View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16551_high_66 (Length: 230)
Name: NF16551_high_66
Description: NF16551
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16551_high_66 |
 | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 3086760 - 3086546
Alignment:
| Q |
1 |
acccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtga |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||| || |
|
|
| T |
3086760 |
acccttcaattggtggattcttgactcattgtggatggaactcaacggttgaaagcgtacttgctggagtgccaatgttgtgttggccattttatggaga |
3086661 |
T |
|
| Q |
101 |
tcaaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaa |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3086660 |
tcaaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaa |
3086561 |
T |
|
| Q |
201 |
ttgatggtgggagat |
215 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
3086560 |
ttgatggtgggagat |
3086546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 118; Significance: 2e-60; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 24103339 - 24103126
Alignment:
| Q |
1 |
acccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtga |
100 |
Q |
| |
|
||||||| |||||||||||||||| |||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||| || | |||||| |
|
|
| T |
24103339 |
acccttcgattggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccattctttggtga |
24103240 |
T |
|
| Q |
101 |
tcaaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaa |
200 |
Q |
| |
|
|||||||| ||||||||||| ||| ||| || ||||||||||||| | ||||||||||| |||||||||||||| || ||||||||| | |||||||| |
|
|
| T |
24103239 |
tcaaccaacaaactgtagatttatttgctatgaatgggagattggactcgaaatcgatacaaatgtgaagagagatgacgtcgagaagttagtcaatgaa |
24103140 |
T |
|
| Q |
201 |
ttgatggtgggaga |
214 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
24103139 |
ttgatggtgggaga |
24103126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 27999891 - 28000104
Alignment:
| Q |
1 |
acccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtga |
100 |
Q |
| |
|
|||||||||| | || ||||||| ||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||| | |||| || ||| |
|
|
| T |
27999891 |
acccttcaatcagcgggttcttgactcactgcggatggaactcaaccaccgaaagcatatgcgctggagtgccaatgttgtgttggtcattttttgctga |
27999990 |
T |
|
| Q |
101 |
tcaaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaa |
200 |
Q |
| |
|
||| |||| ||||||||||| ||| || ||| |||| ||||||| || ||||| |||| |||||||||| |||||| | |||||||| ||||||||| |
|
|
| T |
27999991 |
tcagccaacaaactgtagatttatttgtaatgaatggaagattggtatggaaattgatatgaatgtgaagatagaggatttggagaagcttatcaatgaa |
28000090 |
T |
|
| Q |
201 |
ttgatggtgggaga |
214 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
28000091 |
ttgatggtgggaga |
28000104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 114; Significance: 6e-58; HSPs: 31)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 4579772 - 4579559
Alignment:
| Q |
1 |
acccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtga |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||| ||||||||||||| | |||||||||| ||||||||| ||||||||||||||||| |||| | ||| |
|
|
| T |
4579772 |
acccttcaattggtggattcttgactcattgcggatggaactcaatcactgaaagcatatctgctggagttccaatgttgtgttggccatttttcgctga |
4579673 |
T |
|
| Q |
101 |
tcaaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaa |
200 |
Q |
| |
|
||| ||| ||| ||| |||||| | ||||||| |||| | ||||||||||||||||| ||||||||||||||||||||||| ||||||||| | |||||| |
|
|
| T |
4579672 |
tcacccagtaagctgcagatatttatgcaatacatggaaaattggaattgaaatcgacactaatgtgaagagagaggaggtggagaagctggttaatgaa |
4579573 |
T |
|
| Q |
201 |
ttgatggtgggaga |
214 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
4579572 |
ttgatggtgggaga |
4579559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 215
Target Start/End: Complemental strand, 4571310 - 4571098
Alignment:
| Q |
3 |
ccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatc |
102 |
Q |
| |
|
|||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||| | ||||||| ||||||||||||| ||| |||| || ||||| |
|
|
| T |
4571310 |
ccttcaattggtggtttcttgactcactgtggatggaactcaacgaccgaaagcatatctactggagttccaatgttgtgttagccattttttgctgatc |
4571211 |
T |
|
| Q |
103 |
aaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaatt |
202 |
Q |
| |
|
| ||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| | ||||| ||||| || |||||||||| |
|
|
| T |
4571210 |
agccagcaaactgtagatatatctgcaatacatgggagattggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaatt |
4571111 |
T |
|
| Q |
203 |
gatggtgggagat |
215 |
Q |
| |
|
||||||||||||| |
|
|
| T |
4571110 |
gatggtgggagat |
4571098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 4266958 - 4267171
Alignment:
| Q |
1 |
acccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtga |
100 |
Q |
| |
|
||||||| |||||||||||||||| |||||| |||||||| |||||| |||||||||| ||||||||||||||||||||||||||| || | |||||| |
|
|
| T |
4266958 |
acccttcgattggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccattctttggtga |
4267057 |
T |
|
| Q |
101 |
tcaaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaa |
200 |
Q |
| |
|
||| |||| ||||||||||| ||| ||| || ||||||||||||| | |||||| |||| |||||||||||||| || ||||||||| | |||||||| |
|
|
| T |
4267058 |
tcagccaacaaactgtagatttatttgctatgaatgggagattggactcgaaatcaatacaaatgtgaagagagatgacgtcgagaagttagtcaatgaa |
4267157 |
T |
|
| Q |
201 |
ttgatggtgggaga |
214 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
4267158 |
ttgatggtgggaga |
4267171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 4585976 - 4585763
Alignment:
| Q |
1 |
acccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtga |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| || || ||| |
|
|
| T |
4585976 |
acccttcaattggtggattcttgactcactgtggatggaactcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccattcattgctga |
4585877 |
T |
|
| Q |
101 |
tcaaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaa |
200 |
Q |
| |
|
||| |||| |||||||||| ||| |||||| |||||||||||| || ||| | || || |||||||||||||||||||| |||||| || |||||||| |
|
|
| T |
4585876 |
tcagccaacaaactgtagaattatttgcaatgaatgggagattgggatggaagttgacaccaatgtgaagagagaggaggtggagaagttggtcaatgaa |
4585777 |
T |
|
| Q |
201 |
ttgatggtgggaga |
214 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
4585776 |
ttgatggtgggaga |
4585763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 4613510 - 4613723
Alignment:
| Q |
1 |
acccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtga |
100 |
Q |
| |
|
||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||| | || |
|
|
| T |
4613510 |
acccttcaattggcggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccatttttcgcgga |
4613609 |
T |
|
| Q |
101 |
tcaaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaa |
200 |
Q |
| |
|
||| ||| |||||| |||||||| |||||| |||||| ||||| || ||||| || || |||||||||||||| ||||| ||||||||| |||||||| |
|
|
| T |
4613610 |
tcagccagcaaactgcagatatatatgcaatgaatgggaaattgggatggaaattgacaccaatgtgaagagagatgaggtagagaagctggtcaatgaa |
4613709 |
T |
|
| Q |
201 |
ttgatggtgggaga |
214 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
4613710 |
ttgatggtgggaga |
4613723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 207
Target Start/End: Complemental strand, 4557463 - 4557259
Alignment:
| Q |
3 |
ccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatc |
102 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||| |||| || ||||| |
|
|
| T |
4557463 |
ccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttgctgatc |
4557364 |
T |
|
| Q |
103 |
aaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaatt |
202 |
Q |
| |
|
| ||| |||||| |||||||| ||||||| |||||||||||| || ||||| || || |||||||||||||| ||||| ||||| || |||||||||| |
|
|
| T |
4557363 |
agccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaatgaatt |
4557264 |
T |
|
| Q |
203 |
gatgg |
207 |
Q |
| |
|
||||| |
|
|
| T |
4557263 |
gatgg |
4557259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 4622482 - 4622268
Alignment:
| Q |
1 |
acccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtga |
100 |
Q |
| |
|
||||| |||||||||||||||||| ||||||||||||||| |||||| ||||||||| ||||||||| ||||| |||||||||| |||| | ||| |
|
|
| T |
4622482 |
accctgcaattggtggattcttgactcattgtggatggaattcaaccaccgaaagcatatgtgctggagtttcaatgctgtgttggccatttttcgctga |
4622383 |
T |
|
| Q |
101 |
tcaaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaa |
200 |
Q |
| |
|
||| |||| |||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||| ||| |||||||||||| |
|
|
| T |
4622382 |
tcagccaacaaactgtagatatatctgcaattcatgggagattggaatcgaaatcaatactaatgtgaaaagagaggaggtgtcgaatctgatcaatgaa |
4622283 |
T |
|
| Q |
201 |
ttgatggtgggagat |
215 |
Q |
| |
|
|||||| ||||||| |
|
|
| T |
4622282 |
ttgatgtcgggagat |
4622268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 4461463 - 4461250
Alignment:
| Q |
1 |
acccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtga |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| |||||||||||| |||||||||||||| || | |||||| |
|
|
| T |
4461463 |
acccttcaattggtggattcttgactcattgtggatggaattcaaccactgaaagcatatgtgctggagtgccgatgttgtgttggccattctttggtga |
4461364 |
T |
|
| Q |
101 |
tcaaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaa |
200 |
Q |
| |
|
||| ||| ||||||||||| ||| ||||| | ||||||||||||| |||||||||||| |||||||||| || ||||| |||||| || |||| ||| |
|
|
| T |
4461363 |
tcagccagcaaactgtagatttatttgcaacaaatgggagattggacttgaaatcgataaagatgtgaagagggatgaggtggagaagttggtcaacgaa |
4461264 |
T |
|
| Q |
201 |
ttgatggtgggaga |
214 |
Q |
| |
|
|||||||| ||||| |
|
|
| T |
4461263 |
ttgatggttggaga |
4461250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 4514913 - 4515126
Alignment:
| Q |
1 |
acccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtga |
100 |
Q |
| |
|
||||||||||||| |||||||||| |||||| ||||||||||||||| ||| |||||| ||||||||||||||| | ||||||| || | |||||| |
|
|
| T |
4514913 |
acccttcaattggcggattcttgactcattgcggatggaactcaaccactgagagcatatgcgctggagtgccaatgctttgttggcaattctttggtga |
4515012 |
T |
|
| Q |
101 |
tcaaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaa |
200 |
Q |
| |
|
|||||||| ||||||||||| ||| |||||| |||||||||||| || |||||||||| |||||||||||||||||||| || ||||| |||||||| |
|
|
| T |
4515013 |
tcaaccaacaaactgtagatttatttgcaatgaatgggagattgggatcgaaatcgatatgaatgtgaagagagaggaggttgaaaagcttgtcaatgaa |
4515112 |
T |
|
| Q |
201 |
ttgatggtgggaga |
214 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
4515113 |
ttgatggtgggaga |
4515126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 4592571 - 4592358
Alignment:
| Q |
1 |
acccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtga |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||| ||||||| | ||||||||||||||||| || | | |||| |
|
|
| T |
4592571 |
acccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggaattccaatgttgtgttggccattctttagtga |
4592472 |
T |
|
| Q |
101 |
tcaaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaa |
200 |
Q |
| |
|
||| |||| |||||||||| ||| | |||| |||||||||||| || ||||| ||||| ||||| |||||||||||||| ||||| || ||||||||| |
|
|
| T |
4592471 |
tcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattgatacgaatgtaaagagagaggaggtggagaaacttatcaatgaa |
4592372 |
T |
|
| Q |
201 |
ttgatggtgggaga |
214 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
4592371 |
ttgatggtgggaga |
4592358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 4602129 - 4601925
Alignment:
| Q |
1 |
acccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtga |
100 |
Q |
| |
|
||||||| || || |||||||||| |||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||| || || |
|
|
| T |
4602129 |
acccttcgatcggcggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgctggagtgccgatgttgtgttggcctttttttgccga |
4602030 |
T |
|
| Q |
101 |
tcaaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaa |
200 |
Q |
| |
|
||| |||| ||||||||||| ||| || ||| |||||||||||| || ||||||||||| |||||||||||||||||| | | |||||||||||||||| |
|
|
| T |
4602029 |
tcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcgatacaaatgtgaagagagaggagttggcgaagctgatcaatgaa |
4601930 |
T |
|
| Q |
201 |
ttgat |
205 |
Q |
| |
|
|||| |
|
|
| T |
4601929 |
gtgat |
4601925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 3 - 207
Target Start/End: Complemental strand, 4626289 - 4626085
Alignment:
| Q |
3 |
ccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatc |
102 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||||||||| ||||||||||| |||||||| |||||| |||||||||| || || ||||| |
|
|
| T |
4626289 |
ccttcaattggtggattcttaactcattgtggatggaactcaaccattgaaagcatatgcgctggagttccaatgctgtgttggccaaattttgctgatc |
4626190 |
T |
|
| Q |
103 |
aaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaatt |
202 |
Q |
| |
|
| |||| ||| ||||||||||| |||||| ||||||||||||||| ||||||||| ||||||||||||| |||| ||| ||||| |||||||||| ||| |
|
|
| T |
4626189 |
agccaacaaattgtagatatatttgcaatgaatgggagattggaatggaaatcgatgctaatgtgaagagggagggggtagagaaactgatcaatgcatt |
4626090 |
T |
|
| Q |
203 |
gatgg |
207 |
Q |
| |
|
||||| |
|
|
| T |
4626089 |
gatgg |
4626085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 4 - 206
Target Start/End: Original strand, 4256406 - 4256609
Alignment:
| Q |
4 |
cttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatca |
103 |
Q |
| |
|
||||| ||||||||||||||| |||||| ||||||||||||||| |||||||||| ||| ||||| ||||||||||||||||| |||| || |||||| |
|
|
| T |
4256406 |
cttcagttggtggattcttgactcattgaggatggaactcaaccattgaaagcatttgtgccggagttccaatgttgtgttggccattttttgctgatca |
4256505 |
T |
|
| Q |
104 |
-accaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaatt |
202 |
Q |
| |
|
||||| ||||||||||| ||| || | |||||||||||||||||||||| ||||||||||||||||||| ||||| ||||| |||||||||||||| |
|
|
| T |
4256506 |
gaccaacaaactgtagatttatttgtagcgaatgggagattggaattgaaatcaatactaatgtgaagagagatgaggtggagaatctgatcaatgaatt |
4256605 |
T |
|
| Q |
203 |
gatg |
206 |
Q |
| |
|
|||| |
|
|
| T |
4256606 |
gatg |
4256609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 4470143 - 4469930
Alignment:
| Q |
1 |
acccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtga |
100 |
Q |
| |
|
|||||||||| ||||||||||||| |||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||| || | |||||| |
|
|
| T |
4470143 |
acccttcaatcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgcgctggagtgccaatgttgtgttggccattctttggtga |
4470044 |
T |
|
| Q |
101 |
tcaaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaa |
200 |
Q |
| |
|
||| | | ||| ||||||| ||| |||||| ||||||||||||| |||||||||||| ||||||||||||| ||||| |||||||| |||||||| |
|
|
| T |
4470043 |
tcagctagcaaattgtagatttatttgcaatgaatgggagattggacttgaaatcgataaagatgtgaagagagatgaggtggagaagctagtcaatgaa |
4469944 |
T |
|
| Q |
201 |
ttgatggtgggaga |
214 |
Q |
| |
|
|||||||| ||||| |
|
|
| T |
4469943 |
ttgatggttggaga |
4469930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 4506197 - 4505984
Alignment:
| Q |
1 |
acccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtga |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||| ||||||||||||||| |||||||||| || | |||||| |
|
|
| T |
4506197 |
acccttcaattggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgcgctggagtgccaatgctgtgttggccgttctttggtga |
4506098 |
T |
|
| Q |
101 |
tcaaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaa |
200 |
Q |
| |
|
|||||||| ||||||||||| ||| |||||| || |||||||||||| ||||| |||||||||||||| ||||| | || ||||||||| || ||||| |
|
|
| T |
4506097 |
tcaaccaacaaactgtagatttatttgcaatgaattggagattggaatcgaaattgatactaatgtgaatagagaaaatgtagagaagctggtcgatgaa |
4505998 |
T |
|
| Q |
201 |
ttgatggtgggaga |
214 |
Q |
| |
|
| ||||| ||||| |
|
|
| T |
4505997 |
attatggttggaga |
4505984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 3 - 215
Target Start/End: Complemental strand, 4516659 - 4516447
Alignment:
| Q |
3 |
ccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatc |
102 |
Q |
| |
|
|||||| |||| |||||||||| |||||||||||||||||| || | |||||||| ||| ||||| |||||||||||||||||||||| || ||| | |
|
|
| T |
4516659 |
ccttcagttggaggattcttgactcattgtggatggaactccacaatggaaagcatctgtgccggagtaccaatgttgtgttggcctttttttgctgagc |
4516560 |
T |
|
| Q |
103 |
aaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaatt |
202 |
Q |
| |
|
| |||| ||| || |||||||| |||||| ||||||||||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4516559 |
agccaacaaattgcagatatatttgcaatgaatgggagattggagcagaaattgataccaatgtgaagagagaggaggtggagaagctgatcaatgaatt |
4516460 |
T |
|
| Q |
203 |
gatggtgggagat |
215 |
Q |
| |
|
|||||||||||| |
|
|
| T |
4516459 |
aatggtgggagat |
4516447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 4564051 - 4563846
Alignment:
| Q |
1 |
acccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtga |
100 |
Q |
| |
|
||||||||||||| |||||||||| |||||| ||||||||||||||| |||||||||| ||||||||| ||||||||||||||||| || | |||||| |
|
|
| T |
4564051 |
acccttcaattggcggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttgtgttggccattctttggtga |
4563952 |
T |
|
| Q |
101 |
tcaaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaa |
200 |
Q |
| |
|
||| |||| |||||||||| ||| | |||| |||||||||||| || ||||||||||| ||||| |||||||| ||||| ||||| || |||||||| |
|
|
| T |
4563951 |
tcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaatcgatacgaatgtaaagagagaagaggtggagaaacttgtcaatgaa |
4563852 |
T |
|
| Q |
201 |
ttgatg |
206 |
Q |
| |
|
|||||| |
|
|
| T |
4563851 |
ttgatg |
4563846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 4490147 - 4490360
Alignment:
| Q |
1 |
acccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtga |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||| | | || || ||| ||||||||||||||||||||||||||| |||| || ||| |
|
|
| T |
4490147 |
acccttcaattggtggattcttgactcattgtggatggaactcaatcatggagagtatatgtgctggagtgccaatgttgtgttggccattttttgctga |
4490246 |
T |
|
| Q |
101 |
tcaaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaa |
200 |
Q |
| |
|
||||||| | | | ||||| ||| ||| | |||||||||||| || |||| ||||| ||||| |||||||| ||||| ||||| |||||||||||| |
|
|
| T |
4490247 |
tcaaccacttagcagtagaattatttgcgaagaatgggagattgggatgaaaattgataccaatgtaaagagagaagaggtagagaaactgatcaatgaa |
4490346 |
T |
|
| Q |
201 |
ttgatggtgggaga |
214 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
4490347 |
ttgatggtgggaga |
4490360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 12 - 206
Target Start/End: Complemental strand, 4574637 - 4574443
Alignment:
| Q |
12 |
ggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataa |
111 |
Q |
| |
|
||||||||||||| |||||| ||||||||||||||| |||||||||| ||||||||| |||||||| |||||||| |||| | ||||| ||| || |
|
|
| T |
4574637 |
ggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggccatttttttcggatcagccagcaa |
4574538 |
T |
|
| Q |
112 |
actgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaattgatg |
206 |
Q |
| |
|
|||| |||||||| |||||| |||||||||||||| ||||||||||||||||| ||||| |||||||| ||||| ||| |||||||||||||| |
|
|
| T |
4574537 |
actgcagatatatttgcaatgaatgggagattggaaaggaaatcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatg |
4574443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 4457934 - 4457721
Alignment:
| Q |
1 |
acccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtga |
100 |
Q |
| |
|
|||||||||| || |||||||||| |||||||||||| ||||||||| |||||||||| ||||||||||||||| || ||||||| || | |||||| |
|
|
| T |
4457934 |
acccttcaatcggaggattcttgactcattgtggatgaaactcaaccactgaaagcatatgcgctggagtgccaatgctgcgttggccattctttggtga |
4457835 |
T |
|
| Q |
101 |
tcaaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaa |
200 |
Q |
| |
|
| | |||| || ||||||| ||| |||||| ||| |||||||| || ||||||||||| |||||||||||||| ||||| |||||| | |||||||| |
|
|
| T |
4457834 |
taagccaacaagttgtagatttatttgcaatgaatgagagattgggatggaaatcgatacaaatgtgaagagagatgaggtggagaagttagtcaatgaa |
4457735 |
T |
|
| Q |
201 |
ttgatggtgggaga |
214 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
4457734 |
ttgatggtgggaga |
4457721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 200
Target Start/End: Original strand, 4259949 - 4260145
Alignment:
| Q |
4 |
cttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatca |
103 |
Q |
| |
|
||||| ||||||||||||| | |||||| ||||||||||||||| |||||||||| ||| | ||| ||||||||||||||||| |||| || |||||| |
|
|
| T |
4259949 |
cttcagttggtggattcttaactcattgcggatggaactcaaccattgaaagcatttgtgccgaagttccaatgttgtgttggccattttttgctgatca |
4260048 |
T |
|
| Q |
104 |
accaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaa |
200 |
Q |
| |
|
|||| ||||||||||| ||| || || ||||||||||||||||||||| ||||||||||||| ||||| ||||| | |||||||||||||||| |
|
|
| T |
4260049 |
gccaacaaactgtagatttatttgtaacgaatgggagattggaattgaaattaatactaatgtgaaaagagatgaggtggcgaagctgatcaatgaa |
4260145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 215
Target Start/End: Complemental strand, 4598509 - 4598297
Alignment:
| Q |
3 |
ccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatc |
102 |
Q |
| |
|
|||||||||||||||||||| | |||||| ||||||||||||||| |||||| ||| ||| |||||||||||||||||||| || |||| | |||| |
|
|
| T |
4598509 |
ccttcaattggtggattcttaactcattgcggatggaactcaaccactgaaagtatatgtgccggagtgccaatgttgtgttgtccctttttcgcggatc |
4598410 |
T |
|
| Q |
103 |
aaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaatt |
202 |
Q |
| |
|
| | | ||||| |||||||| |||||| ||||||||||||||| |||| || ||||||||||||||||||||||| ||||||||| |||| ||||| |
|
|
| T |
4598409 |
agcaagccaactgcagatatatttgcaatgaatgggagattggaatcaaaattgaaactaatgtgaagagagaggaggtggagaagctggtcaacgaatt |
4598310 |
T |
|
| Q |
203 |
gatggtgggagat |
215 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
4598309 |
gatgtcgggagat |
4598297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 12 - 206
Target Start/End: Complemental strand, 4560835 - 4560641
Alignment:
| Q |
12 |
ggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataa |
111 |
Q |
| |
|
||||||||||||| |||||| ||||||||||||||| |||||||||| ||||||||| ||||||||||||||||| |||| || ||||| ||| || |
|
|
| T |
4560835 |
ggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttgtgttggccattttttgcagatcagccagcaa |
4560736 |
T |
|
| Q |
112 |
actgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaattgatg |
206 |
Q |
| |
|
|||| |||||||| |||||| |||| ||||||||| ||||| ||||| ||||| ||||| ||||| || ||||| ||| |||||||||||||| |
|
|
| T |
4560735 |
actgaagatatatttgcaatgaatggaagattggaaacgaaattgatacaaatgtaaagagggaggacgtggagaaactggtcaatgaattgatg |
4560641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 4617362 - 4617158
Alignment:
| Q |
1 |
acccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtga |
100 |
Q |
| |
|
|||||||||| || |||||||||| |||||| |||||||| |||||| |||||| ||| |||||||||||||||||||||||||| |||| || || |
|
|
| T |
4617362 |
acccttcaatcggaggattcttgactcattgcggatggaattcaaccactgaaagtatatgcgctggagtgccaatgttgtgttggccattttttgccga |
4617263 |
T |
|
| Q |
101 |
tcaaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaa |
200 |
Q |
| |
|
|| |||| | ||||||||| ||| || ||| |||||||||||| || ||||||||||| |||||||||||||||||| | | ||||||||||||||| |
|
|
| T |
4617262 |
ccagccaacagactgtagatttatttgtaatgaatgggagattggtatggaaatcgatacgaatgtgaagagagaggagttggcaaagctgatcaatgaa |
4617163 |
T |
|
| Q |
201 |
ttgat |
205 |
Q |
| |
|
|||| |
|
|
| T |
4617162 |
gtgat |
4617158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 4481033 - 4480820
Alignment:
| Q |
1 |
acccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtga |
100 |
Q |
| |
|
|||||||||| || |||||||||| |||||| ||||||||||||||| |||||| || ||||||||||||||||||||||||||| || | || || |
|
|
| T |
4481033 |
acccttcaatcggcggattcttgactcattgcggatggaactcaaccactgaaagtgtatgtgctggagtgccaatgttgtgttggccattctttgccga |
4480934 |
T |
|
| Q |
101 |
tcaaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaa |
200 |
Q |
| |
|
||| ||| ||| ||||| ||| |||||| ||||||||||||| | ||||||||||| |||||||||||||| || || |||| | | ||||||||| |
|
|
| T |
4480933 |
tcagccacctaaccgtagaattatttgcaatgaatgggagattggactcgaaatcgataccaatgtgaagagagaagatgtggagaggttaatcaatgaa |
4480834 |
T |
|
| Q |
201 |
ttgatggtgggaga |
214 |
Q |
| |
|
||| |||||||||| |
|
|
| T |
4480833 |
ttgttggtgggaga |
4480820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 4568396 - 4568185
Alignment:
| Q |
1 |
acccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtga |
100 |
Q |
| |
|
|||||||| |||| ||||||||| |||||||||||||||||| || | |||||||| ||| |||| |||||||| ||||||||||||| | ||| |
|
|
| T |
4568396 |
acccttcagttggacgattcttgactcattgtggatggaactccacattggaaagcatttgtgccagagtaccaatgttatgttggccttttttttctga |
4568297 |
T |
|
| Q |
101 |
tcaaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaa |
200 |
Q |
| |
|
|| |||| | |||| |||||||| || |||| | |||||| ||||| ||||| ||||| |||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
4568296 |
gcagccaacatactgcagatatatttgtaataagttggagatcggaatcgaaattgatacaaatgtgaagagagaggaggtggagaagctgatgaatgaa |
4568197 |
T |
|
| Q |
201 |
ttgatggtggga |
212 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
4568196 |
ttaatggtggga |
4568185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 214
Target Start/End: Complemental strand, 3172079 - 3171868
Alignment:
| Q |
3 |
ccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatc |
102 |
Q |
| |
|
||||||||||| |||||||||| ||| || ||||||||||||||| ||||| || ||||||| |||||||||||||| |||| |||| || ||||| |
|
|
| T |
3172079 |
ccttcaattggcggattcttgactcactgcggatggaactcaaccacggaaagtgtatgtgctggaatgccaatgttgtgtaggccattttttgctgatc |
3171980 |
T |
|
| Q |
103 |
aaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaatt |
202 |
Q |
| |
|
||||| ||| ||||| ||| ||| | |||| ||||||| || ||||| ||||| ||||| ||||||| |||||| ||||| |||||||| ||||| |
|
|
| T |
3171979 |
aaccacctaacagtagaattatttgccaagaatggaagattgggatggaaattgataccaatgtaaagagaggggaggtagagaaactgatcaacgaatt |
3171880 |
T |
|
| Q |
203 |
gatggtgggaga |
214 |
Q |
| |
|
|||||||||||| |
|
|
| T |
3171879 |
gatggtgggaga |
3171868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 132 - 214
Target Start/End: Original strand, 4299669 - 4299751
Alignment:
| Q |
132 |
atatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaattgatggtgggaga |
214 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||| |||||||||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
4299669 |
atatgggagattggaatcgaaatcgatacaaatgtgaggagagaggaggtggaaaagctgatcaatgaattgatggtgggaga |
4299751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 159
Target Start/End: Complemental strand, 4493287 - 4493137
Alignment:
| Q |
9 |
attggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaa |
108 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||| ||| |||| ||| |||||||||||||||||||||||||| | | ||||||| |||| |
|
|
| T |
4493287 |
attggtggattcttgactcattgtggatggaactcaactaccaaaaacatatgtgccggagtgccaatgttgtgttggcctttctttagtgatcagccaa |
4493188 |
T |
|
| Q |
109 |
taaactgtagatatatctgcaatatatgggagattggaattgaaatcgata |
159 |
Q |
| |
|
||||||||||| || |||||| || |||||||||| | |||||||||| |
|
|
| T |
4493187 |
caaactgtagattgatttgcaatgaattggagattggagtagaaatcgata |
4493137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 4504189 - 4504281
Alignment:
| Q |
1 |
acccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggccttttt |
93 |
Q |
| |
|
|||||||||| || |||||||||| |||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||| |||| |
|
|
| T |
4504189 |
acccttcaatcggaggattcttgactcattgtggatggaactcaaccactgaaagtgtttgtgctggagtgccaatgttgtgttggccatttt |
4504281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 4299613 - 4299671
Alignment:
| Q |
1 |
acccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcata |
59 |
Q |
| |
|
|||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||| |
|
|
| T |
4299613 |
acccttcaattggtggattcttgactcactgtggatggaactcaaccattgaaagcata |
4299671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 1281454 - 1281250
Alignment:
| Q |
1 |
acccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtga |
100 |
Q |
| |
|
|||||||||| ||||||||||||| |||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||| || ||| |
|
|
| T |
1281454 |
acccttcaatcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccattttttgctga |
1281355 |
T |
|
| Q |
101 |
tcaaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaa |
200 |
Q |
| |
|
||| |||| | ||||||||| ||| || ||| |||| ||||||| || ||||||||||| |||||||||||||||||||| | ||| ||||||||||| |
|
|
| T |
1281354 |
tcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagaggaggtggctaagttgatcaatgaa |
1281255 |
T |
|
| Q |
201 |
ttgat |
205 |
Q |
| |
|
||||| |
|
|
| T |
1281254 |
ttgat |
1281250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 3511 - 3724
Alignment:
| Q |
1 |
acccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtga |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| |||||||| |||||| | |||||||| || | |||||| |
|
|
| T |
3511 |
acccttcaattggtggattcttgactcattgtggatggaattcaaccactgaaagcatatgcgctggagtaccaatgctttgttggccattctttggtga |
3610 |
T |
|
| Q |
101 |
tcaaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaa |
200 |
Q |
| |
|
||| |||| ||||||||||| ||| ||||| ||||||||||||| |||||||||||| ||||||||||||| ||||| |||||||| |||||||| |
|
|
| T |
3611 |
tcagccaacaaactgtagatttatttgcaacgaatgggagattggacttgaaatcgatatggatgtgaagagagatgaggtggagaagctagtcaatgaa |
3710 |
T |
|
| Q |
201 |
ttgatggtgggaga |
214 |
Q |
| |
|
|||| ||||||||| |
|
|
| T |
3711 |
ttgacggtgggaga |
3724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 92; Significance: 8e-45; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 3 - 214
Target Start/End: Original strand, 16686061 - 16686272
Alignment:
| Q |
3 |
ccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatc |
102 |
Q |
| |
|
|||||||| ||||||||||| | |||||||||||||||||||||| |||||| ||| ||||||||| ||||||||||||||||| |||| || ||||| |
|
|
| T |
16686061 |
ccttcaatcggtggattcttaactcattgtggatggaactcaaccactgaaagtatatatgctggagttccaatgttgtgttggccattttttgctgatc |
16686160 |
T |
|
| Q |
103 |
aaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaatt |
202 |
Q |
| |
|
| ||| ||| || |||||||| |||||| |||||||||||| || ||||| || || |||||||||||||| ||||| ||||| || |||||||||| |
|
|
| T |
16686161 |
agccagcaaaatgcagatatatttgcaatgaatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtggagaaattggtcaatgaatt |
16686260 |
T |
|
| Q |
203 |
gatggtgggaga |
214 |
Q |
| |
|
|||||||||||| |
|
|
| T |
16686261 |
gatggtgggaga |
16686272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 3 - 214
Target Start/End: Original strand, 20863637 - 20863848
Alignment:
| Q |
3 |
ccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatc |
102 |
Q |
| |
|
||||||||||||||||| | | |||||||||||||||||||||| |||| |||||| ||||||||||||||||||||| ||||| |||| || ||||| |
|
|
| T |
20863637 |
ccttcaattggtggatttctaactcattgtggatggaactcaaccattgagagcatatgtgctggagtgccaatgttgtgctggccattttttgctgatc |
20863736 |
T |
|
| Q |
103 |
aaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaatt |
202 |
Q |
| |
|
| || | |||||| ||||| || ||||| | |||||||||||| || ||||| || || ||||| |||||||||||||| |||| |||| | |||||||| |
|
|
| T |
20863737 |
agccgacaaactgcagatacatttgcaacaaatgggagattgggatcgaaattgacaccaatgtcaagagagaggaggtggagatgctggtaaatgaatt |
20863836 |
T |
|
| Q |
203 |
gatggtgggaga |
214 |
Q |
| |
|
|||||||||||| |
|
|
| T |
20863837 |
gatggtgggaga |
20863848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 1674566 - 1674353
Alignment:
| Q |
1 |
acccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtga |
100 |
Q |
| |
|
|||||||||| || |||||||||| || || ||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||| || ||| |
|
|
| T |
1674566 |
acccttcaatcggcggattcttgacacactgcggatggaactcaaccactgaaagcatatgcgctggagtgccaatgttgtgttggccattttttgctga |
1674467 |
T |
|
| Q |
101 |
tcaaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaa |
200 |
Q |
| |
|
||| |||| ||||||||||| ||| || ||| |||| ||||||| || ||||| ||||| |||||||||||||||| | |||||||| ||||||||| |
|
|
| T |
1674466 |
tcagccaacaaactgtagatttatttgtaatgaatggaagattggtatggaaattgatacgaatgtgaagagagagggtttggagaagcttatcaatgaa |
1674367 |
T |
|
| Q |
201 |
ttgatggtgggaga |
214 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
1674366 |
ttgatggtgggaga |
1674353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 1965197 - 1965247
Alignment:
| Q |
5 |
ttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaag |
55 |
Q |
| |
|
||||||||| || ||||||||||| ||||| |||||||||||| ||||||| |
|
|
| T |
1965197 |
ttcaattggagggttcttgagtcactgtggttggaactcaacccttgaaag |
1965247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 1969140 - 1969186
Alignment:
| Q |
6 |
tcaattggtggattcttgagtcattgtggatggaactcaaccgttga |
52 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||||| |||||| |||| |
|
|
| T |
1969140 |
tcaattggtggattcttgactcattgtggctggaattcaacccttga |
1969186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 4478 - 4692
Alignment:
| Q |
1 |
acccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtga |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||| || ||||||||||||||||||||||| |||| | || |
|
|
| T |
4478 |
acccttcaattggtggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgtaggagtgccaatgttgtgttggccatttttcgccga |
4577 |
T |
|
| Q |
101 |
tcaaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaa |
200 |
Q |
| |
|
||| |||| ||||| | | ||||||| | |||||||||||| ||| || ||||| ||||||||||||||||||||| |||| ||| ||||||||||| |
|
|
| T |
4578 |
tcagccaacaaactatcggtatatctcccatatatgggagactggtatggaaattgatactaatgtgaagagagagaaggtaacgaatatgatcaatgaa |
4677 |
T |
|
| Q |
201 |
ttgatggtgggagat |
215 |
Q |
| |
|
|||||| ||||||| |
|
|
| T |
4678 |
ttgatgtcgggagat |
4692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 3485 - 3662
Alignment:
| Q |
10 |
ttggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaat |
109 |
Q |
| |
|
||||||||||||| | |||||||||||||||||||||| |||||||||| | ||||||| |||||| || ||||||| |||| || || ||| |
|
|
| T |
3485 |
ttggtggattcttaactcattgtggatggaactcaaccattgaaagcatttgttctggagttccaatgctgcgttggccatttttccccgaacactcaac |
3584 |
T |
|
| Q |
110 |
aaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaa |
187 |
Q |
| |
|
||||||||||| || || ||| |||||||||||||| |||||| ||| | |||||||||||||||||||| ||||| |
|
|
| T |
3585 |
aaactgtagatgcatttggaatgaatgggagattggaagtgaaatagattccaatgtgaagagagaggaggtggagaa |
3662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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