View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16554_low_100 (Length: 257)
Name: NF16554_low_100
Description: NF16554
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16554_low_100 |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 33885117 - 33885339
Alignment:
| Q |
19 |
atggattaacaattgtattagagtgttcaactcaataatatgttacaatgttttcctcatctttgatcttcttgatgctgttttatgtgttatctataga |
118 |
Q |
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| T |
33885117 |
atggattaacaattgtattagagtgttcaactcaataatatgttacattgttttcctcatctttgatcttcttgatgctgttttatgtgttatctataga |
33885216 |
T |
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| Q |
119 |
taccttgatgaacgcattgatggggtggcctcttcttgttgttgctctaaatgggagatacagaagaagatggtgatgaatgatgaagatgatggtgttt |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
33885217 |
taccttgatgaacgcattgatggggtggcctcttcttgttgttgctctaaatgggagagacagaagaagatggtgatgaatgatgaagatgatggtgttt |
33885316 |
T |
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| Q |
219 |
cagaaagtttgtatgagaggaag |
241 |
Q |
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||||||||||||||||||||||| |
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| T |
33885317 |
cagaaagtttgtatgagaggaag |
33885339 |
T |
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