View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16555_low_17 (Length: 319)
Name: NF16555_low_17
Description: NF16555
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16555_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 61 - 304
Target Start/End: Original strand, 22756212 - 22756455
Alignment:
| Q |
61 |
taccttacatcctattaattaacatgaaaatatatccattagaaactcacccttttagaaagaaagcattaatacaccttacactaaattttgtaatgaa |
160 |
Q |
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| T |
22756212 |
taccttacatcctattaattaacatgaaaatatatccattagaaactcacccttttagaaagaaagcattaatacaccttacactaaattttctaatgaa |
22756311 |
T |
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| Q |
161 |
atgaaatagtaaacaaacagtatctggtttgagtagaggacagagacacatagttgtgacacaacactaagaataaaatattgaaaaacaaaagaaggaa |
260 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
22756312 |
atgaaatagtaaacaaacagtatctggtttgagtagaggacagaaacacatagttgtgacacaacactaagaataaaatattgtaaaacaaaagaaggaa |
22756411 |
T |
|
| Q |
261 |
gaagacatagtcttttgtattataaaatggacacaaaccaaaga |
304 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22756412 |
gaagacatagtcttttgtattataaaatggacacaaaccaaaga |
22756455 |
T |
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