View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16554_high_87 (Length: 275)
Name: NF16554_high_87
Description: NF16554
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16554_high_87 |
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Alignment Details
Target: chr1 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 30191374 - 30191638
Alignment:
| Q |
1 |
ttgtcctcgtcgttcctctcatcatcgagatggatcgagaacagcagcttaacgatcttgaacttcagcaggctagtattcttggtactcctcccaattg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30191374 |
ttgtcctcgtcgttcctctcatcatcgagatggatcgagaacagcagcttaacgatcttgaacttcagcaggctagtattcttggtactcctcccaattg |
30191473 |
T |
|
| Q |
101 |
atcttcatcccgtttcttgatttaggttttggtgattgagaacagtgttgttctgtttctagggtttatgattgaaataattctatgattttgtgtattt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30191474 |
atcttcatcccgtttcttgatttaggttttggtgattgaaaacagtgttgttctgtttctagggtttatgattgaaataattctatgattttgtgtattt |
30191573 |
T |
|
| Q |
201 |
ttagacttagtttagtgcggaattgttgatttgatactataataatgatcttatgtgaatctgtg |
265 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30191574 |
ttagacttagtttagtgcggaattgttgatttgatactataataatgatcttatgtgaatctgtg |
30191638 |
T |
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