View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16552_low_24 (Length: 204)
Name: NF16552_low_24
Description: NF16552
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16552_low_24 |
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Alignment Details
Target: chr8 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 13 - 188
Target Start/End: Original strand, 11331432 - 11331607
Alignment:
| Q |
13 |
tcatcaccaaactctttcacaaccgccaaacgcttcaaatctccaacaagcacaccgggcttcttcacaaatccagtcgccttcttcgtcttcggattca |
112 |
Q |
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| T |
11331432 |
tcatcaccaaactctttcacaaccgccaaacgcttcaaatctccaacaagcacaccgggcttcttcacaaatccagtcgccttcttcgtcttcggattca |
11331531 |
T |
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| Q |
113 |
cctcaatctccgttcccaaaaccttatccccgccgaggtaatccttcacaaacgcatccaccatcaccgtcggatt |
188 |
Q |
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|||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
11331532 |
cctcgatctccgttcccaaaaccttatccccgccgagataatccttcacaaacgcatccaccatcaccgtcggatt |
11331607 |
T |
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