View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16559_high_1 (Length: 476)

Name: NF16559_high_1
Description: NF16559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16559_high_1
NF16559_high_1
[»] chr4 (37 HSPs)
chr4 (29-311)||(28693741-28694029)
chr4 (333-465)||(28694026-28694158)
chr4 (234-321)||(50384134-50384221)
chr4 (210-295)||(25818378-25818463)
chr4 (219-336)||(23444283-23444408)
chr4 (219-290)||(42375063-42375134)
chr4 (219-338)||(51265442-51265569)
chr4 (234-338)||(6271699-6271811)
chr4 (219-290)||(47661895-47661966)
chr4 (236-309)||(45591441-45591514)
chr4 (234-290)||(47404614-47404670)
chr4 (234-290)||(55090025-55090081)
chr4 (234-282)||(52028610-52028658)
chr4 (234-297)||(24006099-24006162)
chr4 (207-282)||(47762669-47762744)
chr4 (234-276)||(26186045-26186087)
chr4 (237-282)||(40789240-40789285)
chr4 (222-294)||(35682215-35682287)
chr4 (287-342)||(5048890-5048945)
chr4 (219-282)||(53954671-53954734)
chr4 (286-343)||(3862635-3862692)
chr4 (286-343)||(3871392-3871449)
chr4 (219-259)||(5048884-5048924)
chr4 (234-282)||(31430490-31430538)
chr4 (287-339)||(42375100-42375152)
chr4 (234-280)||(31532718-31532764)
chr4 (217-267)||(47661854-47661904)
chr4 (287-336)||(23444268-23444317)
chr4 (234-267)||(40789208-40789241)
chr4 (234-267)||(55090072-55090105)
chr4 (219-267)||(3862622-3862670)
chr4 (219-267)||(3871379-3871427)
chr4 (219-267)||(23444345-23444393)
chr4 (287-339)||(30709990-30710042)
chr4 (254-290)||(30861823-30861859)
chr4 (219-267)||(51265459-51265507)
chr4 (287-339)||(51265535-51265587)
[»] chr5 (33 HSPs)
chr5 (219-309)||(2953224-2953314)
chr5 (219-327)||(291105-291221)
chr5 (219-327)||(30117842-30117958)
chr5 (223-338)||(19655155-19655278)
chr5 (219-295)||(2093951-2094027)
chr5 (219-290)||(3899892-3899963)
chr5 (219-290)||(16971197-16971268)
chr5 (219-290)||(29699420-29699491)
chr5 (234-290)||(3180089-3180145)
chr5 (234-290)||(16439191-16439247)
chr5 (219-278)||(12913868-12913927)
chr5 (234-280)||(28818980-28819026)
chr5 (287-327)||(12913893-12913933)
chr5 (243-338)||(19598329-19598431)
chr5 (219-288)||(26662454-26662524)
chr5 (219-288)||(26934049-26934119)
chr5 (222-259)||(7137748-7137785)
chr5 (237-290)||(38134405-38134458)
chr5 (287-339)||(291187-291239)
chr5 (287-339)||(2953280-2953332)
chr5 (210-270)||(7009401-7009461)
chr5 (219-267)||(19655172-19655220)
chr5 (222-261)||(13312281-13312320)
chr5 (217-267)||(29699379-29699429)
chr5 (234-287)||(11983284-11983337)
chr5 (234-267)||(16439167-16439200)
chr5 (287-336)||(28819007-28819056)
chr5 (287-336)||(30117827-30117876)
chr5 (219-311)||(228383-228474)
chr5 (287-339)||(2093933-2093985)
chr5 (234-282)||(16802505-16802553)
chr5 (287-339)||(16971234-16971286)
chr5 (287-339)||(29699457-29699509)
[»] chr7 (28 HSPs)
chr7 (219-338)||(11016866-11016993)
chr7 (219-338)||(4290542-4290669)
chr7 (234-338)||(34854724-34854836)
chr7 (222-338)||(38975802-38975926)
chr7 (234-338)||(41018257-41018369)
chr7 (219-290)||(42628348-42628419)
chr7 (219-280)||(48000708-48000769)
chr7 (219-282)||(48000798-48000861)
chr7 (224-282)||(15027603-15027661)
chr7 (234-278)||(4649387-4649431)
chr7 (219-267)||(34854771-34854819)
chr7 (287-339)||(42628385-42628437)
chr7 (235-282)||(27028823-27028870)
chr7 (262-338)||(45231907-45231991)
chr7 (217-267)||(27028869-27028919)
chr7 (286-343)||(48000826-48000883)
chr7 (234-282)||(7671940-7671988)
chr7 (234-282)||(29053343-29053391)
chr7 (287-342)||(41945945-41946000)
chr7 (209-267)||(22764776-22764834)
chr7 (286-343)||(38975894-38975951)
chr7 (237-274)||(41945924-41945961)
chr7 (287-339)||(4290635-4290687)
chr7 (219-267)||(11016883-11016931)
chr7 (287-339)||(11016959-11017011)
chr7 (223-267)||(27028746-27028790)
chr7 (219-267)||(38975819-38975867)
chr7 (286-338)||(48000691-48000743)
[»] chr3 (31 HSPs)
chr3 (234-342)||(33689169-33689285)
chr3 (241-325)||(34060203-34060287)
chr3 (219-336)||(47492061-47492186)
chr3 (234-338)||(51046102-51046214)
chr3 (223-338)||(41752961-41753084)
chr3 (237-295)||(49418723-49418781)
chr3 (234-336)||(43139738-43139848)
chr3 (237-327)||(55223240-55223338)
chr3 (234-290)||(30476503-30476559)
chr3 (222-339)||(30734419-30734544)
chr3 (219-282)||(1801460-1801523)
chr3 (237-282)||(29031746-29031791)
chr3 (234-339)||(18321647-18321760)
chr3 (234-290)||(50550028-50550084)
chr3 (216-290)||(30904297-30904371)
chr3 (286-343)||(1801438-1801495)
chr3 (219-276)||(45103123-45103180)
chr3 (219-267)||(33689190-33689238)
chr3 (287-339)||(45103105-45103157)
chr3 (219-327)||(30580770-30580886)
chr3 (287-342)||(50524792-50524847)
chr3 (286-343)||(41753053-41753110)
chr3 (245-282)||(47677295-47677332)
chr3 (219-267)||(18321665-18321713)
chr3 (219-267)||(41752978-41753026)
chr3 (287-342)||(30580749-30580804)
chr3 (223-282)||(50524763-50524822)
chr3 (234-276)||(21024123-21024165)
chr3 (234-267)||(30476550-30476583)
chr3 (234-267)||(47677331-47677364)
chr3 (219-267)||(30580832-30580880)
[»] scaffold0180 (2 HSPs)
scaffold0180 (219-309)||(19136-19226)
scaffold0180 (287-327)||(19130-19170)
[»] chr8 (23 HSPs)
chr8 (219-338)||(10086754-10086881)
chr8 (219-338)||(35440983-35441110)
chr8 (219-338)||(5033158-5033285)
chr8 (234-338)||(8243417-8243529)
chr8 (219-338)||(33841605-33841732)
chr8 (234-290)||(34229694-34229750)
chr8 (224-339)||(5667093-5667216)
chr8 (234-342)||(8796415-8796531)
chr8 (234-309)||(31159885-31159960)
chr8 (234-294)||(6296654-6296714)
chr8 (234-290)||(34541832-34541888)
chr8 (234-280)||(35031643-35031689)
chr8 (219-267)||(10086771-10086819)
chr8 (219-266)||(5667111-5667158)
chr8 (287-336)||(43844559-43844608)
chr8 (219-267)||(2581839-2581887)
chr8 (223-267)||(4958617-4958661)
chr8 (234-294)||(4958648-4958707)
chr8 (287-339)||(5033251-5033303)
chr8 (219-267)||(8243464-8243512)
chr8 (219-267)||(35441045-35441093)
chr8 (287-327)||(43844479-43844519)
chr8 (234-282)||(45191156-45191204)
[»] chr2 (29 HSPs)
chr2 (219-338)||(16514421-16514548)
chr2 (222-290)||(14229370-14229438)
chr2 (237-295)||(6721999-6722057)
chr2 (234-321)||(15011294-15011389)
chr2 (219-282)||(6217238-6217301)
chr2 (219-290)||(38933640-38933711)
chr2 (234-290)||(2828637-2828693)
chr2 (234-290)||(2894016-2894072)
chr2 (219-338)||(29508704-29508832)
chr2 (287-327)||(33018635-33018675)
chr2 (219-282)||(14470606-14470669)
chr2 (234-293)||(37961756-37961815)
chr2 (286-327)||(9173070-9173111)
chr2 (219-268)||(33018620-33018669)
chr2 (234-295)||(37762030-37762091)
chr2 (287-339)||(38933677-38933729)
chr2 (287-326)||(2143899-2143938)
chr2 (286-337)||(6217222-6217273)
chr2 (219-282)||(29925584-29925647)
chr2 (234-272)||(14464584-14464622)
chr2 (217-267)||(15011292-15011342)
chr2 (223-285)||(32545846-32545908)
chr2 (294-323)||(1945424-1945453)
chr2 (237-282)||(8534207-8534252)
chr2 (219-280)||(14892323-14892384)
chr2 (237-282)||(24115981-24116026)
chr2 (287-327)||(14229361-14229401)
chr2 (287-327)||(24116010-24116050)
chr2 (287-339)||(32545878-32545930)
[»] chr1 (37 HSPs)
chr1 (234-294)||(47303444-47303504)
chr1 (219-338)||(29179611-29179738)
chr1 (219-338)||(48993931-48994058)
chr1 (234-282)||(8337880-8337928)
chr1 (219-290)||(32540762-32540833)
chr1 (233-295)||(45728335-45728397)
chr1 (234-282)||(4609057-4609105)
chr1 (234-290)||(34062262-34062318)
chr1 (234-290)||(48604976-48605032)
chr1 (234-289)||(1819518-1819573)
chr1 (219-290)||(15220864-15220935)
chr1 (234-338)||(37155043-37155155)
chr1 (234-311)||(28928808-28928885)
chr1 (234-290)||(741531-741587)
chr1 (234-290)||(17127593-17127649)
chr1 (234-290)||(46333975-46334031)
chr1 (219-290)||(5995422-5995493)
chr1 (219-290)||(33219626-33219697)
chr1 (234-338)||(48498412-48498524)
chr1 (234-336)||(44706812-44706923)
chr1 (234-290)||(9157363-9157419)
chr1 (222-282)||(29371429-29371489)
chr1 (243-282)||(1091582-1091621)
chr1 (292-336)||(15220906-15220950)
chr1 (287-339)||(33219663-33219715)
chr1 (286-338)||(46931994-46932046)
chr1 (219-267)||(46932011-46932059)
chr1 (219-290)||(49444927-49444996)
chr1 (237-276)||(38674537-38674576)
chr1 (286-343)||(5995458-5995515)
chr1 (234-267)||(29371397-29371430)
chr1 (222-267)||(37155063-37155108)
chr1 (234-282)||(5694919-5694966)
chr1 (219-267)||(21630056-21630104)
chr1 (219-267)||(29179673-29179721)
chr1 (287-339)||(48993913-48993965)
chr1 (287-339)||(49444909-49444961)
[»] chr6 (13 HSPs)
chr6 (234-290)||(551194-551250)
chr6 (234-293)||(2315333-2315392)
chr6 (219-290)||(12343153-12343224)
chr6 (234-294)||(10521878-10521938)
chr6 (219-290)||(24618615-24618686)
chr6 (219-276)||(17750969-17751026)
chr6 (234-290)||(13043510-13043566)
chr6 (224-266)||(17750921-17750963)
chr6 (246-327)||(24587469-24587558)
chr6 (219-267)||(24587475-24587523)
chr6 (286-338)||(24975749-24975801)
chr6 (219-268)||(24975766-24975815)
chr6 (287-327)||(24618609-24618649)
[»] scaffold0016 (1 HSPs)
scaffold0016 (219-290)||(49717-49788)
[»] scaffold0481 (1 HSPs)
scaffold0481 (243-327)||(2925-3006)
[»] scaffold0161 (2 HSPs)
scaffold0161 (219-338)||(27234-27361)
scaffold0161 (287-338)||(27217-27268)
[»] scaffold1033 (1 HSPs)
scaffold1033 (233-290)||(2266-2323)
[»] scaffold1029 (1 HSPs)
scaffold1029 (233-290)||(2266-2323)
[»] scaffold0586 (3 HSPs)
scaffold0586 (219-290)||(7061-7132)
scaffold0586 (222-267)||(7123-7168)
scaffold0586 (287-327)||(7055-7095)
[»] scaffold0047 (1 HSPs)
scaffold0047 (234-282)||(63818-63866)


Alignment Details
Target: chr4 (Bit Score: 206; Significance: 1e-112; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 29 - 311
Target Start/End: Original strand, 28693741 - 28694029
Alignment:
Q  29 gttgcgatctttcctctcttaatttggttcagtttgttattgacatgttccaactgcatggagtaattgaatttgagataggaaggagcacatattggat 128  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28693741 gttgcgatctttcctctcttaatttggttcagtttattattgacatgttccaactgcatggagtaattgaatttgagataggaaggagcacatattggat 28693840  T
Q  129 tcaaattagctccatgtaagtaggaacaagtgagttagaatatggtagtttgttgatacctgaggtgatggtgcatgaggtggatatcacttgggtgaca 228  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||    
T  28693841 tcaaattagatccatgtaagtaggaacaagtgagttagaatatggtagtttgttgattcgtgaggtgatggtgcatgaggtggatagcacttgggtgaca 28693940  T
Q  229 ------ttgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcattatgattgaccaatatcaccaa 311  Q
          | || |||||||  |||||||||| ||||||||||||||||||||||||||||| || ||||||||||  ||||| |||||||    
T  28693941 taaagttggatgacattgaccaatcacaatatcacaatgtttgtgaaagagagagaaacacaaacattatgattcgccaatgtcaccaa 28694029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 333 - 465
Target Start/End: Original strand, 28694026 - 28694158
Alignment:
Q  333 ccaagtgttacatggtgctgtatgagataagattatgacatgtaccatgttgtaagatgaggtggtcgcctcgggtgaacttggatttggtccccttatg 432  Q
    ||||||| |||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28694026 ccaagtgctacaaggtgctgtctgaggtaagattatgacatgtaccatgttgtaagatgaggtggtcgcctcgggtgaacttggatttggtccccttatg 28694125  T
Q  433 aggctacatggcatattcttagtgagttttctt 465  Q
    |||||||||||||||||||||||||||||||||    
T  28694126 aggctacatggcatattcttagtgagttttctt 28694158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 50384134 - 50384221
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcattatgattgaccaatatcaccaatgtcacccaa 321  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||| ||| |||||||||||||||||    
T  50384134 gacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgattgacgaatgtcaccaatgtcacccaa 50384221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 210 - 295
Target Start/End: Original strand, 25818378 - 25818463
Alignment:
Q  210 ggatatcacttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcattatgat 295  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| || |||| ||||    
T  25818378 ggataacacttgggtgacattgatgacattggtcaatcacaatgtcacaatgattgtgaaagagagagaaacacaatcattgtgat 25818463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 219 - 336
Target Start/End: Original strand, 23444283 - 23444408
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaa--------gcattatgattgaccaatatcacca 310  Q
    |||||||||||||  |||||||  ||||||||||||||||||| |||||||||||||||||||| ||        ||||| |||||| ||||| ||||||    
T  23444283 ttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcacca 23444382  T
Q  311 atgtcacccaactctattttacccaa 336  Q
    ||||||||||||||||| | ||||||    
T  23444383 atgtcacccaactctatgtcacccaa 23444408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 219 - 290
Target Start/End: Complemental strand, 42375134 - 42375063
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    |||||||||||||  ||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||    
T  42375134 ttgggtgacattggtgacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcatt 42375063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 219 - 338
Target Start/End: Complemental strand, 51265569 - 51265442
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaa--------gcattatgattgaccaatatcacca 310  Q
    |||||||||||||  |||||||  |||||| |||||||||||| |||||||||||||||||||| ||        ||||| |||||| ||||| ||||||    
T  51265569 ttgggtgacattggtgacattgaccaatcataatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcacca 51265470  T
Q  311 atgtcacccaactctattttacccaagt 338  Q
    ||||||||||||||||| | ||||||||    
T  51265469 atgtcacccaactctatgtcacccaagt 51265442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 234 - 338
Target Start/End: Complemental strand, 6271811 - 6271699
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaa--------gcattatgattgaccaatatcaccaatgtcacccaactct 325  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||| ||        ||||| |||||| ||||| |||||||| ||||||||||||    
T  6271811 gacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcaccaatatcacccaactct 6271712  T
Q  326 attttacccaagt 338  Q
    || | ||||||||    
T  6271711 atgtcacccaagt 6271699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 219 - 290
Target Start/End: Complemental strand, 47661966 - 47661895
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    |||||||||||||  |||||||  ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  47661966 ttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcatt 47661895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 45591441 - 45591514
Alignment:
Q  236 cattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcattatgattgaccaatatcacc 309  Q
    |||| |||||||| |||||||||||| |||||||||||||||||||| || |||| |||||||||||| |||||    
T  45591441 cattcgtcaatcataatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgattgaccaatgtcacc 45591514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 234 - 290
Target Start/End: Original strand, 47404614 - 47404670
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||  |||||||    
T  47404614 gacattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacccaagcatt 47404670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 234 - 290
Target Start/End: Original strand, 55090025 - 55090081
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||    
T  55090025 gacattggtcaatcacaatgtcacaatgcttgtgaaagagagagagacacaagcatt 55090081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 52028658 - 52028610
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaaca 282  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  52028658 gacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaaca 52028610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 234 - 297
Target Start/End: Original strand, 24006099 - 24006162
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcattatgattg 297  Q
    |||||||| ||||||||||| ||||||| |||||||||||||||||||| || |||| ||||||    
T  24006099 gacattggccaatcacaatgacacaatgcttgtgaaagagagagaaacataaacattgtgattg 24006162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 207 - 282
Target Start/End: Complemental strand, 47762744 - 47762669
Alignment:
Q  207 ggtggatatcacttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaaca 282  Q
    |||||||| || |||| ||| ||||  |||||||||||| || |||||||||||| ||||||||||||||||||||    
T  47762744 ggtggatagcagttggatgatattggtgacattggtcaaccataatgtcacaatgcttgtgaaagagagagaaaca 47762669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 234 - 276
Target Start/End: Original strand, 26186045 - 26186087
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagaga 276  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  26186045 gacattggtcaatcacaatgtcacaatgcttgtgaaagagaga 26186087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 40789285 - 40789240
Alignment:
Q  237 attggtcaatcacaatgtcacaatgtttgtgaaagagagagaaaca 282  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  40789285 attggccaatcacaatgtcacaatgcttgtgaaagagagagaaaca 40789240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 294
Target Start/End: Complemental strand, 35682287 - 35682215
Alignment:
Q  222 ggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcattatga 294  Q
    ||||||||||  |||||||  | ||||||||||||||||| |||||||||| ||||||||| ||| |||||||    
T  35682287 ggtgacattggtgacattgaccgatcacaatgtcacaatgcttgtgaaagatagagaaacacaagtattatga 35682215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 342
Target Start/End: Original strand, 5048890 - 5048945
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctattttacccaagtgtta 342  Q
    ||||||||||||||||| ||| ||||||||||||||||||| | | ||||||||||    
T  5048890 cattatgattgaccaatgtcatcaatgtcacccaactctatgtcatccaagtgtta 5048945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 219 - 282
Target Start/End: Complemental strand, 53954734 - 53954671
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaaca 282  Q
    |||||||||||||  |||||||  |||| |||||||||||||| ||||||||||| ||||||||    
T  53954734 ttgggtgacattggtgacattgtccaattacaatgtcacaatgcttgtgaaagagtgagaaaca 53954671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 286 - 343
Target Start/End: Original strand, 3862635 - 3862692
Alignment:
Q  286 gcattatgattgaccaatatcaccaatgtcacccaactctattttacccaagtgttac 343  Q
    ||||| |||||| ||||| ||||||||||||||||||||||| | ||| |||||||||    
T  3862635 gcattgtgattggccaatgtcaccaatgtcacccaactctatgtcacctaagtgttac 3862692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 286 - 343
Target Start/End: Original strand, 3871392 - 3871449
Alignment:
Q  286 gcattatgattgaccaatatcaccaatgtcacccaactctattttacccaagtgttac 343  Q
    ||||| |||||| ||||| ||||||||||||||||||||||| | ||| |||||||||    
T  3871392 gcattgtgattggccaatgtcaccaatgtcacccaactctatgtcacctaagtgttac 3871449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 5048924 - 5048884
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaa 259  Q
    |||||||||||||| ||||||||||||||| ||||||||||    
T  5048924 ttgggtgacattgatgacattggtcaatcataatgtcacaa 5048884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 31430490 - 31430538
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaaca 282  Q
    |||||||  ||||||||||||||||||| || |||||||||||||||||    
T  31430490 gacattgaccaatcacaatgtcacaatgcttatgaaagagagagaaaca 31430538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 42375100 - 42375152
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctattttacccaagtg 339  Q
    |||| ||||||| |||| ||||||||||||||||||||||| | |||||||||    
T  42375100 cattgtgattgatcaatgtcaccaatgtcacccaactctatgtcacccaagtg 42375152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 280
Target Start/End: Original strand, 31532718 - 31532764
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaa 280  Q
    ||||||| ||||||||||||||||||| | ||| |||||||||||||    
T  31532718 gacattgttcaatcacaatgtcacaatatatgtaaaagagagagaaa 31532764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 267
Target Start/End: Original strand, 47661854 - 47661904
Alignment:
Q  217 acttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    |||||||||||||||  |||||||| ||||||||||| ||||||| |||||    
T  47661854 acttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 47661904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 336
Target Start/End: Complemental strand, 23444317 - 23444268
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctattttacccaa 336  Q
    |||| ||||||  |||| ||||||||||||||||||||||| ||||||||    
T  23444317 cattgtgattggtcaatgtcaccaatgtcacccaactctatgttacccaa 23444268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 267
Target Start/End: Original strand, 40789208 - 40789241
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    |||||||| |||||||||||||||||||||||||    
T  40789208 gacattggccaatcacaatgtcacaatgtttgtg 40789241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 267
Target Start/End: Complemental strand, 55090105 - 55090072
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    |||||||||||||||||||||||||||| |||||    
T  55090105 gacattggtcaatcacaatgtcacaatgcttgtg 55090072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 267
Target Start/End: Complemental strand, 3862670 - 3862622
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    |||||||||||||  |||||||| ||||||||||| ||||||| |||||    
T  3862670 ttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 3862622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 267
Target Start/End: Complemental strand, 3871427 - 3871379
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    |||||||||||||  |||||||| ||||||||||| ||||||| |||||    
T  3871427 ttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 3871379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 267
Target Start/End: Complemental strand, 23444393 - 23444345
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    |||||||||||||  |||||||| ||||||||||| ||||||| |||||    
T  23444393 ttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 23444345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 30709990 - 30710042
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctattttacccaagtg 339  Q
    |||| |||||| ||||| |||||||||||||| |||||||| | |||||||||    
T  30709990 cattgtgattggccaatgtcaccaatgtcacctaactctatgtcacccaagtg 30710042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 290
Target Start/End: Original strand, 30861823 - 30861859
Alignment:
Q  254 tcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    |||||||| |||||||||||||||||||| |||||||    
T  30861823 tcacaatgcttgtgaaagagagagaaacacaagcatt 30861859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 51265459 - 51265507
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    |||||||||||||  |||||||| ||||||||||| ||||||| |||||    
T  51265459 ttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 51265507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 51265535 - 51265587
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctattttacccaagtg 339  Q
    |||||||||||  |||| ||||||||||||||||||||||  | |||||||||    
T  51265535 cattatgattggtcaatgtcaccaatgtcacccaactctaagtcacccaagtg 51265587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 3e-27; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 219 - 309
Target Start/End: Complemental strand, 2953314 - 2953224
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcattatgattgaccaatatcacc 309  Q
    |||||||||||||  |||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||| |||||    
T  2953314 ttgggtgacattggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgattgaccaatgtcacc 2953224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 219 - 327
Target Start/End: Complemental strand, 291221 - 291105
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaa--------gcattatgattgaccaatatcacca 310  Q
    |||||||||||||  ||||||| ||||||||||||||||||||||||||||||||| ||||| | ||        ||||| |||||| ||||| ||||||    
T  291221 ttgggtgacattggtgacattgatcaatcacaatgtcacaatgtttgtgaaagagaaagaaatacaagcattgtggcattgtgattggccaatgtcacca 291122  T
Q  311 atgtcacccaactctat 327  Q
    |||||||||||||||||    
T  291121 atgtcacccaactctat 291105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 219 - 327
Target Start/End: Original strand, 30117842 - 30117958
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaa--------gcattatgattgaccaatatcacca 310  Q
    |||||||||||||  || ||||  |||||||||||||||||||||| ||||| ||||||||||| ||        |||||||||||||||||||||||||    
T  30117842 ttgggtgacattggtgatattgaccaatcacaatgtcacaatgtttatgaaaaagagagaaacacaagcattgtggcattatgattgaccaatatcacca 30117941  T
Q  311 atgtcacccaactctat 327  Q
    |||||| ||||||||||    
T  30117942 atgtcatccaactctat 30117958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 223 - 338
Target Start/End: Complemental strand, 19655278 - 19655155
Alignment:
Q  223 gtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaa--------gcattatgattgaccaatatcaccaatgt 314  Q
    |||||||||  |||||||  ||||||||||||||||||| |||||||||||||||||||| ||        ||||| |||||| ||||| ||||||||||    
T  19655278 gtgacattggtgacattgtccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcaccaatgt 19655179  T
Q  315 cacccaactctattttacccaagt 338  Q
    ||||||||||||| | ||||||||    
T  19655178 cacccaactctatgtcacccaagt 19655155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 219 - 295
Target Start/End: Original strand, 2093951 - 2094027
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcattatgat 295  Q
    |||||||| ||||  ||||||| ||||||||||||||| |||| |||||||||||||||||||| ||||||||||||    
T  2093951 ttgggtgatattggtgacattgatcaatcacaatgtcataatgcttgtgaaagagagagaaacacaagcattatgat 2094027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 219 - 290
Target Start/End: Complemental strand, 3899963 - 3899892
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    |||||||||||||  |||||||  ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  3899963 ttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcatt 3899892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 219 - 290
Target Start/End: Complemental strand, 16971268 - 16971197
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    |||||||||||||  |||||||  ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  16971268 ttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcatt 16971197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 219 - 290
Target Start/End: Complemental strand, 29699491 - 29699420
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    |||||||| ||||  |||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  29699491 ttgggtgatattggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcatt 29699420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 234 - 290
Target Start/End: Original strand, 3180089 - 3180145
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  3180089 gacattgatcaatcataatgtcacaatgtttgtgaaagagagagaaacacaagcatt 3180145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 234 - 290
Target Start/End: Complemental strand, 16439247 - 16439191
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||    
T  16439247 gacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcatt 16439191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 12913927 - 12913868
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagaga 278  Q
    |||||||||||||  || |||||||||||||||||||| |||| ||||||||||||||||    
T  12913927 ttgggtgacattggtgatattggtcaatcacaatgtcataatgcttgtgaaagagagaga 12913868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 234 - 280
Target Start/End: Complemental strand, 28819026 - 28818980
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaa 280  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||    
T  28819026 gacattggtcaatcataatgtcacaatgcttgtgaaagagagagaaa 28818980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 12913893 - 12913933
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctat 327  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  12913893 cattgtgattgaccaatatcaccaatgtcacccaactctat 12913933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 338
Target Start/End: Complemental strand, 19598431 - 19598329
Alignment:
Q  243 caatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcattatg--------attgaccaatatcaccaatgtcacccaactctattttaccc 334  Q
    |||||| ||||||| |||| |||||||||||||||||||| ||||||| ||        |||||||||| |||||||||| |||||||||||| | ||||    
T  19598431 caatcataatgtca-aatgcttgtgaaagagagagaaacacaagcattgtggtattgtgattgaccaatgtcaccaatgttacccaactctatgtcaccc 19598333  T
Q  335 aagt 338  Q
    ||||    
T  19598332 aagt 19598329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 26662524 - 26662454
Alignment:
Q  219 ttgggtgacattgacgacattggtcaa-tcacaatgtcacaatgtttgtgaaagagagagaaacaaaagca 288  Q
    |||||||| ||||  |||||||||||| |||||||||||||||  |||||||| ||||||||||| |||||    
T  26662524 ttgggtgatattggtgacattggtcaaatcacaatgtcacaatacttgtgaaaaagagagaaacacaagca 26662454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 26934119 - 26934049
Alignment:
Q  219 ttgggtgacattgacgacattggtcaa-tcacaatgtcacaatgtttgtgaaagagagagaaacaaaagca 288  Q
    |||||||| ||||  |||||||||||| |||||||||||||||  |||||||| ||||||||||| |||||    
T  26934119 ttgggtgatattggtgacattggtcaaatcacaatgtcacaatacttgtgaaaaagagagaaacacaagca 26934049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 7137785 - 7137748
Alignment:
Q  222 ggtgacattgacgacattggtcaatcacaatgtcacaa 259  Q
    |||||||||||||||||||||||| |||||||||||||    
T  7137785 ggtgacattgacgacattggtcaaccacaatgtcacaa 7137748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 237 - 290
Target Start/End: Original strand, 38134405 - 38134458
Alignment:
Q  237 attggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    ||||| ||||||||||||||||||| | |||||||||| ||||||| |||||||    
T  38134405 attggccaatcacaatgtcacaatgctagtgaaagagaaagaaacacaagcatt 38134458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 291187 - 291239
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctattttacccaagtg 339  Q
    |||| ||||||| |||| ||||||||||||||||||||||| | |||||||||    
T  291187 cattgtgattgatcaatgtcaccaatgtcacccaactctatatcacccaagtg 291239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 2953280 - 2953332
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctattttacccaagtg 339  Q
    |||| |||||| ||||| ||||||||||||||||||||||| | |||||||||    
T  2953280 cattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaagtg 2953332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 270
Target Start/End: Complemental strand, 7009461 - 7009401
Alignment:
Q  210 ggatatcacttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaa 270  Q
    ||||| ||||||| ||||||||  || |||||||||||||||| |||||||| ||||||||    
T  7009461 ggatagcacttggatgacattggtgatattggtcaatcacaatatcacaatgcttgtgaaa 7009401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 19655172 - 19655220
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    |||||||||||||  |||||||| ||||||||||| |||||||||||||    
T  19655172 ttgggtgacattggtgacattggccaatcacaatgccacaatgtttgtg 19655220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 261
Target Start/End: Original strand, 13312281 - 13312320
Alignment:
Q  222 ggtgacattgacgacattggtcaatcacaatgtcacaatg 261  Q
    ||||||||||| ||||||| ||||||||||||||||||||    
T  13312281 ggtgacattgatgacattgatcaatcacaatgtcacaatg 13312320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 267
Target Start/End: Original strand, 29699379 - 29699429
Alignment:
Q  217 acttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    |||||||||||||||  |||||||| ||||||||||| ||||||| |||||    
T  29699379 acttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 29699429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 11983284 - 11983337
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagc 287  Q
    ||||||||||||||| ||||||||||| |||| || ||||||||| | ||||||    
T  11983284 gacattggtcaatcaaaatgtcacaatctttgagagagagagagagataaaagc 11983337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 267
Target Start/End: Original strand, 16439167 - 16439200
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    |||||||||||||||||||||||||||| |||||    
T  16439167 gacattggtcaatcacaatgtcacaatgcttgtg 16439200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 336
Target Start/End: Original strand, 28819007 - 28819056
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctattttacccaa 336  Q
    ||||||||||||||||| |||||||| |||| ||||||||| | ||||||    
T  28819007 cattatgattgaccaatgtcaccaatatcactcaactctatgtcacccaa 28819056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 336
Target Start/End: Complemental strand, 30117876 - 30117827
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctattttacccaa 336  Q
    |||| ||||||  |||||||||||||||||||||||||||| | ||||||    
T  30117876 cattgtgattggtcaatatcaccaatgtcacccaactctatatcacccaa 30117827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 311
Target Start/End: Complemental strand, 228474 - 228383
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcattatgattgaccaatatcaccaa 311  Q
    |||||| | ||||| || ||| |||||||||||||||| |||| |||| ||||||||| ||||| ||  ||| ||| |||||||| |||||||    
T  228474 ttgggtaatattgatgagatttgtcaatcacaatgtcaaaatgcttgtaaaagagagaaaaacacaaatattgtga-tgaccaatgtcaccaa 228383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 339
Target Start/End: Complemental strand, 2093985 - 2093933
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctattttacccaagtg 339  Q
    |||| ||||||| |||| |||||||| |||||||||||||| | |||||||||    
T  2093985 cattgtgattgatcaatgtcaccaatatcacccaactctatgtcacccaagtg 2093933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 16802553 - 16802505
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaaca 282  Q
    |||||||  |||||| |||||||||||| |||| |||||||||||||||    
T  16802553 gacattgaccaatcagaatgtcacaatgcttgtaaaagagagagaaaca 16802505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 16971234 - 16971286
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctattttacccaagtg 339  Q
    |||| ||||||  |||| ||||||||||||||||||||||| | |||||||||    
T  16971234 cattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacccaagtg 16971286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 29699457 - 29699509
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctattttacccaagtg 339  Q
    |||| |||||| ||||| |||||||| |||||||||||||| | |||||||||    
T  29699457 cattgtgattggccaatgtcaccaatatcacccaactctatgtcacccaagtg 29699509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 8e-25; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 219 - 338
Target Start/End: Complemental strand, 11016993 - 11016866
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaa--------gcattatgattgaccaatatcacca 310  Q
    |||||||||||||  |||||||  |||||||||||||||||||||||||||||||||||||||| ||        ||||| |||||| ||||| ||||||    
T  11016993 ttgggtgacattggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcacca 11016894  T
Q  311 atgtcacccaactctattttacccaagt 338  Q
    ||||||||||||||||| | ||||||||    
T  11016893 atgtcacccaactctatgtcacccaagt 11016866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 219 - 338
Target Start/End: Complemental strand, 4290669 - 4290542
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaa--------gcattatgattgaccaatatcacca 310  Q
    |||||||||||||  |||||||| ||||||||||||||||||  ||||||||||||||||||||  |        ||||| |||||||||||||||||||    
T  4290669 ttgggtgacattggtgacattggccaatcacaatgtcacaattcttgtgaaagagagagaaacacgagcattgtggcattgtgattgaccaatatcacca 4290570  T
Q  311 atgtcacccaactctattttacccaagt 338  Q
    || |||||||||||||| | ||||||||    
T  4290569 atatcacccaactctatgtcacccaagt 4290542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 234 - 338
Target Start/End: Original strand, 34854724 - 34854836
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaa--------gcattatgattgaccaatatcaccaatgtcacccaactct 325  Q
    |||||||| ||||||||||| ||||||| |||||||||||| ||||||| ||        ||||| |||||||||||| |||||||||||||||||||||    
T  34854724 gacattggccaatcacaatgccacaatgcttgtgaaagagatagaaacacaaacattgtggcattgtgattgaccaatgtcaccaatgtcacccaactct 34854823  T
Q  326 attttacccaagt 338  Q
    || | ||||||||    
T  34854824 atgtcacccaagt 34854836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 222 - 338
Target Start/End: Complemental strand, 38975926 - 38975802
Alignment:
Q  222 ggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaa--------gcattatgattgaccaatatcaccaatg 313  Q
    ||||||||||  ||||||| ||||| | |||| ||||||| |||||||||||||||||||| ||        ||||| |||||||||||| | |||||||    
T  38975926 ggtgacattggtgacattgatcaattataatgccacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattgaccaatgttaccaatg 38975827  T
Q  314 tcacccaactctattttacccaagt 338  Q
    |||||||||||||| | ||||||||    
T  38975826 tcacccaactctatgtcacccaagt 38975802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 234 - 338
Target Start/End: Original strand, 41018257 - 41018369
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaa--------gcattatgattgaccaatatcaccaatgtcacccaactct 325  Q
    |||||||| ||||||||||||| ||||| |||||||||||||||||||| ||        ||||| ||||||  |||| |||||||||||||||||||||    
T  41018257 gacattggccaatcacaatgtcccaatgcttgtgaaagagagagaaacataagcattgtggcattgtgattggtcaatgtcaccaatgtcacccaactct 41018356  T
Q  326 attttacccaagt 338  Q
    || | ||||||||    
T  41018357 atgtcacccaagt 41018369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 219 - 290
Target Start/End: Complemental strand, 42628419 - 42628348
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    |||||||||||||  || ||||| ||||||||||||| ||||| |||||||||||||||||||| |||||||    
T  42628419 ttgggtgacattggtgatattggccaatcacaatgtcccaatgcttgtgaaagagagagaaacataagcatt 42628348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 280
Target Start/End: Original strand, 48000708 - 48000769
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaa 280  Q
    |||||||||||||  ||||||| |||||||||||| ||||||| ||||||||||||||||||    
T  48000708 ttgggtgacattggtgacattgatcaatcacaatgccacaatgcttgtgaaagagagagaaa 48000769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 282
Target Start/End: Complemental strand, 48000861 - 48000798
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaaca 282  Q
    |||||||||||||  |||||||  ||||||||||| |||||||| |||||||||||||||||||    
T  48000861 ttgggtgacattggtgacattgaccaatcacaatgccacaatgtctgtgaaagagagagaaaca 48000798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 15027661 - 15027603
Alignment:
Q  224 tgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaaca 282  Q
    ||||||||  |||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  15027661 tgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaaca 15027603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 278
Target Start/End: Complemental strand, 4649431 - 4649387
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagaga 278  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||    
T  4649431 gacattggtcaatcacaatgtcacgatgcttgtgaaagagagaga 4649387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 267
Target Start/End: Complemental strand, 34854819 - 34854771
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||    
T  34854819 ttgggtgacattggtgacattggtcaatcacaatgccacaatgtttgtg 34854771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 42628385 - 42628437
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctattttacccaagtg 339  Q
    |||| |||||| ||||||||||||||||||||||||||||| | |||||||||    
T  42628385 cattgtgattggccaatatcaccaatgtcacccaactctatgtcacccaagtg 42628437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 235 - 282
Target Start/End: Original strand, 27028823 - 27028870
Alignment:
Q  235 acattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaaca 282  Q
    ||||||| ||||||||||||||||||| || |||||||||||||||||    
T  27028823 acattggacaatcacaatgtcacaatgcttctgaaagagagagaaaca 27028870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 338
Target Start/End: Original strand, 45231907 - 45231991
Alignment:
Q  262 tttgtgaaagagagagaaacaaaagcattat--------gattgaccaatatcaccaatgtcacccaactctattttacccaagt 338  Q
    ||||||||||||||||||||||||||||| |        ||||| ||||| ||||||||||||||||||||||| | ||||||||    
T  45231907 tttgtgaaagagagagaaacaaaagcattgtaacattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaagt 45231991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 27028919 - 27028869
Alignment:
Q  217 acttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    ||||||||||  |||  ||||||||||||||||||||||||||||||||||    
T  27028919 acttgggtgatgttggtgacattggtcaatcacaatgtcacaatgtttgtg 27028869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 286 - 343
Target Start/End: Original strand, 48000826 - 48000883
Alignment:
Q  286 gcattatgattgaccaatatcaccaatgtcacccaactctattttacccaagtgttac 343  Q
    ||||| ||||||  |||| ||||||||||||||||||||||| | |||||||||||||    
T  48000826 gcattgtgattggtcaatgtcaccaatgtcacccaactctatgtgacccaagtgttac 48000883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 7671940 - 7671988
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaaca 282  Q
    |||||| | ||||||||||| ||||||| ||||||||||||||||||||    
T  7671940 gacattagccaatcacaatgccacaatgcttgtgaaagagagagaaaca 7671988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 29053343 - 29053391
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaaca 282  Q
    |||||||| ||||||||||| | ||||| ||||||||||||||||||||    
T  29053343 gacattggccaatcacaatgcctcaatgcttgtgaaagagagagaaaca 29053391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 342
Target Start/End: Original strand, 41945945 - 41946000
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctattttacccaagtgtta 342  Q
    |||| |||||||||||||| ||||||||||| ||||| ||| | ||||||||||||    
T  41945945 cattgtgattgaccaatattaccaatgtcactcaactttatgtcacccaagtgtta 41946000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 22764834 - 22764776
Alignment:
Q  209 tggatatcacttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    |||||| |||||  |||||||||  || ||||| |||||||||||||||||||||||||    
T  22764834 tggatagcacttatgtgacattggtgatattggccaatcacaatgtcacaatgtttgtg 22764776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 343
Target Start/End: Original strand, 38975894 - 38975951
Alignment:
Q  286 gcattatgattgaccaatatcaccaatgtcacccaactctattttacccaagtgttac 343  Q
    ||||||| ||||| |||| |||||||||||||| |||||||| | ||| |||||||||    
T  38975894 gcattataattgatcaatgtcaccaatgtcacctaactctatgtcacctaagtgttac 38975951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 41945961 - 41945924
Alignment:
Q  237 attggtcaatcacaatgtcacaatgtttgtgaaagaga 274  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  41945961 attggtcaatcacaatgttacaatgcttgtgaaagaga 41945924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 4290635 - 4290687
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctattttacccaagtg 339  Q
    |||| |||||| ||||| ||||||||||||||||||| ||| | |||||||||    
T  4290635 cattgtgattggccaatgtcaccaatgtcacccaactgtatgtcacccaagtg 4290687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 11016883 - 11016931
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    |||||||||||||  |||||||| ||||||||||| ||||||| |||||    
T  11016883 ttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 11016931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 11016959 - 11017011
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctattttacccaagtg 339  Q
    |||| ||||||  |||| ||||||||||||||||||||||| | |||||||||    
T  11016959 cattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacccaagtg 11017011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 267
Target Start/End: Original strand, 27028746 - 27028790
Alignment:
Q  223 gtgacattgacgacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    |||||||||  |||||||| ||||||||||||||||||| |||||    
T  27028746 gtgacattggtgacattggacaatcacaatgtcacaatgcttgtg 27028790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 38975819 - 38975867
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    |||||||||||||   ||||||||||||||||||| ||||||| |||||    
T  38975819 ttgggtgacattggtaacattggtcaatcacaatgccacaatgcttgtg 38975867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 338
Target Start/End: Complemental strand, 48000743 - 48000691
Alignment:
Q  286 gcattatgattgaccaatatcaccaatgtcacccaactctattttacccaagt 338  Q
    ||||| ||||||| |||| |||||||||||||||||||| || | ||||||||    
T  48000743 gcattgtgattgatcaatgtcaccaatgtcacccaactcaatgtcacccaagt 48000691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 5e-23; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 234 - 342
Target Start/End: Complemental strand, 33689285 - 33689169
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaag--------cattatgattgaccaatatcaccaatgtcacccaactct 325  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||| |||        |||| |||||||||||||||| |||||||||||||||||    
T  33689285 gacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattgaccaatatcatcaatgtcacccaactct 33689186  T
Q  326 attttacccaagtgtta 342  Q
    || | || |||||||||    
T  33689185 atgtcacacaagtgtta 33689169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 241 - 325
Target Start/End: Complemental strand, 34060287 - 34060203
Alignment:
Q  241 gtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcattatgattgaccaatatcaccaatgtcacccaactct 325  Q
    |||||||||||| |||||||  || ||||||||||| ||||| || |||||||||||||||||||||||||||||| ||||||||    
T  34060287 gtcaatcacaatatcacaatacttatgaaagagagaaaaacacaaacattatgattgaccaatatcaccaatgtcatccaactct 34060203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 219 - 336
Target Start/End: Original strand, 47492061 - 47492186
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaag--------cattatgattgaccaatatcacca 310  Q
    |||||||||||||  |||||||| ||||||||||||||||||| |||||||| ||||||||||| |||        |||| |||||| ||||||| ||||    
T  47492061 ttgggtgacattggtgacattggccaatcacaatgtcacaatgcttgtgaaaaagagagaaacacaagcattgtgacattgtgattggccaatatgacca 47492160  T
Q  311 atgtcacccaactctattttacccaa 336  Q
    ||||||||||||||||| | ||||||    
T  47492161 atgtcacccaactctatgtcacccaa 47492186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 234 - 338
Target Start/End: Original strand, 51046102 - 51046214
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatta--------tgattgaccaatatcaccaatgtcacccaactct 325  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||        |||||| ||||| |||||||||||| ||||||||    
T  51046102 gacattgatcaatcataatgtcacaatgtttgtgaaagagagagaaacacaagcattatggcattgtgattggccaatgtcaccaatgtcatccaactct 51046201  T
Q  326 attttacccaagt 338  Q
    || | ||||||||    
T  51046202 atgtcacccaagt 51046214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 223 - 338
Target Start/End: Complemental strand, 41753084 - 41752961
Alignment:
Q  223 gtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaa--------gcattatgattgaccaatatcaccaatgt 314  Q
    |||||||||  |||||||| ||||||||||| ||||||| |||||||||||| ||||||| ||        ||||| |||||| ||||| ||||||||||    
T  41753084 gtgacattggtgacattggccaatcacaatgccacaatgcttgtgaaagagaaagaaacacaaacattgtggcattgtgattggccaatgtcaccaatgt 41752985  T
Q  315 cacccaactctattttacccaagt 338  Q
    ||||||||||||| | ||||||||    
T  41752984 cacccaactctatgtcacccaagt 41752961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 295
Target Start/End: Original strand, 49418723 - 49418781
Alignment:
Q  237 attggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcattatgat 295  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||    
T  49418723 attggtcaatcacaatgtcataatatttgtgaaagagagagaaacacaagcattatgat 49418781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 234 - 336
Target Start/End: Original strand, 43139738 - 43139848
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcattatg--------attgaccaatatcaccaatgtcacccaactct 325  Q
    ||||| ||||||||||||||||| |||| |||||||||||||||||||| ||||||| ||        |||| ||||| |||||||||||||||||||||    
T  43139738 gacatcggtcaatcacaatgtcagaatgcttgtgaaagagagagaaacacaagcattgtggcattgttattggccaatgtcaccaatgtcacccaactct 43139837  T
Q  326 attttacccaa 336  Q
    || | ||||||    
T  43139838 atgtcacccaa 43139848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 237 - 327
Target Start/End: Complemental strand, 55223338 - 55223240
Alignment:
Q  237 attggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaag--------cattatgattgaccaatatcaccaatgtcacccaactctat 327  Q
    |||||||||||| |||||||||||| |||||||||||||||||||| |||         ||| ||||||||||||||||||||||||||| ||||||||    
T  55223338 attggtcaatcataatgtcacaatgcttgtgaaagagagagaaacataagtattctaatattgtgattgaccaatatcaccaatgtcacctaactctat 55223240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 234 - 290
Target Start/End: Original strand, 30476503 - 30476559
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  30476503 gacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcatt 30476559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 222 - 339
Target Start/End: Original strand, 30734419 - 30734544
Alignment:
Q  222 ggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaag--------cattatgattgaccaatatcaccaatg 313  Q
    ||||||||||| |||||||  | ||||||||||||||||| |||||||||| ||||||||| |||        |||| |||||| ||||| |||||||||    
T  30734419 ggtgacattgatgacattgaccgatcacaatgtcacaatgcttgtgaaagatagagaaacacaagtattatgacattgtgattggccaatgtcaccaatg 30734518  T
Q  314 tcacccaactctattttacccaagtg 339  Q
    ||||| |||||||| | |||||||||    
T  30734519 tcacctaactctatgtcacccaagtg 30734544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 219 - 282
Target Start/End: Original strand, 1801460 - 1801523
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaaca 282  Q
    |||||||||||||  |||||||| ||||||||||| ||||||| ||||||||||||||||||||    
T  1801460 ttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgaaagagagagaaaca 1801523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 282
Target Start/End: Original strand, 29031746 - 29031791
Alignment:
Q  237 attggtcaatcacaatgtcacaatgtttgtgaaagagagagaaaca 282  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  29031746 attggtcaatcacaatgtcacaatgcttgtgaaagagagagaaaca 29031791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 234 - 339
Target Start/End: Complemental strand, 18321760 - 18321647
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagc--------attatgattgaccaatatcaccaatgtcacccaactct 325  Q
    ||||||||||||||||||||||||||||  ||||||| ||||| ||||| || |        ||| |||||||||||| |||||||| ||||||||||||    
T  18321760 gacattggtcaatcacaatgtcacaatgcatgtgaaaaagagaaaaacacaaactttgtgacattgtgattgaccaatgtcaccaatatcacccaactct 18321661  T
Q  326 attttacccaagtg 339  Q
    || || ||||||||    
T  18321660 atgttgcccaagtg 18321647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 234 - 290
Target Start/End: Complemental strand, 50550084 - 50550028
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    ||||||| ||||||| ||||||| ||||||||||||||||||||||||| |||||||    
T  50550084 gacattgatcaatcataatgtcataatgtttgtgaaagagagagaaacacaagcatt 50550028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 216 - 290
Target Start/End: Complemental strand, 30904371 - 30904297
Alignment:
Q  216 cacttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    |||||||||||||| || ||||||  ||||||||||| ||||||| ||| | ||||||||||||||| |||||||    
T  30904371 cacttgggtgacatcgatgacattaatcaatcacaatatcacaatatttataaaagagagagaaacacaagcatt 30904297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 286 - 343
Target Start/End: Complemental strand, 1801495 - 1801438
Alignment:
Q  286 gcattatgattgaccaatatcaccaatgtcacccaactctattttacccaagtgttac 343  Q
    ||||| |||||| ||||| ||||||||||||||||||||||| | |||||||||||||    
T  1801495 gcattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaagtgttac 1801438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 276
Target Start/End: Original strand, 45103123 - 45103180
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagaga 276  Q
    |||||||||||||  || |||| |||||||||||||||||||| ||||||||||||||    
T  45103123 ttgggtgacattggtgatattgatcaatcacaatgtcacaatgcttgtgaaagagaga 45103180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 33689190 - 33689238
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    |||||||||||||| || ||||||||||||||||||||||||| |||||    
T  33689190 ttgggtgacattgatgatattggtcaatcacaatgtcacaatgcttgtg 33689238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 339
Target Start/End: Complemental strand, 45103157 - 45103105
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctattttacccaagtg 339  Q
    |||| ||||||| |||||||||||||||||||||||||||| | |||||||||    
T  45103157 cattgtgattgatcaatatcaccaatgtcacccaactctatgtcacccaagtg 45103105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 219 - 327
Target Start/End: Original strand, 30580770 - 30580886
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaag--------cattatgattgaccaatatcacca 310  Q
    |||||||||||||  || ||||  |||||| ||||||||||| ||||||||||||| ||||||| |||        |||| |||||||||||| |||| |    
T  30580770 ttgggtgacattggtgatattgaccaatcataatgtcacaatatttgtgaaagagatagaaacacaagcactgtgacattgtgattgaccaatgtcacaa 30580869  T
Q  311 atgtcacccaactctat 327  Q
    ||||||||||| |||||    
T  30580870 atgtcacccaattctat 30580886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 342
Target Start/End: Original strand, 50524792 - 50524847
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctattttacccaagtgtta 342  Q
    |||| |||||||| ||||||||||||||||| ||||||||| | ||||||||||||    
T  50524792 cattgtgattgactaatatcaccaatgtcactcaactctatgtcacccaagtgtta 50524847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 286 - 343
Target Start/End: Original strand, 41753053 - 41753110
Alignment:
Q  286 gcattatgattgaccaatatcaccaatgtcacccaactctattttacccaagtgttac 343  Q
    ||||| |||||| ||||| ||||||||||||| ||||||||| | |||||||||||||    
T  41753053 gcattgtgattggccaatgtcaccaatgtcactcaactctatgtcacccaagtgttac 41753110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 47677295 - 47677332
Alignment:
Q  245 atcacaatgtcacaatgtttgtgaaagagagagaaaca 282  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  47677295 atcacaatgtcacaatgcttgtgaaagagagagaaaca 47677332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 18321665 - 18321713
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    |||||||| ||||  |||||||||||||||||||||||||| |||||||    
T  18321665 ttgggtgatattggtgacattggtcaatcacaatgtcacaaagtttgtg 18321713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 41752978 - 41753026
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    |||||||||||||  |||||||| ||||||||||| |||||||||||||    
T  41752978 ttgggtgacattggtgacattggccaatcacaatgccacaatgtttgtg 41753026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 342
Target Start/End: Complemental strand, 30580804 - 30580749
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctattttacccaagtgtta 342  Q
    |||||||||||  |||||||||||||||||||||| ||||| | || |||||||||    
T  30580804 cattatgattggtcaatatcaccaatgtcacccaattctatgtcactcaagtgtta 30580749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 50524822 - 50524763
Alignment:
Q  223 gtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaaca 282  Q
    |||||||||  || ||| |||||||||||||| || ||| ||||||||||||||||||||    
T  50524822 gtgacattggtgatattagtcaatcacaatgttacgatgcttgtgaaagagagagaaaca 50524763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 276
Target Start/End: Original strand, 21024123 - 21024165
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagaga 276  Q
    |||||||||||| ||||||||||||||  ||||||||||||||    
T  21024123 gacattggtcaaacacaatgtcacaattcttgtgaaagagaga 21024165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 267
Target Start/End: Complemental strand, 30476583 - 30476550
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    |||||||||||||||||||||||||||| |||||    
T  30476583 gacattggtcaatcacaatgtcacaatgcttgtg 30476550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 267
Target Start/End: Complemental strand, 47677364 - 47677331
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    ||||||| ||||||||||||||||||||||||||    
T  47677364 gacattgatcaatcacaatgtcacaatgtttgtg 47677331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 267
Target Start/End: Complemental strand, 30580880 - 30580832
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    ||||||||||||   ||||||||||||||||||||||||| || |||||    
T  30580880 ttgggtgacatttgtgacattggtcaatcacaatgtcacagtgcttgtg 30580832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 219 - 309
Target Start/End: Original strand, 19136 - 19226
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcattatgattgaccaatatcacc 309  Q
    |||||||||||||| || |||| |||||||||||||||||||| ||||| |||| ||||||||| || |||||||||||| ||||||||||    
T  19136 ttgggtgacattgatgatattgatcaatcacaatgtcacaatgcttgtggaagaaagagaaacacaaacattatgattgatcaatatcacc 19226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 19170 - 19130
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctat 327  Q
    |||| ||||||| |||||||| |||||||||||||||||||    
T  19170 cattgtgattgatcaatatcatcaatgtcacccaactctat 19130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 219 - 338
Target Start/End: Complemental strand, 10086881 - 10086754
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatta--------tgattgaccaatatcacca 310  Q
    |||||||||||||  |||||||  |||||||||||||||||||||||||||||||||||||||| || |||||        |||||||||||| |||| |    
T  10086881 ttgggtgacattggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattatgacattgtgattgaccaatgtcacta 10086782  T
Q  311 atgtcacccaactctattttacccaagt 338  Q
    ||||||||||| ||||| | ||||||||    
T  10086781 atgtcacccaattctatgtcacccaagt 10086754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 219 - 338
Target Start/End: Original strand, 35440983 - 35441110
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaa--------gcattatgattgaccaatatcacca 310  Q
    |||||||||||||  |||||||  ||||||||||||||||||| |||||||||||||||||||| ||        ||||| |||||| ||||| ||||||    
T  35440983 ttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcacca 35441082  T
Q  311 atgtcacccaactctattttacccaagt 338  Q
    ||||||||||||||||| | ||||||||    
T  35441083 atgtcacccaactctatgtcacccaagt 35441110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 219 - 338
Target Start/End: Complemental strand, 5033285 - 5033158
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaa--------gcattatgattgaccaatatcacca 310  Q
    |||||||||||||  |||||||  ||||||||||||||||||| |||||||||||||||||||| ||        ||||| ||||||  |||| ||||||    
T  5033285 ttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacca 5033186  T
Q  311 atgtcacccaactctattttacccaagt 338  Q
    ||||||||||||||||| | ||||||||    
T  5033185 atgtcacccaactctatgtcacccaagt 5033158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 234 - 338
Target Start/End: Original strand, 8243417 - 8243529
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaa--------gcattatgattgaccaatatcaccaatgtcacccaactct 325  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||||||| ||        ||||| |||||||||||  |||||||||||||||||||||    
T  8243417 gacattgatcaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattgaccaacgtcaccaatgtcacccaactct 8243516  T
Q  326 attttacccaagt 338  Q
    || | ||||||||    
T  8243517 atgtcacccaagt 8243529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 219 - 338
Target Start/End: Original strand, 33841605 - 33841732
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaa--------gcattatgattgaccaatatcacca 310  Q
    |||||||||||||  |||||||  |||||||| |||||||||| |||||||||||||||||||| ||        ||||| ||||||  |||| ||||||    
T  33841605 ttgggtgacattggtgacattgaccaatcacattgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattctgattggtcaatgtcacca 33841704  T
Q  311 atgtcacccaactctattttacccaagt 338  Q
    ||||||||||||||||| | ||||||||    
T  33841705 atgtcacccaactctatgtcacccaagt 33841732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 234 - 290
Target Start/End: Complemental strand, 34229750 - 34229694
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||    
T  34229750 gacattggtcaatcacaatatcacaatgcttgtgaaagagagagaaacacaagcatt 34229694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 224 - 339
Target Start/End: Complemental strand, 5667216 - 5667093
Alignment:
Q  224 tgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaag--------cattatgattgaccaatatcaccaatgtc 315  Q
    ||||||||  |||||||| |||| ||||||||| |||| |||||||||||||||||| | |||        |||| |||||||||||| |||||||||||    
T  5667216 tgacattggtgacattggccaattacaatgtcataatgcttgtgaaagagagagaaatacaagcattgtgacattgtgattgaccaatgtcaccaatgtc 5667117  T
Q  316 acccaactctattttacccaagtg 339  Q
    | |||||||||| | |||||||||    
T  5667116 atccaactctatgtcacccaagtg 5667093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 234 - 342
Target Start/End: Complemental strand, 8796531 - 8796415
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaag--------cattatgattgaccaatatcaccaatgtcacccaactct 325  Q
    |||||||  |||||| |||||||||||| |||||||||| ||||||||| |||        |||| ||||||||||||||||| ||| ||||| ||||||    
T  8796531 gacattgaccaatcaaaatgtcacaatgcttgtgaaagatagagaaacacaagcattgtgacattgtgattgaccaatatcacaaatatcacctaactct 8796432  T
Q  326 attttacccaagtgtta 342  Q
    || | ||||||||||||    
T  8796431 atgtcacccaagtgtta 8796415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 234 - 309
Target Start/End: Complemental strand, 31159960 - 31159885
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcattatgattgaccaatatcacc 309  Q
    |||||| | |||||| |||||||||||| |||||||||||||||||||||||  ||| ||||||| |||| |||||    
T  31159960 gacattcgccaatcataatgtcacaatgcttgtgaaagagagagaaacaaaaatattgtgattgatcaatgtcacc 31159885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 6296714 - 6296654
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcattatga 294  Q
    |||||| |||||| | |||||||||||  |||||||||||||||||||| |||||||||||    
T  6296714 gacattagtcaattataatgtcacaatacttgtgaaagagagagaaacacaagcattatga 6296654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 290
Target Start/End: Original strand, 34541832 - 34541888
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    |||||||| |||||| ||| |||||||| |||||||||||||||||||| |||||||    
T  34541832 gacattggccaatcataatatcacaatgcttgtgaaagagagagaaacacaagcatt 34541888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 280
Target Start/End: Original strand, 35031643 - 35031689
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaa 280  Q
    ||||||| |||||||||||||| ||||| ||||||||||||||||||    
T  35031643 gacattgatcaatcacaatgtcgcaatgcttgtgaaagagagagaaa 35031689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 10086771 - 10086819
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    ||||||||||||   ||||||||||||||||||||||| ||||||||||    
T  10086771 ttgggtgacattagtgacattggtcaatcacaatgtcataatgtttgtg 10086819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 266
Target Start/End: Original strand, 5667111 - 5667158
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgt 266  Q
    |||| ||||||||  |||||||||||||||||||||||||||| ||||    
T  5667111 ttggatgacattggtgacattggtcaatcacaatgtcacaatgcttgt 5667158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 336
Target Start/End: Original strand, 43844559 - 43844608
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctattttacccaa 336  Q
    |||| ||||||| ||||||||||||||||| |||||||||| | ||||||    
T  43844559 cattgtgattgatcaatatcaccaatgtcatccaactctatgtcacccaa 43844608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 2581839 - 2581887
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    |||||||||||||  |||||||| ||||||||||| ||||||| |||||    
T  2581839 ttgggtgacattgttgacattggccaatcacaatgccacaatgcttgtg 2581887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 267
Target Start/End: Original strand, 4958617 - 4958661
Alignment:
Q  223 gtgacattgacgacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    |||| ||||| |||||||| |||||||||||||| ||||||||||    
T  4958617 gtgatattgatgacattggccaatcacaatgtcataatgtttgtg 4958661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 4958707 - 4958648
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcattatga 294  Q
    |||||||  ||||||||| ||||||||  |||||||||||||||||||| || ||||||||    
T  4958707 gacattgaccaatcacaa-gtcacaatacttgtgaaagagagagaaacacaaacattatga 4958648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 5033251 - 5033303
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctattttacccaagtg 339  Q
    |||| ||||||  |||| ||||||||||||||||||||||| | |||||||||    
T  5033251 cattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacccaagtg 5033303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 267
Target Start/End: Complemental strand, 8243512 - 8243464
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    |||||||||||||  ||| |||||||||||||||| ||||||| |||||    
T  8243512 ttgggtgacattggtgacgttggtcaatcacaatgccacaatgcttgtg 8243464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 267
Target Start/End: Complemental strand, 35441093 - 35441045
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    |||||||||||||  |||||||| ||||||||||| ||||||| |||||    
T  35441093 ttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 35441045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 43844519 - 43844479
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctat 327  Q
    |||||||||| |||||||||| |||| ||||||||||||||    
T  43844519 cattatgattaaccaatatcatcaatatcacccaactctat 43844479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 45191156 - 45191204
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaaca 282  Q
    ||||||| | |||||||||| ||||||| || |||||||||||||||||    
T  45191156 gacattgattaatcacaatgccacaatgcttatgaaagagagagaaaca 45191204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 2e-22; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 219 - 338
Target Start/End: Complemental strand, 16514548 - 16514421
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatta--------tgattgaccaatatcacca 310  Q
    |||||||| ||||  |||||||  ||||||||||||||||||| |||||||||||||||||||| ||||||||        |||||| ||||| ||||||    
T  16514548 ttgggtgagattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattatggcatagtgattggccaatgtcacca 16514449  T
Q  311 atgtcacccaactctattttacccaagt 338  Q
    ||||||||||||||||| | ||||||||    
T  16514448 atgtcacccaactctatgtcacccaagt 16514421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 222 - 290
Target Start/End: Original strand, 14229370 - 14229438
Alignment:
Q  222 ggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    ||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  14229370 ggtgacattggtgacattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcatt 14229438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 295
Target Start/End: Complemental strand, 6722057 - 6721999
Alignment:
Q  237 attggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcattatgat 295  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  6722057 attggccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaagcattgtgat 6721999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 234 - 321
Target Start/End: Complemental strand, 15011389 - 15011294
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaa--------gcattatgattgaccaatatcaccaatgtcacccaa 321  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||| ||        ||||| |||||| |||||||||||||||||||||||    
T  15011389 gacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatatcaccaatgtcacccaa 15011294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 219 - 282
Target Start/End: Original strand, 6217238 - 6217301
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaaca 282  Q
    |||||||||||||  |||||||| ||||||||||| ||||||| ||||||||||||||||||||    
T  6217238 ttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgaaagagagagaaaca 6217301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 219 - 290
Target Start/End: Complemental strand, 38933711 - 38933640
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    |||||||||||||  ||| |||| |||||| |||||||||||| |||||||||||||||||||| |||||||    
T  38933711 ttgggtgacattggtgacgttggccaatcataatgtcacaatgcttgtgaaagagagagaaacacaagcatt 38933640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 234 - 290
Target Start/End: Complemental strand, 2828693 - 2828637
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    |||||||| ||||||||||||||||||| || ||||||||||||||||| |||||||    
T  2828693 gacattggccaatcacaatgtcacaatgcttctgaaagagagagaaacacaagcatt 2828637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 234 - 290
Target Start/End: Complemental strand, 2894072 - 2894016
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||| | |||||||    
T  2894072 gacattggtcaatcacagtgtcacaatgcttgtgaaagagagagaaatacaagcatt 2894016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 338
Target Start/End: Original strand, 29508704 - 29508832
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaa-tgtcacaatgtttgtgaaagagagagaaacaaaa--------gcattatgattgaccaatatcacc 309  Q
    |||||||||||||  |||||||  ||||||||| || ||||||| |||||||||||||||||||| ||        ||||| |||||| ||||| |||||    
T  29508704 ttgggtgacattggtgacattgaccaatcacaaatgccacaatgcttgtgaaagagagagaaacacaagcattgcggcattgtgattggccaatgtcacc 29508803  T
Q  310 aatgtcacccaactctattttacccaagt 338  Q
    ||| |||||||||||||| | ||||||||    
T  29508804 aatatcacccaactctatgtcacccaagt 29508832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 33018635 - 33018675
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctat 327  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  33018635 cattgtgattgaccaatatcaccaatgtcacccaactctat 33018675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 219 - 282
Target Start/End: Original strand, 14470606 - 14470669
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaaca 282  Q
    |||||||||||||  |||||||  ||||||||||||  ||||| ||||||||||||||||||||    
T  14470606 ttgggtgacattggtgacattgaccaatcacaatgttgcaatgcttgtgaaagagagagaaaca 14470669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 37961815 - 37961756
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcattatg 293  Q
    |||||||  ||||||||||| ||||||| |||||||||||||||||||| || |||||||    
T  37961815 gacattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaaacattatg 37961756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 286 - 327
Target Start/End: Original strand, 9173070 - 9173111
Alignment:
Q  286 gcattatgattgaccaatatcaccaatgtcacccaactctat 327  Q
    ||||| |||||| |||||||||||||||||||||||||||||    
T  9173070 gcattgtgattggccaatatcaccaatgtcacccaactctat 9173111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 33018669 - 33018620
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtga 268  Q
    |||||||||||||  || ||||||||||||||||||||||||| ||||||    
T  33018669 ttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtga 33018620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 37762030 - 37762091
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcattatgat 295  Q
    |||||||  ||||||||||||| ||||| |||||||||||| ||||||| ||||||| ||||    
T  37762030 gacattgaccaatcacaatgtcgcaatgcttgtgaaagagaaagaaacacaagcattgtgat 37762091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 38933677 - 38933729
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctattttacccaagtg 339  Q
    ||||||||||| ||||  ||||||||||||||||||||||| | |||||||||    
T  38933677 cattatgattggccaacgtcaccaatgtcacccaactctatgtcacccaagtg 38933729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 326
Target Start/End: Complemental strand, 2143938 - 2143899
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactcta 326  Q
    ||||||||||||||||||||||| |||||||| |||||||    
T  2143938 cattatgattgaccaatatcaccgatgtcacctaactcta 2143899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 337
Target Start/End: Complemental strand, 6217273 - 6217222
Alignment:
Q  286 gcattatgattgaccaatatcaccaatgtcacccaactctattttacccaag 337  Q
    ||||| |||||| ||||| ||||||||||||||||||||||| | |||||||    
T  6217273 gcattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaag 6217222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 282
Target Start/End: Original strand, 29925584 - 29925647
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaaca 282  Q
    |||||||| ||||  |||||||| |  ||||||||||| |||| ||||||||||||||||||||    
T  29925584 ttgggtgatattggtgacattggcccctcacaatgtcagaatgcttgtgaaagagagagaaaca 29925647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 272
Target Start/End: Original strand, 14464584 - 14464622
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaaga 272  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  14464584 gacattggtcaatcacaatgtcacaatacttgtgaaaga 14464622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 267
Target Start/End: Original strand, 15011292 - 15011342
Alignment:
Q  217 acttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    |||||||||||||||  || ||||| ||||||||||| |||||||||||||    
T  15011292 acttgggtgacattggtgatattggccaatcacaatgccacaatgtttgtg 15011342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 32545908 - 32545846
Alignment:
Q  223 gtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaa 285  Q
    |||||||||  |||||||| |||||| |||||||||||| || ||||||||||| ||| ||||    
T  32545908 gtgacattggtgacattggccaatcataatgtcacaatgcttatgaaagagagataaaaaaaa 32545846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 323
Target Start/End: Complemental strand, 1945453 - 1945424
Alignment:
Q  294 attgaccaatatcaccaatgtcacccaact 323  Q
    ||||||||||||||||||||||||||||||    
T  1945453 attgaccaatatcaccaatgtcacccaact 1945424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 8534252 - 8534207
Alignment:
Q  237 attggtcaatcacaatgtcacaatgtttgtgaaagagagagaaaca 282  Q
    |||||||||| |||||||||||||  |||||||| |||||||||||    
T  8534252 attggtcaattacaatgtcacaattcttgtgaaatagagagaaaca 8534207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 280
Target Start/End: Complemental strand, 14892384 - 14892323
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaa 280  Q
    |||| ||||||||  ||||||| ||||||||||||| |||||  || |||||||||||||||    
T  14892384 ttggatgacattggtgacattgatcaatcacaatgttacaatacttatgaaagagagagaaa 14892323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 24116026 - 24115981
Alignment:
Q  237 attggtcaatcacaatgtcacaatgtttgtgaaagagagagaaaca 282  Q
    ||||||||||||||||||| ||||| ||||||||||| | ||||||    
T  24116026 attggtcaatcacaatgtcgcaatgcttgtgaaagagtgtgaaaca 24115981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 14229401 - 14229361
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctat 327  Q
    |||| |||||||||||| |||||||||||||| ||||||||    
T  14229401 cattgtgattgaccaatgtcaccaatgtcaccgaactctat 14229361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 24116010 - 24116050
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctat 327  Q
    |||| ||||||||||||||||| |||| |||||||||||||    
T  24116010 cattgtgattgaccaatatcactaatggcacccaactctat 24116050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 32545878 - 32545930
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctattttacccaagtg 339  Q
    ||||||||||| ||||| |||||||||||||  |||||||| | |||||||||    
T  32545878 cattatgattggccaatgtcaccaatgtcactaaactctatgtcacccaagtg 32545930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 3e-21; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 47303504 - 47303444
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcattatga 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  47303504 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattatga 47303444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 219 - 338
Target Start/End: Original strand, 29179611 - 29179738
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaa--------gcattatgattgaccaatatcacca 310  Q
    |||||||||||||  |||| ||  ||||||||||||||||||| |||||||||||||||||||| ||        ||||| |||||| ||||| ||||||    
T  29179611 ttgggtgacattggtgacactgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcacca 29179710  T
Q  311 atgtcacccaactctattttacccaagt 338  Q
    ||||||||||||||||| | ||||||||    
T  29179711 atgtcacccaactctatgtcacccaagt 29179738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 219 - 338
Target Start/End: Original strand, 48993931 - 48994058
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaa--------gcattatgattgaccaatatcacca 310  Q
    |||||||||||||  |||||||  ||||||||||||||||||| |||||||||||||||||||| ||        ||||| ||||||  |||| ||||||    
T  48993931 ttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacca 48994030  T
Q  311 atgtcacccaactctattttacccaagt 338  Q
    ||||||||||||||||| | ||||||||    
T  48994031 atgtcacccaactctatgtcacccaagt 48994058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 8337880 - 8337928
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaaca 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8337880 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaaca 8337928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 219 - 290
Target Start/End: Original strand, 32540762 - 32540833
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    |||||||||||||  | |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  32540762 ttgggtgacattggtggcattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcatt 32540833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 233 - 295
Target Start/End: Complemental strand, 45728397 - 45728335
Alignment:
Q  233 cgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcattatgat 295  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||| ||||    
T  45728397 cgacattggtcaatcacaatgtcataatgcttgtgaaagagagagaaacacaagcattgtgat 45728335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 4609105 - 4609057
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaaca 282  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4609105 gacattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaaca 4609057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 234 - 290
Target Start/End: Complemental strand, 34062318 - 34062262
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||| |||||||    
T  34062318 gacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacataagcatt 34062262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 234 - 290
Target Start/End: Original strand, 48604976 - 48605032
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||    
T  48604976 gacattggtcaatcacaatgtcacaatatttgtgaaagagagagaaacgcaagcatt 48605032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 234 - 289
Target Start/End: Original strand, 1819518 - 1819573
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcat 289  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||    
T  1819518 gacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 1819573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 219 - 290
Target Start/End: Complemental strand, 15220935 - 15220864
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    |||||||||||||  || ||||| |||||||||| |||||||| |||||||||||||||||||| |||||||    
T  15220935 ttgggtgacattggtgatattggccaatcacaatctcacaatgcttgtgaaagagagagaaacacaagcatt 15220864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 234 - 338
Target Start/End: Complemental strand, 37155155 - 37155043
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaag--------cattatgattgaccaatatcaccaatgtcacccaactct 325  Q
    |||||||| ||||||||||||||||||  |||||||||||||||||||| |||        |||| |||||| ||||| |||||||||||||| ||||||    
T  37155155 gacattggccaatcacaatgtcacaatacttgtgaaagagagagaaacacaagcattgtgacattgtgattggccaatgtcaccaatgtcaccaaactct 37155056  T
Q  326 attttacccaagt 338  Q
    || | ||||||||    
T  37155055 atgtcacccaagt 37155043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 234 - 311
Target Start/End: Original strand, 28928808 - 28928885
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcattatgattgaccaatatcaccaa 311  Q
    |||||||| |||||||||||||||| || |||||||||||||||||||| || || | |||||| ||||| |||||||    
T  28928808 gacattggccaatcacaatgtcacagtgcttgtgaaagagagagaaacacaaacactgtgattggccaatgtcaccaa 28928885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 234 - 290
Target Start/End: Original strand, 741531 - 741587
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    |||||||  ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  741531 gacattgcccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcatt 741587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 234 - 290
Target Start/End: Original strand, 17127593 - 17127649
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    |||||||  ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  17127593 gacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcatt 17127649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 234 - 290
Target Start/End: Original strand, 46333975 - 46334031
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    |||||||| ||||||||||||||||||| |||||||||||||| ||||| |||||||    
T  46333975 gacattggccaatcacaatgtcacaatgcttgtgaaagagagaaaaacacaagcatt 46334031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 290
Target Start/End: Complemental strand, 5995493 - 5995422
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    |||| ||||||||  |||||||  ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  5995493 ttggatgacattggtgacattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcatt 5995422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 290
Target Start/End: Complemental strand, 33219697 - 33219626
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    |||| ||||||||  ||||||| ||||||||||||||| |||| |||||||||||||| ||||| |||||||    
T  33219697 ttggatgacattggtgacattgatcaatcacaatgtcataatgcttgtgaaagagagaaaaacacaagcatt 33219626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 234 - 338
Target Start/End: Complemental strand, 48498524 - 48498412
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt--------atgattgaccaatatcaccaatgtcacccaactct 325  Q
    |||||||  |||||||||||| || ||| |||||||||||||||||||| || ||||        ||||||||||||| |||| ||||||||||||||||    
T  48498524 gacattgaccaatcacaatgttaccatgcttgtgaaagagagagaaacacaaacattgtggtattatgattgaccaatgtcacaaatgtcacccaactct 48498425  T
Q  326 attttacccaagt 338  Q
    || | ||||||||    
T  48498424 atgtcacccaagt 48498412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 234 - 336
Target Start/End: Original strand, 44706812 - 44706923
Alignment:
Q  234 gacattggtcaatcacaa-tgtcacaatgtttgtgaaagagagagaaacaaaa--------gcattatgattgaccaatatcaccaatgtcacccaactc 324  Q
    |||||||| ||||||||| || ||||||| |||||||||||||||||||| ||        ||||| |||||| ||||| ||||||||||||||||||||    
T  44706812 gacattggccaatcacaaatgccacaatgcttgtgaaagagagagaaacacaagcattgcggcattgtgattggccaatgtcaccaatgtcacccaactc 44706911  T
Q  325 tattttacccaa 336  Q
    ||| | ||||||    
T  44706912 tatgtcacccaa 44706923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 290
Target Start/End: Complemental strand, 9157419 - 9157363
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    ||||||| ||||||||||| |||||||| ||| |||||||||||||||| |||||||    
T  9157419 gacattgatcaatcacaatatcacaatgcttgagaaagagagagaaacacaagcatt 9157363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 29371489 - 29371429
Alignment:
Q  222 ggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaaca 282  Q
    ||||||||||  || ||||  ||||||||||||||||||| ||||||||||||||||||||    
T  29371489 ggtgacattggtgatattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaaca 29371429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 1091582 - 1091621
Alignment:
Q  243 caatcacaatgtcacaatgtttgtgaaagagagagaaaca 282  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  1091582 caatcacaatgtcacaatgcttgtgaaagagagagaaaca 1091621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 15220906 - 15220950
Alignment:
Q  292 tgattgaccaatatcaccaatgtcacccaactctattttacccaa 336  Q
    |||||| ||||||||||||||||||||||||||||| | ||||||    
T  15220906 tgattggccaatatcaccaatgtcacccaactctatgtcacccaa 15220950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 33219663 - 33219715
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctattttacccaagtg 339  Q
    |||| ||||||| |||| |||||||||||| |||||||||| |||||||||||    
T  33219663 cattgtgattgatcaatgtcaccaatgtcatccaactctatgttacccaagtg 33219715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 338
Target Start/End: Complemental strand, 46932046 - 46931994
Alignment:
Q  286 gcattatgattgaccaatatcaccaatgtcacccaactctattttacccaagt 338  Q
    ||||| |||||| ||||| ||||||||||||||||||||||| | ||||||||    
T  46932046 gcattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaagt 46931994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 46932011 - 46932059
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    |||||||||||||  |||||||| ||||||||||| |||||||||||||    
T  46932011 ttgggtgacattggtgacattggccaatcacaatgccacaatgtttgtg 46932059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 290
Target Start/End: Original strand, 49444927 - 49444996
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    |||||||||||||  ||||| | ||||||||||||| |||||| |||||  ||||||||||||| |||||||    
T  49444927 ttgggtgacattggtgacatcgatcaatcacaatgttacaatgcttgtg--agagagagaaacacaagcatt 49444996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 276
Target Start/End: Original strand, 38674537 - 38674576
Alignment:
Q  237 attggtcaatcacaatgtcacaatgtttgtgaaagagaga 276  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  38674537 attggccaatcacaatgtcacaatgcttgtgaaagagaga 38674576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 343
Target Start/End: Original strand, 5995458 - 5995515
Alignment:
Q  286 gcattatgattgaccaatatcaccaatgtcacccaactctattttacccaagtgttac 343  Q
    ||||| ||||||  |||| |||||||||||| |||||||||| | |||||||||||||    
T  5995458 gcattgtgattggtcaatgtcaccaatgtcatccaactctatgtcacccaagtgttac 5995515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 267
Target Start/End: Original strand, 29371397 - 29371430
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    |||||||| |||||||||||||||||||||||||    
T  29371397 gacattggccaatcacaatgtcacaatgtttgtg 29371430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 267
Target Start/End: Original strand, 37155063 - 37155108
Alignment:
Q  222 ggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    ||||||||||  |||||||| ||||||||||||||||||| |||||    
T  37155063 ggtgacattggtgacattggccaatcacaatgtcacaatgcttgtg 37155108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 5694919 - 5694966
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaaca 282  Q
    ||||||||||||||||||| | | |||| ||||||||||||||||||||    
T  5694919 gacattggtcaatcacaatatta-aatgcttgtgaaagagagagaaaca 5694966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 21630056 - 21630104
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    |||||||||||||  |||||||  ||||||||||||||||||| |||||    
T  21630056 ttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 21630104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 267
Target Start/End: Complemental strand, 29179721 - 29179673
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    |||||||||||||  |||||||| ||||||||||| ||||||| |||||    
T  29179721 ttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 29179673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 339
Target Start/End: Complemental strand, 48993965 - 48993913
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctattttacccaagtg 339  Q
    |||| ||||||  |||| ||||||||||||||||||||||| | |||||||||    
T  48993965 cattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacccaagtg 48993913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 339
Target Start/End: Complemental strand, 49444961 - 49444909
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctattttacccaagtg 339  Q
    |||| ||||||| | || ||||||||||||||||||||||| | |||||||||    
T  49444961 cattgtgattgatcgatgtcaccaatgtcacccaactctatgtcacccaagtg 49444909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 8e-19; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 234 - 290
Target Start/End: Original strand, 551194 - 551250
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  551194 gacattggtcaatcacaatgccacaatgtttgtgaaagagagagaaacacaagcatt 551250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 234 - 293
Target Start/End: Original strand, 2315333 - 2315392
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcattatg 293  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  2315333 gacattgatcaatcacaatgtcacaatgtttgtgaaagagagcgaaacataagcattatg 2315392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 219 - 290
Target Start/End: Complemental strand, 12343224 - 12343153
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    |||||||| ||||  |||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  12343224 ttgggtgagattggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcatt 12343153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 10521878 - 10521938
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcattatga 294  Q
    |||||||| ||||||||||||||||||| || ||||||||||||||||| |||||||||||    
T  10521878 gacattggccaatcacaatgtcacaatgcttatgaaagagagagaaacacaagcattatga 10521938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 219 - 290
Target Start/End: Original strand, 24618615 - 24618686
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    |||||||||||||  ||||||| ||||||||||||||| |||| || ||||||||||||||||| |||||||    
T  24618615 ttgggtgacattggtgacattgatcaatcacaatgtcataatgcttatgaaagagagagaaacacaagcatt 24618686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 17751026 - 17750969
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagaga 276  Q
    |||||||| ||||| |||||||| | ||||||||||||||||| ||||||||||||||    
T  17751026 ttgggtgatattgatgacattggccgatcacaatgtcacaatgcttgtgaaagagaga 17750969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 290
Target Start/End: Complemental strand, 13043566 - 13043510
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    ||||||||  ||||||||| |||||||| |||||||||||||||||||| |||||||    
T  13043566 gacattggctaatcacaatatcacaatgcttgtgaaagagagagaaacacaagcatt 13043510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 266
Target Start/End: Original strand, 17750921 - 17750963
Alignment:
Q  224 tgacattgacgacattggtcaatcacaatgtcacaatgtttgt 266  Q
    ||||||||  |||||||||||||||||||||||||||||||||    
T  17750921 tgacattggtgacattggtcaatcacaatgtcacaatgtttgt 17750963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 246 - 327
Target Start/End: Complemental strand, 24587558 - 24587469
Alignment:
Q  246 tcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcattatga--------ttgaccaatatcaccaatgtcacccaactctat 327  Q
    |||||||||||||||| |||||||| || |||||||| ||||||| |||        ||||||||| |||| ||||||||||||||||||    
T  24587558 tcacaatgtcacaatgcttgtgaaaaagcgagaaacacaagcattgtgacattgtgattgaccaatgtcactaatgtcacccaactctat 24587469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 24587475 - 24587523
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    ||||||||||||   |||||||||||||||||||||||||||| |||||    
T  24587475 ttgggtgacattagtgacattggtcaatcacaatgtcacaatgcttgtg 24587523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 338
Target Start/End: Complemental strand, 24975801 - 24975749
Alignment:
Q  286 gcattatgattgaccaatatcaccaatgtcacccaactctattttacccaagt 338  Q
    ||||| |||||||||||| |||||||||||| |||||||||| | ||||||||    
T  24975801 gcattgtgattgaccaatgtcaccaatgtcagccaactctatgtcacccaagt 24975749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 268
Target Start/End: Original strand, 24975766 - 24975815
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtga 268  Q
    |||| ||||||||  |||||||||||||||||||| ||||||| ||||||    
T  24975766 ttggctgacattggtgacattggtcaatcacaatgccacaatgcttgtga 24975815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 24618649 - 24618609
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctat 327  Q
    |||| ||||||| |||| |||||||||||||||||||||||    
T  24618649 cattgtgattgatcaatgtcaccaatgtcacccaactctat 24618609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 219 - 290
Target Start/End: Original strand, 49717 - 49788
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    |||||||||||||| |||||||  ||||||||||||||||||| |||||||||| ||||||||| |||||||    
T  49717 ttgggtgacattgatgacattgaccaatcacaatgtcacaatgcttgtgaaagaaagagaaacacaagcatt 49788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 243 - 327
Target Start/End: Original strand, 2925 - 3006
Alignment:
Q  243 caatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcattatgattgaccaatatcaccaatgtcacccaactctat 327  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||    ||| ||||| ||||| |||||||||||||||||    
T  2925 caatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacatt---gttggccaatgtcaccgatgtcacccaactctat 3006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 219 - 338
Target Start/End: Original strand, 27234 - 27361
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcattatg--------attgaccaatatcacca 310  Q
    ||||||||||||   || ||||| |||||||||||||| |||  |||||||||||||||||||| ||||||| ||        |||| ||||||||||||    
T  27234 ttgggtgacattagtgatattggccaatcacaatgtcataattcttgtgaaagagagagaaacagaagcattgtggcattgtgattggccaatatcacca 27333  T
Q  311 atgtcacccaactctattttacccaagt 338  Q
    ||||||||||||||||| | ||||||||    
T  27334 atgtcacccaactctatatcacccaagt 27361  T

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Target: scaffold0161; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 338
Target Start/End: Complemental strand, 27268 - 27217
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctattttacccaagt 338  Q
    |||| |||||| |||||||||| |||||||||||||||||| | ||||||||    
T  27268 cattgtgattggccaatatcactaatgtcacccaactctatgtcacccaagt 27217  T

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Target: scaffold1033 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold1033
Description:

Target: scaffold1033; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 233 - 290
Target Start/End: Complemental strand, 2323 - 2266
Alignment:
Q  233 cgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||    
T  2323 cgacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcatt 2266  T

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Target: scaffold1029 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold1029
Description:

Target: scaffold1029; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 233 - 290
Target Start/End: Complemental strand, 2323 - 2266
Alignment:
Q  233 cgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||    
T  2323 cgacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcatt 2266  T

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Target: scaffold0586 (Bit Score: 44; Significance: 7e-16; HSPs: 3)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 219 - 290
Target Start/End: Original strand, 7061 - 7132
Alignment:
Q  219 ttgggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacaaaagcatt 290  Q
    |||||||||||||  || ||| | ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  7061 ttgggtgacattggtgatattagccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcatt 7132  T

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Target: scaffold0586; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 267
Target Start/End: Complemental strand, 7168 - 7123
Alignment:
Q  222 ggtgacattgacgacattggtcaatcacaatgtcacaatgtttgtg 267  Q
    ||||||||||  |||||||| ||||||||||||||||||| |||||    
T  7168 ggtgacattggtgacattggccaatcacaatgtcacaatgcttgtg 7123  T

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Target: scaffold0586; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 7095 - 7055
Alignment:
Q  287 cattatgattgaccaatatcaccaatgtcacccaactctat 327  Q
    |||| |||||| | |||||||||||||||||||||||||||    
T  7095 cattgtgattggctaatatcaccaatgtcacccaactctat 7055  T

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Target: scaffold0047 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 63866 - 63818
Alignment:
Q  234 gacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaaca 282  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  63866 gacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaaca 63818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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