View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16551_high_65 (Length: 237)
Name: NF16551_high_65
Description: NF16551
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16551_high_65 |
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Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 4596827 - 4596607
Alignment:
| Q |
1 |
aaaaacttgtagacacatgctatgctattctacattaggtagttgaataataaaatacaatgtatgacttgaacacagttattttaacacagttttaata |
100 |
Q |
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| T |
4596827 |
aaaaacttgtagacacatgctatgctaatctacattaggtagttgaataataaaatacaatgtatgacttgaacacagttattttaacacagttttaata |
4596728 |
T |
|
| Q |
101 |
tatgatggagaaggaaacaattttgagattacttgcaaaatggtcatgaagtagagcgaaaggtgcaatgggagcatgggtggccctgagcatggccggg |
200 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
4596727 |
tatgattgagaaggaaacaattttgagattacttgcaaaatggtcatgaagtagagcgaagggtgcaatgggagcatgggtggccctgagcatggccggg |
4596628 |
T |
|
| Q |
201 |
aggagcggccacccaagacac |
221 |
Q |
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| T |
4596627 |
aggagcggccacccaagacac |
4596607 |
T |
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