    |||||||||||| |||||| || |||  |||||||||||||||| |||| |||  ||||| ||||||   ||||||||| ||||||||||||    
T  14646 ctatgaagcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacacc---acttgtaattacactgaattat 14558  T

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Target: scaffold0049 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 328
Target Start/End: Complemental strand, 63837 - 63801
Alignment:
Q  292 gtgtctgacaccgacacttgtaatcacactgaattat 328  Q
    ||||||||||||||||||||||||  |||||||||||    
T  63837 gtgtctgacaccgacacttgtaattgcactgaattat 63801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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