View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16554_low_11 (Length: 614)

Name: NF16554_low_11
Description: NF16554
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16554_low_11
NF16554_low_11
[»] chr7 (54 HSPs)
chr7 (165-368)||(13750548-13750752)
chr7 (168-368)||(27072569-27072770)
chr7 (168-368)||(27205543-27205744)
chr7 (168-368)||(43113676-43113877)
chr7 (168-368)||(19217629-19217830)
chr7 (168-368)||(18788475-18788676)
chr7 (170-367)||(3537429-3537627)
chr7 (168-368)||(9391521-9391722)
chr7 (168-368)||(29186666-29186867)
chr7 (168-368)||(29187945-29188146)
chr7 (168-368)||(43962484-43962685)
chr7 (168-368)||(44417459-44417660)
chr7 (168-368)||(7011635-7011837)
chr7 (168-368)||(7026993-7027195)
chr7 (168-368)||(18787150-18787351)
chr7 (168-368)||(44420438-44420638)
chr7 (168-368)||(48793431-48793632)
chr7 (170-365)||(32519666-32519862)
chr7 (168-368)||(48792445-48792646)
chr7 (168-367)||(44746729-44746929)
chr7 (168-374)||(9392730-9392937)
chr7 (168-365)||(32518426-32518615)
chr7 (173-373)||(44230424-44230625)
chr7 (168-367)||(45399925-45400125)
chr7 (168-368)||(37237143-37237341)
chr7 (168-373)||(13597141-13597346)
chr7 (168-368)||(43960947-43961136)
chr7 (263-368)||(3538574-3538679)
chr7 (277-368)||(45688869-45688960)
chr7 (242-368)||(37235815-37235941)
chr7 (168-292)||(44748478-44748603)
chr7 (280-368)||(19016725-19016813)
chr7 (263-366)||(12630507-12630610)
chr7 (235-349)||(12630584-12630699)
chr7 (282-373)||(26006773-26006864)
chr7 (280-368)||(19008933-19009021)
chr7 (168-292)||(26005429-26005554)
chr7 (302-368)||(44231892-44231958)
chr7 (293-368)||(42611437-42611512)
chr7 (282-368)||(7057359-7057445)
chr7 (282-373)||(27071017-27071108)
chr7 (282-373)||(27207205-27207296)
chr7 (168-289)||(43115002-43115124)
chr7 (240-287)||(13599246-13599293)
chr7 (322-368)||(26005413-26005459)
chr7 (13-66)||(13750380-13750432)
chr7 (168-222)||(13599172-13599226)
chr7 (302-367)||(45398545-45398610)
chr7 (325-368)||(44748576-44748619)
chr7 (258-292)||(7057395-7057429)
chr7 (258-292)||(44231908-44231942)
chr7 (320-373)||(13749060-13749113)
chr7 (13-58)||(40739077-40739121)
chr7 (263-292)||(45688885-45688914)
[»] chr6 (19 HSPs)
chr6 (168-368)||(3000708-3000909)
chr6 (168-374)||(32348952-32349159)
chr6 (168-368)||(11801257-11801458)
chr6 (168-368)||(34996676-34996877)
chr6 (168-368)||(32347810-32348011)
chr6 (168-368)||(34995354-34995554)
chr6 (168-374)||(32713798-32714005)
chr6 (168-367)||(32712358-32712558)
chr6 (235-373)||(18572882-18573020)
chr6 (235-368)||(29479177-29479310)
chr6 (258-368)||(18574299-18574409)
chr6 (168-367)||(19383070-19383262)
chr6 (290-368)||(19788249-19788327)
chr6 (302-368)||(29477761-29477827)
chr6 (168-269)||(21094506-21094608)
chr6 (168-223)||(27719883-27719938)
chr6 (290-368)||(19761944-19762022)
chr6 (168-222)||(21095294-21095348)
chr6 (263-292)||(29477777-29477806)
[»] chr5 (25 HSPs)
chr5 (168-368)||(19228840-19229041)
chr5 (168-368)||(19229988-19230189)
chr5 (173-368)||(9083216-9083412)
chr5 (168-373)||(18654293-18654500)
chr5 (168-368)||(12372316-12372517)
chr5 (168-367)||(13278146-13278346)
chr5 (168-368)||(18655567-18655768)
chr5 (170-368)||(39350562-39350761)
chr5 (235-368)||(9081981-9082114)
chr5 (168-368)||(6803540-6803740)
chr5 (237-368)||(13276821-13276952)
chr5 (239-368)||(12373708-12373837)
chr5 (168-368)||(39349482-39349683)
chr5 (263-368)||(8447079-8447184)
chr5 (168-335)||(39164091-39164257)
chr5 (166-288)||(4031903-4032026)
chr5 (269-367)||(6801977-6802075)
chr5 (280-368)||(35952464-35952552)
chr5 (282-368)||(25001644-25001730)
chr5 (168-287)||(4032940-4033060)
chr5 (323-368)||(4031883-4031928)
chr5 (168-223)||(12373632-12373687)
chr5 (258-292)||(8447095-8447129)
chr5 (166-212)||(39051589-39051635)
chr5 (306-354)||(1010845-1010893)
[»] chr4 (35 HSPs)
chr4 (168-368)||(7261458-7261659)
chr4 (168-368)||(38031170-38031371)
chr4 (168-368)||(38032335-38032536)
chr4 (174-374)||(17356357-17356558)
chr4 (168-368)||(22621869-22622070)
chr4 (168-368)||(34095574-34095775)
chr4 (168-368)||(10802891-10803092)
chr4 (168-367)||(17357778-17357978)
chr4 (168-368)||(56234936-56235136)
chr4 (168-368)||(8814137-8814337)
chr4 (168-368)||(8815272-8815473)
chr4 (168-368)||(23757885-23758087)
chr4 (235-368)||(56233726-56233859)
chr4 (168-368)||(10804110-10804311)
chr4 (168-368)||(18091582-18091783)
chr4 (168-339)||(22623058-22623230)
chr4 (235-373)||(35193179-35193317)
chr4 (235-368)||(35191819-35191952)
chr4 (170-367)||(48499367-48499565)
chr4 (168-347)||(5433322-5433502)
chr4 (168-366)||(48501239-48501437)
chr4 (263-367)||(48081601-48081705)
chr4 (277-368)||(34122827-34122918)
chr4 (264-368)||(48080272-48080376)
chr4 (282-373)||(34121296-34121387)
chr4 (274-352)||(48081552-48081630)
chr4 (282-368)||(48463014-48463100)
chr4 (168-342)||(36074709-36074884)
chr4 (168-269)||(35927031-35927133)
chr4 (13-65)||(56234789-56234840)
chr4 (168-222)||(35925840-35925894)
chr4 (317-368)||(48081392-48081443)
chr4 (258-292)||(34122868-34122902)
chr4 (331-368)||(22624389-22624426)
chr4 (263-292)||(48463055-48463084)
[»] chr3 (67 HSPs)
chr3 (168-368)||(28777602-28777803)
chr3 (170-368)||(31938224-31938423)
chr3 (170-373)||(31937032-31937236)
chr3 (168-367)||(46902334-46902534)
chr3 (168-368)||(28776450-28776651)
chr3 (168-368)||(35759146-35759347)
chr3 (168-368)||(46903539-46903740)
chr3 (168-367)||(47431102-47431302)
chr3 (168-373)||(43393968-43394175)
chr3 (235-368)||(50881092-50881225)
chr3 (235-368)||(52525342-52525475)
chr3 (169-368)||(2233221-2233421)
chr3 (173-368)||(54353025-54353221)
chr3 (168-368)||(2232604-2232805)
chr3 (168-357)||(21729103-21729293)
chr3 (168-368)||(21727912-21728113)
chr3 (168-368)||(37609323-37609524)
chr3 (168-368)||(53180719-53180919)
chr3 (172-367)||(5691014-5691209)
chr3 (170-368)||(54354308-54354507)
chr3 (172-360)||(17742211-17742401)
chr3 (172-360)||(19043531-19043721)
chr3 (168-373)||(23073289-23073495)
chr3 (168-368)||(11346814-11347015)
chr3 (168-368)||(17116204-17116404)
chr3 (168-367)||(52521930-52522129)
chr3 (235-368)||(53765949-53766082)
chr3 (238-367)||(55209785-55209914)
chr3 (235-367)||(53764432-53764563)
chr3 (239-368)||(23091193-23091322)
chr3 (237-368)||(53178703-53178834)
chr3 (258-366)||(43392630-43392738)
chr3 (237-368)||(10979160-10979291)
chr3 (238-373)||(46986077-46986211)
chr3 (168-368)||(5689727-5689922)
chr3 (171-368)||(11348390-11348587)
chr3 (168-368)||(47429629-47429825)
chr3 (239-367)||(15290476-15290604)
chr3 (238-373)||(17117387-17117520)
chr3 (258-367)||(23072063-23072171)
chr3 (168-311)||(17740889-17741033)
chr3 (168-311)||(19042209-19042353)
chr3 (240-368)||(33113306-33113426)
chr3 (168-348)||(47917528-47917708)
chr3 (168-287)||(37610678-37610798)
chr3 (282-374)||(34014504-34014596)
chr3 (270-351)||(50879513-50879594)
chr3 (168-292)||(35758082-35758207)
chr3 (282-368)||(34015798-34015884)
chr3 (170-282)||(10978093-10978206)
chr3 (282-373)||(24376458-24376549)
chr3 (282-365)||(27750461-27750544)
chr3 (306-368)||(53101827-53101889)
chr3 (170-275)||(50879782-50879888)
chr3 (168-289)||(55210823-55210945)
chr3 (277-368)||(27749108-27749199)
chr3 (311-357)||(21729380-21729426)
chr3 (323-367)||(37610797-37610841)
chr3 (168-221)||(15290405-15290458)
chr3 (170-223)||(53764898-53764951)
chr3 (322-374)||(35758060-35758112)
chr3 (258-292)||(21729387-21729421)
chr3 (258-292)||(34014526-34014560)
chr3 (262-292)||(37610796-37610826)
chr3 (322-368)||(53101545-53101590)
chr3 (258-291)||(50879513-50879546)
chr3 (168-221)||(55209931-55209984)
[»] chr1 (31 HSPs)
chr1 (168-374)||(7110222-7110429)
chr1 (168-368)||(51693149-51693350)
chr1 (170-368)||(52086629-52086826)
chr1 (170-368)||(5488503-5488702)
chr1 (168-354)||(7111390-7111577)
chr1 (168-368)||(51468341-51468542)
chr1 (170-364)||(50484913-50485108)
chr1 (168-368)||(5488782-5488983)
chr1 (168-367)||(45229518-45229718)
chr1 (173-368)||(18819264-18819460)
chr1 (168-373)||(51468816-51469022)
chr1 (168-368)||(17244177-17244378)
chr1 (168-368)||(52759365-52759566)
chr1 (168-354)||(38235065-38235251)
chr1 (173-368)||(40187605-40187800)
chr1 (168-360)||(1821918-1822112)
chr1 (172-374)||(1823215-1823414)
chr1 (238-373)||(17245651-17245785)
chr1 (168-353)||(52087689-52087875)
chr1 (275-368)||(25181503-25181596)
chr1 (239-366)||(47532961-47533088)
chr1 (235-368)||(50483513-50483645)
chr1 (235-362)||(45228283-45228410)
chr1 (168-289)||(52761511-52761633)
chr1 (168-371)||(47533769-47533973)
chr1 (302-373)||(18820806-18820877)
chr1 (168-223)||(21203159-21203214)
chr1 (258-292)||(25181519-25181553)
chr1 (322-368)||(52761606-52761652)
chr1 (263-292)||(18820827-18820856)
chr1 (20-60)||(45228698-45228737)
[»] scaffold0141 (2 HSPs)
scaffold0141 (170-368)||(35202-35401)
scaffold0141 (170-368)||(31035-31234)
[»] scaffold0049 (2 HSPs)
scaffold0049 (170-368)||(79411-79610)
scaffold0049 (170-368)||(83578-83777)
[»] chr2 (19 HSPs)
chr2 (168-368)||(16602727-16602928)
chr2 (239-368)||(38243942-38244071)
chr2 (168-368)||(27892251-27892452)
chr2 (173-368)||(23832970-23833165)
chr2 (237-373)||(26388215-26388351)
chr2 (240-368)||(27891108-27891236)
chr2 (280-368)||(23833898-23833986)
chr2 (258-368)||(16604195-16604305)
chr2 (263-368)||(43814523-43814628)
chr2 (282-368)||(5033480-5033566)
chr2 (239-309)||(38242944-38243014)
chr2 (285-368)||(19577359-19577442)
chr2 (282-368)||(5034846-5034932)
chr2 (282-332)||(15496083-15496133)
chr2 (307-367)||(43814636-43814696)
chr2 (307-352)||(43814599-43814644)
chr2 (13-66)||(27948846-27948903)
chr2 (263-292)||(23833941-23833970)
chr2 (168-217)||(27891260-27891309)
[»] scaffold0878 (2 HSPs)
scaffold0878 (168-368)||(2941-3143)
scaffold0878 (168-292)||(1847-1971)
[»] chr8 (24 HSPs)
chr8 (168-368)||(9244067-9244268)
chr8 (239-368)||(43584410-43584539)
chr8 (168-368)||(522012-522213)
chr8 (168-368)||(26364743-26364944)
chr8 (168-368)||(9245346-9245548)
chr8 (168-374)||(34642661-34642867)
chr8 (168-367)||(30644620-30644819)
chr8 (235-368)||(41638135-41638268)
chr8 (168-368)||(20308925-20309126)
chr8 (168-368)||(21095558-21095759)
chr8 (168-368)||(41636833-41637034)
chr8 (168-367)||(30640801-30641000)
chr8 (235-368)||(34643943-34644075)
chr8 (168-368)||(26366109-26366310)
chr8 (237-352)||(20310037-20310152)
chr8 (237-352)||(21096670-21096785)
chr8 (238-367)||(43585930-43586059)
chr8 (268-368)||(31202968-31203068)
chr8 (282-368)||(3714550-3714636)
chr8 (282-368)||(43134079-43134165)
chr8 (282-368)||(3713065-3713149)
chr8 (13-60)||(26365844-26365890)
chr8 (302-368)||(22012159-22012225)
chr8 (168-217)||(43585860-43585909)
[»] scaffold1425 (2 HSPs)
scaffold1425 (237-368)||(1586-1717)
scaffold1425 (170-368)||(136-335)
[»] scaffold0018 (2 HSPs)
scaffold0018 (239-368)||(25332-25461)
scaffold0018 (168-222)||(25259-25313)
[»] scaffold0026 (3 HSPs)
scaffold0026 (264-368)||(104303-104407)
scaffold0026 (168-218)||(104404-104454)
scaffold0026 (258-292)||(104319-104353)
[»] scaffold0349 (1 HSPs)
scaffold0349 (168-223)||(9305-9360)


Alignment Details
Target: chr7 (Bit Score: 148; Significance: 8e-78; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 165 - 368
Target Start/End: Original strand, 13750548 - 13750752
Alignment:
Q  165 tatataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggacta 263  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||| ||||       ||||||||||||||||||||||||||| |    
T  13750548 tatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacggtctgtttttttaggggattaaaattatcaaaattggacca 13750647  T
Q  264 aattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaa 363  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||    
T  13750648 aattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgtgatcaaattgaataaaagaaataagttaagggaccggcagatcaa 13750747  T
Q  364 ttaag 368  Q
    |||||    
T  13750748 ttaag 13750752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 27072569 - 27072770
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| ||||| |||||||||||| ||||||||  ||||| ||||| | |        || |||||||||||||||||||| ||| ||||    
T  27072569 ataaattaggtgttggtgataaactataaaatcttatagacctctgtaatccaacggtttttttttttagtggattaaaattatcaaaatttgaccaaat 27072668  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27072669 tgaataaaagaaataagttaagggacatgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 27072768  T
Q  367 ag 368  Q
    ||    
T  27072769 ag 27072770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 27205744 - 27205543
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| ||||| |||||||||||| ||||||||  ||||| ||||| | |        || |||||||||||||||||||| ||| ||||    
T  27205744 ataaattaggtgttggtgatagactataaaatcttatagacctctgtaatccaacggtttttttttttagtggattaaaattatcaaaatttgaccaaat 27205645  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27205644 tgaataaaagaaataagttaagggacatgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 27205545  T
Q  367 ag 368  Q
    ||    
T  27205544 ag 27205543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 43113877 - 43113676
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    |||||||||||| || |||||||||||||||||| ||||||||  ||||| ||||| |||        ||||||||||||||||||||||||||| ||||    
T  43113877 ataaattaggtgctggtgatacactataaaatctgatagacctctgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaccaaat 43113778  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||| |||||||||||||||||||||||    
T  43113777 tgaataaaagaaataagttaagggacgtgtttgagaaagttaaaacttatgagaccaaattgaataaaagaaataagttaagggaccgacagatcaatta 43113678  T
Q  367 ag 368  Q
    ||    
T  43113677 ag 43113676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 19217830 - 19217629
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||||||||||||||||  |||||||| |||||| ||||| |||        |||| ||||||||||||||||||| || ||||    
T  19217830 ataaattaggtgttggtgatacactataaaatccgatagacctccgtaatccaacggtctctttttttagggtattaaaattatcaaaattgtaccaaat 19217731  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||    
T  19217730 tgaataaaagaaataagttaatggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaatta 19217631  T
Q  367 ag 368  Q
    ||    
T  19217630 ag 19217629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 18788475 - 18788676
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| ||||||| |||||||||| ||||||||||||||| ||||| |||        || |||||||||||||||||||||||| ||||    
T  18788475 ataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaacggtctatttttttagaggattaaaattatcaaaattggaccaaat 18788574  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||| ||| || |||||||||||||||||||||||||||||| || ||||||||    
T  18788575 tgaataaaagaaataagttaagggacatgtttgagaaagttaagatttataggaccatattgaataaaagaaataaattaagggaccggcatatcaatta 18788674  T
Q  367 ag 368  Q
    ||    
T  18788675 ag 18788676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 170 - 367
Target Start/End: Complemental strand, 3537627 - 3537429
Alignment:
Q  170 aaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaattg 268  Q
    |||||||||| || ||||| |||||||||| | ||||||||||||||| ||||| | |        |||||||||||||||| |||||| ||||||||||    
T  3537627 aaattaggtgatggtgatatactataaaattttatagaccttcgtaatccaacggtttctttttttaggggattaaaattattaaaattagactaaattg 3537528  T
Q  269 aataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaa 367  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  3537527 aataaaagaaataagttaagggacgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaa 3537429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 9391722 - 9391521
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||| |||        |  ||||||||||||||||||||| || ||||    
T  9391722 ataaatttggtgttgatgatacactataaaatctgatagaccttcgtaatccaacggtctctttttttaaaggattaaaattatcaaaattgtaccaaat 9391623  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||||||| ||||||||||||||||||| |||||| |||| ||| ||||||||||||||||||||| ||||||||||| |||||||||||    
T  9391622 tgaataaaagaaataagtgaagggacgtgtttgagaaaattaagatttataggaccaaattgaataaaagaaataagttaagggaccggcagatcaatta 9391523  T
Q  367 ag 368  Q
    ||    
T  9391522 ag 9391521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 29186867 - 29186666
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||||||||||||||||| |||||||| |||||| | ||| |||        | |||||||||||||||||||||| || ||||    
T  29186867 ataaattaggtgttggtgatacactataaaatctgatagacctccgtaatcctacggtctcattttttaagggattaaaattatcaaaattgaaccaaat 29186768  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||  |||||||||||    
T  29186767 tgaataaaataaataagttaagggacgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccagcagatcaatta 29186668  T
Q  367 ag 368  Q
    ||    
T  29186667 ag 29186666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 29187945 - 29188146
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||| ||||||||||||| ||||||||  | ||| ||||| |||        ||||||||||||||||||||||||||||||||    
T  29187945 ataaattaggtgttggtgatgcactataaaatctgatagacctctgcaatccaacggtctctttttttaggggattaaaattatcaaaattggactaaat 29188044  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| ||||||| |||    
T  29188045 tgaataaaataaataaattaagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaaaggaccggcagatcattta 29188144  T
Q  367 ag 368  Q
    ||    
T  29188145 ag 29188146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 43962484 - 43962685
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||  ||||| |||||||||||| ||||||||||||||| ||||| ||||       ||  ||||||||||||||||||||||  ||||    
T  43962484 ataaattaggtgttagtgatatactataaaatctgatagaccttcgtaatccaacggtctgtttttttagatgattaaaattatcaaaattggatcaaat 43962583  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||| || ||||||||||||||||||||| ||||||||||| |||||||||||    
T  43962584 tgaataaaagaaataagttaagggacatgtttgagaaagctaagacttatgtgaccaaattgaataaaagaaataagttaagggaccggcagatcaatta 43962683  T
Q  367 ag 368  Q
    ||    
T  43962684 ag 43962685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 44417660 - 44417459
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| ||||| |||||||||||| |||||||| |||||| ||||  |||        ||||||||||||||||||||||||||| ||||    
T  44417660 ataaattaggtgttggtgatagactataaaatctgatagacctccgtaatccaacaatctctttttttaggggattaaaattatcaaaattggaccaaat 44417561  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||| ||||||||||| |||||||||||    
T  44417560 tgaagaaaataaataagttaagggacgtgtttgagaatgttaagacttatggaaccaaattgaataaaagaaataagttaagggaccggcagatcaatta 44417461  T
Q  367 ag 368  Q
    ||    
T  44417460 ag 44417459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 7011837 - 7011635
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnn-aggggattaaaattatcaaaattggactaaa 265  Q
    ||||||||||||||| |||||||||||||||||| |||||||| |||||| ||||| |||         |  |||||||||||||||||||||||| |||    
T  7011837 ataaattaggtgttggtgatacactataaaatcttatagacctccgtaatccaacggtcttttttttttaatggattaaaattatcaaaattggaccaaa 7011738  T
Q  266 ttgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatt 365  Q
    |||||||||||||||||| |||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||    
T  7011737 ttgaataaaagaaataagctaagggacatgtttgataaagttaagacttatgagatcaaattgaataaaagaaataagttaagggactgacagatcaatt 7011638  T
Q  366 aag 368  Q
    |||    
T  7011637 aag 7011635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 7027195 - 7026993
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnn-aggggattaaaattatcaaaattggactaaa 265  Q
    ||||||||||||||| |||||||||||||||||| |||||||| |||||| ||||| |||         |  |||||||||||||||||||||||| |||    
T  7027195 ataaattaggtgttggtgatacactataaaatcttatagacctccgtaatccaacggtcttttttttttaatggattaaaattatcaaaattggaccaaa 7027096  T
Q  266 ttgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatt 365  Q
    |||||||||||||||||| |||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||    
T  7027095 ttgaataaaagaaataagctaagggacatgtttgataaagttaagacttatgagatcaaattgaataaaagaaataagttaagggactgacagatcaatt 7026996  T
Q  366 aag 368  Q
    |||    
T  7026995 aag 7026993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 18787351 - 18787150
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    |||||||| |||||| |||||||| ||||||||| ||| |||| |||||| ||||| |||        ||||||||||||||||||||||||||| ||||    
T  18787351 ataaattaagtgttggtgatacaccataaaatctgataaacctccgtaatccaacggtctatttttttaggggattaaaattatcaaaattggaccaaat 18787252  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||||||||||||||| | ||||| |||||||||| |||||||| |||||| || |||||||||||||||||||||||||||||||||||    
T  18787251 tgaataaaagaaataagttaagggacatatttgaaaaagttaagatttatgggaccaaattaaacaaaagaaataaattaagggaccgacagatcaatta 18787152  T
Q  367 ag 368  Q
    ||    
T  18787151 ag 18787150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 44420438 - 44420638
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||| ||||| |||||||||||||| ||| ||||||||||||||| ||||| | |        |||| |||||||||||||||||||||||||||    
T  44420438 ataaattagatgttggtgatacactataaa-tctgatagaccttcgtaatccaacggtatctttttttagggcattaaaattatcaaaattggactaaat 44420536  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||| ||| || || ||||||||    
T  44420537 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaaaggatcggcatatcaatta 44420636  T
Q  367 ag 368  Q
    ||    
T  44420637 ag 44420638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 48793431 - 48793632
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||| ||||||| |||||||||||||||||| ||| ||||| ||||| ||||| |||        ||| ||||||||||||||||||||||  ||||    
T  48793431 ataaatttggtgttggtgatacactataaaatcttatacacctttgtaatccaacggtctctttttttaggagattaaaattatcaaaattggatcaaat 48793530  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||| ||||||||||| || ||||||||    
T  48793531 tgaataaaagaaataagttaagggacgtgtttgaaaaagttaagacttatgggaccaaaatgaataaaagaaataagttaagggaccggcaaatcaatta 48793630  T
Q  367 ag 368  Q
    ||    
T  48793631 ag 48793632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 170 - 365
Target Start/End: Original strand, 32519666 - 32519862
Alignment:
Q  170 aaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaattg 268  Q
    ||||||||||||| ||| |||||||| |||||  |||||||||||||||||||| |||        | |||||||||||||| ||||||| || ||||||    
T  32519666 aaattaggtgttggtgacacactatacaatctggtagaccttcgtaattcaacggtctctttttttaagggattaaaattattaaaattgaaccaaattg 32519765  T
Q  269 aataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatt 365  Q
    |||||||||||||| |||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  32519766 aataaaagaaataatttaagggatgtgtttgagaaagttaagatttatgggaccaaattgaataaaagaaataaattaagggaccggcagatcaatt 32519862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 48792646 - 48792445
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||| ||||||| |||||||||||||||||| ||| ||| | ||||| ||||| |||        ||| ||||||||||||||||||| ||  ||||    
T  48792646 ataaatttggtgttggtgatacactataaaatcttatacacccttgtaatccaacggtctctttttttaggagattaaaattatcaaaattagatcaaat 48792547  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||||||||||||||| ||||||| |||||||| |||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||    
T  48792546 tgaataaaagaaataagttaagggacatgtttgaaaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaatta 48792447  T
Q  367 ag 368  Q
    ||    
T  48792446 ag 48792445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 168 - 367
Target Start/End: Complemental strand, 44746929 - 44746729
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||||| |||||||||||||| | |||||||| |||||| ||||| |||        | ||||||||||||||||||||| ||| ||||    
T  44746929 ataaattaggtgttgataatacactataaaatatgatagacctccgtaatccaacggtctctttttctaagggattaaaattatcaaaatttgaccaaat 44746830  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||||||||||||||||||| | || ||||||||||| |||||||||||  ||||||||||||||||| |||||| ||||| |||||||||||||||||    
T  44746829 tgaataaaagaaataagttaacgaacatgtttgagaaaattaagacttataagatcaaattgaataaaaaaaataagttaagagaccgacagatcaatta 44746730  T
Q  367 a 367  Q
    |    
T  44746729 a 44746729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 168 - 374
Target Start/End: Original strand, 9392730 - 9392937
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||  | |||||||||||||||||| ||||||||  ||||| ||||| |||        ||||||||||||||||||||||||||| ||||    
T  9392730 ataaattaggtgccggtgatacactataaaatctgatagacctctgtaatccaacggtctctttttctaggggattaaaattatcaaaattggaccaaat 9392829  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||  ||||| |||||||||||||| |||| ||| ||  ||||||||||    
T  9392830 tgaataaaagaaataagttaagggacatgtttgagaaagttaagacttataggaataaattaaataaaagaaataagttaaaggaacggaagatcaatta 9392929  T
Q  367 agacttta 374  Q
    || |||||    
T  9392930 agccttta 9392937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 168 - 365
Target Start/End: Complemental strand, 32518615 - 32518426
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||||||||||||||||| |||||||| |||||| ||||| |||        ||||||||||||||         | || ||||    
T  32518615 ataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctttttttttaggggattaaaatt---------gaaccaaat 32518525  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatt 365  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  32518524 tgaataaaagaaataatttaagggacgtgtttgagaaagttaagatttatgggaccaaattgaataaaagaaataaattaagggaccgatagatcaatt 32518426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 173 - 373
Target Start/End: Complemental strand, 44230625 - 44230424
Alignment:
Q  173 ttaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaattgaat 271  Q
    |||||||||||||||||||| |||||||| ||||||||  ||||| ||||| |||        |||||||| ||||||| |||||||||| |||||||||    
T  44230625 ttaggtgttgatgatacactgtaaaatctgatagacctctgtaatccaacggtctcttttcgtaggggattgaaattattaaaattggaccaaattgaat 44230526  T
Q  272 aaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaagact 371  Q
    |||||||||||||||| ||||||| ||||||||||||| |||||||| |  ||||||||||||||||||||  ||||||| || ||||||||||||| ||    
T  44230525 aaaagaaataagttaaaggacgtgattgagaaagttaaaacttatggaactaaattgaataaaagaaataatctaagggatcggcagatcaattaagcct 44230426  T
Q  372 tt 373  Q
    ||    
T  44230425 tt 44230424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 168 - 367
Target Start/End: Original strand, 45399925 - 45400125
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||  |||||||||||||||||| ||||||||||||||| ||||| |||        ||||||||||||||||||||||||||| |||     
T  45399925 ataaattaggtgttagtgatacactataaaatctgatagaccttcgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaccaaag 45400024  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    | |||||||||||||||||||||||||||||||  |||||||||| ||||| || |||||  ||  ||| |||||| ||||||||||| |||||||||||    
T  45400025 taaataaaagaaataagttaagggacgtgtttgcaaaagttaagagttatgagaccaaatcaaaataaacaaataagttaagggaccggcagatcaatta 45400124  T
Q  367 a 367  Q
    |    
T  45400125 a 45400125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 37237143 - 37237341
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| | |||||||||||||||| |||||||| |||||| ||||| |||        || |||||||| ||||||||||||||| ||||    
T  37237143 ataaattaggtgttggtcatacactataaaatctgatagacctccgtaatccaacgatctctttttttagaggattaaa-ttatcaaaattggaccaaat 37237241  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    | |||||||  |||||||||||||| |||||||||| |||||||||||||| || |||||| |||||||||||||||||||||||| | |||||||||||    
T  37237242 ttaataaaa--aataagttaagggatgtgtttgagagagttaagacttatgagaccaaattaaataaaagaaataaattaagggacgggcagatcaatta 37237339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 168 - 373
Target Start/End: Complemental strand, 13597346 - 13597141
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||||||||||||||||| |||||||| | |||| ||||| | |        || |||||||||||||||||||||  | ||||    
T  13597346 ataaattaggtgttggtgatacactataaaatcttatagacctccctaatccaacgatatctttttttagaggattaaaattatcaaaattgatc-aaat 13597248  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    | ||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||  |||| ||| || ||| |||||||    
T  13597247 ttaataaaagaaataagttcagggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaatacgttaaaggatcggcagttcaatta 13597148  T
Q  367 agacttt 373  Q
    || ||||    
T  13597147 agccttt 13597141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 43961136 - 43960947
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||  |||||||||||||||||| ||||||||| ||||| ||||| ||||       || |||||||||||||||||||||||  ||||    
T  43961136 ataaattaggtgttagtgatacactataaaatctgatagacctttgtaatccaacggtctgtttttgtagaggattaaaattatcaaaattggatcaaat 43961037  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||||| |||||||||||||||||||| |   ||||         ||||||||||||||||||||| |||||||||||||||||||||||    
T  43961036 tgaataaaagaaataaattaagggacgtgtttgagaacg---agac---------caaattgaataaaagaaataagttaagggaccgacagatcaatta 43960949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 263 - 368
Target Start/End: Original strand, 3538574 - 3538679
Alignment:
Q  263 aaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatca 362  Q
    |||||||||||||||||||||| ||  |||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||| | |||||    
T  3538574 aaattgaataaaagaaataagtgaaaagacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcggatca 3538673  T
Q  363 attaag 368  Q
    ||||||    
T  3538674 attaag 3538679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 277 - 368
Target Start/End: Complemental strand, 45688960 - 45688869
Alignment:
Q  277 aaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||| |||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||    
T  45688960 aaatgagttaagggatgtgtttgagaaagttaagacttatgtgaccaaattgaataaaagaaataagttaagggaccgacagatcaattaag 45688869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 242 - 368
Target Start/End: Complemental strand, 37235941 - 37235815
Alignment:
Q  242 taaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaata 341  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||  || |||||| | |||||| |||||||||||||    
T  37235941 taaaattctcaaaattggaccaaattgaatcaaagaaataagttaagggacgcgtttgagaaagttgggatttatggaaccaaattaaataaaagaaata 37235842  T
Q  342 aattaagggaccgacagatcaattaag 368  Q
    | ||||||||||| |||  ||||||||    
T  37235841 agttaagggaccggcaggccaattaag 37235815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 168 - 292
Target Start/End: Original strand, 44748478 - 44748603
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaac-gtctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||| |||| ||||        ||||||||||||||||||||||||||| | ||    
T  44748478 ataaattaggtgttggtgatacactataaaatctgatagaccttcgtaatccaacagtctccttttctaggggattaaaattatcaaaattggaccatat 44748577  T
Q  267 tgaataaaagaaataagttaagggac 292  Q
    |||||||||||||||| |||||||||    
T  44748578 tgaataaaagaaataaattaagggac 44748603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 280 - 368
Target Start/End: Original strand, 19016725 - 19016813
Alignment:
Q  280 taagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||||||||||||||| |||| ||| |||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  19016725 taagttaagggacgtggttgacaaatttaatacttatgggaccaaattgaaaaaaagaaataaattaagggaccgacagatcaattaag 19016813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 263 - 366
Target Start/End: Complemental strand, 12630610 - 12630507
Alignment:
Q  263 aaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatca 362  Q
    |||||||| |||||| ||||||||||| || |||||||||||||||||||||||| || |||||||||||||||| |||| |||| ||||||||| ||||    
T  12630610 aaattgaagaaaagacataagttaaggaacatgtttgagaaagttaagacttatgagaccaaattgaataaaagacataagttaaaggaccgacatatca 12630511  T
Q  363 atta 366  Q
    ||||    
T  12630510 atta 12630507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 235 - 349
Target Start/End: Complemental strand, 12630699 - 12630584
Alignment:
Q  235 aggggattaaaattatcaaaattggactaaattgaataaaagaaataag-ttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataa 333  Q
    ||||||||||||||||||||||| ||| ||||||||||||| ||| ||| ||||||||||||||||||||| ||||||||| || || ||||||||| ||    
T  12630699 aggggattaaaattatcaaaattagaccaaattgaataaaaaaaaaaaggttaagggacgtgtttgagaaaattaagacttttgagaccaaattgaagaa 12630600  T
Q  334 aagaaataaattaagg 349  Q
    |||| |||| ||||||    
T  12630599 aagacataagttaagg 12630584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 282 - 373
Target Start/End: Original strand, 26006773 - 26006864
Alignment:
Q  282 agttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaagacttt 373  Q
    |||||||||| ||||||| || |||||| |||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||| ||||    
T  26006773 agttaagggatgtgtttgtgatagttaaaacttatgggaccaaattgaacaaaagaaataagttaagggaccgacagatcaattaagccttt 26006864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 280 - 368
Target Start/End: Complemental strand, 19009021 - 19008933
Alignment:
Q  280 taagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||||||||||||| | |||| ||| |||| |||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  19009021 taagttaagggacgcgattgacaaatttaatacttatgggaccaaattgaaaaaaagaaataagttaagggaccgacagatcaattaag 19008933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 168 - 292
Target Start/End: Complemental strand, 26005554 - 26005429
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    |||||||| |||||| |||||||||||||||||| ||||||||| ||||| ||||| |||        || ||| ||||||||||||||||| || ||||    
T  26005554 ataaattacgtgttggtgatacactataaaatcttatagacctttgtaatccaacggtctctttttttagtggagtaaaattatcaaaattgaaccaaat 26005455  T
Q  267 tgaataaaagaaataagttaagggac 292  Q
    ||||||||||||||||||||||||||    
T  26005454 tgaataaaagaaataagttaagggac 26005429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 302 - 368
Target Start/End: Original strand, 44231892 - 44231958
Alignment:
Q  302 aaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  44231892 aaagttaagatttatgggaccaaattgaataaaagaaataagttaagggaccgacagatcaattaag 44231958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 293 - 368
Target Start/End: Complemental strand, 42611512 - 42611437
Alignment:
Q  293 gtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    ||||||||||||||||| |||||||| | ||||||||||||||||||||| |||| |||||| |||||||||||||    
T  42611512 gtgtttgagaaagttaaaacttatggaaccaaattgaataaaagaaataagttaaaggaccggcagatcaattaag 42611437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 282 - 368
Target Start/End: Original strand, 7057359 - 7057445
Alignment:
Q  282 agttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||| ||||| ||||||| ||  ||||| |||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||    
T  7057359 agttgagggatgtgtttgtgacggttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaag 7057445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 282 - 373
Target Start/End: Complemental strand, 27071108 - 27071017
Alignment:
Q  282 agttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaagacttt 373  Q
    |||||||||| ||||||| ||  ||||| |||||||||| ||||||||||||||||||||| ||||  ||||| ||||||||||||| ||||    
T  27071108 agttaagggatgtgtttgtgactgttaaaacttatgggaccaaattgaataaaagaaataagttaaatgaccggcagatcaattaagccttt 27071017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 282 - 373
Target Start/End: Original strand, 27207205 - 27207296
Alignment:
Q  282 agttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaagacttt 373  Q
    |||||||||| ||||||| ||  ||||| |||||||||| ||||||||||||||||||||| ||||  ||||| ||||||||||||| ||||    
T  27207205 agttaagggatgtgtttgtgactgttaaaacttatgggaccaaattgaataaaagaaataagttaaatgaccggcagatcaattaagccttt 27207296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 168 - 289
Target Start/End: Original strand, 43115002 - 43115124
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    |||||||||||  ||||||| ||||||||||||| |||||| |  ||||| ||||| |||        | ||||||||||||||||||||||||  ||||    
T  43115002 ataaattaggttatgatgatgcactataaaatctgatagacttcagtaatccaacggtcttcttttttaagggattaaaattatcaaaattggatcaaat 43115101  T
Q  267 tgaataaaagaaataagttaagg 289  Q
    |||||||||||||||||||||||    
T  43115102 tgaataaaagaaataagttaagg 43115124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 287
Target Start/End: Original strand, 13599246 - 13599293
Alignment:
Q  240 attaaaattatcaaaattggactaaattgaataaaagaaataagttaa 287  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||    
T  13599246 attaaaattatcaaaattggagcaaattgaataaaagaaataagttaa 13599293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 322 - 368
Target Start/End: Complemental strand, 26005459 - 26005413
Alignment:
Q  322 caaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||    
T  26005459 caaattgaataaaagaaataagttaagggaccggcagatcaattaag 26005413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 13750380 - 13750432
Alignment:
Q  13 gagagaagaagacatgaagattagggttttaaaaagcataatttgatgaagatg 66  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||||||||||||    
T  13750380 gagagaagaagacatgaatattggggtttt-aaaagcataatttgatgaagatg 13750432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 13599172 - 13599226
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaac 222  Q
    ||||||||||||||  |||||||||||||||||| |||||||| |||||| ||||    
T  13599172 ataaattaggtgttactgatacactataaaatctgatagacctccgtaatccaac 13599226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 302 - 367
Target Start/End: Complemental strand, 45398610 - 45398545
Alignment:
Q  302 aaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaa 367  Q
    ||||||||||  ||||||| ||||| |||  |||||| ||| ||||||||||||||||||||||||    
T  45398610 aaagttaagagctatgggaccaaatcgaaataaagaagtaagttaagggaccgacagatcaattaa 45398545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 368
Target Start/End: Original strand, 44748576 - 44748619
Alignment:
Q  325 attgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||||||||||||||||||||||||||| | |||||| ||||||    
T  44748576 attgaataaaagaaataaattaagggactggcagatcgattaag 44748619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 292
Target Start/End: Original strand, 7057395 - 7057429
Alignment:
Q  258 ggactaaattgaataaaagaaataagttaagggac 292  Q
    |||| ||||||||||||||||||||||||||||||    
T  7057395 ggaccaaattgaataaaagaaataagttaagggac 7057429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 292
Target Start/End: Original strand, 44231908 - 44231942
Alignment:
Q  258 ggactaaattgaataaaagaaataagttaagggac 292  Q
    |||| ||||||||||||||||||||||||||||||    
T  44231908 ggaccaaattgaataaaagaaataagttaagggac 44231942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 373
Target Start/End: Complemental strand, 13749113 - 13749060
Alignment:
Q  320 atcaaattgaataaaagaaataaattaagggaccgacagatcaattaagacttt 373  Q
    |||||||| |||| ||||||||| ||| ||||||| ||||||||||||| ||||    
T  13749113 atcaaattaaatataagaaataagttatgggaccgccagatcaattaagccttt 13749060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 40739121 - 40739077
Alignment:
Q  13 gagagaagaagacatgaagattagggttttaaaaagcataatttga 58  Q
    |||||||||||||||||||||| ||||||| |||| ||||||||||    
T  40739121 gagagaagaagacatgaagatt-gggtttttaaaaacataatttga 40739077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 292
Target Start/End: Complemental strand, 45688914 - 45688885
Alignment:
Q  263 aaattgaataaaagaaataagttaagggac 292  Q
    ||||||||||||||||||||||||||||||    
T  45688914 aaattgaataaaagaaataagttaagggac 45688885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 137; Significance: 3e-71; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 3000708 - 3000909
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||  |||||||||||||||||| ||||||||||||||| ||||| ||||       ||||||||||||||||||||||||||||||||    
T  3000708 ataaattaggtgttagtgatacactataaaatctgatagaccttcgtaatccaacgatctgtgtttttaggggattaaaattatcaaaattggactaaat 3000807  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||| ||||||||    
T  3000808 tgaataaaagaaataagttaagggaggtgtttgagaaagttaagatttatgggaccaaattgaataaaagaaataagttaagggaccgacaaatcaatta 3000907  T
Q  367 ag 368  Q
    ||    
T  3000908 ag 3000909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 168 - 374
Target Start/End: Original strand, 32348952 - 32349159
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||| ||||| |||        ||||||||||||||||||||||||||| ||||    
T  32348952 ataaattaggtgttgatgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaccaaat 32349051  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||| |||||||||||    
T  32349052 tgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttataagaccaaattgaataaaagaaataaattaagggaccggcagatcaatta 32349151  T
Q  367 agacttta 374  Q
    || |||||    
T  32349152 agccttta 32349159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 11801257 - 11801458
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    |||||||||||||| ||||||||||||||||| | |||||||| |||||| ||||| |||        ||||||||||||||||||||||||||| ||||    
T  11801257 ataaattaggtgttaatgatacactataaaatttgatagacctccgtaatccaacggtctcttttttgaggggattaaaattatcaaaattggaccaaat 11801356  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  11801357 tgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataaattaagggaccggcagatcaatta 11801456  T
Q  367 ag 368  Q
    ||    
T  11801457 ag 11801458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 34996676 - 34996877
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||| ||||       ||| ||||||||||||||||||||||| ||||    
T  34996676 ataaattaggtgttggtgatacactataaaatctgatagaccttcgtaatccaacggtctgtttttttaggagattaaaattatcaaaattggaccaaat 34996775  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||| || ||||||||||| ||||||||    
T  34996776 tgaataaaagaaataagttaagggacgtatttgagaaagttaagacttatgggactaaattgaataaaagaaataagttcagggaccgacaaatcaatta 34996875  T
Q  367 ag 368  Q
    ||    
T  34996876 ag 34996877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 32348011 - 32347810
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacgt-ctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    |||||||||||||||||||||||||||||||||| |||||||  |||||| |||||| ||        ||||||||||||||||||||||||||| ||||    
T  32348011 ataaattaggtgttgatgatacactataaaatctgatagacccccgtaatccaacgttctctttttttaggggattaaaattatcaaaattggaccaaat 32347912  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||| |||  |||||||||||    
T  32347911 tgaataaaagaaatcacttaagggacgtgtttgagaaagttaagacttatatgaccaaattgaataaaagaaataaattaaggaaccagcagatcaatta 32347812  T
Q  367 ag 368  Q
    ||    
T  32347811 ag 32347810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 34995554 - 34995354
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||| ||||| |||||||||||||||||| |||||||||||||||  |||| ||||       |||||||||||||||| |||||||||| ||||    
T  34995554 ataaattagatgttggtgatacactataaaatctgatagaccttcgtaatctaacggtctgtttttttaggggattaaaattattaaaattggaccaaat 34995455  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||| || ||||||||||||||||||||| |||| ||||||||||||||||||    
T  34995454 tgaataaaagaaataagttaaag-acgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaaaggaccgacagatcaatta 34995356  T
Q  367 ag 368  Q
    ||    
T  34995355 ag 34995354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 168 - 374
Target Start/End: Original strand, 32713798 - 32714005
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| ||||||||| |||||||| |||||||| |||||| ||||| ||         ||||||||||||||||||||||||||| ||||    
T  32713798 ataaattaggtgttggtgatacactgtaaaatcttatagacctccgtaatccaacggtcactttttttaggggattaaaattatcaaaattggaccaaat 32713897  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||| |||||||||||||||| |||  |||||  |||||||||||    
T  32713898 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagatttatggaaccaaactgaataaaagaaataagttacaggaccagcagatcaatta 32713997  T
Q  367 agacttta 374  Q
    || |||||    
T  32713998 agccttta 32714005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 168 - 367
Target Start/End: Complemental strand, 32712558 - 32712358
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    |||| |||||||||| || ||||||||||||| | |||||||| |||||| ||||| |||        ||||||||||||||||||||||||||| ||||    
T  32712558 ataagttaggtgttggtggtacactataaaatttgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaccaaat 32712459  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||||||||||| ||||| |||||||||  ||||| |||| ||| |||| |||||||||||||||| |||||||||||||||||||||||    
T  32712458 tgaataaaagaaataagttaagagacgtatttgagaaatgtaagatttataggaccaaactgaataaaagaaataagttaagggaccgacagatcaatta 32712359  T
Q  367 a 367  Q
    |    
T  32712358 a 32712358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 235 - 373
Target Start/End: Complemental strand, 18573020 - 18572882
Alignment:
Q  235 aggggattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaa 334  Q
    ||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||    
T  18573020 aggggattaaaattatcaaaattggcccaatttgaataaaagaaataagttaagggacgtttttaagaaagttaagacttatgggaccaaattgaataaa 18572921  T
Q  335 agaaataaattaagggaccgacagatcaattaagacttt 373  Q
    |||||||| |||| |||||| ||||||||||||| ||||    
T  18572920 agaaataagttaacggaccggcagatcaattaagccttt 18572882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 235 - 368
Target Start/End: Original strand, 29479177 - 29479310
Alignment:
Q  235 aggggattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaa 334  Q
    |||||||| ||||||| |||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||| || ||||||||||    
T  29479177 aggggattgaaattattaaaattggaccaaattgaataaaagaaataagttaaaggacgtgattgagaaagttaaaacttatgggaccagattgaataaa 29479276  T
Q  335 agaaataaattaagggaccgacagatcaattaag 368  Q
    |||||||| |||||||| || |||||||||||||    
T  29479277 agaaataatttaagggatcggcagatcaattaag 29479310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 258 - 368
Target Start/End: Original strand, 18574299 - 18574409
Alignment:
Q  258 ggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgaca 357  Q
    |||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| | ||||||||||||||||||||| | ||||||||| ||    
T  18574299 ggaccaaattgaataaaagaaataagttcagggacgtgcttgagaaagttaagacttatggaaccaaattgaataaaagaaataagtcaagggaccggca 18574398  T
Q  358 gatcaattaag 368  Q
    |||||||||||    
T  18574399 gatcaattaag 18574409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 168 - 367
Target Start/End: Original strand, 19383070 - 19383262
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||| ||||| |||||||||||||||||| ||||||| ||||||| ||||| |||        |||| |||||||||||||||||| ||  ||||    
T  19383070 ataaattagatgttg-tgatacactataaaatctgatagaccatcgtaatccaacggtct--ctttttagggcattaaaattatcaaaattagatcaaat 19383166  T
Q  267 tgaataaaagaaa--taagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaat 364  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| ||||||||||| | |||||||    
T  19383167 tgaataaaaaaaaaataagttaagggacgtgtttgagaaagttaagacttat-------aattgaataaaagaaataagttaagggaccggcggatcaat 19383259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 290 - 368
Target Start/End: Complemental strand, 19788327 - 19788249
Alignment:
Q  290 gacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||||||||  ||||||||| ||||||| ||||||||||||||||||||| || |||||||| |||||||| |||||||    
T  19788327 gacgtgtttatgaaagttaaaacttatgagatcaaattgaataaaagaaacaagttaagggatcgacagatgaattaag 19788249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 302 - 368
Target Start/End: Complemental strand, 29477827 - 29477761
Alignment:
Q  302 aaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||||||||| ||||| || ||||||||||||||||||||| ||||||||||| |||||||||||||    
T  29477827 aaagttaagatttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaag 29477761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 269
Target Start/End: Complemental strand, 21094608 - 21094506
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaac-gtctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| ||||||||||||||||||| ||||||| |||||| |||| ||||        ||||||||||| ||||||||||||||  ||||    
T  21094608 ataaattaggtgttggtgatacactataaaatctagtagacctccgtaatccaacggtctctttttttaggggattaaagttatcaaaattggatcaaat 21094509  T
Q  267 tga 269  Q
    |||    
T  21094508 tga 21094506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 27719938 - 27719883
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg 223  Q
    ||||||||||||||| |||||||||||||||||| |||||||| |||||| |||||    
T  27719938 ataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacg 27719883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 290 - 368
Target Start/End: Complemental strand, 19762022 - 19761944
Alignment:
Q  290 gacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||||||||  |||| |||| ||||||  ||||||||||||||||||||| || |||||||| |||||||| |||||||    
T  19762022 gacgtgtttatgaaaattaaaacttataagatcaaattgaataaaagaaacaagttaagggatcgacagatgaattaag 19761944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 21095294 - 21095348
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaac 222  Q
    ||||||||||||||| ||||||||||||||||||  ||||||| |||||| ||||    
T  21095294 ataaattaggtgttggtgatacactataaaatctggtagacctccgtaatccaac 21095348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 292
Target Start/End: Complemental strand, 29477806 - 29477777
Alignment:
Q  263 aaattgaataaaagaaataagttaagggac 292  Q
    ||||||||||||||||||||||||||||||    
T  29477806 aaattgaataaaagaaataagttaagggac 29477777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 137; Significance: 3e-71; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 19229041 - 19228840
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||        ||||||||||||||||||||||||||| ||||    
T  19229041 ataaattaggtgttgatgatacactataaaatctaatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaccaaat 19228942  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  19228941 tgaataaaagaaatcagttaaggaacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataaattaagggaccggcagatcaatta 19228842  T
Q  367 ag 368  Q
    ||    
T  19228841 ag 19228840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 19229988 - 19230189
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    |||||||| ||||||||||||||||||||||| | |||||||| |||||| ||||| |||        ||||||||||||||||||||||||||| ||||    
T  19229988 ataaattaagtgttgatgatacactataaaatttgatagacctccgtaatccaacggtctcttttttgaggggattaaaattatcaaaattggaccaaat 19230087  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| || |||||||||||    
T  19230088 tgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataaattaagggatcggcagatcaatta 19230187  T
Q  367 ag 368  Q
    ||    
T  19230188 ag 19230189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 173 - 368
Target Start/End: Original strand, 9083216 - 9083412
Alignment:
Q  173 ttaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaattgaat 271  Q
    |||||||||| |||||||||||||||||| ||||||||||||||| ||||| |||        ||||||||||||||||||||||||||| |||||||||    
T  9083216 ttaggtgttggtgatacactataaaatcttatagaccttcgtaatccaacggtctccttttttaggggattaaaattatcaaaattggaccaaattgaat 9083315  T
Q  272 aaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||  |||| |||||||||||||    
T  9083316 aaaataaaaaagttaagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaatgaattaagaaaccggcagatcaattaag 9083412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 168 - 373
Target Start/End: Complemental strand, 18654500 - 18654293
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| ||||||||| |||||||| |||||||| |||||| ||||| |||        | ||||||||||| ||||||||||||| ||||    
T  18654500 ataaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctcttttttaatgggattaaaatgatcaaaattggaccaaat 18654401  T
Q  267 tg-aataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatt 365  Q
    |  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  18654400 tttaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataaattaagggaccggcagatcaatt 18654301  T
Q  366 aagacttt 373  Q
    ||| ||||    
T  18654300 aagccttt 18654293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 12372517 - 12372316
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||| | ||       |||| |||||||||||||||||||||  ||||    
T  12372517 ataaattaggtgttggtgatacactataaaatctgatagaccttcgtaatccaacggtatgtttttttagggtattaaaattatcaaaattggatcaaat 12372418  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||| || |||||||||||||| |||||| ||||||||||| |||||||||||    
T  12372417 tgaataaaacaaataagttaagagacgtgtttgagaaagttaagacttatgagaccaaattgaataaaacaaataagttaagggaccggcagatcaatta 12372318  T
Q  367 ag 368  Q
    ||    
T  12372317 ag 12372316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 168 - 367
Target Start/End: Original strand, 13278146 - 13278346
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||||||||||||||||| |||||||| | |||| ||||| |||        | ||||||||||||||||||||||||  ||||    
T  13278146 ataaattaggtgttggtgatacactataaaatctgatagacctccctaatccaacggtctctttttctatgggattaaaattatcaaaattggatcaaat 13278245  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||  ||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||    
T  13278246 tgaagtaaaaaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaaaaaataaattaagggaccgacagatcaatta 13278345  T
Q  367 a 367  Q
    |    
T  13278346 a 13278346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 18655567 - 18655768
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||  ||||| ||||||||  |||||||| |||||| |||||||||||||| |||        |||||||||||||||||||| |||||| ||||    
T  18655567 ataaattaattgttggtgatacaccgtaaaatctgatagactttcgtaattcaacggtctctttttttaggggattaaaattatcaaagttggaccaaat 18655666  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||| |||| |||||||||||    
T  18655667 tgaataaaagaaataaattaagggacgtgtttgagaaagttaagacttatgtgaccaaattgaataaaagaaataagttaaggaaccggcagatcaatta 18655766  T
Q  367 ag 368  Q
    ||    
T  18655767 ag 18655768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 170 - 368
Target Start/End: Original strand, 39350562 - 39350761
Alignment:
Q  170 aaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaattg 268  Q
    ||||||||||||| ||||||||| |||||||| |||||||| |||||| ||||| |||        || ||||||||||||| |||||||||| |||||     
T  39350562 aaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctctttttttagaggattaaaattataaaaattggaccaaatta 39350661  T
Q  269 aataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||| || ||||||||||    
T  39350662 agtaaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggactaaattgaataaaagaaataagttaagggaccggcatatcaattaag 39350761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 235 - 368
Target Start/End: Complemental strand, 9082114 - 9081981
Alignment:
Q  235 aggggattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaa 334  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  9082114 aggggattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatggaatcaaattgaataaa 9082015  T
Q  335 agaaataaattaagggaccgacagatcaattaag 368  Q
    |||||| | |||||| ||||  ||||||||||||    
T  9082014 agaaatgagttaaggaaccggtagatcaattaag 9081981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 6803540 - 6803740
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||| ||||| |||||||||||||||||| |||||| || |||||  |||| ||||       |  |||||||||||||||||||||||| ||||    
T  6803540 ataaattagatgttggtgatacactataaaatctgatagacttt-gtaatctaacggtctgtttttttaaaggattaaaattatcaaaattggaccaaat 6803638  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||||||||||||||||||||  || ||||||||||| |||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||    
T  6803639 tgaataaaagaaataagttaagaaacatgtttgagaaaattaagacttatgtgaccaaattaaataaaagaaataaattaagggaccgacagatcaatta 6803738  T
Q  367 ag 368  Q
    ||    
T  6803739 ag 6803740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 237 - 368
Target Start/End: Complemental strand, 13276952 - 13276821
Alignment:
Q  237 gggattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaag 336  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||| |||||||||||||||    
T  13276952 gggattaaaattatcaaaatttgaccaaattgaataaaagaaataagttaagggacgtgtttgagaaaattaagatttataggaccaaattgaataaaag 13276853  T
Q  337 aaataaattaagggaccgacagatcaattaag 368  Q
    |||||| ||||||||||| |||||||||||||    
T  13276852 aaataagttaagggaccggcagatcaattaag 13276821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 239 - 368
Target Start/End: Original strand, 12373708 - 12373837
Alignment:
Q  239 gattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaa 338  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  12373708 gattaaaattatcaaaattggaccaaattgaataaaataaataagttaagggacgtgtttgagaaagttaagacttatgggactaaattgaataaaagaa 12373807  T
Q  339 ataaattaagggaccgacagatcaattaag 368  Q
    |||| |||| |||||| | |||||||||||    
T  12373808 ataagttaaaggaccggcggatcaattaag 12373837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 39349683 - 39349482
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||| ||| |||||||||||||||||| ||||||  |||| ||         |||||||||||||||| ||||||| || ||||    
T  39349683 ataaattaggtgttggtgatccacgataaaatctaatagacctccgtaatcaaacggtcactttttttaggggattaaaattataaaaattgaaccaaat 39349584  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||| ||||||||||||||||| ||||||||||||||||||||||| |||||| | ||||||||||||||||||||| |||| |||||| |||||||||||    
T  39349583 tgagtaaaagaaataagttaaaggacgtgtttgagaaagttaagagttatggaaccaaattgaataaaagaaataagttaaaggaccgtcagatcaatta 39349484  T
Q  367 ag 368  Q
    ||    
T  39349483 ag 39349482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 263 - 368
Target Start/End: Complemental strand, 8447184 - 8447079
Alignment:
Q  263 aaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatca 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||  ||||||    
T  8447184 aaattgaataaaagaaataagttaagggacgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccggtagatca 8447085  T
Q  363 attaag 368  Q
    ||||||    
T  8447084 attaag 8447079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 168 - 335
Target Start/End: Complemental strand, 39164257 - 39164091
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaac-gtctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||||||||||||||| | |||| ||| ||||||||||| ||||        |||| |||||||| ||||||||||||| ||||    
T  39164257 ataaattaggtgttggtgatacactataaaatttgataggcctccgtaattcaacagtcttttttttaaggg-attaaaat-atcaaaattggaccaaat 39164160  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaa 335  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||  |||||||||||||    
T  39164159 tgaataaaagaaataagttaagggacgtgtttgataaagttaagacttatgagactaaattgaataaaa 39164091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 166 - 288
Target Start/End: Complemental strand, 4032026 - 4031903
Alignment:
Q  166 atataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaa 264  Q
    ||||||||||||||||| ||||||||||||||||||  ||||| | |||||||||||| |||        || |||||||||||||||||||||||||||    
T  4032026 atataaattaggtgttggtgatacactataaaatctggtagacttccgtaattcaacggtctctttttttagtggattaaaattatcaaaattggactaa 4031927  T
Q  265 attgaataaaagaaataagttaag 288  Q
    ||||||||||||||||||||||||    
T  4031926 attgaataaaagaaataagttaag 4031903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 269 - 367
Target Start/End: Complemental strand, 6802075 - 6801977
Alignment:
Q  269 aataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaa 367  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| || |||||| || ||||||||||| ||||||||||  ||||||||||||    
T  6802075 aataaaagaaataagttaagggacgtgtttgagaaaattaagacttatgagaccaaattaaaaaaaagaaataagttaagggaccagcagatcaattaa 6801977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 368
Target Start/End: Original strand, 35952464 - 35952552
Alignment:
Q  280 taagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||||||||||||| |||||| |||||||||| ||||| || ||||||||||||||||||||| |||| |||| ||||||||| |||||    
T  35952464 taagttaagggacgcgtttgacaaagttaagatttatgagaccaaattgaataaaagaaataagttaaaggactgacagatcagttaag 35952552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 282 - 368
Target Start/End: Complemental strand, 25001730 - 25001644
Alignment:
Q  282 agttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||| ||||||  ||||| |||||||||||||||||  ||||||||||||||||||||||| |||| ||||||||| ||||||||||    
T  25001730 agttgagggaccagtttgcgaaagttaagacttatgaaatcaaattgaataaaagaaataagttaaaggaccgacatatcaattaag 25001644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 287
Target Start/End: Original strand, 4032940 - 4033060
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||| |||||||| |||||||| |||||||||| |||||||| |||||| ||||| |||        || ||||||||||||| |||||||||| || |    
T  4032940 ataaactaggtgttaatgatacattataaaatctgatagacctccgtaatccaacggtctctttttttagtggattaaaattattaaaattggaccaagt 4033039  T
Q  267 tgaataaaagaaataagttaa 287  Q
    | ||||||| |||||||||||    
T  4033040 taaataaaaaaaataagttaa 4033060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 323 - 368
Target Start/End: Complemental strand, 4031928 - 4031883
Alignment:
Q  323 aaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||||||||||||||||||| ||||| ||||| |||||||||||||    
T  4031928 aaattgaataaaagaaataagttaagtgaccggcagatcaattaag 4031883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 12373632 - 12373687
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg 223  Q
    ||||||||||||||| ||||||| | |||||||| |||||| |||||||| |||||    
T  12373632 ataaattaggtgttggtgatacagtgtaaaatctgatagacattcgtaatccaacg 12373687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 292
Target Start/End: Complemental strand, 8447129 - 8447095
Alignment:
Q  258 ggactaaattgaataaaagaaataagttaagggac 292  Q
    |||| ||||||||||||||||||||||||||||||    
T  8447129 ggaccaaattgaataaaagaaataagttaagggac 8447095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 39051589 - 39051635
Alignment:
Q  166 atataaattaggtgttgatgatacactataaaatctaatagaccttc 212  Q
    ||||||||||||||||||||||||||||| | |||| || |||||||    
T  39051589 atataaattaggtgttgatgatacactattagatctgatggaccttc 39051635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 306 - 354
Target Start/End: Complemental strand, 1010893 - 1010845
Alignment:
Q  306 ttaagacttatgggatcaaattgaataaaagaaataaattaagggaccg 354  Q
    |||| |||| ||||| ||| ||||||||||||| |||||||||||||||    
T  1010893 ttaatacttttgggaccaatttgaataaaagaattaaattaagggaccg 1010845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 137; Significance: 3e-71; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 7261458 - 7261659
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||| ||| | |||        ||||||||||||||||||||||||||| ||||    
T  7261458 ataaattaggtgttggtgatacactataaaatcttatagaccttcgtaatccaatggtctatttttttaggggattaaaattatcaaaattggaccaaat 7261557  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||    
T  7261558 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataagttaagggaccggtagatcaatta 7261657  T
Q  367 ag 368  Q
    ||    
T  7261658 ag 7261659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 38031371 - 38031170
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||        | ||||||||||||||||||||||||| ||||    
T  38031371 ataaattaggtgttgatgatacactataaaatctgatagacctccgtaattcaacggtctttttttttatgggattaaaattatcaaaattggaccaaat 38031272  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  38031271 tgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataaattaagggaccggcagatcaatta 38031172  T
Q  367 ag 368  Q
    ||    
T  38031171 ag 38031170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 38032335 - 38032536
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||| ||||| |||        ||||||||||||||||||||||||||| ||||    
T  38032335 ataaattaggtgttgatgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaccaaat 38032434  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||| |||||||||||    
T  38032435 tgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttatatgaccaaattgaataaaagaaataaattaagggaccggcagatcaatta 38032534  T
Q  367 ag 368  Q
    ||    
T  38032535 ag 38032536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 174 - 374
Target Start/End: Complemental strand, 17356558 - 17356357
Alignment:
Q  174 taggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaattgaata 272  Q
    ||||||||| |||||||||||||||||| |||||||| |||||| ||||| |||        ||||||||||||||||||||||||||  ||||||||||    
T  17356558 taggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaacaaattgaata 17356459  T
Q  273 aaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaagactt 372  Q
    ||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  17356458 aaagaaataagttaagggacgtgtttgagaaagttaagatttctggcatcaaattgaataaaagaaataagttaagggaccgacagatcaattaagcctt 17356359  T
Q  373 ta 374  Q
    ||    
T  17356358 ta 17356357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 22622070 - 22621869
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||| ||||| | |||||||||||||||||| |||||||| |||||| ||||| |||        ||||||||||||||||||||||||||| ||||    
T  22622070 ataaattcggtgtcggtgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaccaaat 22621971  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||| | |||||||||||    
T  22621970 tgaataaaagaaataagtaaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggactggcagatcaatta 22621871  T
Q  367 ag 368  Q
    ||    
T  22621870 ag 22621869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 34095574 - 34095775
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||| | |||||||||||||||||| |||||||| |||||||||||| |||        ||||||||||||||||||||||||||| ||||    
T  34095574 ataaattaggtgtgggtgatacactataaaatctgatagacctccgtaattcaacggtctccttttttaggggattaaaattatcaaaattggaccaaat 34095673  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||| |||||||||  | ||||||||||    
T  34095674 tgaacaaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaaaaaataagttaagggactaatagatcaatta 34095773  T
Q  367 ag 368  Q
    ||    
T  34095774 ag 34095775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 10803092 - 10802891
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||| ||||||| ||||||| |||||||||| ||| |||| |||||| ||||| |||        |||| |||||||||||||||||||||| ||||    
T  10803092 ataaattcggtgttggtgatacaatataaaatctgataaacctccgtaatccaacggtctctttttttagggtattaaaattatcaaaattggaccaaat 10802993  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||| |||||||| || |||||||||||    
T  10802992 tgaataaaagaaataagttaagggacgtgtttgagaaagttaaaatttatgggaccaaattgaataaaagaaataagttaagggatcggcagatcaatta 10802893  T
Q  367 ag 368  Q
    ||    
T  10802892 ag 10802891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 168 - 367
Target Start/End: Original strand, 17357778 - 17357978
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    |||||||| || ||| ||||||| ||||||||||  ||||||| |||||||||||| |||        ||| ||||||||||||||||||||||  | ||    
T  17357778 ataaattaagtattgctgatacattataaaatctggtagacctccgtaattcaacggtctcttttttcaggagattaaaattatcaaaattggatcatat 17357877  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||| |||||||||||    
T  17357878 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatggaaccaaattgaataaaagaaataagttaagggaccggcagatcaatta 17357977  T
Q  367 a 367  Q
    |    
T  17357978 a 17357978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 56234936 - 56235136
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| ||||||| |||||||||| ||||||||||||||||||  | ||||       || ||||||||| |||||||||| |||  |||    
T  56234936 ataaattaggtgttggtgatacattataaaatctgatagaccttcgtaattcattggtctgtttttt-agaggattaaaagtatcaaaattagaccgaat 56235034  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  56235035 tgaataaaagaaataagttaaggggtgtgtttgataaagttaagacttatgagatcaaattgaataaaagaaataaattaagggactgacagatcaatta 56235134  T
Q  367 ag 368  Q
    ||    
T  56235135 ag 56235136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 8814337 - 8814137
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaac-gtctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| || ||||||||||||||| |||||||| |||||| |||| ||||        |||| |||||||||||||||||| ||| ||||    
T  8814337 ataaattaggtgttggtgttacactataaaatctgatagacctccgtaatccaacagtct-attttttagggtattaaaattatcaaaattcgaccaaat 8814239  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||||||||||||||| |||||||||||| ||||| ||||||||  |||||||||||||||||||| |||||||||||| ||||||||||    
T  8814238 tgaataaaagaaataagttaagggacatgtttgagaaagataagatttatgggactaaattgaataaaagaaataagttaagggaccgatagatcaatta 8814139  T
Q  367 ag 368  Q
    ||    
T  8814138 ag 8814137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 8815272 - 8815473
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||| ||||||| |||||||||||||||||| |||||||| |||||| ||||| | |        || |||||||||||||||||||||||| || |    
T  8815272 ataaatttggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtttttttttttagaggattaaaattatcaaaattggaccaatt 8815371  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||| |||||| || ||||||||    
T  8815372 tgaatagaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaacggaccggcaaatcaatta 8815471  T
Q  367 ag 368  Q
    ||    
T  8815472 ag 8815473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 23757885 - 23758087
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattgga-ctaaa 265  Q
    ||||||||||||||| |||||||| ||||||||| |||||||| |||||||||||| |||         | ||||||||||||||||||||||| | |||    
T  23757885 ataaattaggtgttggtgatacaccataaaatctgatagacctccgtaattcaacggtctctttttttggaggattaaaattatcaaaattggatcaaaa 23757984  T
Q  266 ttgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatt 365  Q
    || ||||||||||||||||||||||||||||||||||||||||| ||||||| ||  ||||||||||||||||||||||||| | |||| ||||||||||    
T  23757985 tttaataaaagaaataagttaagggacgtgtttgagaaagttaaaacttatgagactaaattgaataaaagaaataaattaaagaaccggcagatcaatt 23758084  T
Q  366 aag 368  Q
    |||    
T  23758085 aag 23758087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 235 - 368
Target Start/End: Complemental strand, 56233859 - 56233726
Alignment:
Q  235 aggggattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaa 334  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||| || |||||||||||||    
T  56233859 aggggattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagggacatgtttgagaaagttgagacttatgcgaccaaattgaataaa 56233760  T
Q  335 agaaataaattaagggaccgacagatcaattaag 368  Q
    |||||||| |||||||||||| ||||| ||||||    
T  56233759 agaaataagttaagggaccgatagatctattaag 56233726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 10804110 - 10804311
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    |||||||||| |||||||||||||| |||||||| |||||||| |||||| ||||| |||        || ||||||||||||||||||||| || ||||    
T  10804110 ataaattaggcgttgatgatacactgtaaaatctgatagacctccgtaatccaacggtctttttttttagtggattaaaattatcaaaattgaaccaaat 10804209  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||||||||||||||||||||| || | ||| |||||||||| |||||| ||| ||||||||||||||||||||| ||||||||||| |||||||||||    
T  10804210 tgaataaaagaaataagttaaggaacttatttaagaaagttaaaacttataggaccaaattgaataaaagaaataagttaagggaccggcagatcaatta 10804309  T
Q  367 ag 368  Q
    ||    
T  10804310 ag 10804311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 18091783 - 18091582
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||||||||||||||||| ||||||||  ||||||||||| |||        | | ||||||||||||||||||||||||||||    
T  18091783 ataaattaggtgttggtgatacactataaaatctgatagacctctgtaattcaacggtctcattttttaagagattaaaattatcaaaattggactaaat 18091684  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||||||| | ||||||||| |||||| ||||||||||||||||||||||  | |||||| |||||||||||||| |||||||| || |||||||||||    
T  18091683 tgaataaaatagataagttaatggacgtttttgagaaagttaagacttatgaaaccaaattaaataaaagaaataagttaagggatcggcagatcaatta 18091584  T
Q  367 ag 368  Q
    ||    
T  18091583 ag 18091582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 168 - 339
Target Start/End: Original strand, 22623058 - 22623230
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||| ||||| ||||||| |||||||||| |||||||| |||||| ||||| |||        ||||||||||||||||||||||||||| ||||    
T  22623058 ataaattagatgttggtgatacattataaaatctgatagacctccgtaatccaacggtctctttttgtaggggattaaaattatcaaaattggaccaaat 22623157  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaa 339  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  22623158 tgaataaaagaaataagtaaagggacgtgcttgagaaagttaagacttatgggaccaaattgaataaaagaaa 22623230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 235 - 373
Target Start/End: Original strand, 35193179 - 35193317
Alignment:
Q  235 aggggattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaa 334  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||  ||||| || |||||||||||||    
T  35193179 aggggattaaaattatcaaaaatggaccaaattgaataaaagaaataagttaaaggacgtgtttgagaaagttaagttttatgagaccaaattgaataaa 35193278  T
Q  335 agaaataaattaagggaccgacagatcaattaagacttt 373  Q
    |||||||||||||||||| | ||| ||||||||| ||||    
T  35193279 agaaataaattaagggactggcaggtcaattaagtcttt 35193317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 235 - 368
Target Start/End: Complemental strand, 35191952 - 35191819
Alignment:
Q  235 aggggattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaa 334  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||  | |||||||||||||    
T  35191952 aggggattaaaattatcaaaattgaactaaattgaataaaagaaataagttaatgaacgtgtttgagaaagttaagacttatgaaaccaaattgaataaa 35191853  T
Q  335 agaaataaattaagggaccgacagatcaattaag 368  Q
    |||||||| ||||||||||| |  ||||||||||    
T  35191852 agaaataagttaagggaccggcgaatcaattaag 35191819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 170 - 367
Target Start/End: Complemental strand, 48499565 - 48499367
Alignment:
Q  170 aaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaattg 268  Q
    ||||||| ||||| ||||||||  |||||||| ||||||||  ||||| ||||| |||        ||||||||||||||||||||||||||| ||||||    
T  48499565 aaattagatgttggtgatacaccgtaaaatctgatagacctctgtaatccaacgatctctttttttaggggattaaaattatcaaaattggaccaaattg 48499466  T
Q  269 aataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaa 367  Q
    ||||||| |||||||||||||||| ||||||| |||||||||| |||||||| ||||||||||||||||||||| ||||||   || ||||||||||||    
T  48499465 aataaaataaataagttaagggacatgtttgaaaaagttaagaattatgggaccaaattgaataaaagaaataagttaaggtggcggcagatcaattaa 48499367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 168 - 347
Target Start/End: Original strand, 5433322 - 5433502
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaac-gtctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||  ||||||| |||||||||| |||||||| |||||| |||| ||||        |||| ||||||||||||||||||||| |||||    
T  5433322 ataaattaggtgtttgtgatacattataaaatctgatagacctccgtaatacaacagtctcaatttttagggtattaaaattatcaaaattggagtaaat 5433421  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaa 347  Q
    ||||||||| ||||||||||||| || |||||||||||||||| |||||| ||| ||||||||||||||||||||| ||||    
T  5433422 tgaataaaataaataagttaaggcacatgtttgagaaagttaaaacttataggaccaaattgaataaaagaaataagttaa 5433502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 168 - 366
Target Start/End: Original strand, 48501239 - 48501437
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    |||||||||||||||||||||||| ||||||||| | |||||| ||||||  |||| |||        ||||||||||||| || |||||| ||| ||||    
T  48501239 ataaattaggtgttgatgatacacaataaaatctgacagacctccgtaatctaacggtctctttttttaggggattaaaat-attaaaattagaccaaat 48501337  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||||||||||||||||||| |||| |||||||||||||||||| |||||  | | ||||||||||||||||||| |||| | ||||||||||||||||    
T  48501338 tgaataaaagaaataagttaaaggacatgtttgagaaagttaagaattatgaaacctaattgaataaaagaaataagttaaagaaccgacagatcaatta 48501437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 263 - 367
Target Start/End: Original strand, 48081601 - 48081705
Alignment:
Q  263 aaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatca 362  Q
    |||||||||||||||||||||||||||||| | ||||| ||||||||||||||||| | ||||||||||||||| ||||| |||||||||||||| ||||    
T  48081601 aaattgaataaaagaaataagttaagggacatatttgaaaaagttaagacttatggaaccaaattgaataaaaggaataagttaagggaccgacacatca 48081700  T
Q  363 attaa 367  Q
    |||||    
T  48081701 attaa 48081705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 277 - 368
Target Start/End: Original strand, 34122827 - 34122918
Alignment:
Q  277 aaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||| |||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  34122827 aaatgagttaagggatgtgtttgagaaagttaagatttatgggaccaaattgaataaaagaaataagttaagggaccgacagatcaattaag 34122918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 264 - 368
Target Start/End: Complemental strand, 48080376 - 48080272
Alignment:
Q  264 aattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaa 363  Q
    |||||||||||||||||||||||| ||||  |||||||||||||||||||||||  | |||||| |||||||||||||| ||||| ||||||||||||||    
T  48080376 aattgaataaaagaaataagttaaaggacaagtttgagaaagttaagacttatgaaaccaaattaaataaaagaaataagttaagtgaccgacagatcaa 48080277  T
Q  364 ttaag 368  Q
    |||||    
T  48080276 ttaag 48080272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 282 - 373
Target Start/End: Complemental strand, 34121387 - 34121296
Alignment:
Q  282 agttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaagacttt 373  Q
    ||||||| || ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  34121387 agttaagtgatgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataaattaagggaccggcagatcaattaagccttt 34121296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 274 - 352
Target Start/End: Original strand, 48081552 - 48081630
Alignment:
Q  274 aagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggac 352  Q
    ||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||    
T  48081552 aagaaataacttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggac 48081630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 282 - 368
Target Start/End: Original strand, 48463014 - 48463100
Alignment:
Q  282 agttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||||||||| ||||||||||||||||| ||||||| || ||||||||||||||||||||| ||||||||||  |||||||||||||    
T  48463014 agttaagggatgtgtttgagaaagttaaaacttatgagaccaaattgaataaaagaaataagttaagggaccagcagatcaattaag 48463100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 168 - 342
Target Start/End: Original strand, 36074709 - 36074884
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaa-ttggactaaa 265  Q
    ||||||||||||||| |||||||||||||||| | ||||||||||||||| ||||| |||        | | |||||||| ||| |||| || ||| |||    
T  36074709 ataaattaggtgttggtgatacactataaaatatgatagaccttcgtaatccaacgatct--ttttttatgagattaaaaatataaaaaattagaccaaa 36074806  T
Q  266 ttgaataaaagaaataagttaagggacgtgtttgagaa-agttaagacttatgggatcaaattgaataaaagaaataa 342  Q
    |||||||||| ||||||||||||| ||||| ||||||| |||||| | ||||||||  ||||||||||||| ||||||    
T  36074807 ttgaataaaaaaaataagttaaggaacgtgcttgagaagagttaaaatttatgggactaaattgaataaaataaataa 36074884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 269
Target Start/End: Original strand, 35927031 - 35927133
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| ||||||||||||||||||  |||||||||||||| ||||| |||        ||| ||||||||||||||||||||||  ||||    
T  35927031 ataaattaggtgttggtgatacactataaaatctggtagaccttcgtaatccaacgatctttttttttaggagattaaaattatcaaaattggatcaaat 35927130  T
Q  267 tga 269  Q
    |||    
T  35927131 tga 35927133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 56234789 - 56234840
Alignment:
Q  13 gagagaagaagacatgaagattagggttttaaaaagcataatttgatgaagat 65  Q
    ||||| |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  56234789 gagagtagaagacatgaagattggggtttt-aaaagcataatttgatgaagat 56234840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 35925894 - 35925840
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaac 222  Q
    |||||||||||||||| ||||||||||||||||| ||||| || |||||| ||||    
T  35925894 ataaattaggtgttgacgatacactataaaatctgatagatctccgtaatccaac 35925840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 368
Target Start/End: Original strand, 48081392 - 48081443
Alignment:
Q  317 gggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||| ||||||||||||||| ||||| ||||||||||| || ||||||||||    
T  48081392 gggaccaaattgaataaaaggaataagttaagggaccggcaaatcaattaag 48081443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 292
Target Start/End: Original strand, 34122868 - 34122902
Alignment:
Q  258 ggactaaattgaataaaagaaataagttaagggac 292  Q
    |||| ||||||||||||||||||||||||||||||    
T  34122868 ggaccaaattgaataaaagaaataagttaagggac 34122902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 368
Target Start/End: Original strand, 22624389 - 22624426
Alignment:
Q  331 taaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  22624389 taaaagaaataagttaagggaccggcagatcaattaag 22624426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 292
Target Start/End: Original strand, 48463055 - 48463084
Alignment:
Q  263 aaattgaataaaagaaataagttaagggac 292  Q
    ||||||||||||||||||||||||||||||    
T  48463055 aaattgaataaaagaaataagttaagggac 48463084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 137; Significance: 3e-71; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 28777602 - 28777803
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||| ||||| |||        ||||||||||||||||||||||||||| ||||    
T  28777602 ataaattaggtgttgatgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaccaaat 28777701  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  28777702 tgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataaattaagggaccggcagatcaatta 28777801  T
Q  367 ag 368  Q
    ||    
T  28777802 ag 28777803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 170 - 368
Target Start/End: Original strand, 31938224 - 31938423
Alignment:
Q  170 aaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaattg 268  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||| ||||| |||        |||||||||||||||| |||||||||||||||||    
T  31938224 aaattaggtgttggtgatacactataaaatcttatagaccttcgtaatccaacggtctctttttttaggggattaaaattattaaaattggactaaattg 31938323  T
Q  269 aataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||| |||||||||||||    
T  31938324 aataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaag 31938423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 170 - 373
Target Start/End: Complemental strand, 31937236 - 31937032
Alignment:
Q  170 aaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaattg 268  Q
    ||||||||||||| |||||||||||||||||| |||||||| |||||| ||||| |||        ||||||||||||||||||||||||||| ||| ||    
T  31937236 aaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaccaaaatg 31937137  T
Q  269 aataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||    
T  31937136 aataaaataaataagtgaagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaag 31937037  T
Q  369 acttt 373  Q
     ||||    
T  31937036 ccttt 31937032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 168 - 367
Target Start/End: Complemental strand, 46902534 - 46902334
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||| ||||||  |||||||||||||||||| |||||||| ||||||  |||  |||        |||||||||||||||||||||||| || ||||    
T  46902534 ataaatttggtgttagtgatacactataaaatctgatagacctccgtaatctaacaatctcttcttttaggggattaaaattatcaaaattgcaccaaat 46902435  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  46902434 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagatttatgggaccaaattgaataaaagaaataagttaagggaccgacagatcaatta 46902335  T
Q  367 a 367  Q
    |    
T  46902334 a 46902334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 28776651 - 28776450
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||||||||||| |||||||||| |||||||| |||||| ||||| |||        ||||||||||||||||||||||||||| ||||    
T  28776651 ataaattaggtgttgatgatacattataaaatctgatagacctccgtaatccaacggtctctgtttttaggggattaaaattatcaaaattggaccaaat 28776552  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||| ||||||||||| ||||||||||| |||||| |||| |||||||||||||||||| ||||||||||| |||| || ||||||||||    
T  28776551 tgaataaaagaaatcagttaagggacttgtttgagaaaattaagatttataggatcaaattgaataaaaaaaataaattaaaggactgatagatcaatta 28776452  T
Q  367 ag 368  Q
    ||    
T  28776451 ag 28776450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 35759146 - 35759347
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| ||||||||| |||||||| |||||| |||||||| ||||| ||||           ||||||||||||||||||||||| ||||    
T  35759146 ataaattaggtgttggtgatacactgtaaaatctgatagacattcgtaatccaacggtctgttttttttttagattaaaattatcaaaattggaccaaat 35759245  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||| |||||||||||    
T  35759246 tgaataaaagaaataaattaagggacgtgtttgagaaagttaagacttatgggactaaattgaataaaagaaataagttaagggaccggcagatcaatta 35759345  T
Q  367 ag 368  Q
    ||    
T  35759346 ag 35759347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 46903539 - 46903740
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||| |||        ||||||||||||| |||||||||| || ||||    
T  46903539 ataaattaggtgttggtgatacactataaaatctaatagacctccgtaatccaacggtctttttttttaggggattaaaatcatcaaaattgtaccaaat 46903638  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||||||||||||||||||| |||||||||||| ||| |||||| |||||||| ||||||||||||||||||||| ||||||||| || ||||||||||    
T  46903639 tgaataaaagaaataagttaaaggacgtgtttgaaaaacttaagatttatgggaccaaattgaataaaagaaataagttaagggactgaaagatcaatta 46903738  T
Q  367 ag 368  Q
    ||    
T  46903739 ag 46903740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 168 - 367
Target Start/End: Original strand, 47431102 - 47431302
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||| | ||||||||||||||||||||||||||| | |||| ||||| |||        ||||||||||||||||||||||||||| ||||    
T  47431102 ataaattaggtgtgggtgatacactataaaatctaatagacctccataatccaacggtctctttttttaggggattaaaattatcaaaattggaccaaat 47431201  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||| |||||||||||||||||| |||||||||| |||||||| ||||||| || ||||||||||||||||||||||||||||||| |||| ||||||||    
T  47431202 tgaacaaaagaaataagttaaggaacgtgtttgaaaaagttaaaacttatgagaccaaattgaataaaagaaataaattaagggactgacaaatcaatta 47431301  T
Q  367 a 367  Q
    |    
T  47431302 a 47431302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 168 - 373
Target Start/End: Original strand, 43393968 - 43394175
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| ||||||||| |||||||| |||||||| |||||| ||||| |||        ||||| ||||||||||||||||||||| || |    
T  43393968 ataaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctctttttttagggggttaaaattatcaaaattggaccaatt 43394067  T
Q  267 tgaataaaagaaa-taagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatt 365  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||| ||||||||||    
T  43394068 tgaataaaagaaaataagttaagggacgtctttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaatt 43394167  T
Q  366 aagacttt 373  Q
    ||| ||||    
T  43394168 aagtcttt 43394175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 235 - 368
Target Start/End: Original strand, 50881092 - 50881225
Alignment:
Q  235 aggggattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaa 334  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  50881092 aggggattaaaattatcaaaattgaactaaattgaataaaagaaataaattaagggacgtgtttgagaaagttaagacttatgtggtcaaattgaataaa 50881191  T
Q  335 agaaataaattaagggaccgacagatcaattaag 368  Q
    |||||||| |||||||||||||| ||||||||||    
T  50881192 agaaataagttaagggaccgacacatcaattaag 50881225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 235 - 368
Target Start/End: Original strand, 52525342 - 52525475
Alignment:
Q  235 aggggattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaa 334  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||    
T  52525342 aggggattaaaattattaaaattggactaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgagaccaaattgaataaa 52525441  T
Q  335 agaaataaattaagggaccgacagatcaattaag 368  Q
    |||||||| |||||||||||||| ||||||||||    
T  52525442 agaaataagttaagggaccgacaaatcaattaag 52525475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 169 - 368
Target Start/End: Original strand, 2233221 - 2233421
Alignment:
Q  169 taaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaatt 267  Q
    |||||||||||||| |||||| ||||||||||| ||||| || | |||| ||||| |||        || |||||||||||||||||||||||| |||||    
T  2233221 taaattaggtgttggtgatacgctataaaatcttatagatctccataatccaacgatctctttttttagaggattaaaattatcaaaattggaccaaatt 2233320  T
Q  268 gaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaa 367  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||| || | ||||||||||||||||||| ||||||||||||||||||||||||    
T  2233321 gaataaaagaaataagttaagggacatgtttgacaaagttaagacttatgagaccgaattgaataaaagaaataagttaagggaccgacagatcaattaa 2233420  T
Q  368 g 368  Q
    |    
T  2233421 g 2233421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 173 - 368
Target Start/End: Complemental strand, 54353221 - 54353025
Alignment:
Q  173 ttaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaattgaat 271  Q
    |||||||||  |||||||| ||||||||| ||||||||||||||| ||||| |||         ||||||||||||||| |||||||||| ||||||| |    
T  54353221 ttaggtgttagtgatacacgataaaatctgatagaccttcgtaatccaacggtctctttttttcggggattaaaattataaaaattggaccaaattgagt 54353122  T
Q  272 aaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||    
T  54353121 aaaagaaataagttaagggacatgtttgataaagttaagacttatgggatcaaattgaataaaagaaataagttaaaggaccgtcagatcaattaag 54353025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 2232805 - 2232604
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| ||||||||  |||||||| |||||||| |||||| ||| | |||        |||||||||||||||| ||||||||| |||||    
T  2232805 ataaattaggtgttgctgatacaccgtaaaatctcatagacctccgtaatccaatggtctttttttctaggggattaaaattattaaaattggattaaat 2232706  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||| |||||||| || |||||||||||    
T  2232705 tgaataaaagaaataaattaagggacgtatttgagaaagttaagacttatgtgaccaaattgaataaaagaaataagttaagggatcggcagatcaatta 2232606  T
Q  367 ag 368  Q
    ||    
T  2232605 ag 2232604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 168 - 357
Target Start/End: Original strand, 21729103 - 21729293
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    |||||||||||||||||||||||||||||||| |  ||||||||| |||| ||| | |||        || ||||||||||||||||||||| |  ||||    
T  21729103 ataaattaggtgttgatgatacactataaaatatggtagaccttcataatccaatggtctcattttttagaggattaaaattatcaaaattgaatcaaat 21729202  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgaca 357  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||  |||||||||||||||||||||||||||||||||||    
T  21729203 tgaataaaagaaataagttaagggacgtgtttgagaaagttagaacttatgggactaaattgaataaaagaaataaattaagggaccgaca 21729293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 21728113 - 21727912
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaac-gtctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| ||||||| ||||||||   |||||||||||||||  ||| ||||        ||| |||||||||||||||||||| |  ||||    
T  21728113 ataaattaggtgttggtgatacattataaaatgagatagaccttcgtaatctaacagtctacttttttaggagattaaaattatcaaaattgaatcaaat 21728014  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||| ||| ||||||| |||||||||||    
T  21728013 tgaataaaagaaataagttaagggacatgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttatgggaccggcagatcaatta 21727914  T
Q  367 ag 368  Q
    ||    
T  21727913 ag 21727912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 37609524 - 37609323
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||||||| ||||||| |||||| |||||||| | |||| ||||| |||        |||||||||||||||| |||||||||  ||||    
T  37609524 ataaattaggtgttgatgagacactattaaatcttatagacctccctaatccaacggtctctttttttaggggattaaaattattaaaattggatcaaat 37609425  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||  || |||||| |||||||||||||| |||| |||||| |||||||||||    
T  37609424 tgaataaaagaaataagttgagggacgtgtttgagaaagttaagacttatatgaccaaattaaataaaagaaataagttaaaggaccggcagatcaatta 37609325  T
Q  367 ag 368  Q
    ||    
T  37609324 ag 37609323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 53180719 - 53180919
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||||||||||| ||||| |||||||| |||||| ||||| |||        || ||||||||||||| |||||||||||||||    
T  53180719 ataaattaggtgttggtgatacactatacaatctgatagacctccgtaatccaacggtctccttttttagaggattaaaattattaaaattggactaaat 53180818  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||||||| ||||||||||| | |||||||||||||||||| |||||||| ||||||||||||||||| |||||| ||||||||||| || ||||||||    
T  53180819 tgaataaaaaaaataagttaaagaacgtgtttgagaaagttacgacttatgagatcaaattgaataaaa-aaataagttaagggaccggcaaatcaatta 53180917  T
Q  367 ag 368  Q
    ||    
T  53180918 ag 53180919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 172 - 367
Target Start/End: Original strand, 5691014 - 5691209
Alignment:
Q  172 attaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaattgaa 270  Q
    ||||||||||| ||||||||| |||||||| |||||||| |||||| ||||| |||        |||||||| |||||||||||||||||| || || ||    
T  5691014 attaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctctttttttaggggatttaaattatcaaaattggac-aagtttaa 5691112  T
Q  271 taaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaa 367  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||  |||||||||||||||||||| ||||||||||| ||||||||||||    
T  5691113 taaaagaaataagttaagggacgtgtttgagaaaattaagacttatgtgactaaattgaataaaagaaataagttaagggaccggcagatcaattaa 5691209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 170 - 368
Target Start/End: Original strand, 54354308 - 54354507
Alignment:
Q  170 aaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaattg 268  Q
    ||||||||||||| ||||||||| |||||||| ||||||||   |||| ||| | |||        |||| |||||||||||||||||||||| ||||||    
T  54354308 aaattaggtgttggtgatacactgtaaaatctgatagacctctataatccaatggtctctttttatagggaattaaaattatcaaaattggaccaaattg 54354407  T
Q  269 aataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||  ||||||||||| |||||||||||||    
T  54354408 aatcaaagaaataagttaagggacgtgtttgagaaagttaagacttaagggaccaaattaaataaaagaaataggttaagggaccggcagatcaattaag 54354507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 172 - 360
Target Start/End: Original strand, 17742211 - 17742401
Alignment:
Q  172 attaggtgttgatgatacactata-aaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaattga 269  Q
    ||||||||||| ||||||||| || |||||| |||||||| |||||| ||||| |||        ||||||||||||||||||||||||||  ||||| |    
T  17742211 attaggtgttgttgatacactgtataaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggatcaaattta 17742310  T
Q  270 ataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagat 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||| || |||||    
T  17742311 ataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggatcggcagat 17742401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 172 - 360
Target Start/End: Original strand, 19043531 - 19043721
Alignment:
Q  172 attaggtgttgatgatacactata-aaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaattga 269  Q
    ||||||||||| ||||||||| || |||||| |||||||| |||||| ||||| |||        ||||||||||||||||||||||||||  ||||| |    
T  19043531 attaggtgttgttgatacactgtataaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggatcaaattta 19043630  T
Q  270 ataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagat 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||| || |||||    
T  19043631 ataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggatcggcagat 19043721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 168 - 373
Target Start/End: Original strand, 23073289 - 23073495
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| ||||||||  |||||| | ||| |||| |||||||||||| |||        |||||||||||||||||||||||| || |  |    
T  23073289 ataaattaggtgttggtgatacaccgtaaaatttgatacacctccgtaattcaacggtctctttttttaggggattaaaattatcaaaattgaaccagtt 23073388  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||||||||||||||| | |||||||||||||||| |||||||| ||||||||||||||||||||| |||| |||||| |||||||||||    
T  23073389 tgaataaaagaaataagttaagggacatctttgagaaagttaagatttatgggaccaaattgaataaaagaaataagttaaaggaccggcagatcaatta 23073488  T
Q  367 agacttt 373  Q
    || ||||    
T  23073489 agccttt 23073495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 11347015 - 11346814
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||||||||||| ||| |  ||||||||| |||| ||| | |||        ||||||||||||||||||||||||||  ||||    
T  11347015 ataaattaggtgttggtgatacactatacaatatggtagaccttcataatccaatggtctctcttttcaggggattaaaattatcaaaattggaacaaat 11346916  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||||| |||||| |||||||||| |||||||||| ||||  || |||||| ||||||||||||||||||||||||||||||||||||||    
T  11346915 tgaataaaagaaataaattaaggcacgtgtttgataaagttaagatttatatgaccaaattaaataaaagaaataaattaagggaccgacagatcaatta 11346816  T
Q  367 ag 368  Q
    ||    
T  11346815 ag 11346814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 17116404 - 17116204
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||||||||||||| ||| || ||||| |||||| ||||| | |        |||| ||||||||||||||||||| || ||||    
T  17116404 ataaattaggtgttggtgatacactataaactctgatggacctccgtaatccaacggtgtcattttttaggg-attaaaattatcaaaattgaaccaaat 17116306  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||| || ||||||||||||||||||||| |||||||| || |||||||||||    
T  17116305 tgaataaaagaaataagttaagggacgtgtttgagaaacttaacacttatgagaccaaattgaataaaagaaataagttaagggatcggcagatcaatta 17116206  T
Q  367 ag 368  Q
    ||    
T  17116205 ag 17116204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 168 - 367
Target Start/End: Complemental strand, 52522129 - 52521930
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaac-gtctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||||||||||||||||| |||||||| |||||| |||| ||||        ||||||||||| ||||||||||||||| ||||    
T  52522129 ataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaactgtct-tttttttaggggattaaagttatcaaaattggaccaaat 52522031  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||||||| |||||||| || |||||||||||||||||||||||  |||| || |||||||||| |||||||||| ||||||||||  |||||||||||    
T  52522030 tgaataaaataaataagtgaaaggacgtgtttgagaaagttaagatctatgagaccaaattgaattaaagaaataagttaagggaccagcagatcaatta 52521931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 235 - 368
Target Start/End: Original strand, 53765949 - 53766082
Alignment:
Q  235 aggggattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaa 334  Q
    |||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||| || | |||||||||||||    
T  53765949 aggggattaaaattattaaaattggatcaaattgaataaaagaaataagttaagggacgtgtttgagaaaattaagacttacggaaccaaattgaataaa 53766048  T
Q  335 agaaataaattaagggaccgacagatcaattaag 368  Q
    |||||||| ||||||||||  |||||||||||||    
T  53766049 agaaataagttaagggacccgcagatcaattaag 53766082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 238 - 367
Target Start/End: Complemental strand, 55209914 - 55209785
Alignment:
Q  238 ggattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaaga 337  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| | ||||||||||||||||    
T  55209914 ggattaaaattatcaaaattggaccaaattaaataaaagaaataaattaagggacgtgtttgagaaagttaaaacttatggaaccaaattgaataaaaga 55209815  T
Q  338 aataaattaagggaccgacagatcaattaa 367  Q
    ||||| |||||||||||  |||||||||||    
T  55209814 aataagttaagggaccggtagatcaattaa 55209785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 235 - 367
Target Start/End: Complemental strand, 53764563 - 53764432
Alignment:
Q  235 aggggattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaa 334  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||    
T  53764563 aggggattaaaattatcaaaatttgactaaattgaataaaagaaataagttaaaggacgtgtttgagaaagttaagacttatgagaccaaattgaataaa 53764464  T
Q  335 agaaataaattaagggaccgacagatcaattaa 367  Q
    | |||||| |||| ||||||  |||||||||||    
T  53764463 a-aaataagttaaaggaccggtagatcaattaa 53764432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 239 - 368
Target Start/End: Complemental strand, 23091322 - 23091193
Alignment:
Q  239 gattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaa 338  Q
    |||||||||||||||| |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||    
T  23091322 gattaaaattatcaaagttggaccaaattgaataaaagaattaagttaagagacgtgtttgagaaagttaagacttatgtgaccaaattgaataaaagaa 23091223  T
Q  339 ataaattaagggaccgacagatcaattaag 368  Q
    |||| ||||  ||||| |||||||||||||    
T  23091222 ataagttaaaagaccggcagatcaattaag 23091193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 237 - 368
Target Start/End: Complemental strand, 53178834 - 53178703
Alignment:
Q  237 gggattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaag 336  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||  ||||||||||||||||     
T  53178834 gggattaaaatgatcaaaattggatcaaattgaataaaagaaataagttaaggaacgtgtttgagaaagttaaggcttatgaaatcaaattgaataaaaa 53178735  T
Q  337 aaataaattaagggaccgacagatcaattaag 368  Q
    |||||| |||||||| || |||||||||||||    
T  53178734 aaataagttaagggatcggcagatcaattaag 53178703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 258 - 366
Target Start/End: Complemental strand, 43392738 - 43392630
Alignment:
Q  258 ggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgaca 357  Q
    |||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||    
T  43392738 ggaccaaattgaataaaagaaataagttcagggacgtgcttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccgaca 43392639  T
Q  358 gatcaatta 366  Q
    |||||||||    
T  43392638 gatcaatta 43392630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 237 - 368
Target Start/End: Original strand, 10979160 - 10979291
Alignment:
Q  237 gggattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaag 336  Q
    |||| ||||||||||||||||| |  |||||||||||||||||||||| ||  ||||||||||||||| |||||| |||||||| |||||||||||||||    
T  10979160 gggactaaaattatcaaaattgaatcaaattgaataaaagaaataagtgaaatgacgtgtttgagaaatttaagatttatgggaccaaattgaataaaag 10979259  T
Q  337 aaataaattaagggaccgacagatcaattaag 368  Q
    |||||| ||||||||||| |||||||||||||    
T  10979260 aaataagttaagggaccggcagatcaattaag 10979291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 238 - 373
Target Start/End: Original strand, 46986077 - 46986211
Alignment:
Q  238 ggattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaaga 337  Q
    |||||||||||||||||||| ||| ||||| ||||| | |||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  46986077 ggattaaaattatcaaaatttgaccaaatttaataaga-aaataagttaagggacgtgtttgagagagttaagacttattggaccaaattgaataaaaga 46986175  T
Q  338 aataaattaagggaccgacagatcaattaagacttt 373  Q
    ||||||||||||| ||| || |||||||||| ||||    
T  46986176 aataaattaaggggccggcaaatcaattaagccttt 46986211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 5689922 - 5689727
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    |||||||| |||||| |||||||||||||||||| |||||||| |||||| ||||| |||        |  |||||||||||||||||||||||| ||||    
T  5689922 ataaattaagtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctcttgttttaaaggattaaaattatcaaaattggaccaaat 5689823  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    | ||||||||||||||||||||||||||||||| ||||       ||||||||| |||||| ||||||||||||||  ||||||| ||||||||||||||    
T  5689822 ttaataaaagaaataagttaagggacgtgtttgggaaa------tcttatgggaccaaatttaataaaagaaataagctaagggagcgacagatcaatta 5689729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 171 - 368
Target Start/End: Original strand, 11348390 - 11348587
Alignment:
Q  171 aattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaattga 269  Q
    |||||||||| | ||||| |||||||||||| |||||||| |||||||||||| |||        | || |||||||||||||||||||||  ||||| |    
T  11348390 aattaggtgtgg-tgatatactataaaatctgatagacctccgtaattcaacggtctctttttctaaggaattaaaattatcaaaattggatcaaattaa 11348488  T
Q  270 ataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    ||||||||||| |||||||| || ||| ||| |||||||| ||||||| || ||||||||||||||||||||| ||||||||||| |||||||||||||    
T  11348489 ataaaagaaattagttaaggaacatgtatgataaagttaatacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaag 11348587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 47429825 - 47429629
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaac-gtctgnnnnnnn--aggggattaaaattatcaaaattggactaa 264  Q
    ||||||||| ||||| ||||||||||||||||||||||||||| |||||| |||| ||||          ||||||||||||||||||||||||||| ||    
T  47429825 ataaattagatgttggtgatacactataaaatctaatagacctccgtaatccaacagtctttttttttttaggggattaaaattatcaaaattggaccaa 47429726  T
Q  265 attgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaat 364  Q
    |||||| ||||||       ||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||   |||||||||    
T  47429725 attgaacaaaaga-------taaaggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggacatgcagatcaat 47429633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 239 - 367
Target Start/End: Original strand, 15290476 - 15290604
Alignment:
Q  239 gattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaa 338  Q
    |||||||||||| |||||||||  |||||||||||| ||||||| ||||  ||| ||||||||||| |||||||||||| ||||||||| ||||||||||    
T  15290476 gattaaaattattaaaattggatcaaattgaataaatgaaataatttaatagacatgtttgagaaaattaagacttatgtgatcaaattaaataaaagaa 15290575  T
Q  339 ataaattaagggaccgacagatcaattaa 367  Q
    |||| ||||||||||||||||||||||||    
T  15290576 ataagttaagggaccgacagatcaattaa 15290604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 238 - 373
Target Start/End: Original strand, 17117387 - 17117520
Alignment:
Q  238 ggattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaaga 337  Q
    |||||||||| ||||||||| | | ||||||||||||| ||| |  ||||||||||||||||||||| |||||||||||| || ||||||||||||||||    
T  17117387 ggattaaaatcatcaaaatttgcccaaattgaataaaaaaaaaa--ttaagggacgtgtttgagaaacttaagacttatgagaccaaattgaataaaaga 17117484  T
Q  338 aataaattaagggaccgacagatcaattaagacttt 373  Q
    ||||| ||||||||||||||||||||||||| ||||    
T  17117485 aataagttaagggaccgacagatcaattaagccttt 17117520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 258 - 367
Target Start/End: Complemental strand, 23072171 - 23072063
Alignment:
Q  258 ggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgaca 357  Q
    |||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||  ||    
T  23072171 ggaccaaattgaataaaagaaataagttaagg-acgtctttgagaaagttaagacttatgggaccaaattgaataaatgaaatgaattaagggaccagca 23072073  T
Q  358 gatcaattaa 367  Q
    ||||||||||    
T  23072072 gatcaattaa 23072063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 17741033 - 17740889
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||||||||||||||||| |||||||| |||||| | ||| |||        |  |||||||||||||||||||||||  ||||    
T  17741033 ataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccgacggtctctatttttaaaggattaaaattatcaaaattggatcaaat 17740934  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaaga 311  Q
    | |||||||||||||||||||||||| ||||||||||||||||||    
T  17740933 ttaataaaagaaataagttaagggacatgtttgagaaagttaaga 17740889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 19042353 - 19042209
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||||||||||||||||| |||||||| |||||| | ||| |||        |  |||||||||||||||||||||||  ||||    
T  19042353 ataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccgacggtctctatttttaaaggattaaaattatcaaaattggatcaaat 19042254  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaaga 311  Q
    | |||||||||||||||||||||||| ||||||||||||||||||    
T  19042253 ttaataaaagaaataagttaagggacatgtttgagaaagttaaga 19042209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 240 - 368
Target Start/End: Original strand, 33113306 - 33113426
Alignment:
Q  240 attaaaattatcaaaattggactaaattgaataaaa-gaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaa 338  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||| ||         |||||||||||||||||    
T  33113306 attaaaattatcaaaattggaccaaattgaataaaaagaaataagttaagggacgtgtttgaaaaagttaaaac---------caaattgaataaaagaa 33113396  T
Q  339 ataaattaagggaccgacagatcaattaag 368  Q
    ||||||||||||| ||  ||||||||||||    
T  33113397 ataaattaagggatcggtagatcaattaag 33113426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 168 - 348
Target Start/End: Original strand, 47917528 - 47917708
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||| ||||||| | |||||||||||||||| ||| |||| |||||| ||||  |||        |||||||||||||||| |||||| ||  ||||    
T  47917528 ataaattcggtgttggtaatacactataaaatctgataaacctccgtaatccaacaatctttatttttaggggattaaaattattaaaattagatcaaat 47917627  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaag 348  Q
    ||||||||||||||||||| ||||||||||||||||||  ||||| ||||| || |||||| |||||||||||||| |||||    
T  47917628 tgaataaaagaaataagtt-agggacgtgtttgagaaaactaagatttatgagaccaaattaaataaaagaaataagttaag 47917708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 168 - 287
Target Start/End: Original strand, 37610678 - 37610798
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||||||||||||||||| |||||||| |||||| ||||| |||        ||||||||||||||||||||||||||| ||||    
T  37610678 ataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctttttttttaggggattaaaattatcaaaattggaccaaat 37610777  T
Q  267 tgaataaaagaaataagttaa 287  Q
    ||||||||| |||||||||||    
T  37610778 tgaataaaaaaaataagttaa 37610798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 282 - 374
Target Start/End: Complemental strand, 34014596 - 34014504
Alignment:
Q  282 agttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaagacttta 374  Q
    |||||||||| ||||||| || |||||||| |||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||| |||||    
T  34014596 agttaagggatgtgtttgcgacagttaagatttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagccttta 34014504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 270 - 351
Target Start/End: Complemental strand, 50879594 - 50879513
Alignment:
Q  270 ataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaaggga 351  Q
    |||||| |||||| ||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||| ||||||||    
T  50879594 ataaaaaaaataatttaagggacgtgtttaagaaagttaagatttatgggaccaaattgaataaaagaaataagttaaggga 50879513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 168 - 292
Target Start/End: Complemental strand, 35758207 - 35758082
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| ||||||||| |||||||| |||||| |||||||| ||||| | ||          |||||||||||||||||||||||| ||||    
T  35758207 ataaattaggtgttggtgatacactgtaaaatctgatagacattcgtaatccaacggtttgttttttttttggattaaaattatcaaaattggaccaaat 35758108  T
Q  267 tgaataaaagaaataagttaagggac 292  Q
    ||||||||||||||||||||||||||    
T  35758107 tgaataaaagaaataagttaagggac 35758082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 282 - 368
Target Start/End: Original strand, 34015798 - 34015884
Alignment:
Q  282 agttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||||| ||| ||||||| || | ||| ||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||    
T  34015798 agttaaaggatgtgtttgcgacatttatgacttatgggaccaaattgaataaaagaaataacttaagggaccgacaaatcaattaag 34015884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 10978206 - 10978093
Alignment:
Q  170 aaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaattg 268  Q
    |||||||||| || |||||||||||||||| | ||||||||||||||| ||||| | |        |||||||||||||||| ||||||||||||| |||    
T  10978206 aaattaggtgatggtgatacactataaaattttatagaccttcgtaatccaacggtttctttttttaggggattaaaattattaaaattggactaagttg 10978107  T
Q  269 aataaaagaaataa 282  Q
    ||||||||||||||    
T  10978106 aataaaagaaataa 10978093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 282 - 373
Target Start/End: Original strand, 24376458 - 24376549
Alignment:
Q  282 agttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaagacttt 373  Q
    |||||||||| ||||||| ||  ||||| ||||||| || ||||||||||||||||||||| |||| |||||| ||||||||||||| ||||    
T  24376458 agttaagggatgtgtttgtgactgttaaaacttatgagaccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagccttt 24376549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 282 - 365
Target Start/End: Original strand, 27750461 - 27750544
Alignment:
Q  282 agttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatt 365  Q
    |||||||||| |||||||| ||| |||| ||||||| || |||||||||||||||||||||||||| |||| | ||||||||||    
T  27750461 agttaagggatgtgtttgaaaaaattaaaacttatgagaccaaattgaataaaagaaataaattaaaggactggcagatcaatt 27750544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 306 - 368
Target Start/End: Original strand, 53101827 - 53101889
Alignment:
Q  306 ttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||||| |||| ||| ||||||||||||||||||||| ||||||||||| |||||||||||||    
T  53101827 ttaagaattataggaccaaattgaataaaagaaataacttaagggaccggcagatcaattaag 53101889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 275
Target Start/End: Complemental strand, 50879888 - 50879782
Alignment:
Q  170 aaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaattg 268  Q
    ||||||||||||| |||||||||||||||||| |||||||| ||||||  |||| | |        | ||||||||||||||||||||||||| ||||||    
T  50879888 aaattaggtgttggtgatacactataaaatctgatagacctccgtaatctaacgatttttttttctatgggattaaaattatcaaaattggacaaaattg 50879789  T
Q  269 aataaaa 275  Q
    |||||||    
T  50879788 aataaaa 50879782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 289
Target Start/End: Original strand, 55210823 - 55210945
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaac-gtctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    |||||||| |||||| ||||||| |||||||||| ||||| || ||||||||||| || |        || |||||||||||||||||||||  | ||||    
T  55210823 ataaattatgtgttggtgatacattataaaatctgatagatctccgtaattcaacagtatctttttttagtggattaaaattatcaaaattgatccaaat 55210922  T
Q  267 tgaataaaagaaataagttaagg 289  Q
    | |||||||||||||||||||||    
T  55210923 ttaataaaagaaataagttaagg 55210945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 368
Target Start/End: Complemental strand, 27749199 - 27749108
Alignment:
Q  277 aaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||| ||||||||||   |||| |||||||||||||||||| ||  ||||||||||||||| |||| |||||| ||||  ||||||||||||    
T  27749199 aaatgagttaagggatacgtttaagaaagttaagacttatgtgactaaattgaataaaagacataagttaaggaaccggtagatcaattaag 27749108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 21729380 - 21729426
Alignment:
Q  311 acttatgggatcaaattgaataaaagaaataaattaagggaccgaca 357  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||    
T  21729380 acttatgggactaaattgaataaaagaaataaattaagggaccgaca 21729426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 367
Target Start/End: Original strand, 37610797 - 37610841
Alignment:
Q  323 aaattgaataaaagaaataaattaagggaccgacagatcaattaa 367  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||    
T  37610797 aaattgaataaaagaaataagttaagggaccggcagatcaattaa 37610841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 15290405 - 15290458
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaa 221  Q
    ||||||||||| |||||||||||||||||||| |  ||||||||| ||||||||    
T  15290405 ataaattaggtattgatgatacactataaaatatggtagaccttcataattcaa 15290458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 53764951 - 53764898
Alignment:
Q  170 aaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg 223  Q
    |||||| |||||| |||||||| ||||||||| |||||||| ||||||||||||    
T  53764951 aaattaagtgttggtgatacaccataaaatctgatagacctccgtaattcaacg 53764898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 374
Target Start/End: Complemental strand, 35758112 - 35758060
Alignment:
Q  322 caaattgaataaaagaaataaattaagggaccgacagatcaattaagacttta 374  Q
    ||||||||||||||||||||| ||||||||||| |||||  |||||| |||||    
T  35758112 caaattgaataaaagaaataagttaagggaccggcagattgattaagccttta 35758060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 292
Target Start/End: Original strand, 21729387 - 21729421
Alignment:
Q  258 ggactaaattgaataaaagaaataagttaagggac 292  Q
    ||||||||||||||||||||||||| |||||||||    
T  21729387 ggactaaattgaataaaagaaataaattaagggac 21729421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 292
Target Start/End: Complemental strand, 34014560 - 34014526
Alignment:
Q  258 ggactaaattgaataaaagaaataagttaagggac 292  Q
    |||| ||||||||||||||||||||||||||||||    
T  34014560 ggaccaaattgaataaaagaaataagttaagggac 34014526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 262 - 292
Target Start/End: Original strand, 37610796 - 37610826
Alignment:
Q  262 taaattgaataaaagaaataagttaagggac 292  Q
    |||||||||||||||||||||||||||||||    
T  37610796 taaattgaataaaagaaataagttaagggac 37610826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 322 - 368
Target Start/End: Complemental strand, 53101590 - 53101545
Alignment:
Q  322 caaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    ||||||||||||||||| |||||||| |||||| |||||||||||||    
T  53101590 caaattgaataaaagaa-taaattaaaggaccggcagatcaattaag 53101545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 291
Target Start/End: Complemental strand, 50879546 - 50879513
Alignment:
Q  258 ggactaaattgaataaaagaaataagttaaggga 291  Q
    |||| |||||||||||||||||||||||||||||    
T  50879546 ggaccaaattgaataaaagaaataagttaaggga 50879513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 55209984 - 55209931
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaa 221  Q
    ||||||||||||||| | |||||||||||| ||| |||||||| |||||| |||    
T  55209984 ataaattaggtgttggtaatacactataaattctgatagacctccgtaatccaa 55209931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 3e-65; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 168 - 374
Target Start/End: Complemental strand, 7110429 - 7110222
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    |||||||||| ||||||||||||||||||||||| |||||||| || ||| ||||| |||        ||||||||||||||||||||||||||| ||||    
T  7110429 ataaattaggcgttgatgatacactataaaatctgatagacctccgcaatccaacgatctctttttttaggggattaaaattatcaaaattggaccaaat 7110330  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||| |||||||||||    
T  7110329 tgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttataggaccaaattaaataaaagaaataaattaagggaccggcagatcaatta 7110230  T
Q  367 agacttta 374  Q
    || |||||    
T  7110229 agccttta 7110222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 51693350 - 51693149
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||||||||||||||||  |||||||| |||||| ||||| |||        |||| ||||||||||||||||||| || ||||    
T  51693350 ataaattaggtgttggtgatacactataaaatccgatagacctccgtaatccaacggtctctttttttagggtattaaaattatcaaaattgaaccaaat 51693251  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  51693250 tgaataaaagaaataagttaaaggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggaccgacagatcaatta 51693151  T
Q  367 ag 368  Q
    ||    
T  51693150 ag 51693149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 170 - 368
Target Start/End: Complemental strand, 52086826 - 52086629
Alignment:
Q  170 aaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacgtctgnnnnnnnaggggattaaaattatcaaaattggactaaattga 269  Q
    |||||||||| || |||||||||||||||| | ||||||||||||||| |||||  |        |||||||||||||||| ||||||||||||||||||    
T  52086826 aaattaggtgatggtgatacactataaaattttatagaccttcgtaatccaacggtt-tttttttaggggattaaaattattaaaattggactaaattga 52086728  T
Q  270 ataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||    
T  52086727 ataaaagaaataagttaagggacgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaag 52086629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 170 - 368
Target Start/End: Complemental strand, 5488702 - 5488503
Alignment:
Q  170 aaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaattg 268  Q
    |||||| |||||| |||||||||||||||||| |||||||| |||||| ||||| |||        | ||||||||||||||||||||||||  ||||||    
T  5488702 aaattacgtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctctttttctaagggattaaaattatcaaaattggatcaaattg 5488603  T
Q  269 aataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5488602 aataaaagaaataagttaaaggacgtgtttgagaaagttaagtcttatggaatcaaattgaataaaagaaataaattaagggaccaacagatcaattaag 5488503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 168 - 354
Target Start/End: Original strand, 7111390 - 7111577
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||| ||||| |||        ||||||||||||||||||||||||||| ||||    
T  7111390 ataaattaggtgttgatgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaccaaat 7111489  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccg 354  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||    
T  7111490 tgaataaaagaaatcagttaatggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataaattaaggaaccg 7111577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 51468542 - 51468341
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||| ||||||| |||||||||||||||||| |||||||| |||||| || |  |||        |||||||||||||||| |||||||||| ||||    
T  51468542 ataaattgggtgttggtgatacactataaaatctgatagacctccgtaatccatcaatctttttttttaggggattaaaattattaaaattggaccaaat 51468443  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||| ||||||||||| |||||||||||    
T  51468442 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaaaaaataagttaagggaccggcagatcaatta 51468343  T
Q  367 ag 368  Q
    ||    
T  51468342 ag 51468341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 170 - 364
Target Start/End: Original strand, 50484913 - 50485108
Alignment:
Q  170 aaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaattg 268  Q
    ||||||||||||| ||||||||| |||||||| ||||||||  ||||| ||| | |||        ||||||||||||||||||||||||||| ||||||    
T  50484913 aaattaggtgttggtgatacactgtaaaatctgatagacctatgtaatccaatggtctctttttttaggggattaaaattatcaaaattggaccaaattg 50485012  T
Q  269 aataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaat 364  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||| ||||||||||| |||||||||    
T  50485013 aataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaatgaaataagttaagggaccggcagatcaat 50485108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 5488782 - 5488983
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||||||||||||||| | |||||||| |||||| ||||| |||        | ||||||||||||||||||||||||| ||||    
T  5488782 ataaattaggtgttggtgatacactataaaatttgatagacctccgtaatccaacggtctctttttctaagggattaaaattatcaaaattggaccaaat 5488881  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||| || | |||||||||    
T  5488882 tgaataaaagaaataagttaatgaacgtgtttgagaaagttaagacttatgggactaaattgaataaaagaaataagttaagggatcggcggatcaatta 5488981  T
Q  367 ag 368  Q
    ||    
T  5488982 ag 5488983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 168 - 367
Target Start/End: Original strand, 45229518 - 45229718
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||| || |||||||||| |||||||| |||||| ||||  |||        |  |||||||||||||||||||||||  ||||    
T  45229518 ataaattaggtgttggtgatccattataaaatctgatagacctccgtaatccaacaatctttttttttataggattaaaattatcaaaattggatcaaat 45229617  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  45229618 tgaataaaagaaataagttaagggacgtgtttgagaaaattaagatttatgagaccaaattgaataaaagaaataaattaagggaccgacagatcaatta 45229717  T
Q  367 a 367  Q
    |    
T  45229718 a 45229718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 173 - 368
Target Start/End: Complemental strand, 18819460 - 18819264
Alignment:
Q  173 ttaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaattgaat 271  Q
    |||||||||| |||||||||||||||||| ||| |||| |||||| ||||| | |        |||||||||||||||| |||||||| | |||||||||    
T  18819460 ttaggtgttggtgatacactataaaatctgatatacctccgtaatccaacggtttcttttcataggggattaaaattattaaaattgggccaaattgaat 18819361  T
Q  272 aaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||| |||||||||||||    
T  18819360 aaaagaaataaattaagggacgtgattgagaaagttaagacttatgggatcaaattgaataaaaaaaataatttaaggaaccggcagatcaattaag 18819264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 168 - 373
Target Start/End: Original strand, 51468816 - 51469022
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| ||||||||| |||||||||||||| || |||||| ||| | | |        |||||||||||||||| |||||||||| ||||    
T  51468816 ataaattaggtgttggtgatacactgtaaaatctaatagatctccgtaatccaatgctttttttttttaggggattaaaattattaaaattggaccaaat 51468915  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||| |||||||||||| |||||||||||||| |||||||||| |||||||| |||||||||||||| |||||| ||||||||| |||||||||||||    
T  51468916 tgaatagaagaaataagtttagggacgtgtttgaaaaagttaagatttatgggaccaaattgaataaaaaaaataagttaagggactgacagatcaatta 51469015  T
Q  367 agacttt 373  Q
    || ||||    
T  51469016 agccttt 51469022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 17244378 - 17244177
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||| | | ||||||| |||||||||| |||||||| |||||| ||||| |||        ||| ||||||||||||||||||||||| ||||    
T  17244378 ataaattaggtatcggtgatacattataaaatctgatagacctccgtaatccaacggtctctttttttaggagattaaaattatcaaaattggaccaaat 17244279  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||| |||| ||| | |||||    
T  17244278 tgaatcaaagaaataagttaagggacgtgtttgagaaagttgagacttatgggaccaaattgaataaaagaaataagttaaggaaccggcaggttaatta 17244179  T
Q  367 ag 368  Q
    ||    
T  17244178 ag 17244177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 52759566 - 52759365
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||||||||||||||||| ||||||||  ||||||||||| |||        | | ||||||||||||||||||||||||||||    
T  52759566 ataaattaggtgttggtgatacactataaaatctgatagacctctgtaattcaacggtctcattttttaagagattaaaattatcaaaattggactaaat 52759467  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||||||| | ||||||||| |||||| ||||||||||||||||||||||  | |||||| |||||||||||||| |||||||| || |||||||||||    
T  52759466 tgaataaaatagataagttaatggacgtttttgagaaagttaagacttatgaaaccaaattaaataaaagaaataagttaagggatcggcagatcaatta 52759367  T
Q  367 ag 368  Q
    ||    
T  52759366 ag 52759365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 168 - 354
Target Start/End: Original strand, 38235065 - 38235251
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacgtctgnnnnnnnaggggattaaaattatcaaaattggactaaatt 267  Q
    ||||||||||||||| ||||||||| |||||||| |||||| |||||||| |||||  |          ||||||||| |||| |||||||||| |||||    
T  38235065 ataaattaggtgttggtgatacactgtaaaatcttatagacattcgtaatccaacggtttgttttttttgggattaaacttattaaaattggaccaaatt 38235164  T
Q  268 gaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccg 354  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||    
T  38235165 taataaaagaaataagttaagggacgtgtttgagaaagttaagacttatatgaccaaattgaataaaagaaataaattaagggaccg 38235251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 173 - 368
Target Start/End: Complemental strand, 40187800 - 40187605
Alignment:
Q  173 ttaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaattgaat 271  Q
    |||||||||| |||||||| ||||||||| |||||||| |||||| ||||| |||        |||||||||||||||| |||||||||| ||||||| |    
T  40187800 ttaggtgttggtgatacacgataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattataaaaattggaccaaattgagt 40187701  T
Q  272 aaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||||||||||||||||| || ||||||| ||||||||||||||||||| ||||||||||||||||||||| | || |||||| |||||||||||||    
T  40187700 aaaagaaataagttaagg-acatgtttgataaagttaagacttatgggaccaaattgaataaaagaaataagtgaaaggaccgtcagatcaattaag 40187605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 168 - 360
Target Start/End: Complemental strand, 1822112 - 1821918
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    |||||||||||||| ||||||||||||||||||  ||||||||||||||  ||||| |||        |  |||||||||||||||||||| ||||||||    
T  1822112 ataaattaggtgttaatgatacactataaaatcagatagaccttcgtaacccaacggtctctttttttaaaggattaaaattatcaaaattagactaaat 1822013  T
Q  267 tgaataaaagaaa-taagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagat 360  Q
    | ||||||| ||| |||||||||||||||||||||||||||||| | |||| |||  ||||||||||||| ||||||||||||| ||||||||||    
T  1822012 taaataaaaaaaaataagttaagggacgtgtttgagaaagttaaaatttataggacaaaattgaataaaaaaaataaattaaggaaccgacagat 1821918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 172 - 374
Target Start/End: Original strand, 1823215 - 1823414
Alignment:
Q  172 attaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaattgaa 270  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||| ||||| | |        ||  ||||||||||||||||||||||  ||||||||    
T  1823215 attaggtgttggtgatacactataaaatctgatagaccttcgtaatccaacggtttatctttttagaagattaaaattatcaaaattggatcaaattgaa 1823314  T
Q  271 taaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaagac 370  Q
    ||||| |||||||||||| ||| |||||||||   |||||||||||| ||  |||||||||||||||||||| ||||||||||| ||||||||||||| |    
T  1823315 taaaa-aaataagttaagcgacatgtttgaga---ttaagacttatgtgactaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 1823410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 238 - 373
Target Start/End: Original strand, 17245651 - 17245785
Alignment:
Q  238 ggattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaaga 337  Q
    |||||||||| ||||||||||||| ||||| ||||||| |||||||||||||||| ||||||||| |||||||||||||| || ||||||||||||||||    
T  17245651 ggattaaaatgatcaaaattggaccaaatttaataaaa-aaataagttaagggacttgtttgagagagttaagacttatgagaccaaattgaataaaaga 17245749  T
Q  338 aataaattaagggaccgacagatcaattaagacttt 373  Q
    |||||||||||| |||| | ||||||||||| ||||    
T  17245750 aataaattaaggaaccggcggatcaattaagccttt 17245785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 168 - 353
Target Start/End: Original strand, 52087689 - 52087875
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||| ||||| ||||||||  |||||| | |||||||| |||||||||||| |||        |||||| ||||||||||||||||| |  ||||    
T  52087689 ataaattagatgttggtgatacaccgtaaaatttgatagacctccgtaattcaacggtctctttttttaggggactaaaattatcaaaattgaatcaaat 52087788  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggacc 353  Q
    |||||||||||||||||| || |||||||||||||||||||||||| |||| || ||||||||||||||||||||| ||||| ||||    
T  52087789 tgaataaaagaaataagtgaaaggacgtgtttgagaaagttaagacatatgagaccaaattgaataaaagaaataagttaagagacc 52087875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 275 - 368
Target Start/End: Complemental strand, 25181596 - 25181503
Alignment:
Q  275 agaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||| |||||||||||||    
T  25181596 agaaataagttaagggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaag 25181503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 239 - 366
Target Start/End: Complemental strand, 47533088 - 47532961
Alignment:
Q  239 gattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaa 338  Q
    |||||||||||||||||||| |  |||||||||||| ||||||| |||||| |||||||||| |||||||||| ||||| || |||||||||||||| ||    
T  47533088 gattaaaattatcaaaattgaatcaaattgaataaatgaaataatttaaggaacgtgtttgataaagttaagatttatgagaccaaattgaataaaaaaa 47532989  T
Q  339 ataaattaagggaccgacagatcaatta 366  Q
    |||| ||||||||||| |||||||||||    
T  47532988 ataacttaagggaccggcagatcaatta 47532961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 235 - 368
Target Start/End: Complemental strand, 50483645 - 50483513
Alignment:
Q  235 aggggattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaa 334  Q
    |||||| ||||||||| |||||||||| |||||||||||||||||||| ||||  ||||| ||| ||||| |||||||||||| || ||||||||||| |    
T  50483645 aggggagtaaaattataaaaattggaccaaattgaataaaagaaataaattaaatgacgtttttaagaaaattaagacttatgagaccaaattgaataca 50483546  T
Q  335 agaaataaattaagggaccgacagatcaattaag 368  Q
    |||||||| ||||  |||||||||||||||||||    
T  50483545 agaaataagttaa-agaccgacagatcaattaag 50483513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 235 - 362
Target Start/End: Complemental strand, 45228410 - 45228283
Alignment:
Q  235 aggggattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaa 334  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||| | |||||||||| || ||||| | ||||||||  ||||| ||||||    
T  45228410 aggggattaaaattattaaaattggaccaaattgaataaaagaaataagttaaagaacgtgtttgataaggttaaaatttatgggacaaaattaaataaa 45228311  T
Q  335 agaaataaattaagggaccgacagatca 362  Q
    |||||||| |||| | |||| |||||||    
T  45228310 agaaataagttaaagaaccggcagatca 45228283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 168 - 289
Target Start/End: Original strand, 52761511 - 52761633
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||||||||||||||||| |||||||| || ||| ||||| |||        ||||||||||||||||||||||||||| ||||    
T  52761511 ataaattaggtgttggtgatacactataaaatctgatagacctccgcaatccaacggtctcttttttcaggggattaaaattatcaaaattggaccaaat 52761610  T
Q  267 tgaataaaagaaataagttaagg 289  Q
    |||||||||||||||||||||||    
T  52761611 tgaataaaagaaataagttaagg 52761633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 168 - 371
Target Start/End: Original strand, 47533769 - 47533973
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||||||||||||||||| ||||| ||   ||||| |||| |||         | |||||| |||||||||||||| |  ||||    
T  47533769 ataaattaggtgttggtgatacactataaaatctgatagatctctctaatttaacggtctatttttttggaggattataattatcaaaattgaatcaaat 47533868  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||| || ||||||| ||||| ||||| ||||| |||||||| ||||||||||  ||||| |||||||||||||| ||||| ||||  |||||||||||    
T  47533869 tgaatgaatgaaataatttaagagacgtatttgaaaaagttaaaacttatgggactaaattaaataaaagaaataatttaagagaccagcagatcaatta 47533968  T
Q  367 agact 371  Q
    |||||    
T  47533969 agact 47533973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 302 - 373
Target Start/End: Original strand, 18820806 - 18820877
Alignment:
Q  302 aaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaagacttt 373  Q
    |||||||||| ||||| || ||||||||||||||||||||| |||||||||||  |||||||||||| ||||    
T  18820806 aaagttaagatttatgagaccaaattgaataaaagaaataagttaagggaccggtagatcaattaagccttt 18820877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 21203214 - 21203159
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||    
T  21203214 ataaattaggtgttgatgatacactataaaatctgatagacctttgtaatccaacg 21203159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 292
Target Start/End: Complemental strand, 25181553 - 25181519
Alignment:
Q  258 ggactaaattgaataaaagaaataagttaagggac 292  Q
    |||| ||||||||||||||||||||||||||||||    
T  25181553 ggaccaaattgaataaaagaaataagttaagggac 25181519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 322 - 368
Target Start/End: Original strand, 52761606 - 52761652
Alignment:
Q  322 caaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    ||||||||||||||||||||| |||||| |||| || ||||||||||    
T  52761606 caaattgaataaaagaaataagttaaggaaccggcatatcaattaag 52761652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 292
Target Start/End: Original strand, 18820827 - 18820856
Alignment:
Q  263 aaattgaataaaagaaataagttaagggac 292  Q
    ||||||||||||||||||||||||||||||    
T  18820827 aaattgaataaaagaaataagttaagggac 18820856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 45228737 - 45228698
Alignment:
Q  20 gaagacatgaagattagggttttaaaaagcataatttgatg 60  Q
    ||||||||||||||| ||||||| |||||||||||||||||    
T  45228737 gaagacatgaagattggggtttt-aaaagcataatttgatg 45228698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 123; Significance: 7e-63; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 170 - 368
Target Start/End: Original strand, 35202 - 35401
Alignment:
Q  170 aaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaattg 268  Q
    ||||||||||||| ||||||||| |||||||| |||||||| |||||| ||||| ||||       |||||||||||||||| |||||||||| ||||||    
T  35202 aaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctgtttttttaggggattaaaattataaaaattggaccaaattg 35301  T
Q  269 aataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    | ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||    
T  35302 agtaaaagaaataagttgagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggaccgccagatcaattaag 35401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 170 - 368
Target Start/End: Complemental strand, 31234 - 31035
Alignment:
Q  170 aaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaattg 268  Q
    ||||||||||||| |||||||||||||||||| |||||||| |||||| ||||| ||||       |||||||||||||||| |||| ||||| ||||||    
T  31234 aaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctgtttttttaggggattaaaattataaaaactggaccaaattg 31135  T
Q  269 aataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    | ||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||| |||||||||||||    
T  31134 agtaaaagaaataagttgagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaag 31035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 123; Significance: 7e-63; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 170 - 368
Target Start/End: Complemental strand, 79610 - 79411
Alignment:
Q  170 aaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaattg 268  Q
    ||||||||||||| ||||||||| |||||||| |||||||| |||||| ||||| ||||       |||||||||||||||| |||||||||| ||||||    
T  79610 aaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctgtttttttaggggattaaaattataaaaattggaccaaattg 79511  T
Q  269 aataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    | ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||    
T  79510 agtaaaagaaataagttgagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggaccgccagatcaattaag 79411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 170 - 368
Target Start/End: Original strand, 83578 - 83777
Alignment:
Q  170 aaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaattg 268  Q
    ||||||||||||| |||||||||||||||||| |||||||| |||||| ||||| ||||       |||||||||||||||| |||| ||||| ||||||    
T  83578 aaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctgtttttttaggggattaaaattataaaaactggaccaaattg 83677  T
Q  269 aataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    | ||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||| |||||||||||||    
T  83678 agtaaaagaaataagttgagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaag 83777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 1e-61; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 16602928 - 16602727
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| ||||||||| |||||||| |||||| | |||||| ||||| |||          ||||||||||||||||||||||||| || |    
T  16602928 ataaattaggtgttggtgatacactgtaaaatctgatagacatccgtaatccaacggtcttttttttttagggattaaaattatcaaaattggaccaatt 16602829  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16602828 taaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataaattaagggaccgacagatcaatta 16602729  T
Q  367 ag 368  Q
    ||    
T  16602728 ag 16602727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 239 - 368
Target Start/End: Original strand, 38243942 - 38244071
Alignment:
Q  239 gattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaa 338  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  38243942 gattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagggacgtgtttgaaaaagttaagacttatgggaccaaaatgaataaaagaa 38244041  T
Q  339 ataaattaagggaccgacagatcaattaag 368  Q
    ||||||||||||||||||||||||||||||    
T  38244042 ataaattaagggaccgacagatcaattaag 38244071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 27892251 - 27892452
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||  |||| ||||           ||||||||||||||||||||||  ||||    
T  27892251 ataaattaggtgttggtgatacactataaaatctgatagaccttcgtaatctaacggtctgtttttttttttgattaaaattatcaaaattggatcaaat 27892350  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||| ||||||||||| |||||||||||    
T  27892351 tgaataaaagaaataagttaagggacgtgtctgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaatta 27892450  T
Q  367 ag 368  Q
    ||    
T  27892451 ag 27892452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 173 - 368
Target Start/End: Complemental strand, 23833165 - 23832970
Alignment:
Q  173 ttaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaattgaat 271  Q
    |||||||||||||||||||||||||||||  ||||||| |||||| ||||| |||        |||||||||||||||||||||||||||||||||||||    
T  23833165 ttaggtgttgatgatacactataaaatcttctagacctccgtaatccaacggtcttcttttttaggggattaaaattatcaaaattggactaaattgaat 23833066  T
Q  272 aaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||| ||| ||||||||| |||||||||||||||||||||||||||||| ||||| |||||||| |||||| |||||||||||||| ||||||||||    
T  23833065 aaaataaaaaagttaagg-acgtgtttgagaaagttaagacttatgggaccaaatggaataaaataaataagttaagggaccgacaaatcaattaag 23832970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 237 - 373
Target Start/End: Complemental strand, 26388351 - 26388215
Alignment:
Q  237 gggattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaag 336  Q
    |||||||||||||||||||||| |  ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||     
T  26388351 gggattaaaattatcaaaattgaatcaaattaaataaaagaaataagttaaaggacgtgtttgagaaagttaagacttatgagatcaaattgaataaaaa 26388252  T
Q  337 aaataaattaagggaccgacagatcaattaagacttt 373  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  26388251 aaataagttaagagaccgacagatcaattaagacttt 26388215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 240 - 368
Target Start/End: Complemental strand, 27891236 - 27891108
Alignment:
Q  240 attaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaa 339  Q
    ||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||    
T  27891236 attaaaattatcaaaattgaaccaaaatgaataaaagaaataagttaagggacgtgtttgagaaagttaagacctatgagaccaaattgaataaaagaaa 27891137  T
Q  340 taaattaagggaccgacagatcaattaag 368  Q
    ||| ||||||||||| |||||||||||||    
T  27891136 taagttaagggaccggcagatcaattaag 27891108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 280 - 368
Target Start/End: Original strand, 23833898 - 23833986
Alignment:
Q  280 taagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  23833898 taagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataagttaagggaccggcagatcaattaag 23833986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 258 - 368
Target Start/End: Original strand, 16604195 - 16604305
Alignment:
Q  258 ggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgaca 357  Q
    |||| ||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||  |    
T  16604195 ggaccaaattgaataaaagaaataagttcagggacgtgcttgagaaacttaagacttatgggaccaaattgaataaaagaaataagttaagggaccggta 16604294  T
Q  358 gatcaattaag 368  Q
    |||||||||||    
T  16604295 gatcaattaag 16604305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 263 - 368
Target Start/End: Complemental strand, 43814628 - 43814523
Alignment:
Q  263 aaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatca 362  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||  |||||||||||||||||||| |||||||||||||| ||||    
T  43814628 aaattgaataaaagaaataagttaaaggacgtatttgagaaagttaagacttatgagacgaaattgaataaaagaaataagttaagggaccgacaaatca 43814529  T
Q  363 attaag 368  Q
    ||||||    
T  43814528 attaag 43814523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 282 - 368
Target Start/End: Complemental strand, 5033566 - 5033480
Alignment:
Q  282 agttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||||||||| || |||||||||||||| | |||| ||| ||||||||||||||||||||| |||| |||| |||||||| ||||||    
T  5033566 agttaagggatgtatttgagaaagttaaaagttataggaccaaattgaataaaagaaataagttaaaggactgacagatctattaag 5033480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 38243014 - 38242944
Alignment:
Q  239 gattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaa 309  Q
    ||||||||||||||||||||||  ||||| |||||||||||||||||||| ||| ||||||| ||||||||    
T  38243014 gattaaaattatcaaaattggatcaaattaaataaaagaaataagttaagagacatgtttgaaaaagttaa 38242944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 285 - 368
Target Start/End: Original strand, 19577359 - 19577442
Alignment:
Q  285 taagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    ||||||| || ||||  |||||||||| |||||||| |||||||| |||||||||||| |||||||||||  ||||||||||||    
T  19577359 taagggatgtctttgttaaagttaagagttatgggaccaaattgactaaaagaaataagttaagggaccgggagatcaattaag 19577442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 282 - 368
Target Start/End: Original strand, 5034846 - 5034932
Alignment:
Q  282 agttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||||||||| ||||||||||||||||| | |||| | | |||||| |||||||||||||| |||| |||||| || ||||||||||    
T  5034846 agttaagggatgtgtttgagaaagttaaaagttatagaaccaaattaaataaaagaaataagttaaaggaccggcaaatcaattaag 5034932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 282 - 332
Target Start/End: Complemental strand, 15496133 - 15496083
Alignment:
Q  282 agttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaata 332  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  15496133 agttaagggacgtgtttgtgaaagttaagacttatgggaccaaattgaata 15496083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 367
Target Start/End: Original strand, 43814636 - 43814696
Alignment:
Q  307 taagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaa 367  Q
    |||| |||||| || ||||||||||||||||||||  ||| ||||||||||||||||||||    
T  43814636 taagtcttatgagaccaaattgaataaaagaaatatgttaggggaccgacagatcaattaa 43814696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 43814644 - 43814599
Alignment:
Q  307 taagacttatgggatcaaattgaataaaagaaataaattaagggac 352  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||||    
T  43814644 taagacttatgtgatcaaattgaataaaagaaataagttaaaggac 43814599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 27948846 - 27948903
Alignment:
Q  13 gagagaagaagacatgaagattagggttttaaaaagc----ataatttgatgaagatg 66  Q
    ||||||||||||||| |||||| ||||||||||||||    |||||||||||||||||    
T  27948846 gagagaagaagacataaagattggggttttaaaaagcatatataatttgatgaagatg 27948903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 292
Target Start/End: Original strand, 23833941 - 23833970
Alignment:
Q  263 aaattgaataaaagaaataagttaagggac 292  Q
    ||||||||||||||||||||||||||||||    
T  23833941 aaattgaataaaagaaataagttaagggac 23833970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 27891309 - 27891260
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaat 217  Q
    ||||||||||||||| |||||||||  ||||||| |||||| ||||||||    
T  27891309 ataaattaggtgttggtgatacactggaaaatctgatagacattcgtaat 27891260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 114; Significance: 2e-57; HSPs: 2)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 2941 - 3143
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnagg-ggattaaaattatcaaaattggactaaa 265  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||  |||| ||||           |||||||||||||||||||||||| |||    
T  2941 ataaattaggtgttggtgatacactataaaatctgatagaccttcgtaatctaacggtctgtttttttttttggattaaaattatcaaaattggaccaaa 3040  T
Q  266 ttgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatt 365  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| | ||||||||||    
T  3041 ttgaataaaagaaataagttaagggacgtgtctgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggactggcagatcaatt 3140  T
Q  366 aag 368  Q
    |||    
T  3141 aag 3143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 168 - 292
Target Start/End: Complemental strand, 1971 - 1847
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||||||||  |||||||||||||| ||||||||  |||| |||           ||||||||||||| |||||||||| ||||    
T  1971 ataaattaggtgttggtgatacactggaaaatctaatagacattcgtaatctaacggtctatattttttttggattaaaattat-aaaattggaccaaat 1873  T
Q  267 tgaataaaagaaataagttaagggac 292  Q
    ||||||||||||||||||||||||||    
T  1872 tgaataaaagaaataagttaagggac 1847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 6e-57; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 9244268 - 9244067
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||||||||||||||||| |||||||| |||||| | ||| |||        | |||||||||||||||||||||| || ||||    
T  9244268 ataaattaggtgttggtgatacactataaaatctgatagacctccgtaatcctacggtctcattttttaagggattaaaattatcaaaattgaaccaaat 9244169  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||  |||||||||||    
T  9244168 tgaataaaataaataagttaagggacgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccagcagatcaatta 9244069  T
Q  367 ag 368  Q
    ||    
T  9244068 ag 9244067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 239 - 368
Target Start/End: Complemental strand, 43584539 - 43584410
Alignment:
Q  239 gattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaa 338  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  43584539 gattaaaattatcaaaattggatcaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagatcaaattgaataaaagaa 43584440  T
Q  339 ataaattaagggaccgacagatcaattaag 368  Q
    |||| |||| ||||||||||||||||||||    
T  43584439 ataagttaatggaccgacagatcaattaag 43584410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 522012 - 522213
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaac-gtctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    |||||||||| |||| |||||||||||||||| | |||||||| |||||| |||| ||||        ||||||||||||||||||||||| ||  ||||    
T  522012 ataaattaggggttggtgatacactataaaatttgatagacctccgtaatccaacagtctctttttctaggggattaaaattatcaaaattagatcaaat 522111  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||| |||||    
T  522112 tgaataaaataaataagttaagggacatgtttgagaaagttaagacttatggaaccaaattgaataaaagaaataagttaagggaccgacagattaatta 522211  T
Q  367 ag 368  Q
    ||    
T  522212 ag 522213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 26364944 - 26364743
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| ||||||| |||||||||| ||||||||  ||||| ||||| |||        || |||||||||||||||||||||||  ||||    
T  26364944 ataaattaggtgttggtgatacattataaaatctgatagacctctgtaatccaacggtctctttttttagaggattaaaattatcaaaattggatcaaat 26364845  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||| |||||||||||    
T  26364844 tgaataaaagaaataagttaaaggatgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaatta 26364745  T
Q  367 ag 368  Q
    ||    
T  26364744 ag 26364743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 9245346 - 9245548
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||||||||||||||||| ||||||||  | ||| ||||| |||        |||||||||||||||| |||||||||||||||    
T  9245346 ataaattaggtgttggtgatacactataaaatctgatagacctcagcaatccaacggtctctttttttaggggattaaaattataaaaattggactaaat 9245445  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaatt-aagggaccgacagatcaatt 365  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || || |||||| ||||||| ||    
T  9245446 tgaataaaataaataaattaagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaaaaggaccggcagatcattt 9245545  T
Q  366 aag 368  Q
    |||    
T  9245546 aag 9245548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 168 - 374
Target Start/End: Complemental strand, 34642867 - 34642661
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacgtctgnnnnnnnaggggattaaaattatcaaaattggactaaatt 267  Q
    ||||||||| ||||| ||||| |||||||||||| |||||||| || ||| |||||  |        |||||||||||||||||||||||  || |||||    
T  34642867 ataaattagatgttggtgatatactataaaatctgatagacctccgcaatccaacggttttttttttaggggattaaaattatcaaaattaaaccaaatt 34642768  T
Q  268 gaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaa 367  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||| ||||| ||||| ||||||||||||    
T  34642767 gaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatatgaccaaattgaataaaagaaataagttaagagaccggcagatcaattaa 34642668  T
Q  368 gacttta 374  Q
    | |||||    
T  34642667 gtcttta 34642661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 168 - 367
Target Start/End: Original strand, 30644620 - 30644819
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||| || |||||||| | |||||||| |||||| ||||| |||        || |||||||||||||||||||||||  ||||    
T  30644620 ataaattaggtgttggtgatccattataaaatttgatagacctccgtaatccaacggtct-cttttttagaggattaaaattatcaaaattggatcaaat 30644718  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||| ||||||||||||||||    
T  30644719 tgaataaaagaaataagttaagagacgtgtttgagaaagttaagatttatgggaccaaattaaataaaagaaataaattaaggaaccgacagatcaatta 30644818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 235 - 368
Target Start/End: Original strand, 41638135 - 41638268
Alignment:
Q  235 aggggattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaa 334  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||  ||||||||||||    
T  41638135 aggggattaaaattattaaaattggaccaaattgaataaaagaaataagttaaaggacatgtttgagaaagttaagacttatgagaataaattgaataaa 41638234  T
Q  335 agaaataaattaagggaccgacagatcaattaag 368  Q
    |||||||| ||||||||||| |||||||||||||    
T  41638235 agaaataagttaagggaccggcagatcaattaag 41638268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 20309126 - 20308925
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||| ||| |||||||||||||||||| ||||||||  || || ||||| |||        ||||||| ||||||||||||||||||| ||||    
T  20309126 ataaattaggtattggtgatacactataaaatctgatagacctcagtgatccaacggtctctttttctaggggatcaaaattatcaaaattggaccaaat 20309027  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||  ||||| |||||||||||||||||||||||||| ||||||||||   ||||||||||||||||||| ||||||||||| |||||||||||    
T  20309026 tgaataaaaacaataaattaagggacgtgtttgagaaagttaaaacttatgggactcaattgaataaaagaaataagttaagggaccggcagatcaatta 20308927  T
Q  367 ag 368  Q
    ||    
T  20308926 ag 20308925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 21095759 - 21095558
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||| ||| |||||||||||||||||| ||||||||  || || ||||| |||        ||||||| ||||||||||||||||||| ||||    
T  21095759 ataaattaggtattggtgatacactataaaatctgatagacctcagtgatccaacggtctctttttctaggggatcaaaattatcaaaattggaccaaat 21095660  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||  ||||| |||||||||||||||||||||||||| ||||||||||   ||||||||||||||||||| ||||||||||| |||||||||||    
T  21095659 tgaataaaaacaataaattaagggacgtgtttgagaaagttaaaacttatgggactcaattgaataaaagaaataagttaagggaccggcagatcaatta 21095560  T
Q  367 ag 368  Q
    ||    
T  21095559 ag 21095558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 168 - 368
Target Start/End: Complemental strand, 41637034 - 41636833
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||||||| ||||||||| |||||| | |||||| ||||| |||        |||||||||||||||| ||| |||||| ||||    
T  41637034 ataaattaggtgttggtgatacacgataaaatctgatagacttccgtaatccaacggtctctttttttaggggattaaaattataaaagttggaccaaat 41636935  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||| | || |||||| || ||||||||    
T  41636934 tgaataaaagaaataaattaagggacgtgttttagaaagttaagacttatgggaccaaattgaatgaaagaaataagtaaaaggaccggcaaatcaatta 41636835  T
Q  367 ag 368  Q
    ||    
T  41636834 ag 41636833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 168 - 367
Target Start/End: Complemental strand, 30641000 - 30640801
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    ||||||||||||||| |||||||||||||||| | |||||||| |||||| ||||| |||        |||||||||||||||| |||||||||  ||||    
T  30641000 ataaattaggtgttggtgatacactataaaatttgatagacctccgtaatccaacggtctctttttttaggggattaaaattattaaaattggatcaaat 30640901  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    ||||||||||||||||||||| | |||||||||| || ||||| |||||||||| ||||||||||||||||||||| |||| |||||| || ||||||||    
T  30640900 tgaataaaagaaataagttaatg-acgtgtttgataaggttaaaacttatgggaccaaattgaataaaagaaataagttaaaggaccggcatatcaatta 30640802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 235 - 368
Target Start/End: Original strand, 34643943 - 34644075
Alignment:
Q  235 aggggattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaa 334  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||| ||||  || ||||||||||||||||||| |||||||| |||||||||||||    
T  34643943 aggggattaaaattatcaaaattgaactaaattaaataaaagaaataaattaatagaggtgtttgagaaagttaagatttatggga-caaattgaataaa 34644041  T
Q  335 agaaataaattaagggaccgacagatcaattaag 368  Q
    |||||||| | ||||||||||| |||||||||||    
T  34644042 agaaataagtcaagggaccgacggatcaattaag 34644075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 168 - 368
Target Start/End: Original strand, 26366109 - 26366310
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaat 266  Q
    |||||||| |||||| ||||||||||||||||||||||||||| ||||||  |||| |||        |||||||||||||||| |||| ||||| ||||    
T  26366109 ataaattatgtgttggtgatacactataaaatctaatagacctccgtaatctaacggtctttttttttaggggattaaaattattaaaaatggaccaaat 26366208  T
Q  267 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaatta 366  Q
    |||||||||||||||||||| || || ||||||| || |||||||||||||  | |||||| |||||||||||||| |||| ||| || |||||||||||    
T  26366209 tgaataaaagaaataagttatggaacatgtttgataaggttaagacttatgaaaccaaattaaataaaagaaataagttaaaggatcggcagatcaatta 26366308  T
Q  367 ag 368  Q
    ||    
T  26366309 ag 26366310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 237 - 352
Target Start/End: Original strand, 20310037 - 20310152
Alignment:
Q  237 gggattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaag 336  Q
    |||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||| |||||||||||| || |||| ||||||||||    
T  20310037 gggattaaaattatcaaaattgaaccaaatcgaataaaagaaataagttaagggacgtgtttgagaaacttaagacttatgagaccaaaatgaataaaag 20310136  T
Q  337 aaataaattaagggac 352  Q
    |||||| |||||||||    
T  20310137 aaataagttaagggac 20310152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 237 - 352
Target Start/End: Original strand, 21096670 - 21096785
Alignment:
Q  237 gggattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaag 336  Q
    |||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||| |||||||||||| || |||| ||||||||||    
T  21096670 gggattaaaattatcaaaattgaaccaaatcgaataaaagaaataagttaagggacgtgtttgagaaacttaagacttatgagaccaaaatgaataaaag 21096769  T
Q  337 aaataaattaagggac 352  Q
    |||||| |||||||||    
T  21096770 aaataagttaagggac 21096785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 238 - 367
Target Start/End: Original strand, 43585930 - 43586059
Alignment:
Q  238 ggattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaaga 337  Q
    ||||||||||||| |||||||||  |||||||||||| ||||||| ||||  ||| ||||||||||| |||||||||||| ||||||||| |||||||||    
T  43585930 ggattaaaattattaaaattggatcaaattgaataaatgaaataatttaatagacatgtttgagaaaattaagacttatgagatcaaattaaataaaaga 43586029  T
Q  338 aataaattaagggaccgacagatcaattaa 367  Q
    ||||| ||||||||||||||||||||||||    
T  43586030 aataagttaagggaccgacagatcaattaa 43586059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 268 - 368
Target Start/End: Complemental strand, 31203068 - 31202968
Alignment:
Q  268 gaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaa 367  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||| |||||||||||||||| |||||| | |||||||| ||||||    
T  31203068 gaataaaagaaataagttaagggacgtgtttgagaaacttaagatttatgggaccaaaatgaataaaagaaataagttaaggaaacgacagattaattaa 31202969  T
Q  368 g 368  Q
    |    
T  31202968 g 31202968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 282 - 368
Target Start/End: Original strand, 3714550 - 3714636
Alignment:
Q  282 agttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||| |||| |||||||||||||    
T  3714550 agttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaaggaaccggcagatcaattaag 3714636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 282 - 368
Target Start/End: Original strand, 43134079 - 43134165
Alignment:
Q  282 agttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||||||||| |||||| |||||||||| | |||| ||| ||||||||||||||||||||| |||| ||||||||| ||||||||||    
T  43134079 agttaagggatgtgtttaagaaagttaaaagttataggaccaaattgaataaaagaaataagttaaaggaccgacatatcaattaag 43134165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 282 - 368
Target Start/End: Complemental strand, 3713149 - 3713065
Alignment:
Q  282 agttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||||||||| ||||||||||||||||| |||||| | | |||||| |||||||||||| ||||||| |||||||||||||||||||    
T  3713149 agttaagggatgtgtttgagaaagttaaaacttat-gaaccaaattaaataaaagaaat-aattaagagaccgacagatcaattaag 3713065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 26365844 - 26365890
Alignment:
Q  13 gagagaagaagacatgaagattagggttttaaaaagcataatttgatg 60  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||    
T  26365844 gagagaagaagacatgaagattggggtttt-aaaagcataatttgatg 26365890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 368
Target Start/End: Complemental strand, 22012225 - 22012159
Alignment:
Q  302 aaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||||||||| ||||| || |||| ||||  |||||||||| ||||||||||||||| |||||||||    
T  22012225 aaagttaagagttatgagaccaaactgaaataaagaaataagttaagggaccgacagttcaattaag 22012159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 43585860 - 43585909
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaat 217  Q
    ||||||||||| |||||||||||||||||||| |  ||||||||| ||||    
T  43585860 ataaattaggtattgatgatacactataaaatatggtagaccttcataat 43585909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1425 (Bit Score: 100; Significance: 4e-49; HSPs: 2)
Name: scaffold1425
Description:

Target: scaffold1425; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 237 - 368
Target Start/End: Original strand, 1586 - 1717
Alignment:
Q  237 gggattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaag 336  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||| |||| |||||||||||||||||||||||||||||| | |||||||||||||||    
T  1586 gggattaaaattatcaaaattggaccaaattgaataaaggaaataaattaaaggacgtgtttgagaaagttaagacttatggaaccaaattgaataaaag 1685  T
Q  337 aaataaattaagggaccgacagatcaattaag 368  Q
    |||||| ||||||||||| |||||||||||||    
T  1686 aaataagttaagggaccggcagatcaattaag 1717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1425; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 170 - 368
Target Start/End: Complemental strand, 335 - 136
Alignment:
Q  170 aaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg-tctgnnnnnnnaggggattaaaattatcaaaattggactaaattg 268  Q
    ||||||||||||| |||||| || |||||||| ||||||||  ||||| ||||| |||        | || |||||||||||||||||| ||| ||||||    
T  335 aaattaggtgttggtgatacgctgtaaaatctgatagacctctgtaatccaacggtctctttttttaaggaattaaaattatcaaaatttgaccaaattg 236  T
Q  269 aataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaag 368  Q
    |||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||    
T  235 aataaaggaaataaattaaaggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataagttaagggactggcagatcaattaag 136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 98; Significance: 6e-48; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 239 - 368
Target Start/End: Original strand, 25332 - 25461
Alignment:
Q  239 gattaaaattatcaaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaa 338  Q
    ||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  25332 gattaaaattatcaaaattggaccaaatttaataaaagaaataaattaagggacgtgtttgagaaagttaagacttatgtgaccaaattgaataaaagaa 25431  T
Q  339 ataaattaagggaccgacagatcaattaag 368  Q
    |||| |||||||| || |||||||||||||    
T  25432 ataagttaagggagcggcagatcaattaag 25461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 25259 - 25313
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaac 222  Q
    ||||||||||||||||| |||||||||||||| | ||| |||| |||||| ||||    
T  25259 ataaattaggtgttgataatacactataaaatgtgataaacctccgtaatccaac 25313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 81; Significance: 8e-38; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 264 - 368
Target Start/End: Complemental strand, 104407 - 104303
Alignment:
Q  264 aattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaa 363  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||| ||||||||||| || |||||    
T  104407 aattgaataaaagaaataagttaagggacgtgtttgagaatgttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccgtcaaatcaa 104308  T
Q  364 ttaag 368  Q
    |||||    
T  104307 ttaag 104303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 104454 - 104404
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaatt 218  Q
    ||||||||| ||||| |||||||||||||||||| |||||||| |||||||    
T  104454 ataaattagatgttggtgatacactataaaatctgatagacctccgtaatt 104404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 292
Target Start/End: Complemental strand, 104353 - 104319
Alignment:
Q  258 ggactaaattgaataaaagaaataagttaagggac 292  Q
    |||| ||||||||||||||||||||||||||||||    
T  104353 ggaccaaattgaataaaagaaataagttaagggac 104319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 9360 - 9305
Alignment:
Q  168 ataaattaggtgttgatgatacactataaaatctaatagaccttcgtaattcaacg 223  Q
    ||||||||||||||| |||||||||||||||||| |||||||| |||||| |||||    
T  9360 ataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacg 9305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University