View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16554_low_124 (Length: 211)
Name: NF16554_low_124
Description: NF16554
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16554_low_124 |
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Alignment Details
Target: chr6 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 33757028 - 33757224
Alignment:
| Q |
1 |
ccggcatccgtagaaaatctaataaaccaaatatgcgtgaaacaatcacagccaccactcgatccttcaacgatacgactcctcgcaacgatggcagaaa |
100 |
Q |
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| T |
33757028 |
ccggcatccgtagaaaatctaataaaccaaatatgcgtgaaacaatcacaaccaccactcgatccttcaacgatacgactcctcgcaacgatggcagaaa |
33757127 |
T |
|
| Q |
101 |
atcaagctcttcaaattctcaatgttatttccaatacaccaattcgaaccacttttaatgctttcactctcttcatgattaataaacattcttctca |
197 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33757128 |
atcaagctcttcaaattctcaatgttatttccaatacaccaattcgaaccacttttaatgctttcactctcttcatgattaataaacattcttctca |
33757224 |
T |
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