View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16552_high_11 (Length: 328)
Name: NF16552_high_11
Description: NF16552
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16552_high_11 |
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Alignment Details
Target: chr1 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 7 - 277
Target Start/End: Original strand, 28460515 - 28460800
Alignment:
| Q |
7 |
aaaagaaagatttgttggattcgttaaggggatgtaatgaaaaacaataatcgatagacttctaatatcttatattgatgtaaaagaat----atctata |
102 |
Q |
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| T |
28460515 |
aaaagaaagatttgttggattagttaaggggatgtaatgaaaaacaataatcgatagacttctaatatcttatattgatgtaaaagaatgaatatctata |
28460614 |
T |
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| Q |
103 |
atgtgaggtttttctccaaataagcatcatgtcaaataaaccgttaaacacttccactgtggttggtattaaaaaacagaactgctatttatcgtgaact |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |
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| T |
28460615 |
atgtgaggtttttctccaaataagcatcatgtcaaataaaccgttaaacacttccactgtggttggtattaaaaaacagaactgctatttgtcgttaact |
28460714 |
T |
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| Q |
203 |
atga-----------agtacggatatcaaatataacacgaatattgatatatcgatattgctaataatttgagaaaatcaaataat |
277 |
Q |
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| T |
28460715 |
atgagtacggatacgaatacggataccaaatacaacacggatattgatatatcgacattgttaataatttcagaaaatcaaataat |
28460800 |
T |
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