View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16554_low_71 (Length: 333)

Name: NF16554_low_71
Description: NF16554
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16554_low_71
NF16554_low_71
[»] chr6 (18 HSPs)
chr6 (134-333)||(6248724-6248923)
chr6 (136-326)||(13640811-13641000)
chr6 (139-333)||(24556538-24556734)
chr6 (135-333)||(33248062-33248260)
chr6 (134-322)||(10667576-10667765)
chr6 (165-330)||(26244241-26244406)
chr6 (134-273)||(6228057-6228196)
chr6 (147-333)||(9952682-9952868)
chr6 (137-257)||(33011728-33011848)
chr6 (147-327)||(5331137-5331316)
chr6 (134-283)||(24073476-24073623)
chr6 (138-239)||(5167280-5167382)
chr6 (134-238)||(10265696-10265800)
chr6 (19-66)||(6248609-6248656)
chr6 (137-333)||(33614532-33614730)
chr6 (134-239)||(33599339-33599446)
chr6 (138-238)||(2803933-2804033)
chr6 (295-333)||(6228374-6228412)
[»] chr5 (48 HSPs)
chr5 (135-333)||(36439917-36440115)
chr5 (134-327)||(19297984-19298177)
chr5 (134-333)||(6391366-6391564)
chr5 (134-333)||(42108520-42108719)
chr5 (139-333)||(16885452-16885647)
chr5 (136-333)||(40201751-40201950)
chr5 (135-333)||(38876626-38876825)
chr5 (138-333)||(40514768-40514965)
chr5 (137-269)||(32906886-32907018)
chr5 (135-333)||(11422538-11422738)
chr5 (147-333)||(14830597-14830783)
chr5 (137-333)||(28207234-28207436)
chr5 (159-333)||(15530089-15530263)
chr5 (164-329)||(8570178-8570345)
chr5 (164-333)||(35319300-35319469)
chr5 (178-333)||(12580077-12580232)
chr5 (164-333)||(41386881-41387050)
chr5 (186-333)||(16844483-16844630)
chr5 (134-333)||(40417260-40417464)
chr5 (135-269)||(22859579-22859713)
chr5 (178-327)||(333701-333850)
chr5 (137-269)||(10623605-10623733)
chr5 (134-271)||(29571151-29571288)
chr5 (182-333)||(39981621-39981773)
chr5 (137-333)||(28022742-28022942)
chr5 (141-238)||(817758-817855)
chr5 (143-239)||(18731042-18731138)
chr5 (148-220)||(41237237-41237309)
chr5 (154-238)||(8689202-8689285)
chr5 (135-322)||(17742813-17743008)
chr5 (164-267)||(21961557-21961660)
chr5 (147-189)||(333861-333903)
chr5 (159-238)||(25606303-25606382)
chr5 (137-189)||(12580011-12580065)
chr5 (196-238)||(15577928-15577970)
chr5 (147-189)||(16844422-16844464)
chr5 (138-223)||(39964026-39964112)
chr5 (137-189)||(41873128-41873182)
chr5 (136-205)||(9190402-9190470)
chr5 (137-186)||(11873606-11873655)
chr5 (135-200)||(29090026-29090091)
chr5 (141-237)||(3010322-3010417)
chr5 (140-230)||(11789740-11789830)
chr5 (135-169)||(15577986-15578020)
chr5 (135-169)||(22658531-22658565)
chr5 (248-333)||(39963938-39964021)
chr5 (177-238)||(18988628-18988689)
chr5 (186-242)||(41873203-41873259)
[»] chr4 (33 HSPs)
chr4 (135-327)||(4576593-4576785)
chr4 (134-327)||(11432361-11432554)
chr4 (134-333)||(32519730-32519930)
chr4 (137-333)||(6892933-6893129)
chr4 (177-333)||(34510386-34510542)
chr4 (134-307)||(22320004-22320177)
chr4 (137-333)||(4435150-4435346)
chr4 (134-309)||(41819178-41819365)
chr4 (161-333)||(7912885-7913057)
chr4 (137-333)||(55957521-55957717)
chr4 (138-327)||(43024608-43024797)
chr4 (211-333)||(23620919-23621040)
chr4 (134-258)||(56092241-56092365)
chr4 (135-246)||(6828946-6829056)
chr4 (135-246)||(26660211-26660322)
chr4 (137-333)||(37243960-37244157)
chr4 (147-333)||(50153707-50153893)
chr4 (143-269)||(30920271-30920397)
chr4 (136-213)||(36706381-36706458)
chr4 (177-309)||(32526407-32526539)
chr4 (134-221)||(33051850-33051935)
chr4 (136-303)||(10183690-10183866)
chr4 (164-269)||(39721994-39722099)
chr4 (139-202)||(12154200-12154265)
chr4 (148-333)||(52973696-52973880)
chr4 (135-273)||(37665881-37666023)
chr4 (139-238)||(29145608-29145707)
chr4 (140-213)||(42894671-42894738)
chr4 (178-238)||(38303766-38303826)
chr4 (187-238)||(27292375-27292426)
chr4 (251-306)||(36105785-36105840)
chr4 (177-210)||(25592350-25592383)
chr4 (134-238)||(50528733-50528836)
[»] chr8 (44 HSPs)
chr8 (134-333)||(2062547-2062746)
chr8 (134-333)||(38995998-38996197)
chr8 (134-333)||(44602020-44602219)
chr8 (134-303)||(2510494-2510663)
chr8 (134-333)||(40691168-40691365)
chr8 (135-333)||(30469374-30469576)
chr8 (137-327)||(10811901-10812092)
chr8 (137-333)||(2374284-2374480)
chr8 (135-333)||(9617301-9617496)
chr8 (134-333)||(25107300-25107494)
chr8 (175-333)||(21019757-21019915)
chr8 (134-327)||(1222238-1222431)
chr8 (134-333)||(10710023-10710220)
chr8 (135-333)||(22738601-22738801)
chr8 (137-333)||(660806-661002)
chr8 (134-273)||(2620097-2620236)
chr8 (134-327)||(39139353-39139547)
chr8 (137-333)||(31955608-31955804)
chr8 (134-273)||(16998016-16998156)
chr8 (137-273)||(44652475-44652610)
chr8 (137-273)||(3457813-3457947)
chr8 (200-333)||(31587920-31588053)
chr8 (137-221)||(255030-255114)
chr8 (137-221)||(846542-846626)
chr8 (139-209)||(39628724-39628794)
chr8 (139-209)||(39638274-39638344)
chr8 (136-268)||(12942227-12942359)
chr8 (135-213)||(35458902-35458980)
chr8 (134-207)||(31587836-31587909)
chr8 (201-269)||(17006390-17006458)
chr8 (201-269)||(17570790-17570858)
chr8 (163-236)||(9552626-9552699)
chr8 (266-333)||(2621410-2621477)
chr8 (135-186)||(21019928-21019978)
chr8 (264-333)||(17988962-17989031)
chr8 (177-269)||(18020142-18020234)
chr8 (175-333)||(19972918-19973076)
chr8 (164-235)||(45322419-45322490)
chr8 (263-333)||(9552510-9552580)
chr8 (177-238)||(37326130-37326191)
chr8 (280-333)||(40554397-40554450)
chr8 (147-207)||(11954307-11954367)
chr8 (135-234)||(38729118-38729222)
chr8 (181-233)||(40554293-40554345)
[»] chr7 (34 HSPs)
chr7 (137-331)||(39727242-39727436)
chr7 (134-330)||(25685299-25685495)
chr7 (134-333)||(42672763-42672962)
chr7 (135-333)||(32420356-32420554)
chr7 (137-273)||(18330704-18330840)
chr7 (147-307)||(21144430-21144590)
chr7 (134-333)||(9271151-9271350)
chr7 (134-333)||(28031895-28032094)
chr7 (141-333)||(9479289-9479480)
chr7 (137-273)||(38175752-38175888)
chr7 (135-319)||(41015720-41015906)
chr7 (180-333)||(32555700-32555853)
chr7 (137-333)||(40727058-40727254)
chr7 (137-302)||(18879575-18879741)
chr7 (137-269)||(41937681-41937814)
chr7 (139-270)||(18793708-18793842)
chr7 (202-333)||(5034095-5034228)
chr7 (134-238)||(32684329-32684433)
chr7 (134-327)||(42808900-42809091)
chr7 (134-309)||(42766503-42766677)
chr7 (139-330)||(34653826-34654018)
chr7 (137-244)||(25072778-25072884)
chr7 (134-273)||(28248911-28249051)
chr7 (147-269)||(44736570-44736692)
chr7 (134-271)||(22541313-22541450)
chr7 (193-271)||(10577621-10577699)
chr7 (135-238)||(22165926-22166031)
chr7 (135-238)||(22224633-22224738)
chr7 (135-244)||(37155492-37155601)
chr7 (134-326)||(38566627-38566819)
chr7 (134-169)||(29706953-29706988)
chr7 (137-212)||(36576141-36576215)
chr7 (156-212)||(651592-651648)
chr7 (177-221)||(37034433-37034477)
[»] chr1 (44 HSPs)
chr1 (134-333)||(51370214-51370416)
chr1 (134-333)||(30562272-30562471)
chr1 (134-333)||(16010523-16010722)
chr1 (135-333)||(4362200-4362398)
chr1 (134-323)||(27089705-27089897)
chr1 (137-333)||(45756110-45756306)
chr1 (177-333)||(8424392-8424548)
chr1 (137-333)||(11751538-11751733)
chr1 (154-333)||(7287148-7287327)
chr1 (137-333)||(25412199-25412396)
chr1 (139-327)||(45377810-45377999)
chr1 (134-317)||(20953031-20953217)
chr1 (137-333)||(47295625-47295825)
chr1 (135-273)||(1825095-1825235)
chr1 (137-257)||(6136034-6136154)
chr1 (134-333)||(2759015-2759214)
chr1 (134-321)||(39737311-39737497)
chr1 (134-309)||(45339100-45339277)
chr1 (137-273)||(41157932-41158069)
chr1 (137-333)||(46998086-46998279)
chr1 (137-231)||(3022704-3022799)
chr1 (159-325)||(642623-642789)
chr1 (147-333)||(4441093-4441280)
chr1 (147-221)||(3839238-3839312)
chr1 (135-269)||(22863313-22863447)
chr1 (194-333)||(10157958-10158098)
chr1 (137-238)||(4402109-4402210)
chr1 (193-273)||(37696600-37696680)
chr1 (135-238)||(35718518-35718623)
chr1 (138-213)||(3532785-3532860)
chr1 (138-238)||(45621527-45621627)
chr1 (134-185)||(37696189-37696240)
chr1 (157-309)||(65149-65305)
chr1 (139-209)||(11862680-11862750)
chr1 (134-209)||(28397533-28397604)
chr1 (233-333)||(3839338-3839438)
chr1 (138-213)||(14346170-14346245)
chr1 (177-271)||(35879688-35879782)
chr1 (137-333)||(17391566-17391763)
chr1 (146-238)||(23981326-23981418)
chr1 (137-173)||(642567-642604)
chr1 (136-221)||(23757182-23757267)
chr1 (183-227)||(17616978-17617022)
chr1 (161-309)||(18379174-18379321)
[»] chr3 (20 HSPs)
chr3 (147-333)||(9503826-9504012)
chr3 (141-307)||(20601619-20601786)
chr3 (135-333)||(21523722-21523921)
chr3 (137-327)||(51880168-51880359)
chr3 (134-333)||(22990509-22990712)
chr3 (137-332)||(27048570-27048765)
chr3 (134-301)||(29563555-29563721)
chr3 (162-333)||(29697486-29697657)
chr3 (134-332)||(43464417-43464612)
chr3 (137-327)||(11836820-11837010)
chr3 (177-327)||(45613148-45613298)
chr3 (135-238)||(52426396-52426499)
chr3 (135-213)||(33458533-33458611)
chr3 (135-333)||(36159173-36159372)
chr3 (134-221)||(44045648-44045735)
chr3 (135-210)||(29719749-29719824)
chr3 (138-269)||(44890725-44890856)
chr3 (141-238)||(36195486-36195583)
chr3 (199-307)||(43946648-43946756)
chr3 (135-207)||(55449269-55449341)
[»] chr2 (24 HSPs)
chr2 (136-333)||(9730140-9730336)
chr2 (134-333)||(16054969-16055171)
chr2 (136-332)||(5442948-5443142)
chr2 (137-327)||(9716188-9716379)
chr2 (137-333)||(4816608-4816805)
chr2 (153-333)||(38556413-38556593)
chr2 (137-333)||(5880238-5880437)
chr2 (139-327)||(10057234-10057425)
chr2 (135-333)||(43898074-43898275)
chr2 (137-273)||(1845301-1845438)
chr2 (134-333)||(13559956-13560154)
chr2 (135-333)||(5712455-5712653)
chr2 (137-333)||(16735056-16735251)
chr2 (137-239)||(39848433-39848535)
chr2 (134-237)||(7599035-7599134)
chr2 (139-215)||(12848673-12848750)
chr2 (149-333)||(32700615-32700799)
chr2 (137-239)||(16202012-16202117)
chr2 (146-213)||(27023472-27023539)
chr2 (135-237)||(1706769-1706869)
chr2 (137-213)||(26714041-26714116)
chr2 (134-212)||(44239613-44239693)
chr2 (164-271)||(12677727-12677837)
chr2 (185-333)||(29037697-29037840)
[»] scaffold0330 (1 HSPs)
scaffold0330 (134-333)||(10876-11076)
[»] scaffold0373 (1 HSPs)
scaffold0373 (135-246)||(7364-7474)
[»] scaffold0036 (1 HSPs)
scaffold0036 (167-309)||(52975-53117)
[»] scaffold0003 (1 HSPs)
scaffold0003 (137-327)||(324844-325034)


Alignment Details
Target: chr6 (Bit Score: 184; Significance: 1e-99; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 134 - 333
Target Start/End: Original strand, 6248724 - 6248923
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6248724 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaagatattgtcaaattctc 6248823  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6248824 taaaacctcatgttgattatcaaaatagagtttaatctaactgatatattaattcgccagtctatttaaacttagacaacattgcttatttaaatatgtt 6248923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 136 - 326
Target Start/End: Complemental strand, 13641000 - 13640811
Alignment:
Q  136 gtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctcta 235  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||    
T  13641000 gtaatttaagcttattagtatacattaattttttacatatataaatgtattattataaactagaattgaaatatgatacaacatattgtcaaattcccta 13640901  T
Q  236 aaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaa 326  Q
    |||||||||||  |||||||||| |||||||||| ||| || | ||||| || |  |||||||| ||||||| |  |||||||||||||||    
T  13640900 aaacctcatgttaattatcaaaa-agagtttaatttaattgatttattagttagctagtctattaaaacttatatcacattgcttatttaa 13640811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 139 - 333
Target Start/End: Original strand, 24556538 - 24556734
Alignment:
Q  139 atttaagctt-attagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaa 237  Q
    |||||||||| ||||||||| ||||||||||||||| |||||| |||||||||| ||||| ||||||||||||||||||||||| ||| ||||| |||||    
T  24556538 atttaagctttattagtatatattaattttttgcatatataaacgtattattataaactaaaattgaaatatgatacaatatatagtcgaattccctaaa 24556637  T
Q  238 acctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaac-ttagacaacattgcttatttaaatatgtt 333  Q
    ||||| ||| ||||||||||| |||||||||||||| ||   ||||| ||||  ||||||||||||| |||||  |||||||||||||||| |||||    
T  24556638 acctcgtgttgattatcaaaagagagtttaatctaattgaactattagttcgctagtctatttaaactttagatcacattgcttatttaaagatgtt 24556734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 135 - 333
Target Start/End: Complemental strand, 33248260 - 33248062
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctct 234  Q
    ||||||||||||||||||||||| ||||||||||||||| | ||||||||||| ||| |||||||| ||||||||||||||||||||  |||||||   |    
T  33248260 agtaatttaagcttattagtataaattaattttttgcatatttaaatgtattagtataaactagaactgaaatatgatacaatatataatcaaatttctt 33248161  T
Q  235 aaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    |||| |||||||  |||||||||| |||||||||| ||| || ||| ||| || || |||||||||| ||||||| ||||||||  ||| |||||||||    
T  33248160 aaaaactcatgttaattatcaaaagagagtttaatttaattgatatcttagtttgttagtctatttacacttagataacattgcaaattgaaatatgtt 33248062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 134 - 322
Target Start/End: Complemental strand, 10667765 - 10667576
Alignment:
Q  134 cagtaatttaagcttattagtatacattaatttttt-gcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattct 232  Q
    |||||||||||||||||||||||||||||||||||| |||| | |||||||||| |||| |||||||||||||||||| |||||||||| ||||||||      
T  10667765 cagtaatttaagcttattagtatacattaatttttttgcatatttaaatgtattgttataaactagaattgaaatatggtacaatatatagtcaaatttc 10667666  T
Q  233 ctaaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttat 322  Q
    ||||||  |||||| || |||||||| |||||||| ||||| || | ||| | || |  ||||||||||||||||||  ||||| |||||    
T  10667665 ctaaaaattcatgttgaatatcaaaagagagtttattctaattgatctatgagtttgctagtctatttaaacttagatcacattacttat 10667576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 165 - 330
Target Start/End: Original strand, 26244241 - 26244406
Alignment:
Q  165 tttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaatagagt 264  Q
    |||| |||| ||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||  ||||| || |||| ||||||||||| | |||    
T  26244241 ttttcgcatatataaatgtattattataaactaaaattgaaatatgatacaatatatagtcaaattccgtaaaaactaatgttgattatcaaaagatagt 26244340  T
Q  265 ttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatat 330  Q
    ||||||||| || | ||||| |||   | |||||| |||||||||  |||||||||||||||||||    
T  26244341 ttaatctaattgatttattagttcactaatctattgaaacttagatcacattgcttatttaaatat 26244406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 134 - 273
Target Start/End: Original strand, 6228057 - 6228196
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    ||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||| ||||| ||||||||||| |||||||||||  ||| ||||      
T  6228057 cagtaatttaaacttattagtatacattaatttttcgcatatataaatgtattattataaactataattgaaatattatacaatatatattcagattcct 6228156  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaa 273  Q
    ||||| ||  ||| |||||| |||| ||||||||||||||    
T  6228157 taaaaacttgtgttgattattaaaagagagtttaatctaa 6228196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 147 - 333
Target Start/End: Original strand, 9952682 - 9952868
Alignment:
Q  147 ttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgt 246  Q
    |||||||| || || | |||||||||| ||||||||||||||||| ||||||||||||||||| || |||||||| ||| ||||  |||||| ||| |||    
T  9952682 ttattagtttaaataatttttttgcatatataaatgtattattataaactagaattgaaatattatgcaatatatagtcgaatttcctaaaatctcgtgt 9952781  T
Q  247 cgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
     ||||||||||| |||||||||||||| ||   ||||| ||||  |||| |||||||| ||||  |||||| ||||||||| |||||    
T  9952782 tgattatcaaaagagagtttaatctaattgaactattagttcggtagtccatttaaacgtagatcacattgtttatttaaagatgtt 9952868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 33011848 - 33011728
Alignment:
Q  137 taatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaa 236  Q
    |||||||||||||||||||| |||||| |||| |||| ||||||||||| ||||| ||||||||||||||||||||| |||||||  ||||||||  |||    
T  33011848 taatttaagcttattagtatgcattaacttttcgcatatataaatgtatcattataaactagaattgaaatatgatataatatatgatcaaattccgtaa 33011749  T
Q  237 aacctcatgtcgattatcaaa 257  Q
    || ||||||| ||||||||||    
T  33011748 aaactcatgttgattatcaaa 33011728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 147 - 327
Target Start/End: Original strand, 5331137 - 5331316
Alignment:
Q  147 ttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgt 246  Q
    ||||||||||||||||||||||||||| ||||||||||||||||  | ||||||| ||||||||||||||||||| ||  ||||  |||||||||  |||    
T  5331137 ttattagtatacattaattttttgcatatataaatgtattattagaagctagaatagaaatatgatacaatatatagttgaatttcctaaaaccttgtgt 5331236  T
Q  247 cgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaa 327  Q
     || ||| |||| ||| |||||||||| |    ||||| ||||| |||| ||||||||||||   ||||||||||||||||    
T  5331237 tga-tattaaaaaagaatttaatctaattaaactattagttcgttagtccatttaaacttaggtcacattgcttatttaaa 5331316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 134 - 283
Target Start/End: Original strand, 24073476 - 24073623
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    |||||||||||| |||||||||||  |||||||| | ||| | || |||||||||||| |||||||||| |||||||||||||||||| ||||||||| |    
T  24073476 cagtaatttaagtttattagtata--ttaattttgtacatatttagatgtattattataaactagaattaaaatatgatacaatatatagtcaaattccc 24073573  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaactggtatatt 283  Q
    ||||  || || | ||||||||||| ||| |||||||||| || ||||||    
T  24073574 taaatacttatcttgattatcaaaagagaatttaatctaattgatatatt 24073623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 138 - 239
Target Start/End: Complemental strand, 5167382 - 5167280
Alignment:
Q  138 aatttaagctt-attagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaa 236  Q
    ||||||||||| |||||||||||||||||| ||| || ||||||||||||||||| |  |||||| ||||||||||||||||||| ||| ||||  ||||    
T  5167382 aatttaagctttattagtatacattaatttgttgtatatataaatgtattattataagttagaatagaaatatgatacaatatatagtctaatttcctaa 5167283  T
Q  237 aac 239  Q
    |||    
T  5167282 aac 5167280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 10265696 - 10265800
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    ||||| |||||  ||||| ||||||||||||||||  ||| | ||||||||||||||| || |||| |||||| |||||| ||||| | |||||||| ||    
T  10265696 cagtagtttaaatttattggtatacattaatttttcacatatttaaatgtattattataaattagagttgaaacatgatataatatttagtcaaattttc 10265795  T
Q  234 taaaa 238  Q
    |||||    
T  10265796 taaaa 10265800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 6248609 - 6248656
Alignment:
Q  19 cactgaccatcaaaaagtctcttaaaccggcatatttaagtaaacatg 66  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  6248609 cactgaccatcaaaaagcctcttaagccggcatatttaagtaaacatg 6248656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 333
Target Start/End: Complemental strand, 33614730 - 33614532
Alignment:
Q  137 taatttaagcttattagtatacattaattttttg--catttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctct 234  Q
    |||||||| || ||| |||||||||| ||||||   ||| | ||||| ||||||||| ||||| ||||||||||||||  |||| || ||||  || |||    
T  33614730 taatttaaactgatttgtatacattatttttttttacatatttaaatatattattataaactaaaattgaaatatgatttaataaatagtcatgttttct 33614631  T
Q  235 aaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||||  ||||||  | |||||||| |||||| ||||| | || ||||||| |||||   |||||||||||||| |  |||||   ||||||||||||||    
T  33614630 aaaaattcatgttaaatatcaaaagagagttcaatctcattgatatattagttcgttgatctatttaaacttatattacattatatatttaaatatgtt 33614532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 134 - 239
Target Start/End: Original strand, 33599339 - 33599446
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaac--tagaattgaaatatgatacaatatattgtcaaattc 231  Q
    |||||||| | | ||||||||||||| |||||||| |||| | |||| |||||||||| |||   ||||||||||||||||| ||||||| || || |||    
T  33599339 cagtaattcaggattattagtatacaataatttttcgcatatttaaaagtattattataaacataagaattgaaatatgatataatatatagtaaagttc 33599438  T
Q  232 tctaaaac 239  Q
     |||||||    
T  33599439 actaaaac 33599446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 238
Target Start/End: Complemental strand, 2804033 - 2803933
Alignment:
Q  138 aatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaa 237  Q
    ||||||||||||||| |||| |  ||||||| |||| | | ||| ||||||||| ||||| ||| ||||| | ||| ||||||  |||||||||||||||    
T  2804033 aatttaagcttattattatataccaatttttcgcatatttgaatatattattataaactaaaatagaaatcttatataatataaagtcaaattctctaaa 2803934  T
Q  238 a 238  Q
    |    
T  2803933 a 2803933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 333
Target Start/End: Original strand, 6228374 - 6228412
Alignment:
Q  295 ctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  6228374 ctatttaaacttagatcacattgcttatttaaatatgtt 6228412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 119; Significance: 9e-61; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 135 - 333
Target Start/End: Complemental strand, 36440115 - 36439917
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctct 234  Q
    ||||||||||| ||||||||||||||||  ||||||||| | ||||||||||||||| || ||||||||||||||||||||||||||  |||||||||||    
T  36440115 agtaatttaagtttattagtatacattatatttttgcatatttaaatgtattattataaagtagaattgaaatatgatacaatatataatcaaattctct 36440016  T
Q  235 aaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||||  |||||| ||||||||||| |||||||||||||  || ||||||| ||||| |||||||||||||||||| ||||||||||||||||| |||||    
T  36440015 aaaaagtcatgttgattatcaaaagagagtttaatctatttgatatattagttcgttagtctatttaaacttagataacattgcttatttaaagatgtt 36439917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 134 - 327
Target Start/End: Original strand, 19297984 - 19298177
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||  ||||||||| ||||||||  |    
T  19297984 cagtaatttaagcttattagtatacattaactttttgcatatataaatgtattattataaactagaattgaaatatggaacaatatatagtcaaatttcc 19298083  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaa 327  Q
    ||||| ||||||| ||||||||||| |||||||||||||  || ||||||| || |  ||||||||||||||||||  ||||||||||||||||    
T  19298084 taaaaactcatgttgattatcaaaagagagtttaatctagttgatatattagttaggtagtctatttaaacttagatcacattgcttatttaaa 19298177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 134 - 333
Target Start/End: Original strand, 6391366 - 6391564
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    ||||||||||||||||||| ||| ||||||||||||| || | ||||||||||| ||| ||||||||||||||||||||||||||||| ||| ||||| |    
T  6391366 cagtaatttaagcttattaatatgcattaattttttgtatatttaaatgtattactataaactagaattgaaatatgatacaatatatagtc-aattccc 6391464  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||||| |||| || |||||||||||||||||||||||||| || ||||||| ||||  ||||||||||||||||||  |||||||||||||||| |||||    
T  6391465 taaaaactcaagttgattatcaaaatagagtttaatctaattgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgtt 6391564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 134 - 333
Target Start/End: Complemental strand, 42108719 - 42108520
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    ||||||||||||||||||| | |||||||||||||||||| | || |||||||||||| ||||||||||||||| ||||||||||||| ||||||||| |    
T  42108719 cagtaatttaagcttattaatctacattaattttttgcatatttatatgtattattataaactagaattgaaatctgatacaatatatagtcaaattccc 42108620  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    |||||  |||||| ||||||||||| |||||||||||||| || ||||||| ||||  ||||||||||||||| ||  | |||||||||||||| |||||    
T  42108619 taaaaattcatgttgattatcaaaagagagtttaatctaattgatatattagttcgctagtctatttaaacttggatcatattgcttatttaaagatgtt 42108520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 139 - 333
Target Start/End: Complemental strand, 16885647 - 16885452
Alignment:
Q  139 atttaagctt-attagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaa 237  Q
    |||||||||| |||| | |||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||    
T  16885647 atttaagctttattaatttacattaattttttgcatatataaatgtattattataaactagaatagaaatatgatacaatatatagtcaaattctctaaa 16885548  T
Q  238 acctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||||  ||| ||||||||||| |||||||||||||| ||   ||||| ||||   ||| |||||||||||||  |||||||||||||||| |||||    
T  16885547 accttgtgttgattatcaaaagagagtttaatctaattgaactattagttcgctggtccatttaaacttagattacattgcttatttaaagatgtt 16885452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 136 - 333
Target Start/End: Original strand, 40201751 - 40201950
Alignment:
Q  136 gtaatttaagcttattagtatacatta--attttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    |||||||||||||||||||||||||||  |||||||| || | ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |    
T  40201751 gtaatttaagcttattagtatacattattattttttgaatatttaaatgtattattataaactagaattgaaatatgatacaatatatagtcaaattccc 40201850  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||||  || || | ||||||||||| |||||| ||||||| || ||||||| || |  ||||||||||||||||||  |||||||||||| ||| |||||    
T  40201851 taaagacttatcttgattatcaaaagagagttcaatctaattgatatattagtttgctagtctatttaaacttagatcacattgcttattaaaagatgtt 40201950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 135 - 333
Target Start/End: Complemental strand, 38876825 - 38876626
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctct 234  Q
    |||||||| | ||||||| ||||||||||||||||| || | ||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||    
T  38876825 agtaatttcaacttattaatatacattaattttttgtatatttaaatgtattattataaactagaattgaaatatgatacaatatatagtcaaattttct 38876726  T
Q  235 aaaacctcatgtcgattatcaaaatagagtttaatctaactggt-atattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    |||| ||||||| ||||||||||| |||||||||||||| || | |||||| || |   |||||||||||||||||   ||||| ||||||||| |||||    
T  38876725 aaaaactcatgttgattatcaaaaaagagtttaatctaattgataatattagtttgctggtctatttaaacttagatctcattgtttatttaaagatgtt 38876626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 138 - 333
Target Start/End: Complemental strand, 40514965 - 40514768
Alignment:
Q  138 aatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaa 237  Q
    ||||||||||| ||||| |||||||||||||||||| | ||||||||||||||| |||||||||||||||||| |||||||||| ||||| ||| |||||    
T  40514965 aatttaagcttgttagtgtacattaattttttgcatatttaaatgtattattataaactagaattgaaatatggtacaatatatagtcaacttccctaaa 40514866  T
Q  238 acctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagaca--acattgcttatttaaatatgtt 333  Q
    | || |||| |||||||| || |||||||||||||| || ||||||| ||||  ||| |||||||||||| | |  |||||| ||||||||| |||||    
T  40514865 aactgatgttgattatcataagagagtttaatctaattgatatattacttcgctagtatatttaaacttaaatatcacattgtttatttaaagatgtt 40514768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 137 - 269
Target Start/End: Complemental strand, 32907018 - 32906886
Alignment:
Q  137 taatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaa 236  Q
    ||||||||| |||||||||||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||||||||| |||||||||  |||    
T  32907018 taatttaagtttattagtatacattaatttttcgcatataaaaatgtattattataaactagaattgaaatatgatacaatatatagtcaaattccgtaa 32906919  T
Q  237 aacctcatgtcgattatcaaaatagagtttaat 269  Q
    || ||||||||||||||||||| | ||||||||    
T  32906918 aaactcatgtcgattatcaaaagatagtttaat 32906886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 135 - 333
Target Start/End: Original strand, 11422538 - 11422738
Alignment:
Q  135 agtaatttaagcttattagtatacattaatttttt--gcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattct 232  Q
    ||||||||||| |||||||||| ||||| ||||||  |||| | |||| |||||||||| ||| |||||||||||||||||||||||||  |||||||      
T  11422538 agtaatttaagtttattagtatgcattagttttttttgcatatttaaacgtattattataaacaagaattgaaatatgatacaatatatattcaaatttc 11422637  T
Q  233 ctaaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgt 332  Q
    |||||| ||||||| ||||||||||| | |||||||||||| || ||||| ||||||  | ||||||||||||||||  ||| |||||||||||| ||||    
T  11422638 ctaaaaactcatgttgattatcaaaagatagtttaatctaattgatatataaattcgctaatctatttaaacttagatcacaatgcttatttaaaaatgt 11422737  T
Q  333 t 333  Q
    |    
T  11422738 t 11422738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 147 - 333
Target Start/End: Complemental strand, 14830783 - 14830597
Alignment:
Q  147 ttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgt 246  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||| ||| ||||| |||||||||| | |    
T  14830783 ttattagtatacattaattttttgcatatataaatgtattattataaactagaatagaaatatgatacaatatatagtcgaattccctaaaacctcgtat 14830684  T
Q  247 cgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
     |||||| |||| ||||||||||| || ||   ||||| || |  |||| |||||||||||||  | |||||||| ||||| |||||    
T  14830683 tgattattaaaagagagtttaatccaattgaactattagtttgctagtccatttaaacttagatcatattgcttacttaaagatgtt 14830597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 137 - 333
Target Start/End: Original strand, 28207234 - 28207436
Alignment:
Q  137 taatttaagctt-attagtatacattaatttttt-----gcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaatt 230  Q
    |||||||||||| ||||||||||| |||||||||     | || ||||||||||||||||| ||||||||| |||||||||||||||||||| || ||||    
T  28207234 taatttaagctttattagtatacaataatttttttttttgtatatataaatgtattattataaactagaatagaaatatgatacaatatattttcgaatt 28207333  T
Q  231 ctctaaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatat 330  Q
    | |||||||||| ||| ||||||||||| |||||||||| ||| ||   ||||| ||||  |||| |||||||||||||  |||||||||||||||| ||    
T  28207334 ccctaaaacctcgtgttgattatcaaaagagagtttaatttaattgaactattagttcgctagtccatttaaacttagatcacattgcttatttaaaaat 28207433  T
Q  331 gtt 333  Q
    |||    
T  28207434 gtt 28207436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 159 - 333
Target Start/End: Complemental strand, 15530263 - 15530089
Alignment:
Q  159 attaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaa 258  Q
    |||||||| |||||| || |||||||||||||| ||||||||| ||||||||||||||||||| ||| ||||| ||||||| || ||| |||||||||||    
T  15530263 attaatttgttgcatataaaaatgtattattataaactagaatagaaatatgatacaatatatagtcgaattccctaaaacatcgtgttgattatcaaaa 15530164  T
Q  259 tagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
     |||||||||||||| ||   ||||| |||| ||||| ||||||| |||||  |||||| ||||||||| |||||    
T  15530163 gagagtttaatctaattgaactattagttcgccagtccatttaaatttagatcacattgtttatttaaagatgtt 15530089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 164 - 329
Target Start/End: Original strand, 8570178 - 8570345
Alignment:
Q  164 ttttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattat--caaaatag 261  Q
    |||||||||| | ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||| |||||| ||||||| ||||||   |||| |     
T  8570178 ttttttgcatatttaaatgtattattataaacttgaattgaaatatgatacaatatatagtcaaattccctaaaaactcatgttgattatgaaaaaaaaa 8570277  T
Q  262 agtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaata 329  Q
    |||||||||||| || ||||||| || || |||||||||||| |||||  ||||| ||||||||||||    
T  8570278 agtttaatctaattgatatattagtttgttagtctatttaaatttagatcacattacttatttaaata 8570345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 164 - 333
Target Start/End: Complemental strand, 35319469 - 35319300
Alignment:
Q  164 ttttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaatagag 263  Q
    |||||||||| | || |||||||||||| || |||||||||||| |||||||||| || | ||||| | || |||  |||||| ||||||||||| |||     
T  35319469 ttttttgcatatttatatgtattattataaagtagaattgaaatctgatacaataaatagccaaataccctgaaaattcatgttgattatcaaaagagac 35319370  T
Q  264 tttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    |||||||||| || ||||||| |||   ||||||||||||||||||  ||||||||||||||||||||||    
T  35319369 tttaatctaattgatatattagttccctagtctatttaaacttagatcacattgcttatttaaatatgtt 35319300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 178 - 333
Target Start/End: Original strand, 12580077 - 12580232
Alignment:
Q  178 aaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaatagagtttaatctaactgg 277  Q
    |||||||||||||| |||||||||  |||||||||||||||||| ||| || || ||||||| || ||| ||||||||||| |||||||||||||| ||     
T  12580077 aaatgtattattataaactagaataaaaatatgatacaatatatagtcgaactccctaaaacttcgtgttgattatcaaaagagagtttaatctaattga 12580176  T
Q  278 tatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
      ||||| ||||  |||| |||||||||||||  |||||||||||||||| |||||    
T  12580177 actattagttcgctagtccatttaaacttagatcacattgcttatttaaagatgtt 12580232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 164 - 333
Target Start/End: Original strand, 41386881 - 41387050
Alignment:
Q  164 ttttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaatagag 263  Q
    ||||||| || | ||||| ||||||||| ||||||| |||||||||||||||||| || |||||||||  ||||| ||||| | ||||||||||| ||||    
T  41386881 ttttttgtatatttaaatatattattataaactagacttgaaatatgatacaatacatagtcaaattcattaaaaactcatattgattatcaaaagagag 41386980  T
Q  264 tttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||| |||||| || ||||||| ||||  |||||||||||||||| |  || |||||||| |||| |||||    
T  41386981 tttgatctaattgatatattagttcgctagtctatttaaacttatatcactttgcttatataaagatgtt 41387050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 186 - 333
Target Start/End: Original strand, 16844483 - 16844630
Alignment:
Q  186 tattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaa 285  Q
    |||||| | ||||||| ||||||||||||||||||| ||| || || |||||| ||||||| |||||||||||||||||||||||||| ||   |||||     
T  16844483 tattataacctagaatagaaatatgatacaatatatagtcgaactccctaaaatctcatgttgattatcaaaatagagtttaatctaattgaactattag 16844582  T
Q  286 ttcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||||  |||| |||||||||||||  ||||| |||||||||| |||||    
T  16844583 ttcgctagtccatttaaacttagatcacatttcttatttaaagatgtt 16844630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 134 - 333
Target Start/End: Original strand, 40417260 - 40417464
Alignment:
Q  134 cagtaatttaagcttattagtatacatta----attttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaat 229  Q
    |||||||||||||||||||| ||||||||    ||||||||||| | | || |||||||||| |||||||||| |||||||||||||||| | || ||||    
T  40417260 cagtaatttaagcttattagcatacattattttattttttgcatattttaaagtattattataaactagaattaaaatatgatacaatatttagttaaat 40417359  T
Q  230 tctctaaaacctcatgtcgattatcaaaatagag-tttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaat 328  Q
    | | ||||| ||||||| ||||||  |||  ||| ||| |||||| || ||||||| |||   ||||||||||||||| ||  ||||||||||||||||     
T  40417360 tatttaaaaactcatgttgattatataaagcgagtttttatctaattgatatattagttcactagtctatttaaacttcgatcacattgcttatttaaag 40417459  T
Q  329 atgtt 333  Q
    |||||    
T  40417460 atgtt 40417464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 135 - 269
Target Start/End: Original strand, 22859579 - 22859713
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctct 234  Q
    |||||||||||||||||||| ||||||| |||||||||| | ||||  ||||||||| || |||||||||||||||||| ||||||| || || ||||||    
T  22859579 agtaatttaagcttattagtttacattatttttttgcatatttaaaactattattataaattagaattgaaatatgatataatatatagtaaagttctct 22859678  T
Q  235 aaaacctcatgtcgattatcaaaatagagtttaat 269  Q
    ||||| |||| |  | |||||||| ||||||||||    
T  22859679 aaaacttcatattaaatatcaaaagagagtttaat 22859713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 327
Target Start/End: Complemental strand, 333850 - 333701
Alignment:
Q  178 aaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaatagagtttaatctaactgg 277  Q
    ||||||||||| || |||||||||  ||||| | | |||||||| |||||| || |||||||||| ||| ||||||||||| |||||||||||||| ||     
T  333850 aaatgtattatcataaactagaatataaataaggtgcaatatatagtcaaactccctaaaacctcgtgttgattatcaaaagagagtttaatctaattga 333751  T
Q  278 tatattaattcgtcagtctatttaaacttagacaacattgcttatttaaa 327  Q
      ||||| ||||  |||| ||||||| |||||  ||||||||||||||||    
T  333750 actattagttcgctagtccatttaaatttagatcacattgcttatttaaa 333701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 137 - 269
Target Start/End: Complemental strand, 10623733 - 10623605
Alignment:
Q  137 taatttaagctt-attagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctcta 235  Q
    |||||||||||| |||||||||| |||||||||||||| ||||||| |||||     || |||||| ||||||||||||||||||| ||| ||||  |||    
T  10623733 taatttaagctttattagtataccttaattttttgcatatataaatatatta-----aattagaatagaaatatgatacaatatatagtcgaatttccta 10623639  T
Q  236 aaacctcatgtcgattatcaaaatagagtttaat 269  Q
    ||| ||| ||| ||||||||||| ||||||||||    
T  10623638 aaatctcgtgttgattatcaaaagagagtttaat 10623605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 271
Target Start/End: Complemental strand, 29571288 - 29571151
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttat--aaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattc 231  Q
    |||||||||||| ||| || ||||||||||||||||  || |||  |||||||||||||| ||||| ||||||||||||||||||||||| || ||||||    
T  29571288 cagtaatttaagtttagtattatacattaattttttt-atctatttaaatgtattattataaactacaattgaaatatgatacaatatatagttaaattc 29571190  T
Q  232 tctaaaacctcatgtcgattatcaaaatagagtttaatct 271  Q
     |||||| |||||    |||||||||| ||||||||||||    
T  29571189 cctaaaa-ctcatcctaattatcaaaagagagtttaatct 29571151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 333
Target Start/End: Complemental strand, 39981773 - 39981621
Alignment:
Q  182 gtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaatagag-tttaatctaactggtat 280  Q
    |||||||||| |||||||||| |||||||||||||||| | || ||||| | ||||| ||||||| ||||||  |||  ||| ||| |||||| || |||    
T  39981773 gtattattataaactagaattaaaatatgatacaatatttagttaaattatttaaaaactcatgttgattatataaagcgagtttttatctaattgatat 39981674  T
Q  281 attaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    |||| |||   ||||||||||||||| ||  ||||||||||||||||||||||    
T  39981673 attagttcactagtctatttaaacttcgatcacattgcttatttaaatatgtt 39981621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 137 - 333
Target Start/End: Complemental strand, 28022942 - 28022742
Alignment:
Q  137 taatttaagcttattagtataca----ttaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattct 232  Q
    |||||||||||||||| |||| |    |||| ||||||||| | ||| ||||||||||| || || || |||||||||||||||| |||  | ||||| |    
T  28022942 taatttaagcttattaatataaagttgttaactttttgcatatttaagtgtattattataaattaaaactgaaatatgatacaatttataataaaatttt 28022843  T
Q  233 ctaaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgt 332  Q
    |||||| |||||||  ||||| |||| |||||||||||||  || |  |||| ||||  | ||||||| ||||||||  |||||||||||||||| ||||    
T  28022842 ctaaaaactcatgtttattataaaaagagagtttaatctagttgatcaattagttcgctaatctattttaacttagatcacattgcttatttaaagatgt 28022743  T
Q  333 t 333  Q
    |    
T  28022742 t 28022742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 817758 - 817855
Alignment:
Q  141 ttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaa 238  Q
    |||||||||||||||||| ||||| |||||||| |  ||||||||||| || | | |||||| |||||||||| ||||||| ||||||||||||||||    
T  817758 ttaagcttattagtatacgttaatattttgcatattaaaatgtattatcataagcgagaattaaaatatgatataatatatggtcaaattctctaaaa 817855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 18731042 - 18731138
Alignment:
Q  143 aagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaac 239  Q
    ||||||||||||||||||| ||||||  ||| | ||||||||||||||| ||  ||||||||||||||||| | ||||| || ||||||||||||||    
T  18731042 aagcttattagtatacattgatttttcacatatttaaatgtattattataaataagaattgaaatatgatatattatatagtaaaattctctaaaac 18731138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 41237309 - 41237237
Alignment:
Q  148 tattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatata 220  Q
    ||||||||| ||||||||||| || | | ||||||||||||||||||||||||||||||||||||| ||||||    
T  41237309 tattagtatgcattaatttttcgcgtatttaaatgtattattatgaactagaattgaaatatgatataatata 41237237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 238
Target Start/End: Complemental strand, 8689285 - 8689202
Alignment:
Q  154 tatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaa 238  Q
    |||| ||||||||||||||  | ||||||||||||||| || |||||||||||| ||||||| ||||| ||||||||||||||||    
T  8689285 tatatattaattttttgcaaat-taaatgtattattataaattagaattgaaatttgatacattatatagtcaaattctctaaaa 8689202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 135 - 322
Target Start/End: Original strand, 17742813 - 17743008
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgataca--atatattgtcaaattc- 231  Q
    ||||||||||| | |||||| ||| ||||||||||| || | |||||||||||| || ||||| |||||||||||||||||  |||||| |||||||||     
T  17742813 agtaatttaagttcattagtttactttaattttttgaatatttaaatgtattataat-aactaaaattgaaatatgatacaatatatatagtcaaattcc 17742911  T
Q  232 ------tctaaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttat 322  Q
            ||||| ||||| | |||||| |||| |||||||||||||| || ||||||| || |  |||||||| ||||||| |  |||||||||||    
T  17742912 ataaaaattaaaaactcatcttgattattaaaagagagtttaatctaattgatatattagtttgctagtctattgaaacttaaatcacattgcttat 17743008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 164 - 267
Target Start/End: Original strand, 21961557 - 21961660
Alignment:
Q  164 ttttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaatagag 263  Q
    |||||| ||| | ||||| ||||||||||||||| |||||||||||||||  |||||||||||| ||||||||||  ||||||  | |||| |||| |||    
T  21961557 ttttttacatatttaaatttattattatgaactaaaattgaaatatgatattatatattgtcaacttctctaaaatgtcatgttaaatatctaaatggag 21961656  T
Q  264 ttta 267  Q
    ||||    
T  21961657 ttta 21961660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 147 - 189
Target Start/End: Complemental strand, 333903 - 333861
Alignment:
Q  147 ttattagtatacattaattttttgcatttataaatgtattatt 189  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  333903 ttattagtatacattaattttttgcatatataaatgtattatt 333861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 25606382 - 25606303
Alignment:
Q  159 attaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaa 238  Q
    |||||||||||| || | |||| || ||||||| ||||||||||||| | ||||| ||||||| |||||||| |||||||    
T  25606382 attaattttttgtatatttaaaagtgttattataaactagaattgaattgtgatataatatatagtcaaattatctaaaa 25606303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 12580011 - 12580065
Alignment:
Q  137 taatttaagctt-attagtatacattaa-ttttttgcatttataaatgtattatt 189  Q
    |||||||||||| ||||||||||||||| |||||||||| |||||||||||||||    
T  12580011 taatttaagctttattagtatacattaatttttttgcatatataaatgtattatt 12580065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 238
Target Start/End: Complemental strand, 15577970 - 15577928
Alignment:
Q  196 tagaattgaaatatgatacaatatattgtcaaattctctaaaa 238  Q
    |||||||||||||||||| ||||||| ||||||||||||||||    
T  15577970 tagaattgaaatatgatataatatatagtcaaattctctaaaa 15577928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 189
Target Start/End: Original strand, 16844422 - 16844464
Alignment:
Q  147 ttattagtatacattaattttttgcatttataaatgtattatt 189  Q
    ||||||||||| ||||||||||||||| |||||||||||||||    
T  16844422 ttattagtatatattaattttttgcatatataaatgtattatt 16844464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 223
Target Start/End: Complemental strand, 39964112 - 39964026
Alignment:
Q  138 aatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaa-ctagaattgaaatatgatacaatatattg 223  Q
    |||| |||||||| |||||||||||| |||| |||| | ||||| | ||||||| || ||| |||||||||||||||||||| ||||    
T  39964112 aattcaagcttataagtatacattaaattttcgcatatttaaatatgttattataaaactacaattgaaatatgatacaatacattg 39964026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 41873128 - 41873182
Alignment:
Q  137 taatttaagctt-attagtatacattaa-ttttttgcatttataaatgtattatt 189  Q
    |||||||||||| ||||||||||||||| |||||||||| |||||||||||||||    
T  41873128 taatttaagctttattagtatacattaatttttttgcatatataaatgtattatt 41873182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 205
Target Start/End: Complemental strand, 9190470 - 9190402
Alignment:
Q  136 gtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaa 205  Q
    ||||||||||||||||| | |||||||||||||| ||| | |||||| |||| ||| |||||||||||||    
T  9190470 gtaatttaagcttattaatttacattaattttttacatctttaaatgcatta-tataaactagaattgaa 9190402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 11873655 - 11873606
Alignment:
Q  137 taatttaagcttattagtatacattaattttttgcatttataaatgtatt 186  Q
    |||||||| |||||||||||||||||||||| ||||| | ||||||||||    
T  11873655 taatttaaacttattagtatacattaattttctgcatatttaaatgtatt 11873606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 29090026 - 29090091
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaa 200  Q
    ||||||||||| |||||| |||||||||||||||  | | | ||||||||||||||| ||||||||    
T  29090026 agtaatttaagtttattaatatacattaatttttcacgtatttaaatgtattattataaactagaa 29090091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 3010417 - 3010322
Alignment:
Q  141 ttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaa 237  Q
    ||||||||| || ||||| ||| | |||||||| | |||||| |||||||| | ||| ||||||||||||||| ||||||| | |||||| ||||||    
T  3010417 ttaagcttaataatatacgtta-tgttttgcatatttaaatgaattattataatctataattgaaatatgatataatatatggccaaattttctaaa 3010322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 11789740 - 11789830
Alignment:
Q  140 tttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaatt 230  Q
    ||||| |||||||||||||||||||||||||  |   ||||| ||||||||| || |  |||| |||||||||| |||||||  |||||||    
T  11789740 tttaaacttattagtatacattaattttttgtttacttaaatatattattataaattgaaattaaaatatgatataatatataatcaaatt 11789830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 169
Target Start/End: Complemental strand, 15578020 - 15577986
Alignment:
Q  135 agtaatttaagcttattagtatacattaatttttt 169  Q
    |||||||||||||||||| ||||||||||||||||    
T  15578020 agtaatttaagcttattaatatacattaatttttt 15577986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 169
Target Start/End: Complemental strand, 22658565 - 22658531
Alignment:
Q  135 agtaatttaagcttattagtatacattaatttttt 169  Q
    |||||||||||||||||| ||||||||||||||||    
T  22658565 agtaatttaagcttattaatatacattaatttttt 22658531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 333
Target Start/End: Complemental strand, 39964021 - 39963938
Alignment:
Q  248 gattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    |||||||||||  ||||||||||||  || | ||||| ||||| ||||||||||||||||||  | ||| |||||||||| |||||    
T  39964021 gattatcaaaa--gagtttaatctagttgatttattagttcgttagtctatttaaacttagattatattacttatttaaagatgtt 39963938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 18988689 - 18988628
Alignment:
Q  177 taaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaa 238  Q
    ||||| |||||||||  | |||||||||||||||||| |||||||  |||| ||||||||||    
T  18988689 taaatatattattatagattagaattgaaatatgatataatatataatcaagttctctaaaa 18988628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 41873203 - 41873259
Alignment:
Q  186 tattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctc 242  Q
    |||||| ||||||||| ||||||||||| ||||||| ||  || |||||||||||||    
T  41873203 tattataaactagaatagaaatatgatataatatatggttgaactctctaaaacctc 41873259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 3e-57; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 135 - 327
Target Start/End: Original strand, 4576593 - 4576785
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctct 234  Q
    ||||||||||||||||||||||| ||||||||||||||| | ||||| ||||||||| ||||||||||||||||||||| ||||||| ||||||||  ||    
T  4576593 agtaatttaagcttattagtatatattaattttttgcatatttaaatttattattataaactagaattgaaatatgatataatatatagtcaaatttcct 4576692  T
Q  235 aaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaa 327  Q
    |||| ||||||| |||||||||||  ||||| ||||||| || ||||||| ||||| ||||||||||||||||||  ||||||||||||||||    
T  4576693 aaaaactcatgttgattatcaaaagggagttgaatctaattgatatattagttcgttagtctatttaaacttagatcacattgcttatttaaa 4576785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 134 - 327
Target Start/End: Original strand, 11432361 - 11432554
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    |||||||||||||||| || |||||||||||||||||||| | ||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||    
T  11432361 cagtaatttaagcttactaatatacattaattttttgcatatttaaatgtattattgtaaactagaattgaaatatgatacaatatatagtcaaattctc 11432460  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaa 327  Q
    |||||  |||||| ||||||||||| |||||||||| ||| || ||||||| ||||  | ||||||||||||||||  ||||| || |||||||    
T  11432461 taaaaattcatgttgattatcaaaagagagtttaatttaattgatatattagttcgctaatctatttaaacttagatcacattactgatttaaa 11432554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 134 - 333
Target Start/End: Complemental strand, 32519930 - 32519730
Alignment:
Q  134 cagtaatttaagcttattagtatacattaatttttt-gcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattct 232  Q
    ||||||||||||||||||||||||||||| |||||| |||  | ||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||     
T  32519930 cagtaatttaagcttattagtatacattattttttttgcacatttaaatgtattattataaactataattgaaatatgatacaatatatagtcaaattcc 32519831  T
Q  233 ctaaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgt 332  Q
     ||||| ||| ||| ||||||||||| |||||||||||||| || | ||||||||||  || ||||||||||||  || |||||||||||||||| ||||    
T  32519830 ttaaaaactcgtgttgattatcaaaagagagtttaatctaattgatctattaattcgctagactatttaaacttcaaccacattgcttatttaaagatgt 32519731  T
Q  333 t 333  Q
    |    
T  32519730 t 32519730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 137 - 333
Target Start/End: Original strand, 6892933 - 6893129
Alignment:
Q  137 taatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatat-tgtcaaattctcta 235  Q
    |||||||||||||||||||||||||||| |||||||| | ||||||||||||||| |||||||||||||||||||||||||||||  || |||||  |||    
T  6892933 taatttaagcttattagtatacattaatgttttgcatatttaaatgtattattataaactagaattgaaatatgatacaatatataggtgaaatttccta 6893032  T
Q  236 aaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||| ||||| | ||||||||||| |||||||||||||| || |||| || ||||  |||||||||||||| |||  |||||||||||||||| |||||    
T  6893033 aaaactcatattgattatcaaaagagagtttaatctaattgatata-tagttcgctagtctatttaaactcagatcacattgcttatttaaaaatgtt 6893129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 177 - 333
Target Start/End: Complemental strand, 34510542 - 34510386
Alignment:
Q  177 taaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaatagagtttaatctaactg 276  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||  |||||| ||||||| ||||||||||| |||||||||||||| ||    
T  34510542 taaatgtattattataaactaaaattgaaatatgatacaatatatagtcaaatttcctaaaaactcatgttgattatcaaaagagagtttaatctaattg 34510443  T
Q  277 gtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
     ||||||| ||||  ||||||||||||||||||  |||||||||||||||| |||||    
T  34510442 atatattagttcgctagtctatttaaacttagattacattgcttatttaaagatgtt 34510386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 134 - 307
Target Start/End: Complemental strand, 22320177 - 22320004
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    ||||||||||||| ||||||| |||||||||||||||||| | || || ||||| ||| ||||||||||||||| ||||||||||||| |||||||| ||    
T  22320177 cagtaatttaagcatattagtctacattaattttttgcatatttatatatattactataaactagaattgaaatctgatacaatatatagtcaaattttc 22320078  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaactta 307  Q
    |||||  |||||| ||||||||||| ||||||||||| || || ||||||| || |  ||||||||||||||||    
T  22320077 taaaaattcatgttgattatcaaaaaagagtttaatcaaattgatatattagtttgctagtctatttaaactta 22320004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 137 - 333
Target Start/End: Original strand, 4435150 - 4435346
Alignment:
Q  137 taatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaa 236  Q
    |||||||| ||||||||||||||||||||||| |||| || |||| ||||| ||| || |||||||||||||||||||||||||| ||| |||||  |||    
T  4435150 taatttaaacttattagtatacattaatttttcgcatatacaaatatattactataaattagaattgaaatatgatacaatatatagtccaattccgtaa 4435249  T
Q  237 aacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    || ||||||| ||||||||||| | |||||||||||| || | ||||| || |  |||||||||||||||| |  |||||| ||||||||| |||||    
T  4435250 aaactcatgttgattatcaaaagatagtttaatctaattgatctattagtttgctagtctatttaaacttatatcacattgtttatttaaagatgtt 4435346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 134 - 309
Target Start/End: Original strand, 41819178 - 41819365
Alignment:
Q  134 cagtaatttaagcttattagtatacattaatttttt------------gcatttataaatgtattattatgaactagaattgaaatatgatacaatatat 221  Q
    ||||||||||||||||||||||||||||||||||||            | || | ||||||||||||||| |||||||||||||||||||||||||||||    
T  41819178 cagtaatttaagcttattagtatacattaattttttttttttttttttgtatatttaaatgtattattataaactagaattgaaatatgatacaatatat 41819277  T
Q  222 tgtcaaattctctaaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttaga 309  Q
     ||||||||| |||||| ||||||| ||||||||||| | |||||||||||| || ||||||| || |  ||||||||||||||||||    
T  41819278 agtcaaattccctaaaaactcatgtagattatcaaaagaaagtttaatctaattgatatattagtttgctagtctatttaaacttaga 41819365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 161 - 333
Target Start/End: Complemental strand, 7913057 - 7912885
Alignment:
Q  161 taattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaata 260  Q
    ||||||||| ||| ||||| ||||||||||| ||||||||||||||| ||||||| ||||| ||| ||||  |||||| ||||||  ||||||||||| |    
T  7913057 taattttttacatatataattgtattattataaactagaattgaaatctgatacagtatatagtcgaatttcctaaaaactcatgctgattatcaaaaga 7912958  T
Q  261 gagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||||||||||||| || ||||||| ||||  | |||||||||||||||| ||||||||||| ||||| |||||    
T  7912957 gagtttaatctaattgatatattagttcgctaatctatttaaacttagataacattgcttaattaaaaatgtt 7912885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 137 - 333
Target Start/End: Original strand, 55957521 - 55957717
Alignment:
Q  137 taatttaagctt-attagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctcta 235  Q
    |||||||||||| |||| |||||||||||| ||||| | ||||||||||| || || ||||| ||| ||||||||||||||||||| ||| |||||||||    
T  55957521 taatttaagctttattaatatacattaattgtttgcctatataaatgtatcat-ataaactaaaatagaaatatgatacaatatatagtcgaattctcta 55957619  T
Q  236 aaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||||||| ||| ||||||||||| |||||||||||||| ||   ||||| ||||  |||| | |||||||||||  |||||| ||||||||| |||||    
T  55957620 aaacctcgtgttgattatcaaaagagagtttaatctaattgaactattatttcgctagtccacttaaacttagatcacattggttatttaaagatgtt 55957717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 138 - 327
Target Start/End: Original strand, 43024608 - 43024797
Alignment:
Q  138 aatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaa 237  Q
    |||||||||||||||||||||| ||||||||||||| | ||||| ||||||||| || ||||||| |||||||||| ||||||| ||||| |||||||||    
T  43024608 aatttaagcttattagtatacactaattttttgcatatttaaatttattattataaagtagaatttaaatatgatataatatatagtcaatttctctaaa 43024707  T
Q  238 acctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaa 327  Q
    |  ||||||  | ||| |||| | |||||||||| | |  | ||||| || |  ||||||||||||||||||  |||||  |||||||||    
T  43024708 agttcatgttaaatattaaaacaaagtttaatctcattaatctattagtttggaagtctatttaaacttagatcacattatttatttaaa 43024797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 211 - 333
Target Start/End: Original strand, 23620919 - 23621040
Alignment:
Q  211 atacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagac 310  Q
    ||||||||||| ||||||||| |||||| ||| ||| ||||||||||| |||||||||||||| || | |||||||| |  ||||||||||||||||||     
T  23620919 atacaatatat-gtcaaattccctaaaaactcttgttgattatcaaaagagagtttaatctaattgatctattaatttgctagtctatttaaacttagat 23621017  T
Q  311 aacattgcttatttaaatatgtt 333  Q
     ||||||||||||||||||||||    
T  23621018 cacattgcttatttaaatatgtt 23621040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 134 - 258
Target Start/End: Complemental strand, 56092365 - 56092241
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    ||||||||||||||||||||||| ||||||||||  |||| | ||||||||||||||| ||||| |||||||||||||||||||||||  ||||||||||    
T  56092365 cagtaatttaagcttattagtatgcattaattttccgcatatttaaatgtattattataaacta-aattgaaatatgatacaatatataatcaaattctc 56092267  T
Q  234 -taaaacctcatgtcgattatcaaaa 258  Q
      ||||  |||||| |||||||||||    
T  56092266 aaaaaaattcatgttgattatcaaaa 56092241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 246
Target Start/End: Original strand, 6828946 - 6829056
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctct 234  Q
    |||||||||||||||||||| ||||||| ||||| |||| | ||||||||||||||| || |||||||||||||||||| ||||||| || || ||||||    
T  6828946 agtaatttaagcttattagtttacatta-tttttcgcatatttaaatgtattattataaattagaattgaaatatgatataatatatagtaaacttctct 6829044  T
Q  235 aaaacctcatgt 246  Q
    ||||| ||||||    
T  6829045 aaaacttcatgt 6829056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 246
Target Start/End: Complemental strand, 26660322 - 26660211
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctct 234  Q
    |||||||||||||||||||| ||||||| |||||||||| | ||||||||||||||| || || ||||||||||||||| ||||||| || || || |||    
T  26660322 agtaatttaagcttattagtttacattatttttttgcatatttaaatgtattattataaattataattgaaatatgatataatatatagtaaatttttct 26660223  T
Q  235 aaaacctcatgt 246  Q
    ||||| ||||||    
T  26660222 aaaacttcatgt 26660211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 333
Target Start/End: Original strand, 37243960 - 37244157
Alignment:
Q  137 taatttaagcttattagtatacattaattttttgcatttata--aatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctct 234  Q
    |||||||||||||||| ||||||||| | |||||||| ||||  || |||||||||| ||||||||||||| || |||||||| |||||| |||| |  |    
T  37243960 taatttaagcttatta-tatacattagtcttttgcatatatataaaggtattattataaactagaattgaagtaagatacaatttattgtgaaatgcctt 37244058  T
Q  235 aaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    |||||||||||| ||||||||||  ||||||||| |||| || | ||||  |||   ||| |||||||||||  |  |||||||||||||||| |||||    
T  37244059 aaaacctcatgttgattatcaaagaagagtttaacctaattgatctatttgttcactagtttatttaaacttgcatcacattgcttatttaaaaatgtt 37244157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 147 - 333
Target Start/End: Complemental strand, 50153893 - 50153707
Alignment:
Q  147 ttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgt 246  Q
    ||||||||||||| |||||||||| || | | ||| ||||||| | ||||| ||||||| ||| | | ||||||| ||||||||||||||||  ||| ||    
T  50153893 ttattagtatacaataattttttgtatattttaatatattattgtaaactataattgaactataacataatatatagtcaaattctctaaaaattcacgt 50153794  T
Q  247 cgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
     ||||||||||| || ||||||||| |    ||||||   || | |||||||||||||||| |  ||||||||||||||||||||||    
T  50153793 tgattatcaaaagagggtttaatctcataaatatatttgatctttagtctatttaaacttatatcacattgcttatttaaatatgtt 50153707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 143 - 269
Target Start/End: Original strand, 30920271 - 30920397
Alignment:
Q  143 aagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctc 242  Q
    |||||||||| ||| |||||||| ||||||| | ||||||||||||||| ||  |||||| |||||||||| |||||||  | || ||||||||||| ||    
T  30920271 aagcttattactatgcattaattgtttgcatatttaaatgtattattataaataagaatttaaatatgatataatatataataaagttctctaaaacatc 30920370  T
Q  243 atgtcgattatcaaaatagagtttaat 269  Q
    || |  | |||||||| ||||||||||    
T  30920371 atattaaatatcaaaagagagtttaat 30920397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 36706458 - 36706381
Alignment:
Q  136 gtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgata 213  Q
    ||||||||| ||||||||| |||||||||||||| ||  | ||||||||||||||| || ||||||||||||||||||    
T  36706458 gtaatttaaacttattagtctacattaatttttttcaaatttaaatgtattattataaagtagaattgaaatatgata 36706381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 309
Target Start/End: Complemental strand, 32526539 - 32526407
Alignment:
Q  177 taaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaatagagtttaatctaactg 276  Q
    ||||||||||||||| ||||||| ||||||||||||| | |||||  |||||||||||||||  ||||||  | ||||||||  ||||||||||| | ||    
T  32526539 taaatgtattattataaactagagttgaaatatgatatagtatataatcaaattctctaaaaattcatgttaaatatcaaaagcgagtttaatcttattg 32526440  T
Q  277 gtatattaattcgtcagtctatttaaacttaga 309  Q
     | ||||| || |  | ||||||||||||||||    
T  32526439 atttattagtttgctaatctatttaaacttaga 32526407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 134 - 221
Target Start/End: Original strand, 33051850 - 33051935
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatat 221  Q
    |||||||||||||||| |||| | | |||||||||||||| | ||||||||||||||| |||||| |||||||||||||| |||||||    
T  33051850 cagtaatttaagcttactagtct-cgttaattttttgcatgtttaaatgtattattataaactag-attgaaatatgatataatatat 33051935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 303
Target Start/End: Complemental strand, 10183866 - 10183690
Alignment:
Q  136 gtaatttaagcttattagtatacattaa-----ttttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatatt--gtcaaa 228  Q
    |||||||||| |||||||||||||||||     ||||||  || | |||||||| | |||| |||||||||||||||||||||||||||||   || |||    
T  10183866 gtaatttaagattattagtatacattaaattttttttttctatatttaaatgtaatgttataaactagaattgaaatatgatacaatatatatagtaaaa 10183767  T
Q  229 ttctctaaaac--ctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaa 303  Q
    ||| ||||||   ||||| | ||||||||||| |||||||| ||||| || ||| ||| ||||  | ||||||||||    
T  10183766 ttccctaaaaaaactcatcttgattatcaaaagagagtttactctaattgatatgttagttcgctaatctatttaaa 10183690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 39721994 - 39722099
Alignment:
Q  164 ttttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaatagag 263  Q
    ||||||| || | ||||||||||||||| ||||||||||||||||||| |  |||||| || ||||| |||||||  |||| |  | |||||||||||||    
T  39721994 ttttttgtatatttaaatgtattattataaactagaattgaaatatgaaatcatatatagttaaattttctaaaatgtcatcttaaatatcaaaatagag 39722093  T
Q  264 tttaat 269  Q
    ||||||    
T  39722094 tttaat 39722099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 139 - 202
Target Start/End: Original strand, 12154200 - 12154265
Alignment:
Q  139 atttaagcttattagtatacattaa--ttttttgcatttataaatgtattattatgaactagaatt 202  Q
    |||||||||||||||||||||||||  |||||||||| | ||||||||||||||| || |||||||    
T  12154200 atttaagcttattagtatacattaattttttttgcatatttaaatgtattattataaattagaatt 12154265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 333
Target Start/End: Complemental strand, 52973880 - 52973696
Alignment:
Q  148 tattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtc 247  Q
    ||||||||||||||| ||||| | || |  |||||||||||    ||||||||||||| ||||||| ||||||| ||| |||||||||||   ||||||     
T  52973880 tattagtatacattattttttcgtatattaaaatgtattatgtaaaactagaattgaa-tatgatataatatatagtccaattctctaaacattcatgtt 52973782  T
Q  248 gattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
     ||||||||||   | |||||||  | || | ||||| ||||  ||||||||| ||||||||  ||||| |||||||||| |||||    
T  52973781 aattatcaaaaggaaatttaatcacattgatctattagttcgctagtctattttaacttagatcacattacttatttaaagatgtt 52973696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 135 - 273
Target Start/End: Original strand, 37665881 - 37666023
Alignment:
Q  135 agtaatttaagcttattagtatacattaa--ttttttgcatttataaatgtattattatgaactagaattgaaatatgataca--atatattgtcaaatt 230  Q
    ||||||||||| ||| ||||| ||| |||  |||||||||| | ||||||||| ||||| |||| |||||||| ||||||| |  |||||| ||||| ||    
T  37665881 agtaatttaagtttactagtaaacaataattttttttgcatatttaaatgtatgattataaactggaattgaagtatgatataatatatatagtcaagtt 37665980  T
Q  231 ctctaaaacctcatgtcgattatcaaaatagagtttaatctaa 273  Q
      |||||| |||||||  | |||||||  ||||||||||||||    
T  37665981 tcctaaaatctcatgttaaatatcaaatgagagtttaatctaa 37666023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 238
Target Start/End: Complemental strand, 29145707 - 29145608
Alignment:
Q  139 atttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaa 238  Q
    ||||||||||||| ||||| ||||||||||   || | ||||| ||||||||| ||||  |||||||||| |||| |||| || |||||||| |||||||    
T  29145707 atttaagcttatttgtatatattaatttttcatatatttaaatatattattataaactgaaattgaaataagatataatagatagtcaaattttctaaaa 29145608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 42894671 - 42894738
Alignment:
Q  140 tttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgata 213  Q
    |||||| |||||| ||||||||||||||| ||||      |||||||||||| |||||||||||||||||||||    
T  42894671 tttaagtttattattatacattaatttttcgcat------atgtattattataaactagaattgaaatatgata 42894738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 38303826 - 38303766
Alignment:
Q  178 aaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaa 238  Q
    |||||||||||||| ||||||||||||||||| |||  |||||  |||||||||| |||||    
T  38303826 aaatgtattattataaactagaattgaaatataatatcatatagagtcaaattctttaaaa 38303766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 27292375 - 27292426
Alignment:
Q  187 attatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaa 238  Q
    ||||| || |||||||| ||||||||| ||||||| ||||||||||||||||    
T  27292375 attataaattagaattgtaatatgatataatatatagtcaaattctctaaaa 27292426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 36105840 - 36105785
Alignment:
Q  251 tatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaactt 306  Q
    |||||||| |||||||||||| | || ||||||| ||||| |||||||||||||||    
T  36105840 tatcaaaagagagtttaatctcattgatatattagttcgttagtctatttaaactt 36105785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 210
Target Start/End: Complemental strand, 25592383 - 25592350
Alignment:
Q  177 taaatgtattattatgaactagaattgaaatatg 210  Q
    ||||||||||||||| ||||||||||||||||||    
T  25592383 taaatgtattattataaactagaattgaaatatg 25592350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 50528733 - 50528836
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    |||||||||||||||| |  ||| |||| | |||| |||| | |||||  |||||||| || || |||| |||||||||| ||||||| |||||| ||||    
T  50528733 cagtaatttaagcttactgctatgcattga-ttttcgcatatttaaataaattattataaagtaaaattaaaatatgatataatatatagtcaaagtctc 50528831  T
Q  234 taaaa 238  Q
    |||||    
T  50528832 taaaa 50528836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 1e-56; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 134 - 333
Target Start/End: Original strand, 2062547 - 2062746
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||| |||||  ||||| ||||||||||||||||||||||| ||||||||||     
T  2062547 cagtaatttaagcttattagtatacattaattttttgcatatttaaatgtactattacaaactataattgaaatatgatacaatatatagtcaaattctt 2062646  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||||| ||||||| |||||| |||| |||||||||||||| || | |||||| |||  ||||||||||||||| ||  |||||||||||||||| |||||    
T  2062647 taaaaactcatgttgattatgaaaagagagtttaatctaattgatctattaaatcgctagtctatttaaacttcgatcacattgcttatttaaagatgtt 2062746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 134 - 333
Target Start/End: Original strand, 38995998 - 38996197
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    ||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||| || ||||||||    
T  38995998 cagtattttaagcttattagtatgcattaattttttgcatatataaatgtattattataaactagaattgaaatatggtacaatatatagtaaaattctc 38996097  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    |||||  |||||| ||||||||||| | |||||||||||| || ||||||| |||   |||||||||||||||| |   ||||||||||||||| |||||    
T  38996098 taaaaattcatgttgattatcaaaagaaagtttaatctaattgatatattagttcactagtctatttaaacttacatcgcattgcttatttaaaaatgtt 38996197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 134 - 333
Target Start/End: Original strand, 44602020 - 44602219
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    ||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||| || ||||||||    
T  44602020 cagtattttaagcttattagtatgcattaattttttgcatatataaatgtattattataaactagaattgaaatatggtacaatatatagtaaaattctc 44602119  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    |||||  |||||| ||||||||||| | |||||||||||| || ||||||| |||   |||||||||||||||| |   ||||||||||||||| |||||    
T  44602120 taaaaattcatgttgattatcaaaagaaagtttaatctaattgatatattagttcactagtctatttaaacttacatcgcattgcttatttaaaaatgtt 44602219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 134 - 303
Target Start/End: Complemental strand, 2510663 - 2510494
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||  |||||||  |    
T  2510663 cagtaatttaagcttattagtatacattaattttttgcatatttaaatgtattattataaactagaattgaaatatgatacaatatataatcaaatttcc 2510564  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaa 303  Q
    ||||| ||||| | ||||||||||| |||||||||||||| || ||||||| ||||  ||||||||||||    
T  2510563 taaaaactcatcttgattatcaaaagagagtttaatctaattgatatattagttcgctagtctatttaaa 2510494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 134 - 333
Target Start/End: Complemental strand, 40691365 - 40691168
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    ||||||||||||||||||||| ||||||||| |||||||| | || |||||||||||| ||||||||||||||| ||||||||||||| |||||| || |    
T  40691365 cagtaatttaagcttattagtctacattaatattttgcatatttatatgtattattataaactagaattgaaatctgatacaatatatagtcaaactccc 40691266  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    |||||  |||||| ||||||||||  |||||||||||||| || ||||||| ||||  ||||||||||||||||||  |||||||||||||||| |||||    
T  40691265 taaaagttcatgttgattatcaaa--agagtttaatctaattgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgtt 40691168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 135 - 333
Target Start/End: Complemental strand, 30469576 - 30469374
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttata----aatgtattattatgaactagaattgaaatatgatacaatatattgtcaaatt 230  Q
    |||||||||||||||||||||||||||| |||||| | || |||    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  30469576 agtaatttaagcttattagtatacattattttttttctttcatatttaaatgtattattataaactagaattgaaatatgatacaatatatagtcaaatt 30469477  T
Q  231 ctctaaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatat 330  Q
      |||||| ||||||| ||||||||||| |||||||||| ||| || ||||||| || |  |||||||| |||||||||  |||||||||||||||| ||    
T  30469476 tcctaaaaactcatgttgattatcaaaagagagtttaatgtaattgatatattagtttgctagtctattcaaacttagatcacattgcttatttaaagat 30469377  T
Q  331 gtt 333  Q
    |||    
T  30469376 gtt 30469374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 137 - 327
Target Start/End: Complemental strand, 10812092 - 10811901
Alignment:
Q  137 taatttaagctt-attagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctcta 235  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||| |||||||||||| ||  ||||| |||    
T  10812092 taatttaagctttattagtatacattaattttttgcatatataaatgtattattataaactagaatagaaataagatacaatatatagttgaattcccta 10811993  T
Q  236 aaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaa 327  Q
    |||| || ||| ||||||||||| |||||||||||||| ||    |||| ||||| |||| |||||||||||||  ||||||||||||||||    
T  10811992 aaacatcgtgtagattatcaaaagagagtttaatctaattgaaccattagttcgttagtccatttaaacttagatcacattgcttatttaaa 10811901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 137 - 333
Target Start/End: Complemental strand, 2374480 - 2374284
Alignment:
Q  137 taatttaagctt-attagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctcta 235  Q
    |||||||||||| ||||||||| || |||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||| ||| ||||| |||    
T  2374480 taatttaagctttattagtatatat-aattttttgcatatataaatgtattattataaactagaatagaaatatgatacaatatatagtcgaattcccta 2374382  T
Q  236 aaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||||||  ||| ||||||||||| |||||||| ||||| ||  |||||| || |  |||| |||||||||||||  ||||||||||||||||||||||    
T  2374381 aaaccttgtgttgattatcaaaagagagtttattctaattgaaatattagtttgctagtccatttaaacttagatcacattgcttatttaaatatgtt 2374284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 135 - 333
Target Start/End: Complemental strand, 9617496 - 9617301
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctct 234  Q
    ||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||| |||||   || ||||||| || ||||||| ||||| ||| ||    
T  9617496 agtaatttaagcttattagtatacattaactttttgcatatttaaatgtattattataaacta---tttaaatatggtataatatatagtcaacttccct 9617400  T
Q  235 aaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    |||| ||||||| ||||||||||| |||||||||| ||| || ||||||| ||||| | ||||||| || |||||  ||||||||||||||||||||||    
T  9617399 aaaaactcatgttgattatcaaaagagagtttaatttaattgatatattagttcgttaatctatttgaatttagattacattgcttatttaaatatgtt 9617301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 134 - 333
Target Start/End: Original strand, 25107300 - 25107494
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    |||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||| ||||||||| |||||||||||||||| || || ||||||||    
T  25107300 cagtaatttaagtttattagtatacattaattttttgcatatttaaatgtattattataaactagaatagaaatatgatacaatacatagttaaattctc 25107399  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    |||||  |||||| ||||||| ||| ||||||| ||     || ||||||| ||||  || |||||||||||||||  |||||||||||||||| |||||    
T  25107400 taaaaattcatgttgattatcgaaagagagtttgat-----tgatatattagttcgctagcctatttaaacttagattacattgcttatttaaagatgtt 25107494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 175 - 333
Target Start/End: Complemental strand, 21019915 - 21019757
Alignment:
Q  175 tataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaatagagtttaatctaac 274  Q
    ||||||||||||||||| |||||||||||||||||||||||| || ||||||||||| |||||| ||||||| ||||||||||| |||||||||| |||     
T  21019915 tataaatgtattattataaactagaattgaaatatgatacaaaattttgtcaaattccctaaaatctcatgttgattatcaaaagagagtttaatttaat 21019816  T
Q  275 tggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    || | ||||| ||||  ||||||||||||||||||  |||||||||||||||| |||||    
T  21019815 tgatctattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgtt 21019757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 134 - 327
Target Start/End: Original strand, 1222238 - 1222431
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    ||||||||||||||||||| || | ||||||||||||||| | |||| |||||||||  | ||| |||||  |||||||||||||||| |||||||||||    
T  1222238 cagtaatttaagcttattactacaaattaattttttgcatatttaaacgtattattacaacctacaattgttatatgatacaatatatagtcaaattctc 1222337  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaa 327  Q
    ||||| ||| ||   ||||||||||||||||||||||||| || ||||||  ||||  ||||||||||||||||||  ||||||||||||||||    
T  1222338 taaaaactcgtgctaattatcaaaatagagtttaatctaattgatatattggttcgctagtctatttaaacttagatcacattgcttatttaaa 1222431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 134 - 333
Target Start/End: Original strand, 10710023 - 10710220
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    ||||||||| | |||||||||||||||||||||||||||  | ||||||||||||||| |||||||||| |||||||||||  ||||| || ||||||||    
T  10710023 cagtaatttgaacttattagtatacattaattttttgcacatttaaatgtattattataaactagaattaaaatatgatac--tatatagttaaattctc 10710120  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    |||||  |||| | |||||||||||||||||||||| ||| || ||||||| || |  |||||| |||||| ||||  |||||||||||| |||||||||    
T  10710121 taaaaaatcatcttgattatcaaaatagagtttaatttaattgatatattagtttgctagtctacttaaacatagagcacattgcttattaaaatatgtt 10710220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 135 - 333
Target Start/End: Complemental strand, 22738801 - 22738601
Alignment:
Q  135 agtaatttaagcttattagtatacattaatttttt--gcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattct 232  Q
    |||||||||| ||||||||||||||||||||||||  |||| | ||||||||||||||| |||||||||||||||||| || ||||||| ||||||||      
T  22738801 agtaatttaaacttattagtatacattaattttttttgcatatttaaatgtattattataaactagaattgaaatatggtataatatatagtcaaatttc 22738702  T
Q  233 ctaaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgt 332  Q
    |||||| || |||| |||| |||||| |||||||||||||| |  ||||||| |||   ||||||||||||||||||  | ||| |||||||||| ||||    
T  22738701 ctaaaaactaatgttgattgtcaaaagagagtttaatctaattaatatattagttcactagtctatttaaacttagatcatattccttatttaaagatgt 22738602  T
Q  333 t 333  Q
    |    
T  22738601 t 22738601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 137 - 333
Target Start/End: Original strand, 660806 - 661002
Alignment:
Q  137 taatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaa 236  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||| || |||||||||||||||||||| |||||||| | |||    
T  660806 taatttaagcttattagtatacattaatttttcgcatatataaatgtattattataaactataactgaaatatgatacaatatatagtcaaattatgtaa 660905  T
Q  237 aacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    || ||||||| ||||||||||  | || ||||||||| ||   | ||| ||||  ||||| |||||||||| |  |||||| ||||||||| |||||    
T  660906 aaactcatgttgattatcaaatgataggttaatctaattgacctgttagttcgctagtctttttaaacttatatcacattgtttatttaaagatgtt 661002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 134 - 273
Target Start/End: Original strand, 2620097 - 2620236
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    |||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||| |||||||||||||||||||||||||| || ||| ||||| |    
T  2620097 cagtaatttaagcttattagtatacatttattttttgcatatttaaatgtattattataaactagaattgaaatatgatacaataaatagtccaattccc 2620196  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaa 273  Q
    ||||| || |||| ||||||||||| |||  |||||||||    
T  2620197 taaaaacttatgttgattatcaaaagagaacttaatctaa 2620236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 134 - 327
Target Start/End: Complemental strand, 39139547 - 39139353
Alignment:
Q  134 cagtaatttaagcttattagtatacattaatttttt-gcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattct 232  Q
    |||||||||||| |||||||| |||||||||||||| |||| | || || ||||||||| ||||||||||||||| ||||||||||||| |||||||||     
T  39139547 cagtaatttaagtttattagtctacattaatttttttgcatatttatatttattattataaactagaattgaaatctgatacaatatatagtcaaattcc 39139448  T
Q  233 ctaaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaa 327  Q
    ||||||  |  ||| ||||||||||| |||| ||||||||| || ||||||| ||||   |||||||||||||||||  ||||| ||||||||||    
T  39139447 ctaaaaattagtgttgattatcaaaagagagattaatctaattgatatattagttcgctggtctatttaaacttagatcacattacttatttaaa 39139353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 137 - 333
Target Start/End: Original strand, 31955608 - 31955804
Alignment:
Q  137 taatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaa 236  Q
    ||||||||  ||| ||||||||| |||||||||| || | ||| ||||||||||| |||||||||| |||||||||||||||||   ||||| || ||||    
T  31955608 taatttaactttactagtatacaataattttttgtatatttaattgtattattataaactagaattcaaatatgatacaatatacaatcaaactccctaa 31955707  T
Q  237 aacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    || |||||||  |||||| ||| ||||||||||||||  | ||||||| ||||| ||||||||||||||||||   ||||||||||||||| |||||    
T  31955708 aaactcatgttaattatcgaaagagagtttaatctaatcgatatattagttcgttagtctatttaaacttagatcgcattgcttatttaaaaatgtt 31955804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 134 - 273
Target Start/End: Complemental strand, 16998156 - 16998016
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatg-tattattatgaactagaattgaaatatgatacaatatattgtcaaattct 232  Q
    |||||||||||| ||||||||||| ||||||||||||||| | |||||| ||||||||| ||||| || | | |||||||||||||||| |||||||||     
T  16998156 cagtaatttaagtttattagtataaattaattttttgcatatttaaatggtattattataaactataacttatatatgatacaatatatagtcaaattcc 16998057  T
Q  233 ctaaaacctcatgtcgattatcaaaatagagtttaatctaa 273  Q
    |||||| ||||||| ||||||||||| ||||||||||||||    
T  16998056 ctaaaaactcatgttgattatcaaaagagagtttaatctaa 16998016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 137 - 273
Target Start/End: Original strand, 44652475 - 44652610
Alignment:
Q  137 taatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaa 236  Q
    |||||||| ||||||||||| ||||||| |||||||| | |||||| |||||||| ||||||||||||||||||||||||||||| || |||||| ||||    
T  44652475 taatttaaacttattagtatgcattaatcttttgcatatttaaatgcattattataaactagaattgaaatatgatacaatatatagttaaattc-ctaa 44652573  T
Q  237 aacctcatgtcgattatcaaaatagagtttaatctaa 273  Q
    || ||||||| ||||||||||| |||||| |||||||    
T  44652574 aaactcatgttgattatcaaaagagagttcaatctaa 44652610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 137 - 273
Target Start/End: Original strand, 3457813 - 3457947
Alignment:
Q  137 taatttaagctt-attagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctcta 235  Q
    |||||||||||| ||| |||||| |||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||| ||| ||||| |||    
T  3457813 taatttaagctttattggtatacgttaattttttgcatatataaatgtattattataaactagaatagaaatatgatacaatatatagtcgaattcccta 3457912  T
Q  236 aaacctcatgtcgattatcaaaatagagtttaatctaa 273  Q
    ||||||| |||   ||||||||| ||||||||||||||    
T  3457913 aaacctcgtgt---ttatcaaaagagagtttaatctaa 3457947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 200 - 333
Target Start/End: Original strand, 31587920 - 31588053
Alignment:
Q  200 attgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatt 299  Q
    |||||||| ||||||||||||| ||||||||  ||||||  |||||| ||||||||||| |||||||||||| | |  ||||||| ||||  ||||||||    
T  31587920 attgaaatttgatacaatatatagtcaaatttcctaaaaattcatgttgattatcaaaagagagtttaatcttattaatatattagttcgctagtctatt 31588019  T
Q  300 taaacttagacaacattgcttatttaaatatgtt 333  Q
    ||||||||||  |||||||||||||||| |||||    
T  31588020 taaacttagatcacattgcttatttaaagatgtt 31588053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 137 - 221
Target Start/End: Complemental strand, 255114 - 255030
Alignment:
Q  137 taatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatat 221  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||| || |||||||||||| |||||||    
T  255114 taatttaagcttattagtatacattaatttttcgcatatataaatgtattattataaactataactgaaatatgatataatatat 255030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 137 - 221
Target Start/End: Original strand, 846542 - 846626
Alignment:
Q  137 taatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatat 221  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||| || |||||||||||| |||||||    
T  846542 taatttaagcttattagtatacattaatttttcgcatatataaatgtattattataaactataactgaaatatgatataatatat 846626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 139 - 209
Target Start/End: Original strand, 39628724 - 39628794
Alignment:
Q  139 atttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatat 209  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||    
T  39628724 atttaagcttattagtatacattaatttttcgcatatataaatgtattattataaactagaattgaaatat 39628794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 139 - 209
Target Start/End: Original strand, 39638274 - 39638344
Alignment:
Q  139 atttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatat 209  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||    
T  39638274 atttaagcttattagtatacattaatttttcgcatatataaatgtattattataaactagaattgaaatat 39638344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 136 - 268
Target Start/End: Complemental strand, 12942359 - 12942227
Alignment:
Q  136 gtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctcta 235  Q
    |||||||||  |||||||||||||||| |||||||||||| ||||||||||||||| |||| || || ||||||  || ||||||| || ||||||| ||    
T  12942359 gtaatttaaatttattagtatacattatttttttgcatttttaaatgtattattataaacttgattttaaatatattataatatatggttaaattctata 12942260  T
Q  236 aaacctcatgtcgattatcaaaatagagtttaa 268  Q
    |||  ||||||  |  ||||||| |||||||||    
T  12942259 aaaattcatgttaaacatcaaaagagagtttaa 12942227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 135 - 213
Target Start/End: Complemental strand, 35458980 - 35458902
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgata 213  Q
    |||||||||| ||||||||| ||||||| ||||| |||| | ||||||||||||||| || ||||||||||||||||||    
T  35458980 agtaatttaaacttattagtgtacattattttttcgcatatttaaatgtattattataaattagaattgaaatatgata 35458902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 31587836 - 31587909
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaat 207  Q
    ||||||||| || |||||||| |||||||||||||||||| | || |||||||||||| |||||||||||||||    
T  31587836 cagtaattttagtttattagtctacattaattttttgcatatttatatgtattattataaactagaattgaaat 31587909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 17006458 - 17006390
Alignment:
Q  201 ttgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaatagagtttaat 269  Q
    ||||||||||||||||||||| ||||||||| |||||| || |||| ||||||||||| ||||||||||    
T  17006458 ttgaaatatgatacaatatatagtcaaattccctaaaaacttatgttgattatcaaaagagagtttaat 17006390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 17570790 - 17570858
Alignment:
Q  201 ttgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaatagagtttaat 269  Q
    ||||||||||||||||||||| ||||||||| |||||| || |||| ||||||||||| ||||||||||    
T  17570790 ttgaaatatgatacaatatatagtcaaattccctaaaaacttatgttgattatcaaaagagagtttaat 17570858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 9552699 - 9552626
Alignment:
Q  163 attttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaa 236  Q
    |||||| |||| | ||||||||||||||| ||||| ||||||| ||||||| ||||||| ||||||||||||||    
T  9552699 atttttcgcatatttaaatgtattattataaactaaaattgaattatgatataatatatagtcaaattctctaa 9552626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 333
Target Start/End: Original strand, 2621410 - 2621477
Alignment:
Q  266 taatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    |||||||| || ||||||| ||||| || |||||||||||||||  | ||||||||||||||||||||    
T  2621410 taatctaattgatatattagttcgttagactatttaaacttagatcatattgcttatttaaatatgtt 2621477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 21019978 - 21019928
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttataaatgtatt 186  Q
    |||||||||||||||||| |||||||||||||||| ||| ||||||||||||    
T  21019978 agtaatttaagcttattaatatacattaatttttt-catatataaatgtatt 21019928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 333
Target Start/End: Original strand, 17988962 - 17989031
Alignment:
Q  264 tttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    |||||||||| || ||||||| ||| | |||||||||||||||| |  |||||||||||||||| |||||    
T  17988962 tttaatctaattgatatattagttccttagtctatttaaacttaaattacattgcttatttaaagatgtt 17989031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 269
Target Start/End: Original strand, 18020142 - 18020234
Alignment:
Q  177 taaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaatagagtttaat 269  Q
    ||||||||||||||| || | ||||| |||||||||| ||||||| || || ||||||||||| | ||||| | |||  ||| ||||||||||    
T  18020142 taaatgtattattataaatttgaattaaaatatgatataatatatagtaaagttctctaaaactttatgtcaaatattgaaagagagtttaat 18020234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 333
Target Start/End: Original strand, 19972918 - 19973076
Alignment:
Q  175 tataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc-taaaacctcatgtcgattatcaaaatagagtttaatctaa 273  Q
    |||| ||||||||| || ||||| |||||||||||||||||| || ||||  ||||| | || || ||||||| |||||||| || ||||||| || ||     
T  19972918 tatanatgtattatgatcaactacaattgaaatatgatacaaaattttgttcaattcccatagaatctcatgttgattatcacaagagagtttcatttat 19973017  T
Q  274 ctggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
     || | |||||  ||   ||||||||| ||||||||  |||||||||||||||| |||||    
T  19973018 ttgatctattagctccctagtctattt-aacttagatcacattgcttatttaaagatgtt 19973076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 45322490 - 45322419
Alignment:
Q  164 ttttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctcta 235  Q
    |||||||||| | ||||| ||||||| | || ||||||||||||||||||  |||||| |||| ||||||||    
T  45322490 ttttttgcatatttaaatttattattgtaaattagaattgaaatatgatattatatatagtcatattctcta 45322419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 9552580 - 9552510
Alignment:
Q  263 gtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||||||||| | | || ||||| ||||| ||| ||||||||||||||  |||||| |||||||||||||||    
T  9552580 gtttaatctcattcgtctattagttcgttagtttatttaaacttagatcacattgtttatttaaatatgtt 9552510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 37326191 - 37326130
Alignment:
Q  177 taaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaa 238  Q
    ||||||| ||||||| | ||| |||||||  |||||| ||||||| ||||||||||||||||    
T  37326191 taaatgttttattataagctataattgaagcatgatataatatatagtcaaattctctaaaa 37326130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 333
Target Start/End: Original strand, 40554397 - 40554450
Alignment:
Q  280 tattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||||||||||| ||||||||||||||||||  ||||| ||| |||||| |||||    
T  40554397 tattaattcgttagtctatttaaacttagatcacattacttttttaaagatgtt 40554450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 11954367 - 11954307
Alignment:
Q  147 ttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaat 207  Q
    ||||||||||| ||||||||||   || | |||||| |||||||| |||||||||||||||    
T  11954367 ttattagtatatattaatttttcatatatttaaatgaattattataaactagaattgaaat 11954307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 234
Target Start/End: Original strand, 38729118 - 38729222
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttataaatgtatt-----attatgaactagaattgaaatatgatacaatatattgtcaaat 229  Q
    |||||||||| |||||||||| |||||| |||||| ||| | ||||||||||     ||||| ||| | |||| |||||||||| ||||||   ||||||    
T  38729118 agtaatttaaacttattagtacacattacttttttacatatttaaatgtattgttttattataaacaataattaaaatatgatataatatacaatcaaat 38729217  T
Q  230 tctct 234  Q
    |||||    
T  38729218 tctct 38729222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 40554293 - 40554345
Alignment:
Q  181 tgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    ||||||||||| |  ||||||| |||||||||| ||||||| |||||||||||    
T  40554293 tgtattattataatttagaatttaaatatgatataatatatagtcaaattctc 40554345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 1e-53; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 137 - 331
Target Start/End: Complemental strand, 39727436 - 39727242
Alignment:
Q  137 taatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaa 236  Q
    ||||||||| |||||||||||  |||||||||||||| | ||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| ||||    
T  39727436 taatttaagtttattagtatatgttaattttttgcatgtttaaatgtattattataaactataattgaaatatgatacaatatatagtcaaattccctaa 39727337  T
Q  237 aacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatg 331  Q
    ||  |||| | ||||||||||| ||| |||||||||| || ||||||| ||||  |||||||||||||||||| ||||||||| |||||||||||    
T  39727336 aagttcatcttgattatcaaaagagaatttaatctaattgatatattagttcgctagtctatttaaacttagataacattgctcatttaaatatg 39727242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 134 - 330
Target Start/End: Complemental strand, 25685495 - 25685299
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    |||||||||||| |||||||| |||| ||||||||||||| | || |||||||||||| ||||||||||||||| ||||||||||||| ||||||||| |    
T  25685495 cagtaatttaagtttattagtctacactaattttttgcatatttatatgtattattataaactagaattgaaatctgatacaatatatagtcaaattccc 25685396  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatat 330  Q
    |||||  | |||| ||||||||||| |||||||||||||| || ||||||| ||||  ||||||||||||||||||  | |||||||||||||||||    
T  25685395 taaaaatttatgttgattatcaaaagagagtttaatctaattgatatattagttcgctagtctatttaaacttagatcatattgcttatttaaatat 25685299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 134 - 333
Target Start/End: Complemental strand, 42672962 - 42672763
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    |||||||||| | |||||||| |||||||||||||||||| | || |||||||||||| ||||||||||||||| ||||||||||||| ||||||||||     
T  42672962 cagtaatttatgtttattagtctacattaattttttgcatatttatatgtattattataaactagaattgaaatgtgatacaatatatagtcaaattctt 42672863  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    |||||  |||||| ||||||||||| |||||||||||||| || ||||||| ||||  |||||||||||||||| |  ||||||||||||| || |||||    
T  42672862 taaaatttcatgttgattatcaaaagagagtttaatctaattgatatattagttcgctagtctatttaaacttatatcacattgcttattttaagatgtt 42672763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 135 - 333
Target Start/End: Complemental strand, 32420554 - 32420356
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctct 234  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||| ||||||||||||||||||  ||||||||| ||||| ||  ||    
T  32420554 agtaatttaagcttattagtatacattaattttttgcatatttaaatgttttattataaactagaattgaaatatggaacaatatatagtcaactttcct 32420455  T
Q  235 aaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    |||| ||||||| ||||||||||| ||||||||||| || || ||||||| || |  ||| | ||||||||||||  |||||||||||||||| |||||    
T  32420454 aaaatctcatgttgattatcaaaagagagtttaatccaattgatatattagtttgctagtttgtttaaacttagatcacattgcttatttaaaaatgtt 32420356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 137 - 273
Target Start/End: Original strand, 18330704 - 18330840
Alignment:
Q  137 taatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaa 236  Q
    ||||||||| |||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||  |||    
T  18330704 taatttaaggttattagtatacattaatttttcgcatatataaatgtattattataaactagaattgaaatatgatacaatatatagtcaaattccgtaa 18330803  T
Q  237 aacctcatgtcgattatcaaaatagagtttaatctaa 273  Q
    || ||||||| ||||||||||| | ||| ||||||||    
T  18330804 aaactcatgttgattatcaaaagatagtataatctaa 18330840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 147 - 307
Target Start/End: Original strand, 21144430 - 21144590
Alignment:
Q  147 ttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgt 246  Q
    |||||||||||||||||||||||| || ||| ||||||||||||| ||||| ||||||||||||||||||||||| ||| ||||| || |||||||||||    
T  21144430 ttattagtatacattaattttttgtatatatgaatgtattattataaactataattgaaatatgatacaatatatagtcgaattccctgaaacctcatgt 21144529  T
Q  247 cgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaactta 307  Q
     || ||||||||||||||||||||||| || | ||||| |||   ||||||||||||||||    
T  21144530 tgactatcaaaatagagtttaatctaattgatctattagttcactagtctatttaaactta 21144590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 134 - 333
Target Start/End: Complemental strand, 9271350 - 9271151
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    ||||||||||||| |||||||||||||||||| |||| || | ||||||||||||||  ||| |||||||| ||| |||||||||||| ||||||||  |    
T  9271350 cagtaatttaagcctattagtatacattaattatttgtatatttaaatgtattattaaaaacaagaattgagatacgatacaatatatagtcaaatttcc 9271251  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||||| ||||||| ||||||||||| ||| |||||||||| |  ||| ||| ||||  ||||||||||||| ||||  |||||||||||||||| |||||    
T  9271250 taaaaactcatgttgattatcaaaagagattttaatctaattaatattttagttcgctagtctatttaaacctagatcacattgcttatttaaagatgtt 9271151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 134 - 333
Target Start/End: Original strand, 28031895 - 28032094
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    |||||||||||| |||||||||| ||||||| ||||  || | ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||  |    
T  28031895 cagtaatttaagtttattagtatgcattaatcttttttatatttaaatgtattattataaactagaattgaaatatgatacaatatatagtcaaatttcc 28031994  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||||| ||||||| ||||||||||| |  ||||||||| | |  |||| ||||| |  |||| |||||||||||||  |||||||||||||||| |||||    
T  28031995 taaaaactcatgttgattatcaaaagattgtttaatctgattcatataataatttgatagtcaatttaaacttagaacacattgcttatttaaagatgtt 28032094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 141 - 333
Target Start/End: Complemental strand, 9479480 - 9479289
Alignment:
Q  141 ttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacc 240  Q
    ||||||||||||||||||||||||||||| ||| | ||||||||||||||| |||||||||||||||||||||| |||||| |||||||||  |||||      
T  9479480 ttaagcttattagtatacattaatttttt-catgtttaaatgtattattataaactagaattgaaatatgatacgatatatagtcaaattccttaaaaat 9479382  T
Q  241 tcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||| || ||||||||||| ||| ||||| |||| || ||||||| |  |  ||||||||||||| ||||   |||||||||||||||||||||    
T  9479381 tcacgttgattatcaaaagagaatttaaactaattgatatattagtcagctagtctatttaaacatagatcgcattgcttatttaaatatgtt 9479289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 137 - 273
Target Start/End: Complemental strand, 38175888 - 38175752
Alignment:
Q  137 taatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaa 236  Q
    |||||||| ||||||||||||||||||| |||  ||| |||||||||||||| || || |||||||||||||||||||||||| | ||||||||||||||    
T  38175888 taatttaaacttattagtatacattaatatttcacatatataaatgtattatcataaagtagaattgaaatatgatacaatatgtagtcaaattctctaa 38175789  T
Q  237 aacctcatgtcgattatcaaaatagagtttaatctaa 273  Q
    || ||||||| ||||||||||| | ||||||||||||    
T  38175788 aagctcatgttgattatcaaaagatagtttaatctaa 38175752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 135 - 319
Target Start/End: Original strand, 41015720 - 41015906
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttg--catttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattct 232  Q
    |||||||||| ||||||||||||||||||||||||   ||| | ||||||||||||| | ||||| |||||||||| |||||||||||| |||||||| |    
T  41015720 agtaatttaaacttattagtatacattaatttttttttcatatttaaatgtattattgtaaactataattgaaatacgatacaatatatagtcaaatttt 41015819  T
Q  233 ctaaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgct 319  Q
    | |||| ||||||| || |||||||| || | ||||| ||| || ||||||| ||||| ||||||||||||||||||  ||||||||    
T  41015820 ccaaaaactcatgttgaatatcaaaagagtgattaatttaattgatatattagttcgttagtctatttaaacttagatcacattgct 41015906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 180 - 333
Target Start/End: Original strand, 32555700 - 32555853
Alignment:
Q  180 atgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaatagagtttaatctaactggta 279  Q
    |||||||||||| ||||||||||||||| ||||||||||||| ||||||||| ||||||  |||||| ||||||||||| |||||| ||||||| || ||    
T  32555700 atgtattattataaactagaattgaaatctgatacaatatatagtcaaattccctaaaaattcatgttgattatcaaaagagagttaaatctaattgata 32555799  T
Q  280 tattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||||  |||   ||||||||||||||||||  |||||||||||||||| |||||    
T  32555800 tatttgttcactagtctatttaaacttagatcacattgcttatttaaaaatgtt 32555853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 137 - 333
Target Start/End: Original strand, 40727058 - 40727254
Alignment:
Q  137 taatttaagctt-attagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctcta 235  Q
    |||||||||||| |||||||||||||| ||||||  || ||||||||||||||||| ||||| ||| |||||||||||||||| || ||| |||| ||      
T  40727058 taatttaagctttattagtatacattatttttttaaatatataaatgtattattataaactaaaatagaaatatgatacaataaatagtcgaatt-tcct 40727156  T
Q  236 aaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||||||| ||| ||||||||||| |||||||||| ||| ||   ||||| ||||| |||| |||||||||||||  |||||||||||||||| |||||    
T  40727157 aaacctcgtgttgattatcaaaagagagtttaatttaattgaactattagttcgttagtccatttaaacttagatcacattgcttatttaaagatgtt 40727254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 137 - 302
Target Start/End: Original strand, 18879575 - 18879741
Alignment:
Q  137 taatttaagctt-attagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctcta 235  Q
    |||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||| || || ||| ||||||||||||||| ||| ||| ||||  |||    
T  18879575 taatttaagctttattagtatacattaaatttttgcatatataaatgtattattataaattaaaatagaaatatgatacaatttatagtcgaatttccta 18879674  T
Q  236 aaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaa 302  Q
    ||||||||| | ||||||||||  |||||||||| ||| ||   ||||| ||||| |||| ||||||    
T  18879675 aaacctcatattgattatcaaaggagagtttaatttaattgaactattagttcgttagtccatttaa 18879741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 137 - 269
Target Start/End: Original strand, 41937681 - 41937814
Alignment:
Q  137 taatttaagctt-attagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctcta 235  Q
    |||||||||||| |||||||||||||||||| |||||| ||||||||||||||||| ||||| |||  |||||||||||||||||  ||| |||||||||    
T  41937681 taatttaagctttattagtatacattaatttattgcatatataaatgtattattataaactacaatgaaaatatgatacaatatacagtcgaattctcta 41937780  T
Q  236 aaacctcatgtcgattatcaaaatagagtttaat 269  Q
    ||| | | ||| || |||||||||| ||||||||    
T  41937781 aaatcccgtgttgactatcaaaatatagtttaat 41937814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 139 - 270
Target Start/End: Complemental strand, 18793842 - 18793708
Alignment:
Q  139 atttaagcttattagtatacattaatttttt---gcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctcta 235  Q
    |||||| |||||||||||| | |||||||||   |||| | |||||||||||||||  |||||||||||||||||||| ||||||| |||||||||||||    
T  18793842 atttaaacttattagtataaactaatttttttttgcatatttaaatgtattattatacactagaattgaaatatgatataatatatagtcaaattctcta 18793743  T
Q  236 aaacctcatgtcgattatcaaaatagagtttaatc 270  Q
    |||  ||||||  | |||||||| |||||||||||    
T  18793742 aaaattcatgttaaatatcaaaagagagtttaatc 18793708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 333
Target Start/End: Complemental strand, 5034228 - 5034095
Alignment:
Q  202 tgaaatatgatacaata--tattgtcaaattctctaaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatt 299  Q
    ||||||||||||||| |  ||| |||||||||| ||||| ||| ||| ||||||||||| ||||||||| |||| || | ||||| ||||  ||||||||    
T  5034228 tgaaatatgatacaacacatatagtcaaattctttaaaaactcgtgttgattatcaaaagagagtttaacctaattgatctattagttcgctagtctatt 5034129  T
Q  300 taaacttagacaacattgcttatttaaatatgtt 333  Q
    ||||||| ||  ||||||||||||||||||||||    
T  5034128 taaactttgatcacattgcttatttaaatatgtt 5034095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 32684433 - 32684329
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    |||||||||||||||||| ||  ||||||| ||||||||| | |||||||| |||||| ||||||||||||||||||||| |||| || ||| |||| ||    
T  32684433 cagtaatttaagcttatttgtgaacattaaatttttgcatatttaaatgtaatattataaactagaattgaaatatgatagaatacatagtcgaattttc 32684334  T
Q  234 taaaa 238  Q
    |||||    
T  32684333 taaaa 32684329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 327
Target Start/End: Original strand, 42808900 - 42809091
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    |||||||||||||||| || | | | |||||||||||||| | ||||||||||||||| || ||| |||||||||||||| |||||||    |||||||     
T  42808900 cagtaatttaagcttactaattt-cgttaattttttgcatgtttaaatgtattattataaattag-attgaaatatgatataatatataacgaaattctt 42808997  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaa 327  Q
    |||||  ||||||  | |||||||| |||| ||||||  | ||||||| || |||||||||| |||||| ||||||  || || ||||||||||    
T  42808998 taaaaattcatgttaaatatcaaaagagagattaatcccattggtataatagttcgtcagtcaatttaaccttagatcactttacttatttaaa 42809091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 134 - 309
Target Start/End: Original strand, 42766503 - 42766677
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    |||||||||||||||| |||| ||| |||||||||| ||| | ||||||||||||||| |||||| |||||||||||||| || ||||    |||||||     
T  42766503 cagtaatttaagcttactagtctacgttaattttttacatgtttaaatgtattattataaactag-attgaaatatgatataaaatataacgaaattctt 42766601  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttaga 309  Q
    |||||  ||||||  | |||||||  |||| ||||||| | || |||| || ||||  ||||||||||| ||||||    
T  42766602 taaaaattcatgttaaatatcaaaggagagattaatctcattgatataatagttcgctagtctatttaaccttaga 42766677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 330
Target Start/End: Original strand, 34653826 - 34654018
Alignment:
Q  139 atttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctct-aaa 237  Q
    ||||||| |||||||||| |||||||||||||||  | ||||| ||| ||||| || |||| || |||||||||| ||||||| ||||| || | | |||    
T  34653826 atttaagtttattagtatgcattaattttttgcaaatttaaatttatcattataaattagagttaaaatatgatataatatatagtcaagttttttaaaa 34653925  T
Q  238 acctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatat 330  Q
    |  || | |  | || ||||| |||||||||||| | || ||||||| ||||  |||||||||||| |||||  ||||| |||||||||||||    
T  34653926 aaatcgtattaagtaacaaaagagagtttaatctcattgatatattagttcgctagtctatttaaaattagatcacattacttatttaaatat 34654018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 137 - 244
Target Start/End: Complemental strand, 25072884 - 25072778
Alignment:
Q  137 taatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaa 236  Q
    |||||||| ||||||||| ||||||| ||||| |||| | ||||||||||||||| || ||||||||||| |||||| |||||||  | || ||||||||    
T  25072884 taatttaaacttattagtttacatta-tttttcgcatatttaaatgtattattataaattagaattgaaagatgatataatatataataaagttctctaa 25072786  T
Q  237 aacctcat 244  Q
    ||| ||||    
T  25072785 aacttcat 25072778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 273
Target Start/End: Original strand, 28248911 - 28249051
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatg--atacaatatattgtcaaattc 231  Q
    |||||||||||| |||||||||||||||||| |||  ||| | ||||||||| ||||| ||||| ||||||| ||||  |||  |||||| || || |||    
T  28248911 cagtaatttaagtttattagtatacattaatctttcacatatttaaatgtatgattataaacta-aattgaagtatgctataatatatatagttaagttc 28249009  T
Q  232 tctaaaacctcatgtcgattatcaaaatagagtttaatctaa 273  Q
    | ||||| |||||||  | |||||||| ||||||||||||||    
T  28249010 tttaaaaactcatgttaaatatcaaaaaagagtttaatctaa 28249051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 269
Target Start/End: Original strand, 44736570 - 44736692
Alignment:
Q  147 ttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgt 246  Q
    |||||||||||||||||||||||  || | ||||||||||||||| ||  | ||||||||||||||| ||||||| || || || | |||||  ||||||    
T  44736570 ttattagtatacattaattttttatatatttaaatgtattattataaataataattgaaatatgatagaatatatggtaaagttttataaaatttcatgt 44736669  T
Q  247 cgattatcaaaatagagtttaat 269  Q
      | |||||||| ||||||||||    
T  44736670 taaatatcaaaagagagtttaat 44736692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 134 - 271
Target Start/End: Complemental strand, 22541450 - 22541313
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    ||||||||||||||||||| |||||||||||| ||  ||  | ||||||||| ||||| |||||  |||| ||||| ||| ||||||| ||||| ||| |    
T  22541450 cagtaatttaagcttattattatacattaattcttcacaaatttaaatgtatcattataaactacgattggaatataatataatatatagtcaagttcac 22541351  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatct 271  Q
    |||||  | ||||  | |||||||| ||||||||||||    
T  22541350 taaaaaataatgttaaatatcaaaagagagtttaatct 22541313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 10577699 - 10577621
Alignment:
Q  193 aactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaatagagtttaatct 271  Q
    ||||| |||||||||||||||  |||||||||||||||||||||||  ||||||  | |||| ||| ||||||||||||    
T  10577699 aactaaaattgaaatatgatatcatatattgtcaaattctctaaaatatcatgttaaatatctaaagagagtttaatct 10577621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 22165926 - 22166031
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatg--atacaatatattgtcaaattct 232  Q
    ||||||||||| |||||||||||  ||  ||||| || | |  |||||||||||||| ||||||||||||||||||  ||| |||||||  |||||||||    
T  22165926 agtaatttaagtttattagtataatttgttttttggcctattcaaatgtattattataaactagaattgaaatatgatatataatatataatcaaattct 22166025  T
Q  233 ctaaaa 238  Q
    ||||||    
T  22166026 ctaaaa 22166031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 22224633 - 22224738
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatg--atacaatatattgtcaaattct 232  Q
    ||||||||||| |||||||||||  ||  ||||| || | |  |||||||||||||| ||||||||||||||||||  ||| |||||||  |||||||||    
T  22224633 agtaatttaagtttattagtataatttgttttttggcctattcaaatgtattattataaactagaattgaaatatgatatataatatataatcaaattct 22224732  T
Q  233 ctaaaa 238  Q
    ||||||    
T  22224733 ctaaaa 22224738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 244
Target Start/End: Original strand, 37155492 - 37155601
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctct 234  Q
    ||||||| ||||||||||||  |||||| |||||  ||| | |||| |||||||||| || ||||||||| |||||||| || |||| || || ||||||    
T  37155492 agtaattcaagcttattagttaacattattttttcacatatttaaacgtattattataaattagaattgagatatgatataacatatagtaaagttctct 37155591  T
Q  235 aaaacctcat 244  Q
    ||||| ||||    
T  37155592 aaaacttcat 37155601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 326
Target Start/End: Complemental strand, 38566819 - 38566627
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaa-ttgaaatatgatacaatatattgtcaaattct 232  Q
    |||| ||||||| |||||||| || |||| ||||| | || | |||||||| |||||| ||||| || ||||||||||||| ||||| | ||||| ||||    
T  38566819 cagtgatttaagtttattagt-tatattagtttttcgtatatttaaatgtaatattataaactataaattgaaatatgatataatatgtagtcaagttct 38566721  T
Q  233 ctaaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaa 326  Q
    | ||||  ||||||  | |||||||| |||||||||||| | || | ||||| || | || |||||||||| |||||  ||| | |||||||||    
T  38566720 ccaaaaattcatgttaagtatcaaaagagagtttaatctcattgatctattagttagacaatctatttaaatttagatcacaatacttatttaa 38566627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 169
Target Start/End: Complemental strand, 29706988 - 29706953
Alignment:
Q  134 cagtaatttaagcttattagtatacattaatttttt 169  Q
    ||||||||||||||||||||||||||||||||||||    
T  29706988 cagtaatttaagcttattagtatacattaatttttt 29706953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 36576141 - 36576215
Alignment:
Q  137 taatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgat 212  Q
    ||||||||||| ||||||||||||||||||||   || | ||||||| ||||||| |||||||| |||||||||||    
T  36576141 taatttaagct-attagtatacattaatttttcatatatttaaatgttttattataaactagaaatgaaatatgat 36576215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 651592 - 651648
Alignment:
Q  156 tacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgat 212  Q
    |||||||||||||| ||| | ||||||||||||| | || |||||||||||||||||    
T  651592 tacattaattttttacatatttaaatgtattattttaaaatagaattgaaatatgat 651648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 37034477 - 37034433
Alignment:
Q  177 taaatgtattattatgaactagaattgaaatatgatacaatatat 221  Q
    ||||||||||||||  ||||||||||||||| ||||| |||||||    
T  37034477 taaatgtattattacaaactagaattgaaatttgatataatatat 37034433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 2e-52; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 134 - 333
Target Start/End: Complemental strand, 51370416 - 51370214
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaa---ttgaaatatgatacaatatattgtcaaatt 230  Q
    |||||||||||||||||||||||||||||||||||||||| | | ||||||||||||| ||||||||   ||||||||||||||||||||| || |||||    
T  51370416 cagtaatttaagcttattagtatacattaattttttgcatatttgaatgtattattataaactagaaaaattgaaatatgatacaatatatagttaaatt 51370317  T
Q  231 ctctaaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatat 330  Q
       |||||  |||||| ||||||||||| |||||||||||||| || ||||||  ||||| |||||| |||||||||||  |||||||||||||||||||    
T  51370316 tcttaaaaattcatgttgattatcaaaagagagtttaatctaattgatatatttgttcgttagtctagttaaacttagatcacattgcttatttaaatat 51370217  T
Q  331 gtt 333  Q
    |||    
T  51370216 gtt 51370214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 134 - 333
Target Start/End: Complemental strand, 30562471 - 30562272
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    |||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||| || ||||||||||||||||||||||||||  |||||||| |    
T  30562471 cagtaatttaagtttattagtatacattaattttttgcatatttaaatgtattattataaattagaattgaaatatgatacaatatataatcaaattccc 30562372  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||||| ||||| | ||||||||||| | |||||||| ||| || ||||||| || |  ||||||||||||||||||  |||||| ||||||||| |||||    
T  30562371 taaaaactcatcttgattatcaaaagatagtttaatataattgatatattagtttgctagtctatttaaacttagatcacattgattatttaaagatgtt 30562272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 134 - 333
Target Start/End: Original strand, 16010523 - 16010722
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    |||||||||||||||||||||||| ||||||||||||||| | || |||||||||||| ||||| ||||||||||||||||||||||| ||||||||  |    
T  16010523 cagtaatttaagcttattagtataaattaattttttgcatatttatatgtattattataaactataattgaaatatgatacaatatatagtcaaatttcc 16010622  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||||| ||||||| ||||||||||| |||||||||| ||| || ||||||| ||||  |||||||||| ||||| |  |||||| | ||||||| |||||    
T  16010623 taaaaactcatgttgattatcaaaagagagtttaatataattgatatattagttcgctagtctatttacacttaaatcacattgatgatttaaagatgtt 16010722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 135 - 333
Target Start/End: Complemental strand, 4362398 - 4362200
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctct 234  Q
    |||||||||||||||| ||||||||||||| |||||||| | ||||||||||||||| ||||| ||||||||||||||||| ||||| ||||||||| ||    
T  4362398 agtaatttaagcttatcagtatacattaatgttttgcatatttaaatgtattattataaactaaaattgaaatatgatacattatatagtcaaattccct 4362299  T
Q  235 aaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    |||| ||||| | ||||||||||  |||||||||||||| |  ||||||| | |   |||||||||||||||| |  |||||||||||||||| |||||    
T  4362298 aaaaactcatcttgattatcaaaggagagtttaatctaatttatatattagtccactagtctatttaaacttaaatcacattgcttatttaaaaatgtt 4362200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 134 - 323
Target Start/End: Complemental strand, 27089897 - 27089705
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    ||||||||||||||||||||||||||||  |||||| ||| | ||||||||||||||| ||||| |||||||||||||||||||||||  ||||||||||    
T  27089897 cagtaatttaagcttattagtatacattgcttttttacatatttaaatgtattattataaactaaaattgaaatatgatacaatatataatcaaattctc 27089798  T
Q  234 t---aaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatt 323  Q
    |   |||| ||||| | ||||||||||| |||||||||||||| || ||||||| ||||  ||||||| ||||||||||  |||||| |||||    
T  27089797 taaaaaaaactcatcttgattatcaaaagagagtttaatctaattgatatattagttcgctagtctatctaaacttagatcacattgtttatt 27089705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 137 - 333
Target Start/End: Original strand, 45756110 - 45756306
Alignment:
Q  137 taatttaagctt-attagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctcta 235  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||| ||||| ||||||||||||||||| ||||| ||  | ||| |||    
T  45756110 taatttaagctttattagtatacattaattttttgcatctataaatgt-ttattataaactataattgaaatatgatacagtatatagttgatttcccta 45756208  T
Q  236 aaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||| ||| ||| ||||||||||| ||||||||||||||  |   ||||||||||| |||| |||||||||||||  ||||||| ||||||||||||||    
T  45756209 aaatctcgtgttgattatcaaaagagagtttaatctaatagaactattaattcgttagtccatttaaacttagatcacattgcatatttaaatatgtt 45756306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 177 - 333
Target Start/End: Original strand, 8424392 - 8424548
Alignment:
Q  177 taaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaatagagtttaatctaactg 276  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||| ||||| ||||||| |||||||||||  ||||||||||||||||    
T  8424392 taaatgtattattataaactaaaattgaaatatgatacaatatatagtcaaattctttaaaaactcatgttgattatcaaaagtgagtttaatctaactg 8424491  T
Q  277 gtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
     ||||||| ||||| |||||||||||| || ||  |||||| ||||||||| |||||    
T  8424492 atatattagttcgttagtctatttaaattttgatcacattgtttatttaaagatgtt 8424548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 137 - 333
Target Start/End: Original strand, 11751538 - 11751733
Alignment:
Q  137 taatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaa 236  Q
    |||||||| |||||||||||| |||| |||||| ||| ||||| | ||||||||| |||||||| | |||||||||||||||||| ||||||||||||||    
T  11751538 taatttaaacttattagtatatattagtttttt-catatataattttattattataaactagaaataaaatatgatacaatatatagtcaaattctctaa 11751636  T
Q  237 aacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    |||||||||| ||||||||||| |||||||||||||| || | ||||| || |   |||||||||||||||||  |||||| |||| |||| |||||    
T  11751637 aacctcatgttgattatcaaaagagagtttaatctaattgatctattagtttgctggtctatttaaacttagatcacattgtttatgtaaagatgtt 11751733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 154 - 333
Target Start/End: Original strand, 7287148 - 7287327
Alignment:
Q  154 tatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattat 253  Q
    |||||||||| ||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||  ||| |||| ||||||||||| ||| ||||||    
T  7287148 tatacattaagtttttgcatatataaatgtattattataaactagaatagaaatatgatacaatatacagtcgaattttctaaaacctcgtgttgattat 7287247  T
Q  254 caaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||||| |||||||||| ||| ||   ||||| ||| | |||| |||||||||||||  |||||||||||||||| |||||    
T  7287248 caaaagagagtttaatttaattgaactattagttcattagtccatttaaacttagatcacattgcttatttaaagatgtt 7287327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 137 - 333
Target Start/End: Original strand, 25412199 - 25412396
Alignment:
Q  137 taatttaagctt-attagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctcta 235  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||| ||| ||||| |||    
T  25412199 taatttaagctttattagtatacattaattttttgcatatataaatgtattattataaactagaatagaaatatgatacaatatatagtcgaattcccta 25412298  T
Q  236 aaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||||||| ||| ||| ||  ||| |||||||||| ||| ||   ||||| || || |||| ||||||| |||||  ||||| |||||||||| |||||    
T  25412299 aaacctcgtgttgatcatgtaaagagagtttaatttaattgaactattagtttgttagtccatttaaatttagatcacattacttatttaaagatgtt 25412396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 139 - 327
Target Start/End: Complemental strand, 45377999 - 45377810
Alignment:
Q  139 atttaagcttattagtatacattaatttttt-gcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaa 237  Q
    ||||||| ||||||||||| ||||||||||| |||| | ||||||||||||||  |||||||||||| |||||||||| ||||| || |||||| |||||    
T  45377999 atttaagattattagtataaattaatttttttgcatatttaaatgtattattacaaactagaattgatatatgatacagtatatagttaaattccctaaa 45377900  T
Q  238 acctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaa 327  Q
    | ||||||| ||||||||||| |||||||||||||| || ||||||| ||||  |||||||||| |||||||  |||||| | |||||||    
T  45377899 aactcatgttgattatcaaaagagagtttaatctaattgatatattagttcgctagtctatttacacttagatcacattgttgatttaaa 45377810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 134 - 317
Target Start/End: Complemental strand, 20953217 - 20953031
Alignment:
Q  134 cagtaatttaagcttatta---gtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaatt 230  Q
    |||||||||||| ||||||   ||||||||||||||||  ||| | ||||||||||||||| ||||| |||||||||||||||| |||||| | ||||||    
T  20953217 cagtaatttaagtttattacttgtatacattaatttttcacatatttaaatgtattattataaactataattgaaatatgatacgatatatagccaaatt 20953118  T
Q  231 ctctaaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattg 317  Q
    |||||||| ||||||||||||||||||| |||||| ||||||| || ||||||| |  |  | ||||||||||||||||| ||||||    
T  20953117 ctctaaaatctcatgtcgattatcaaaagagagttcaatctaattgatatattagtctgctaatctatttaaacttagaccacattg 20953031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 137 - 333
Target Start/End: Original strand, 47295625 - 47295825
Alignment:
Q  137 taatttaagcttattagtatacattaattttttg----catttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattct 232  Q
    ||||| |||||||||||||||||||||||||||     ||| | ||||  ||||||||| ||||||||||||||||||||  ||||||| ||||||||      
T  47295625 taattcaagcttattagtatacattaattttttttcttcatatttaaacatattattataaactagaattgaaatatgatcaaatatatagtcaaatttc 47295724  T
Q  233 ctaaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgt 332  Q
     ||||| ||||||| ||||||||||| |||||||||| ||| || ||||||| ||||  ||||||||||||||||||  |||||||||||||||| ||||    
T  47295725 ttaaaaactcatgttgattatcaaaagagagtttaatataaatgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgt 47295824  T
Q  333 t 333  Q
    |    
T  47295825 t 47295825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 135 - 273
Target Start/End: Original strand, 1825095 - 1825235
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttat--aaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattct 232  Q
    ||||||||||| ||||||||||||||||||||||| ||| |||  |||||||||||||| |||||||||||||||||||||| |||||| ||||||||      
T  1825095 agtaatttaaggttattagtatacattaattttttacatatatttaaatgtattattataaactagaattgaaatatgatacgatatatagtcaaatttc 1825194  T
Q  233 ctaaaacctcatgtcgattatcaaaatagagtttaatctaa 273  Q
    ||||||  |||||| ||||||||||||||| ||||||||||    
T  1825195 ctaaaaattcatgttgattatcaaaatagattttaatctaa 1825235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 6136154 - 6136034
Alignment:
Q  137 taatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaa 236  Q
    ||||||||||||||||||||||||||||||||||||| | |||||  |||||||| ||||||||||||||||||||||||||||| ||||||||  ||||    
T  6136154 taatttaagcttattagtatacattaattttttgcatgtttaaatacattattataaactagaattgaaatatgatacaatatatagtcaaatttcctaa 6136055  T
Q  237 aacctcatgtcgattatcaaa 257  Q
    || ||||||| ||||||||||    
T  6136054 aaactcatgttgattatcaaa 6136034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 134 - 333
Target Start/End: Complemental strand, 2759214 - 2759015
Alignment:
Q  134 cagtaatttaagcttattagtatacattaatttttt--gcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattc 231  Q
    ||||||||||||||||||| || |||||||||||||  |||| | |||| |||||||||  |||||||||||  |||||||||||||||  |||||||||    
T  2759214 cagtaatttaagcttattaataaacattaattttttttgcatatttaaacgtattattacaaactagaattgttatatgatacaatata--gtcaaattc 2759117  T
Q  232 tctaaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatg 331  Q
     |||||| ||||||   |||||||||| |||||||||||||| || ||||||| ||||  | || |||||||||||||  |||||| |||||||||||||    
T  2759116 cctaaaaactcatggtaattatcaaaagagagtttaatctaattgatatattagttcgctaatcaatttaaacttagatcacattgtttatttaaatatg 2759017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 134 - 321
Target Start/End: Complemental strand, 39737497 - 39737311
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    ||||||||||||||||||||||||| |||||||||| ||| | ||| |||||||||||  |||| ||||||||||| ||| |||||||  ||||||| ||    
T  39737497 cagtaatttaagcttattagtatacgttaattttttccatatttaa-tgtattattatatactataattgaaatattatataatatataatcaaattatc 39737399  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgctta 321  Q
    |||||  |||| | ||||||||||| |||||||||||||| || ||||||  || || ||||||||||||||||||  ||||||||||    
T  39737398 taaaaagtcatcttgattatcaaaagagagtttaatctaattgatatatttgtttgttagtctatttaaacttagattacattgctta 39737311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 134 - 309
Target Start/End: Complemental strand, 45339277 - 45339100
Alignment:
Q  134 cagtaatttaagcttattagtatacattaatttttt-gcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattct 232  Q
    |||||||||||||||||||||||||||||||||||| |||| | ||||| ||||||||| ||||| ||||||||||||||||||||||| || |||||||    
T  45339277 cagtaatttaagcttattagtatacattaatttttttgcatatttaaatatattattataaactataattgaaatatgatacaatatatagt-aaattct 45339179  T
Q  233 ctaaaacctcatgtcgat--tatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttaga 309  Q
    |||||| ||||| |  ||  |||||||| ||||| |||||||| || ||||||| || |  ||||||||||||||||||    
T  45339178 ctaaaaactcatctttattatatcaaaagagagtataatctaattgatatattagtttgctagtctatttaaacttaga 45339100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 137 - 273
Target Start/End: Original strand, 41157932 - 41158069
Alignment:
Q  137 taatttaagctt-attagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctcta 235  Q
    |||||||||||| ||||||||||||||||||||| ||| ||||||| ||||||||| ||||||||| || |||||||||||||||| ||| | ||| |||    
T  41157932 taatttaagctttattagtatacattaattttttacatatataaatttattattataaactagaatagacatatgatacaatatatagtcgagttcccta 41158031  T
Q  236 aaacctcatgtcgattatcaaaatagagtttaatctaa 273  Q
    ||||||| ||| ||||||||||  ||||||||||||||    
T  41158032 aaacctcgtgttgattatcaaatgagagtttaatctaa 41158069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 137 - 333
Target Start/End: Complemental strand, 46998279 - 46998086
Alignment:
Q  137 taatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaa 236  Q
    |||||||||||||||||||||||||| | |||||||| | ||||||||||||      ||||||||||||||||||||||||||| || |||||||||||    
T  46998279 taatttaagcttattagtatacattattattttgcatatttaaatgtattat------ctagaattgaaatatgatacaatatatagtaaaattctctaa 46998186  T
Q  237 aac---ctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||    ||||| |  ||||  |||| |||||||||||||| |  |||||||||| ||  |||||||||||||||||  |||||||||||| ||| |||||    
T  46998185 aaaaaactcatatttattagtaaaagagagtttaatctaattaatatattaatttgttggtctatttaaacttagatcacattgcttattaaaagatgtt 46998086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 3022799 - 3022704
Alignment:
Q  137 taatttaagcttattagtatacattaatttttt-gcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattc 231  Q
    ||||||||||||||| ||||||||||||||||| |||| | ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  3022799 taatttaagcttatttgtatacattaatttttttgcatatttaaatgtattattataaactagaattgaaatatgatacaatatatagtcaaattc 3022704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 159 - 325
Target Start/End: Original strand, 642623 - 642789
Alignment:
Q  159 attaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaa 258  Q
    ||||||||||||||| ||||||||||||||||| || |||||| |||||||||| |||||||| ||| ||||| |||||||||  ||| |||||| ||||    
T  642623 attaattttttgcatatataaatgtattattataaattagaatagaaatatgatgcaatatatagtcgaattcgctaaaaccttgtgttgattatgaaaa 642722  T
Q  259 tagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttattta 325  Q
     |||||||||| ||| ||   ||||| |||   |||| |||||||||||||  ||||||||||||||    
T  642723 gagagtttaatttaattgaactattagttcactagtccatttaaacttagatcacattgcttattta 642789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 147 - 333
Target Start/End: Original strand, 4441093 - 4441280
Alignment:
Q  147 ttattagtatacattaattttttgcatttataaatgtatta-ttatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatg 245  Q
    |||||||||||||||||||||||| || ||||||||||||| |||| ||||| ||| ||||||||||| |||||||  || ||||| |||||| ||  ||    
T  4441093 ttattagtatacattaattttttgaatatataaatgtattatttataaactataatagaaatatgatataatatatattcgaattccctaaaatctagtg 4441192  T
Q  246 tcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    | ||||||||||| |||||||||||||| ||   ||||| |||   |||| |||||||||||||  ||||| | |||||||| |||||    
T  4441193 ttgattatcaaaagagagtttaatctaattgaattattagttcactagtccatttaaacttagatcacatttcatatttaaagatgtt 4441280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 147 - 221
Target Start/End: Original strand, 3839238 - 3839312
Alignment:
Q  147 ttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatat 221  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| || |||||| |||||||||||||||||||    
T  3839238 ttattagtatacattaattttttgcatatataaatgtattattataaattagaatagaaatatgatacaatatat 3839312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 135 - 269
Target Start/End: Complemental strand, 22863447 - 22863313
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctct 234  Q
    |||||||||||||||||||| ||||||| ||||| |||| | ||||||||||||||| || |||||||||||||||||| ||||||| |  || ||||||    
T  22863447 agtaatttaagcttattagtttacattattttttcgcatatttaaatgtattattataaattagaattgaaatatgatataatatatagcaaagttctct 22863348  T
Q  235 aaaacctcatgtcgattatcaaaatagagtttaat 269  Q
    ||||| ||| ||  | |||| ||| ||||||||||    
T  22863347 aaaacttcaggttaaatatcgaaagagagtttaat 22863313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 194 - 333
Target Start/End: Original strand, 10157958 - 10158098
Alignment:
Q  194 actagaattgaaatatgatacaatatattgtcaaattctc-taaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtca 292  Q
    |||| |||||||||||||||||||||||||| ||| | || |||||| |||||| |||||||||||||||||||||| ||| ||   ||||| ||    |    
T  10157958 actaaaattgaaatatgatacaatatattgttaaaatttcctaaaacatcatgttgattatcaaaatagagtttaatttaattgaactattagtttacta 10158057  T
Q  293 gtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    |||||||||||||||||  |||||||||||||||| |||||    
T  10158058 gtctatttaaacttagatcacattgcttatttaaagatgtt 10158098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 137 - 238
Target Start/End: Original strand, 4402109 - 4402210
Alignment:
Q  137 taatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaa 236  Q
    |||||||||  ||||| | |||||||||||||||||| | ||||||||||||||| || |||||||||||||||||| ||||||| || || ||||||||    
T  4402109 taatttaagtatattaatttacattaattttttgcatatttaaatgtattattataaattagaattgaaatatgatataatatatagtaaagttctctaa 4402208  T
Q  237 aa 238  Q
    ||    
T  4402209 aa 4402210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 273
Target Start/End: Original strand, 37696600 - 37696680
Alignment:
Q  193 aactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaatagagtttaatctaa 273  Q
    |||||||||| ||||||||||||||||||  ||||||||||||||||||||||| |||||| |||| ||| ||||||||||    
T  37696600 aactagaattaaaatatgatacaatatataatcaaattctctaaaacctcatgttgattattaaaaaagactttaatctaa 37696680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 35718623 - 35718518
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatg--atacaatatattgtcaaattct 232  Q
    ||||||||||| |||||||||||| || ||||||||||| |  ||||||||||| || ||||||||||||||||||  ||| |||||||  |||||||||    
T  35718623 agtaatttaagtttattagtatactttgattttttgcatattcaaatgtattatgataaactagaattgaaatatgatatataatatataatcaaattct 35718524  T
Q  233 ctaaaa 238  Q
    ||||||    
T  35718523 ctaaaa 35718518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 213
Target Start/End: Original strand, 3532785 - 3532860
Alignment:
Q  138 aatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgata 213  Q
    |||||||  |||||||| |||| ||||||||||||| | |||||||||||||||||| ||||||||||||||||||    
T  3532785 aatttaaaattattagtctacaataattttttgcatatttaaatgtattattatgaaatagaattgaaatatgata 3532860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 238
Target Start/End: Original strand, 45621527 - 45621627
Alignment:
Q  138 aatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaa 237  Q
    ||||||| ||||||||||| |||||||| ||||||| | ||||||||||||||  ||||| |||||||||| |||  ||||||| || ||||| ||||||    
T  45621527 aatttaaccttattagtatccattaattctttgcatatttaaatgtattattacaaactataattgaaatacgatcaaatatatagtaaaattatctaaa 45621626  T
Q  238 a 238  Q
    |    
T  45621627 a 45621627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 37696189 - 37696240
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtat 185  Q
    |||| ||| ||||||||||||||||||||||||||||||| |||||||||||    
T  37696189 cagttattgaagcttattagtatacattaattttttgcatatataaatgtat 37696240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 157 - 309
Target Start/End: Complemental strand, 65305 - 65149
Alignment:
Q  157 acattaattttttgcatttata---aatg-tattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgatta 252  Q
    ||||||||||||||||| ||||   |||| ||||||||| ||||||||||| ||||| ||| |||| || ||||||||||||||||| |||| |  | ||    
T  65305 acattaattttttgcatatatatttaatggtattattataaactagaattgtaatataatataatagatagtcaaattctctaaaacttcattttaaata 65206  T
Q  253 tcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttaga 309  Q
    | ||||  ||||||||| | | || | |||| |||||| | | ||||||||||||||    
T  65205 taaaaaatgagtttaattttaatgatctattgattcgttactatatttaaacttaga 65149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 139 - 209
Target Start/End: Complemental strand, 11862750 - 11862680
Alignment:
Q  139 atttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatat 209  Q
    ||||||| ||||||||||||||||||||||  ||| |  ||||||||||| || |||||||||||||||||    
T  11862750 atttaagtttattagtatacattaatttttcccatatgcaaatgtattatcataaactagaattgaaatat 11862680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 134 - 209
Target Start/End: Complemental strand, 28397604 - 28397533
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatat 209  Q
    ||||| ||||||||||||||||||||||| |||||||||| | |||    |||||||| |||||||||||||||||    
T  28397604 cagtactttaagcttattagtatacattagttttttgcatatttaa----attattataaactagaattgaaatat 28397533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 233 - 333
Target Start/End: Original strand, 3839338 - 3839438
Alignment:
Q  233 ctaaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgt 332  Q
    ||||||||||  || |||||||||||  ||||||||||||| ||   ||||| ||||| ||| | ||||||||||||  |||||||||||||||| ||||    
T  3839338 ctaaaacctcgcgttgattatcaaaagtgagtttaatctaattgaactattagttcgttagtttgtttaaacttagatcacattgcttatttaaagatgt 3839437  T
Q  333 t 333  Q
    |    
T  3839438 t 3839438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 213
Target Start/End: Original strand, 14346170 - 14346245
Alignment:
Q  138 aatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgata 213  Q
    |||| |||||||||||||||||| | |||||||||| | ||| ||||||||||| |   |||||||||||||||||    
T  14346170 aattcaagcttattagtatacataagttttttgcatatttaactgtattattataagtaagaattgaaatatgata 14346245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 35879782 - 35879688
Alignment:
Q  177 taaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaatagagtttaatct 271  Q
    ||||||||||| ||| ||||| |||||||||||||||  ||| || || |||||||||||||  ||||||  | ||||||||  |||||||||||    
T  35879782 taaatgtattactataaactaaaattgaaatatgatatcataaatagttaaattctctaaaatgtcatgttaaatatcaaaaaggagtttaatct 35879688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 333
Target Start/End: Original strand, 17391566 - 17391763
Alignment:
Q  137 taatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctct-a 235  Q
    ||||||||  || ||||||||||||| ||||| |||| | |||||||| |||||| |||||||| |  ||||||||| ||||||| || |  || ||| |    
T  17391566 taatttaaagttgttagtatacattattttttcgcatatttaaatgtactattataaactagaactataatatgatataatatatagttacgttttctaa 17391665  T
Q  236 aaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    |||  |||||| || ||||||||  ||||||||| | | |  ||||||| ||||| |||| ||||||| | | |  ||||| |||||||||| |||||    
T  17391666 aaatttcatgttgaatatcaaaagtgagtttaattttattcatatattagttcgttagtccatttaaattaatatcacattacttatttaaagatgtt 17391763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 23981326 - 23981418
Alignment:
Q  146 cttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaa 238  Q
    ||||||||||||| ||| ||||| |||  | ||||||||||||| | || || ||||||||||||||| ||||||| || | | |||||||||    
T  23981326 cttattagtatacgttattttttcgcaaatttaaatgtattattttaaattataattgaaatatgatataatatatagttatactctctaaaa 23981418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 173
Target Start/End: Original strand, 642567 - 642604
Alignment:
Q  137 taatttaagctt-attagtatacattaattttttgcat 173  Q
    |||||||||||| |||||||||||||||||||||||||    
T  642567 taatttaagctttattagtatacattaattttttgcat 642604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 23757182 - 23757267
Alignment:
Q  136 gtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatat 221  Q
    |||||||||| ||||  |||  |||||||||||  ||| | || |||||||||||| || ||||||| |||||||||| |||||||    
T  23757182 gtaatttaagtttatcggtacccattaatttttcacatgtttagatgtattattataaattagaatttaaatatgatataatatat 23757267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 17616978 - 17617022
Alignment:
Q  183 tattattatgaactagaattgaaatatgatacaatatattgtcaa 227  Q
    ||||||||| || ||||||||||||||||||  ||||||||||||    
T  17616978 tattattataaattagaattgaaatatgatatcatatattgtcaa 17617022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 309
Target Start/End: Original strand, 18379174 - 18379321
Alignment:
Q  161 taattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaata 260  Q
    |||||||| |||| |  |||||||||||||  ||||| ||||||||||||||| ||||||| ||||| || |||| ||  | ||||  | ||||||||      
T  18379174 taatttttcgcatattcaaatgtattattaa-aactataattgaaatatgatataatatatagtcaatttatctacaaattaatgttaaatatcaaaagg 18379272  T
Q  261 gagtttaatctaactggtatattaattcgtcagtctatttaaacttaga 309  Q
    ||||||||| | | || | ||||||||||  |||||||| ||| |||||    
T  18379273 gagtttaatatcaatgatctattaattcgatagtctattcaaaattaga 18379321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 3e-51; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 147 - 333
Target Start/End: Complemental strand, 9504012 - 9503826
Alignment:
Q  147 ttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgt 246  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||| ||| ||||  ||||||||||||||    
T  9504012 ttattagtatacattaattttttgcatatataaatgtattattataaactagaatagaaatatgatacaatatatagtcgaatttcctaaaacctcatgt 9503913  T
Q  247 cgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
     ||||||| ||| |||||||||||||| ||   ||||| ||||  |||| |||||||||||||  |||||||||||||||| |||||    
T  9503912 tgattatctaaagagagtttaatctaattgaattattagttcgctagtccatttaaacttagatcacattgcttatttaaagatgtt 9503826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 141 - 307
Target Start/End: Complemental strand, 20601786 - 20601619
Alignment:
Q  141 ttaagcttattagtatacattaattttttgc-atttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaac 239  Q
    ||||| ||||||||||||||||||||||||  || | ||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| ||||||     
T  20601786 ttaagtttattagtatacattaattttttggtatatttaaatgtattattataaactataattgaaatatgatacaatatatagtcaaattccctaaaaa 20601687  T
Q  240 ctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaactta 307  Q
    ||||||| |||||||||||  ||||||||||||| || ||||||| ||||| ||||||||||||||||    
T  20601686 ctcatgttgattatcaaaagggagtttaatctaattgatatattagttcgttagtctatttaaactta 20601619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 135 - 333
Target Start/End: Original strand, 21523722 - 21523921
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaat-tctc 233  Q
    |||||||||||||||||||  |||||||||||||||||| | || |||||||||||| ||||| ||||||||| ||||||||||||| |||||||  | |    
T  21523722 agtaatttaagcttattagcctacattaattttttgcatatttatatgtattattataaactaaaattgaaatctgatacaatatatagtcaaatacccc 21523821  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    |||||  |||||| ||||||||||| |||| ||||||||| || ||||||| ||||  ||||||||||||||||||  |||||||||||||||| |||||    
T  21523822 taaaaattcatgttgattatcaaaagagagattaatctaattgatatattagttcgctagtctatttaaacttagatcacattgcttatttaaagatgtt 21523921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 137 - 327
Target Start/End: Original strand, 51880168 - 51880359
Alignment:
Q  137 taatttaagctt-attagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctcta 235  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||  |||||||||||||||||| |||||||| ||||    
T  51880168 taatttaagctttattagtatacattaattttttgcatgtataaatgtattattataaactagaataaaaatatgatacaatatatagtcaaattttcta 51880267  T
Q  236 aaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaa 327  Q
    ||||||| ||| ||||||||||| |||||||||||||| ||    |||| || |  |||| |||||||||||||  |||||||||| |||||    
T  51880268 aaacctcgtgttgattatcaaaagagagtttaatctaattgaacaattagtttgctagtccatttaaacttagatcacattgcttacttaaa 51880359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 134 - 333
Target Start/End: Complemental strand, 22990712 - 22990509
Alignment:
Q  134 cagtaatttaagcttattagtatacattaat----tttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaat 229  Q
    |||||||||||||||||||||||||||||||    ||||||||| | ||||| ||||||||| ||||| ||||||||||||||||||||||| |||||||    
T  22990712 cagtaatttaagcttattagtatacattaataatttttttgcatatttaaatatattattataaactataattgaaatatgatacaatatatagtcaaat 22990613  T
Q  230 tctctaaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaata 329  Q
    || ||||||  |||| |  |||||| ||| |||||||||||||| || |||||||||| || |||||||||||||||| |  |||||||||||| ||| |    
T  22990612 tccctaaaaattcatttttattatctaaagagagtttaatctaattgatatattaatttgttagtctatttaaacttatatcacattgcttattaaaaga 22990513  T
Q  330 tgtt 333  Q
    ||||    
T  22990512 tgtt 22990509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 137 - 332
Target Start/End: Complemental strand, 27048765 - 27048570
Alignment:
Q  137 taatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaa 236  Q
    ||||||||  |||||||||||||||||||||| |||| ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||   |||    
T  27048765 taatttaacattattagtatacattaatttttcgcatatataaatgtattattataaactataattgaaatatgatacaatatatagtcaaatttcgtaa 27048666  T
Q  237 aacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgt 332  Q
    || ||||||| ||||||||||| | |||||||||| | || | ||||||||||  |||||||||||||||| |  |||||  ||||||||| ||||    
T  27048665 aaactcatgttgattatcaaaagatagtttaatcttattgatctattaattcggtagtctatttaaacttatattacattagttatttaaagatgt 27048570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 134 - 301
Target Start/End: Original strand, 29563555 - 29563721
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    |||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||| ||||||||||||||||||||||||||||| || |||||  |    
T  29563555 cagtaatttaagcttattagtatacattaattttatgcatatttaaatgtattattataaactagaattgaaatatgatacaatatatagttaaatttcc 29563654  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctattta 301  Q
    ||||| ||| | | ||||||||||| |||||||||||||| || ||||||| ||||  ||||||||||    
T  29563655 taaaaactc-ttttgattatcaaaagagagtttaatctaattgatatattagttcgctagtctattta 29563721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 162 - 333
Target Start/End: Complemental strand, 29697657 - 29697486
Alignment:
Q  162 aattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaatag 261  Q
    ||||||||| || | ||||||||||||||| ||||||||||||||||| |||| |||||| |||||||||  ||||| ||||||| ||||||||||| ||    
T  29697657 aattttttgtatatttaaatgtattattataaactagaattgaaatataataccatatatagtcaaattccgtaaaaactcatgttgattatcaaaagag 29697558  T
Q  262 agtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    |||||||||||| |  ||||||| ||||| ||||||||||||||||||   ||||||||||||||| |||||    
T  29697557 agtttaatctaattaatatattagttcgttagtctatttaaacttagatcgcattgcttatttaaagatgtt 29697486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 134 - 332
Target Start/End: Original strand, 43464417 - 43464612
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    ||||||||||||||||||||| ||| ||  |||||| ||| | || || ||||||||| ||||||||||||||| ||||||||||||  ||||||| | |    
T  43464417 cagtaatttaagcttattagtctacttt--tttttttcatatttatatctattattat-aactagaattgaaatttgatacaatatacggtcaaataccc 43464513  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgt 332  Q
    |||||  |||||| ||||||||||| | |||||||||||| || ||||||||||||  ||||||||||||||||||  |||||||||||||||| ||||    
T  43464514 taaaaattcatgttgattatcaaaagaaagtttaatctaattgatatattaattcgctagtctatttaaacttagatcacattgcttatttaaagatgt 43464612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 137 - 327
Target Start/End: Original strand, 11836820 - 11837010
Alignment:
Q  137 taatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaa 236  Q
    |||||||||||||||||| ||||||| ||||  |||| | ||||||||||||||| || |||||||||||||||||| ||||||| || |||||||||||    
T  11836820 taatttaagcttattagtttacattatttttccgcatatttaaatgtattattataaattagaattgaaatatgatataatatatagtaaaattctctaa 11836919  T
Q  237 aacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaa 327  Q
    ||| | ||||  | |||| ||| |||||||||| | | || |||||||  |||  ||||||||||| ||| ||  ||||| ||||||||||    
T  11836920 aacttgatgttaaatatcgaaagagagtttaatatcattgatatattagctcgctagtctatttaacctttgatcacattacttatttaaa 11837010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 177 - 327
Target Start/End: Original strand, 45613148 - 45613298
Alignment:
Q  177 taaatgtattattatgaactagaattgaaatatgatacaa-tatattgtcaaattctctaaaacctcatgtcgattatcaaaatagagtttaatctaact 275  Q
    |||||| |||||||| |||||||||||||||||||||||| ||||| ||||| |||| |||||  ||| || ||||||||||| |||||||||||||| |    
T  45613148 taaatgcattattataaactagaattgaaatatgatacaaatatatagtcaa-ttctgtaaaaattcacgttgattatcaaaagagagtttaatctaatt 45613246  T
Q  276 ggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaa 327  Q
    | || |||| ||||| |||||| ||||||| |||| |||||| |||||||||    
T  45613247 gatacattagttcgttagtctagttaaactaagaccacattgtttatttaaa 45613298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 52426499 - 52426396
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctct 234  Q
    |||||||||||||||||||| || |||| ||||| |||| | ||||||||||||||| || |||||||||||||||||| |||||||||| || ||||||    
T  52426499 agtaatttaagcttattagtttatattattttttcgcatatttaaatgtattattataaattagaattgaaatatgatataatatattgtaaagttctct 52426400  T
Q  235 aaaa 238  Q
    ||||    
T  52426399 aaaa 52426396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 135 - 213
Target Start/End: Original strand, 33458533 - 33458611
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgata 213  Q
    ||||||||| ||||||||||||| |||||||| | |||| | ||||||||||||||| ||||||||||||||| |||||    
T  33458533 agtaatttatgcttattagtatatattaatttctcgcatatttaaatgtattattataaactagaattgaaatttgata 33458611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 135 - 333
Target Start/End: Complemental strand, 36159372 - 36159173
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctct 234  Q
    |||||||| || ||||| |  |||| || ||||| |||| | ||||||||||||||| || |||||||||||||||||| ||||||| || || || |||    
T  36159372 agtaatttcagtttatttgcttacaatattttttcgcatatttaaatgtattattataaattagaattgaaatatgatataatatatagtaaagttatct 36159273  T
Q  235 aaaacctcatgtcgatta-tcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||||| ||||||  | || | |||| |||||||||| ||| || |||||||  |||  || |||||||| ||| ||  | ||| ||||||||||||||||    
T  36159272 aaaacttcatgttaaatattgaaaaaagagtttaatataattgatatattagctcgctaggctatttaatcttggatcatattacttatttaaatatgtt 36159173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 134 - 221
Target Start/End: Original strand, 44045648 - 44045735
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatat 221  Q
    ||||||||||| ||||||||||  ||||||||||  |||| | |||||| |||||||| ||||| ||||||||||||||| |||||||    
T  44045648 cagtaatttaaacttattagtaagcattaattttccgcatatttaaatgaattattataaactataattgaaatatgatataatatat 44045735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 29719824 - 29719749
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatg 210  Q
    ||||||||||| ||||||| ||| ||||||||||| ||  | ||||||||||||||  ||||||||||||||||||    
T  29719824 agtaatttaagtttattagcatagattaattttttacacatttaaatgtattattacaaactagaattgaaatatg 29719749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 269
Target Start/End: Complemental strand, 44890856 - 44890725
Alignment:
Q  138 aatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaa 237  Q
    ||||||||||||||||| ||||||| ||||  |||| | ||||||||||||||| || ||||| |||||||| ||| ||||||   | || || ||||||    
T  44890856 aatttaagcttattagtttacattatttttgcgcatatttaaatgtattattataaattagaactgaaatataatataatatagattaaagttttctaaa 44890757  T
Q  238 acctcatgtcgattatcaaaatagagtttaat 269  Q
    || ||||||  | |||| ||| ||||||||||    
T  44890756 acttcatgttaaatatcgaaagagagtttaat 44890725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 36195583 - 36195486
Alignment:
Q  141 ttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaa 238  Q
    |||||||||||||  ||||| | ||||| | || | ||||| ||||||||| |||||||||||||||||  ||  | |||| ||||||||||||||||    
T  36195583 ttaagcttattagactacatcagtttttcgtatatttaaatttattattattaactagaattgaaatattttatcagatatagtcaaattctctaaaa 36195486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 307
Target Start/End: Original strand, 43946648 - 43946756
Alignment:
Q  199 aattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctat 298  Q
    ||||||||||| ||  ||||||| ||||||||||||||||  |||| |  | | ||||||| ||||||||| | | || | ||||| || ||||||||||    
T  43946648 aattgaaatattatgtaatatatagtcaaattctctaaaaattcatattaaatgtcaaaatggagtttaatgttattgatttattagtttgtcagtctat 43946747  T
Q  299 ttaaactta 307  Q
    |||||||||    
T  43946748 ttaaactta 43946756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 207
Target Start/End: Original strand, 55449269 - 55449341
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaat 207  Q
    |||||||||| ||||||| | |||||||||| ||| ||  | |||||||||||| || |||||||| ||||||    
T  55449269 agtaatttaaacttattactctacattaattattttcacatttaaatgtattatgataaactagaaatgaaat 55449341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 1e-50; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 136 - 333
Target Start/End: Complemental strand, 9730336 - 9730140
Alignment:
Q  136 gtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctcta 235  Q
    |||||||||| ||||||||||||||||||||||  ||| | ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  9730336 gtaatttaaggttattagtatacattaattttta-catatttaaatgtattattataaactagaattgaaatatgatacaatatatggtcaaattctcta 9730238  T
Q  236 aaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||| |||| || ||||||||||| |||||||||| ||| || | ||||| ||||  ||||||| |||| ||| || |||||||||||||||| |||||    
T  9730237 aaaactcaggttgattatcaaaagagagtttaatttaattgatctattagttcgctagtctatctaaatttataccacattgcttatttaaagatgtt 9730140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 134 - 333
Target Start/End: Complemental strand, 16055171 - 16054969
Alignment:
Q  134 cagtaatttaagcttattagtatacattaatttttt-gcatttataaatgtattat--tatgaactagaattgaaatatgatacaatatattgtcaaatt 230  Q
    |||||||||||||||||||||||||||||||||||| |||| | ||||||||||||  ||| ||||||||||||||| ||||||||||||| ||||||||    
T  16055171 cagtaatttaagcttattagtatacattaatttttttgcatatttaaatgtattatattataaactagaattgaaatctgatacaatatatagtcaaatt 16055072  T
Q  231 ctctaaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatat 330  Q
       ||||| ||||||| ||||||||||| |||||||||||||| || ||||||| ||||  ||||||||||||||||||  |||||| ||||| ||| ||    
T  16055071 tcttaaaaactcatgttgattatcaaaagagagtttaatctaattgatatattagttcgctagtctatttaaacttagattacattgtttattcaaagat 16054972  T
Q  331 gtt 333  Q
    |||    
T  16054971 gtt 16054969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 136 - 332
Target Start/End: Complemental strand, 5443142 - 5442948
Alignment:
Q  136 gtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctcta 235  Q
    ||||||||||||| |||||||||||||| ||||  ||| |||||||||||| |||| || |||||||||||||||||| ||||||| ||||||||| |||    
T  5443142 gtaatttaagcttgttagtatacattaacttttcacatatataaatgtattcttataaattagaattgaaatatgatataatatatagtcaaattcccta 5443043  T
Q  236 aaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgt 332  Q
    ||  |||| || ||||||||||| |||||||||||||| || | ||||| ||||| ||||||||||||||||||   ||||||||||||||||||||    
T  5443042 aa--ctcaagttgattatcaaaagagagtttaatctaattgatctattagttcgttagtctatttaaacttagatcgcattgcttatttaaatatgt 5442948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 137 - 327
Target Start/End: Original strand, 9716188 - 9716379
Alignment:
Q  137 taatttaagctt-attagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctcta 235  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||  |||||||| ||| ||||| |||    
T  9716188 taatttaagctttattagtatacattaattttttgcatatataaatgtattattataaactagaatagaaatatgacgcaatatatagtcgaattcccta 9716287  T
Q  236 aaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaa 327  Q
    ||||||  ||| ||||||||||| |||||||||||||| ||   ||||| ||||  |||| || ||||||||||  ||||||||||||||||    
T  9716288 aaaccttgtgttgattatcaaaagagagtttaatctaattgaactattagttcgctagtcaatgtaaacttagatcacattgcttatttaaa 9716379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 137 - 333
Target Start/End: Original strand, 4816608 - 4816805
Alignment:
Q  137 taatttaagctt-attagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctcta 235  Q
    |||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||| ||||||||| |||||||| |||| |||||  || ||||| |||    
T  4816608 taatttaagctttattagtatacattaagtttttgcatatataaatgtattattataaactagaatagaaatatggtacagtatataatcgaattcccta 4816707  T
Q  236 aaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||||||| |||  |||||||||| |||||||||| ||| ||   ||||| ||||   ||| |||||||||||||| ||||||||||||||||||||||    
T  4816708 aaacctcgtgttcattatcaaaagagagtttaatttaattgaactattagttcgctggtccatttaaacttagaccacattgcttatttaaatatgtt 4816805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 153 - 333
Target Start/End: Original strand, 38556413 - 38556593
Alignment:
Q  153 gtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgatta 252  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||| ||||||||||||||||||| ||| ||||| ||||||| || ||| |||||    
T  38556413 gtatacattaattttttgcatatataaatgtattattttaaactagaatagaaatatgatacaatatatagtcgaattccctaaaacttcgtgttgatta 38556512  T
Q  253 tcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    |||||| |||||||||||| | ||   | ||| |||| ||||| ||||||||||| |  ||||||||||||||||||||||    
T  38556513 tcaaaagagagtttaatctgattgaacttttagttcgccagtccatttaaacttatatcacattgcttatttaaatatgtt 38556593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 137 - 333
Target Start/End: Complemental strand, 5880437 - 5880238
Alignment:
Q  137 taatttaagctt-attagtatacattaatttttt---gcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattct 232  Q
    |||||||||||| |||||||||||||||||||||   |||| ||| ||||||||||||| ||||||||| || |||||||||||||||| ||| |||||     
T  5880437 taatttaagctttattagtatacattaatttttttttgcatatatcaatgtattattataaactagaatggatatatgatacaatatatagtcgaattcc 5880338  T
Q  233 ctaaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgt 332  Q
    |||||| ||| ||| ||||| ||||| |||||||||||||| |||  ||||| ||||  |||| |||||||||||||  |||||||||||||||| ||||    
T  5880337 ctaaaatctcttgttgattaccaaaagagagtttaatctaattgg-ctattagttcgctagtccatttaaacttagatcacattgcttatttaaagatgt 5880239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 139 - 327
Target Start/End: Complemental strand, 10057425 - 10057234
Alignment:
Q  139 atttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctct---a 235  Q
    |||||| ||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |  |   |    
T  10057425 atttaaacttattagtatacattaatttttcgcatatataaatgtattattataaactagaattgaaatatgatacaatatatagtcaaatcccgtaaaa 10057326  T
Q  236 aaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaa 327  Q
    |||   ||||| || |||||||| | | |||||||||| || | ||||||||||  |||||||||||||||| |  |||||| |||||||||    
T  10057325 aaataccatgttgactatcaaaagatattttaatctaattgatctattaattcgctagtctatttaaacttatatcacattgtttatttaaa 10057234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 135 - 333
Target Start/End: Complemental strand, 43898275 - 43898074
Alignment:
Q  135 agtaatttaagcttattagtatacattaatttttt-gcatttataaatgtattattatgaactagaattgaaatatgatacaatatatt--gtcaaattc 231  Q
    |||||||||| |||||||  ||||||||||||||| |||| | |||| |||||||||| || ||||||||||||||| ||||||||||   ||||| ||     
T  43898275 agtaatttaaacttattaaaatacattaatttttttgcatatttaaaagtattattattaaatagaattgaaatatggtacaatatatatagtcaacttt 43898176  T
Q  232 tctaaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatg 331  Q
    ||||||| | ||||| ||||||||||| |||||||||||||| || ||||||| || |  || |||||||||||||||  |||||| ||||||||| |||    
T  43898175 tctaaaaacacatgttgattatcaaaagagagtttaatctaattgatatattagtttgctagactatttaaacttagatcacattgtttatttaaagatg 43898076  T
Q  332 tt 333  Q
    ||    
T  43898075 tt 43898074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 137 - 273
Target Start/End: Complemental strand, 1845438 - 1845301
Alignment:
Q  137 taatttaagctt-attagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctcta 235  Q
    |||||||||||| |||||||||||||| ||| ||| || ||||||||||||||||| ||||||||| ||||||||||||||||||| ||| ||||  | |    
T  1845438 taatttaagctttattagtatacattattttgttgtatatataaatgtattattataaactagaatagaaatatgatacaatatatagtcgaatttccca 1845339  T
Q  236 aaacctcatgtcgattatcaaaatagagtttaatctaa 273  Q
    ||||||| ||| ||||||||||| ||||||||||||||    
T  1845338 aaacctcgtgttgattatcaaaagagagtttaatctaa 1845301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 134 - 333
Target Start/End: Complemental strand, 13560154 - 13559956
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    |||||||||||  ||||||||||||||||||||||||||  | ||||||||||||||| || | |||||||||||| ||| | ||||| ||| ||||| |    
T  13560154 cagtaatttaattttattagtatacattaattttttgcacatttaaatgtattattataaatttgaattgaaatataatatagtatatagtcgaattccc 13560055  T
Q  234 taaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||||| || |||| ||||||||||| |||| |||||||||  | |||||| ||| |  ||||||||||||||||||   |||||||| |||||| |||||    
T  13560054 taaaaactgatgttgattatcaaaagagagattaatctaatcgatatattgatt-gctagtctatttaaacttagattgcattgcttgtttaaaaatgtt 13559956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 135 - 333
Target Start/End: Original strand, 5712455 - 5712653
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctct 234  Q
    |||||||||||||||||||| ||||||| |||||  ||| | ||||||||||||||| || |||||||||||| |||||  |||||| || || ||||||    
T  5712455 agtaatttaagcttattagtttacattattttttcacatatttaaatgtattattataaattagaattgaaatgtgatatgatatatagtaaagttctct 5712554  T
Q  235 aaaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||||| ||||||  | |||||||| |||||||||| | | || | |||||| | |  ||||||||||| ||||||  ||||| ||||||||||||||||    
T  5712555 aaaacttcatgttaaatatcaaaagagagtttaatatcattgatctattaacttgctagtctatttaaccttagatcacattacttatttaaatatgtt 5712653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 137 - 333
Target Start/End: Complemental strand, 16735251 - 16735056
Alignment:
Q  137 taatttaagctt-attagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctcta 235  Q
    |||||||||||| |||||||  ||||||||||||||||  |||||||||||||||| ||||||||| ||||||||||||||||||| ||| ||||  |||    
T  16735251 taatttaagctttattagta--cattaattttttgcatgcataaatgtattattataaactagaatagaaatatgatacaatatatagtcgaatttccta 16735154  T
Q  236 aaacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||||||| ||| ||||||| ||| |||||||| | ||| ||   ||||| ||||  |||| ||||||||||| |  ||||| |||||||||| |||||    
T  16735153 aaacctcgtgttgattatcgaaagagagtttagtttaattgaactattagttcgctagtccatttaaacttacatcacattacttatttaaagatgtt 16735056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 39848433 - 39848535
Alignment:
Q  137 taatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaa 236  Q
    |||||||| ||||||||| ||||||| |||||||||| |  |||||||||||||| || |||||||||||||||||| |||||||||| || ||||||||    
T  39848433 taatttaaacttattagtttacattatttttttgcatattaaaatgtattattataaattagaattgaaatatgatataatatattgtaaagttctctaa 39848532  T
Q  237 aac 239  Q
    |||    
T  39848533 aac 39848535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 7599134 - 7599035
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    ||||||||||||| |||||||||    || |||||||||| | ||| ||||||||||| ||||| ||||||||||||||| ||||||| |||||||||||    
T  7599134 cagtaatttaagcctattagtat----tatttttttgcatatttaagtgtattattataaactataattgaaatatgatataatatatagtcaaattctc 7599039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 12848673 - 12848750
Alignment:
Q  139 atttaagcttattagtatacattaattttttg-catttataaatgtattattatgaactagaattgaaatatgataca 215  Q
    ||||||||||||||||||||||| |||||||  ||| | ||| ||||||||||||||||||| |||||||||||||||    
T  12848673 atttaagcttattagtatacattgatttttttacatatttaattgtattattatgaactagacttgaaatatgataca 12848750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 333
Target Start/End: Complemental strand, 32700799 - 32700615
Alignment:
Q  149 attagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcg 248  Q
    |||||| ||||||| ||| | |||| | ||| ||||||||||| || |||||||||||||||| | ||||||| || || ||||||||||| ||||||      
T  32700799 attagtttacattattttatcgcatatttaagtgtattattataaattagaattgaaatatgaaataatatatagtaaagttctctaaaacttcatgtta 32700700  T
Q  249 attatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    | |||| ||| |||||||||| | | || | ||||| ||||  ||||||||||| |||  |  ||||| |||||||||| |||||    
T  32700699 aatatcgaaagagagtttaatatcattgatttattagttcgctagtctatttaaccttgaatcacattacttatttaaagatgtt 32700615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 16202012 - 16202117
Alignment:
Q  137 taatttaagcttattagtatacattaatttttt---gcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    |||||||| ||||||||| ||||||| ||||||   |||| | ||||||||||||||| || |||||||||||||||||| |||||||  | || |||||    
T  16202012 taatttaaacttattagtttacattatttttttttcgcatatttaaatgtattattataaattagaattgaaatatgatataatatatattaaagttctc 16202111  T
Q  234 taaaac 239  Q
    ||||||    
T  16202112 taaaac 16202117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 27023539 - 27023472
Alignment:
Q  146 cttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgata 213  Q
    ||||||||| ||||||| |||||||||| | || |||||||||||| ||||| |||||||||||||||    
T  27023539 cttattagtctacattacttttttgcatatttatatgtattattataaactacaattgaaatatgata 27023472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 237
Target Start/End: Complemental strand, 1706869 - 1706769
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctct 234  Q
    |||| |||||||||||||| ||||||||||||||| ||| | ||||| ||||||| | |||||||||| ||||||| ||  |||||  ||||||||||||    
T  1706869 agtactttaagcttattagcatacattaatttttt-catatttaaatttattattttaaactagaattcaaatatg-tattatatacagtcaaattctct 1706772  T
Q  235 aaa 237  Q
    |||    
T  1706771 aaa 1706769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 26714041 - 26714116
Alignment:
Q  137 taatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgata 213  Q
    ||||||||| |||||||| ||||||| ||||||  || | ||||| ||||||| | |||||||||||||||||||||    
T  26714041 taatttaagtttattagtctacattattttttta-atatttaaatatattattgttaactagaattgaaatatgata 26714116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 212
Target Start/End: Original strand, 44239613 - 44239693
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattt--tttgcatttataaatgtattattatgaactagaattgaaatatgat 212  Q
    |||||||||| | |||||| || ||||||||||  ||||||| | ||| ||||||||||| ||||| |||| |||||||||    
T  44239613 cagtaatttatgtttattaatacacattaatttgttttgcatatctaagtgtattattataaactataattaaaatatgat 44239693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 271
Target Start/End: Original strand, 12677727 - 12677837
Alignment:
Q  164 ttttttgcatttataaatgtattattatga---actagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaata 260  Q
    |||||||||| | ||||||||||||||| |   | ||||| |||||||||||| | |||||  ||||||||| |||||  ||||||  | |||||||| |    
T  12677727 ttttttgcatatttaaatgtattattattatatagtagaactgaaatatgatatattatataatcaaattctttaaaaattcatgttaaatatcaaaaaa 12677826  T
Q  261 gagtttaatct 271  Q
     ||||||||||    
T  12677827 aagtttaatct 12677837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 333
Target Start/End: Complemental strand, 29037840 - 29037697
Alignment:
Q  185 ttattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaatagagtttaatctaactggtatatta 284  Q
    ||||||| ||||| |||||||||||     |||||||  |||||||||||||||  ||||||  | ||| |||||  |||||||||| | || | ||||     
T  29037840 ttattataaactataattgaaatat-----aatatatactcaaattctctaaaaattcatgttaaatattaaaatgaagtttaatctcaatgatctattt 29037746  T
Q  285 attcgtcagtctatttaaacttagacaacattgcttatttaaatatgtt 333  Q
    ||||  ||  ||||||||||||||||  |||| |||||||||| |||||    
T  29037745 attccacatgctatttaaacttagaccgcattacttatttaaagatgtt 29037697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 134 - 333
Target Start/End: Original strand, 10876 - 11076
Alignment:
Q  134 cagtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctc 233  Q
    |||||||||||| |||||||||| ||||||||||| |||| | ||||||||||||| | ||||| ||||| ||| ||||| ||||||| ||||||||  |    
T  10876 cagtaatttaagtttattagtattcattaattttt-gcatatttaaatgtattattctaaactataattggaatgtgatataatatatagtcaaatttcc 10974  T
Q  234 taaaacctcatgtcgattatcaaaataga--gtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaatatg 331  Q
    ||| | ||||||| ||||||||||| |||  ||||||| ||| |  ||||||| || |  ||||||||||||||||||  | |||||||||||||| |||    
T  10975 taataactcatgttgattatcaaaagagatcgtttaatataatttatatattagtttgatagtctatttaaacttagatcatattgcttatttaaagatg 11074  T
Q  332 tt 333  Q
    ||    
T  11075 tt 11076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0373 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 246
Target Start/End: Complemental strand, 7474 - 7364
Alignment:
Q  135 agtaatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctct 234  Q
    |||||||||||||||||||| ||||||| ||||| |||| | ||||||||||||||| || |||||||||||||||||| ||||||| || || ||||||    
T  7474 agtaatttaagcttattagtttacatta-tttttcgcatatttaaatgtattattataaattagaattgaaatatgatataatatatagtaaacttctct 7376  T
Q  235 aaaacctcatgt 246  Q
    ||||| ||||||    
T  7375 aaaacttcatgt 7364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 167 - 309
Target Start/End: Original strand, 52975 - 53117
Alignment:
Q  167 tttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaaaacctcatgtcgattatcaaaatagagttt 266  Q
    ||||||| | |||||||| |||||| || |||||||||||||||||||||||| | ||||||||  |||||| ||  ||| ||||||||||| |||||||    
T  52975 tttgcatatttaaatgtaatattataaattagaattgaaatatgatacaatatgtagtcaaatttcctaaaaacttctgttgattatcaaaagagagttt 53074  T
Q  267 aatctaactggtatattaattcgtcagtctatttaaacttaga 309  Q
    ||| |||  | ||||||| ||||| | ||||||||||||||||    
T  53075 aatttaatcgatatattagttcgttaatctatttaaacttaga 53117  T

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Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 137 - 327
Target Start/End: Original strand, 324844 - 325034
Alignment:
Q  137 taatttaagcttattagtatacattaattttttgcatttataaatgtattattatgaactagaattgaaatatgatacaatatattgtcaaattctctaa 236  Q
    |||||||||||||||||| | ||||| |||||   || | ||||||||||| ||| ||  |||||||| |||||||  ||||||   | || ||||||||    
T  324844 taatttaagcttattagtttgcattattttttcatatatttaaatgtattactataaataagaattgagatatgatttaatatacaataaatttctctaa 324943  T
Q  237 aacctcatgtcgattatcaaaatagagtttaatctaactggtatattaattcgtcagtctatttaaacttagacaacattgcttatttaaa 327  Q
    ||| ||||||  | |||| ||| || ||||||| | | || | ||||||||||| |||||||||||  |||||  ||||| ||||||||||    
T  324944 aacttcatgttaaatatcgaaagagggtttaatatcattgatttattaattcgttagtctatttaacattagatcacattacttatttaaa 325034  T

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