View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16559_low_3 (Length: 352)

Name: NF16559_low_3
Description: NF16559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16559_low_3
NF16559_low_3
[»] chr3 (50 HSPs)
chr3 (11-352)||(16744035-16744377)
chr3 (22-346)||(13838905-13839232)
chr3 (11-346)||(14842487-14842824)
chr3 (11-272)||(17912483-17912744)
chr3 (11-346)||(2049810-2050147)
chr3 (11-346)||(12030073-12030410)
chr3 (11-309)||(15858986-15859287)
chr3 (107-272)||(2449238-2449404)
chr3 (10-282)||(51158008-51158282)
chr3 (210-352)||(19231982-19232127)
chr3 (11-265)||(15936634-15936890)
chr3 (226-346)||(19260749-19260869)
chr3 (14-265)||(15938476-15938729)
chr3 (140-272)||(13975722-13975853)
chr3 (140-272)||(45860937-45861068)
chr3 (140-272)||(13954890-13955021)
chr3 (15-347)||(15614838-15615170)
chr3 (140-260)||(55316351-55316471)
chr3 (11-238)||(16821139-16821369)
chr3 (11-120)||(47984650-47984759)
chr3 (11-120)||(48003224-48003333)
chr3 (140-260)||(41270207-41270327)
chr3 (11-120)||(47993937-47994046)
chr3 (11-120)||(48012510-48012619)
chr3 (314-352)||(17955878-17955916)
chr3 (215-256)||(14080715-14080756)
chr3 (311-352)||(15857157-15857198)
chr3 (314-352)||(2844514-2844552)
chr3 (314-352)||(3992873-3992911)
chr3 (314-352)||(54038018-54038056)
chr3 (193-346)||(54651642-54651796)
chr3 (314-352)||(55513193-55513231)
chr3 (314-346)||(2449152-2449184)
chr3 (314-346)||(16261777-16261809)
chr3 (314-346)||(16933869-16933901)
chr3 (314-346)||(17912398-17912430)
chr3 (314-346)||(23492696-23492728)
chr3 (314-346)||(38168237-38168269)
chr3 (314-346)||(53771365-53771397)
chr3 (314-352)||(7854305-7854343)
chr3 (11-128)||(12264932-12265049)
chr3 (314-346)||(11986080-11986112)
chr3 (193-265)||(11986173-11986245)
chr3 (314-346)||(13954804-13954836)
chr3 (314-346)||(14285289-14285321)
chr3 (314-346)||(19947026-19947058)
chr3 (314-346)||(30153265-30153297)
chr3 (314-346)||(33342204-33342236)
chr3 (314-346)||(45861122-45861154)
chr3 (314-346)||(51961031-51961063)
[»] chr8 (33 HSPs)
chr8 (11-272)||(22907214-22907476)
chr8 (10-346)||(16193643-16193980)
chr8 (22-346)||(24928716-24929043)
chr8 (11-346)||(43373392-43373731)
chr8 (11-352)||(16404894-16405235)
chr8 (107-272)||(5238184-5238350)
chr8 (107-272)||(24661248-24661414)
chr8 (107-272)||(43685643-43685809)
chr8 (22-272)||(17345581-17345832)
chr8 (15-260)||(6774258-6774505)
chr8 (15-260)||(24548986-24549233)
chr8 (140-256)||(21844576-21844692)
chr8 (140-256)||(21851969-21852085)
chr8 (140-260)||(30120854-30120974)
chr8 (140-260)||(16674392-16674512)
chr8 (314-352)||(24716756-24716794)
chr8 (314-352)||(274766-274804)
chr8 (314-352)||(641045-641083)
chr8 (314-352)||(826851-826889)
chr8 (28-122)||(23837214-23837308)
chr8 (314-346)||(5238404-5238436)
chr8 (314-346)||(22907128-22907160)
chr8 (314-346)||(24385652-24385684)
chr8 (314-346)||(24661162-24661194)
chr8 (314-346)||(43685863-43685895)
chr8 (11-197)||(222754-222943)
chr8 (11-197)||(736377-736566)
chr8 (11-197)||(860272-860461)
chr8 (215-256)||(23149985-23150026)
chr8 (215-256)||(23226076-23226117)
chr8 (314-346)||(2545265-2545297)
chr8 (314-346)||(3431176-3431208)
chr8 (314-346)||(22886654-22886686)
[»] chr4 (32 HSPs)
chr4 (11-272)||(26680201-26680463)
chr4 (11-346)||(13246430-13246769)
chr4 (11-346)||(15675009-15675352)
chr4 (11-352)||(54118162-54118507)
chr4 (140-346)||(122020-122226)
chr4 (107-272)||(10488659-10488825)
chr4 (107-272)||(16327926-16328092)
chr4 (75-346)||(10104170-10104449)
chr4 (11-245)||(31115629-31115865)
chr4 (210-346)||(33240901-33241043)
chr4 (140-272)||(13048221-13048353)
chr4 (11-256)||(10644219-10644467)
chr4 (240-346)||(31132545-31132657)
chr4 (11-109)||(111395-111493)
chr4 (11-260)||(47357654-47357906)
chr4 (75-256)||(40885570-40885753)
chr4 (28-122)||(41166083-41166177)
chr4 (11-56)||(10104449-10104494)
chr4 (314-346)||(14952085-14952117)
chr4 (314-346)||(15135907-15135939)
chr4 (314-346)||(15272211-15272243)
chr4 (314-346)||(16327840-16327872)
chr4 (314-346)||(16609013-16609045)
chr4 (314-346)||(26680517-26680549)
chr4 (35-122)||(15044851-15044938)
chr4 (314-352)||(5682422-5682460)
chr4 (314-352)||(25119101-25119139)
chr4 (10-122)||(52265645-52265758)
chr4 (314-346)||(8045272-8045304)
chr4 (215-255)||(13809511-13809551)
chr4 (58-122)||(13809647-13809711)
chr4 (314-346)||(16523146-16523178)
[»] scaffold0078 (3 HSPs)
scaffold0078 (11-272)||(37066-37328)
scaffold0078 (314-346)||(36980-37012)
scaffold0078 (314-352)||(41632-41670)
[»] chr7 (41 HSPs)
chr7 (11-272)||(7293017-7293279)
chr7 (13-346)||(16211768-16212103)
chr7 (16-346)||(11580661-11580997)
chr7 (11-352)||(3059966-3060309)
chr7 (11-346)||(13036938-13037277)
chr7 (11-346)||(36052667-36053003)
chr7 (107-272)||(11516324-11516490)
chr7 (107-272)||(15441564-15441730)
chr7 (107-272)||(30262129-30262295)
chr7 (11-272)||(47481031-47481294)
chr7 (11-265)||(18253842-18254098)
chr7 (11-271)||(13321014-13321278)
chr7 (11-254)||(16478968-16479213)
chr7 (140-272)||(25292338-25292470)
chr7 (140-256)||(13572808-13572924)
chr7 (144-344)||(295893-296094)
chr7 (140-260)||(10989541-10989661)
chr7 (141-261)||(2437590-2437710)
chr7 (148-260)||(13911024-13911136)
chr7 (230-272)||(14113989-14114031)
chr7 (230-272)||(14423639-14423681)
chr7 (240-346)||(36024372-36024485)
chr7 (314-352)||(126738-126776)
chr7 (314-352)||(32493940-32493978)
chr7 (314-346)||(2029244-2029276)
chr7 (314-346)||(7293333-7293365)
chr7 (314-346)||(11516544-11516576)
chr7 (314-346)||(14113903-14113935)
chr7 (314-346)||(15441478-15441510)
chr7 (277-346)||(15709428-15709501)
chr7 (314-346)||(30262043-30262075)
chr7 (314-346)||(42056188-42056220)
chr7 (314-352)||(111163-111201)
chr7 (314-352)||(1936911-1936949)
chr7 (315-352)||(7283950-7283987)
chr7 (314-346)||(371417-371449)
chr7 (314-346)||(3049905-3049937)
chr7 (314-346)||(13321334-13321366)
chr7 (314-342)||(15516765-15516793)
chr7 (314-346)||(25124450-25124482)
chr7 (314-346)||(47480944-47480976)
[»] chr1 (20 HSPs)
chr1 (11-352)||(41394222-41394565)
chr1 (11-346)||(20931345-20931682)
chr1 (11-346)||(20445679-20446019)
chr1 (11-346)||(20893551-20893889)
chr1 (11-346)||(20913037-20913367)
chr1 (11-346)||(37844374-37844714)
chr1 (11-346)||(20531444-20531783)
chr1 (107-272)||(51452589-51452755)
chr1 (11-345)||(22227809-22228146)
chr1 (11-345)||(22232506-22232843)
chr1 (15-260)||(2116258-2116506)
chr1 (140-347)||(45051554-45051759)
chr1 (140-260)||(5072388-5072508)
chr1 (140-260)||(18601118-18601238)
chr1 (314-352)||(21860334-21860372)
chr1 (314-352)||(44034865-44034903)
chr1 (314-345)||(15861327-15861358)
chr1 (215-256)||(22143361-22143402)
chr1 (280-352)||(27675086-27675156)
chr1 (314-346)||(51452809-51452841)
[»] chr2 (32 HSPs)
chr2 (11-346)||(36982364-36982704)
chr2 (16-346)||(462743-463075)
chr2 (11-352)||(19794623-19794967)
chr2 (11-346)||(8891242-8891581)
chr2 (11-352)||(43642875-43643220)
chr2 (11-352)||(20627232-20627576)
chr2 (11-346)||(24341309-24341652)
chr2 (107-272)||(19689401-19689567)
chr2 (107-272)||(23820168-23820334)
chr2 (107-272)||(14906440-14906606)
chr2 (107-272)||(20015108-20015274)
chr2 (11-272)||(25265390-25265653)
chr2 (140-272)||(17396653-17396784)
chr2 (250-346)||(22863169-22863267)
chr2 (11-222)||(7507894-7508107)
chr2 (11-260)||(19886661-19886913)
chr2 (314-352)||(22284278-22284316)
chr2 (314-352)||(22275045-22275083)
chr2 (315-352)||(15633538-15633575)
chr2 (314-347)||(19689314-19689347)
chr2 (314-346)||(9652796-9652828)
chr2 (314-346)||(14906354-14906386)
chr2 (314-346)||(23820388-23820420)
chr2 (314-345)||(25213372-25213403)
chr2 (314-346)||(7507757-7507789)
chr2 (28-88)||(9636761-9636821)
chr2 (314-346)||(17396567-17396599)
chr2 (314-346)||(20015328-20015360)
chr2 (44-88)||(24884718-24884762)
chr2 (314-346)||(28031134-28031166)
chr2 (280-346)||(31146073-31146138)
chr2 (314-346)||(33128372-33128404)
[»] scaffold0023 (3 HSPs)
scaffold0023 (11-346)||(48598-48935)
scaffold0023 (140-238)||(36225-36323)
scaffold0023 (314-346)||(61122-61154)
[»] scaffold0266 (2 HSPs)
scaffold0266 (11-346)||(1124-1462)
scaffold0266 (13-346)||(3508-3843)
[»] scaffold0195 (2 HSPs)
scaffold0195 (11-343)||(19206-19543)
scaffold0195 (11-272)||(21290-21553)
[»] scaffold0001 (2 HSPs)
scaffold0001 (22-346)||(171916-172242)
scaffold0001 (22-346)||(177619-177945)
[»] scaffold0077 (1 HSPs)
scaffold0077 (11-347)||(36836-37176)
[»] chr5 (33 HSPs)
chr5 (11-346)||(23506965-23507302)
chr5 (11-346)||(27182471-27182810)
chr5 (11-346)||(18530988-18531330)
chr5 (11-346)||(22053753-22054096)
chr5 (107-272)||(20623066-20623232)
chr5 (107-272)||(21233528-21233694)
chr5 (110-272)||(37052844-37053007)
chr5 (107-272)||(16536294-16536460)
chr5 (107-270)||(25900408-25900571)
chr5 (22-272)||(34939289-34939540)
chr5 (140-260)||(29188284-29188404)
chr5 (142-256)||(27009975-27010089)
chr5 (11-260)||(4199985-4200237)
chr5 (11-260)||(22366481-22366733)
chr5 (11-260)||(25426628-25426880)
chr5 (11-257)||(18777995-18778244)
chr5 (11-260)||(12374-12626)
chr5 (140-257)||(43443398-43443515)
chr5 (140-260)||(19500031-19500151)
chr5 (11-260)||(21073595-21073847)
chr5 (314-346)||(16105967-16105999)
chr5 (314-346)||(20623286-20623318)
chr5 (314-346)||(21233442-21233474)
chr5 (11-122)||(23493917-23494029)
chr5 (314-346)||(25900320-25900352)
chr5 (314-346)||(37053061-37053093)
chr5 (215-256)||(21310709-21310750)
chr5 (215-256)||(23981516-23981557)
chr5 (314-346)||(108728-108760)
chr5 (58-122)||(7728466-7728530)
chr5 (314-346)||(9730278-9730310)
chr5 (314-346)||(16536514-16536546)
chr5 (193-265)||(32950879-32950951)
[»] scaffold0106 (1 HSPs)
scaffold0106 (15-346)||(41733-42066)
[»] scaffold0175 (1 HSPs)
scaffold0175 (11-346)||(882-1218)
[»] chr6 (33 HSPs)
chr6 (22-346)||(23153458-23153786)
chr6 (15-345)||(14626045-14626377)
chr6 (11-272)||(35009439-35009702)
chr6 (22-272)||(1657748-1657999)
chr6 (22-272)||(15862484-15862734)
chr6 (15-347)||(1650020-1650352)
chr6 (277-346)||(23148266-23148335)
chr6 (11-260)||(25175563-25175815)
chr6 (11-114)||(27740838-27740941)
chr6 (189-272)||(27751605-27751688)
chr6 (11-260)||(27653983-27654235)
chr6 (140-260)||(16825752-16825874)
chr6 (314-352)||(19983186-19983224)
chr6 (75-272)||(29665937-29666137)
chr6 (314-352)||(35015051-35015089)
chr6 (28-121)||(18381821-18381914)
chr6 (314-346)||(18002395-18002427)
chr6 (314-346)||(23995247-23995279)
chr6 (314-346)||(26090059-26090091)
chr6 (314-345)||(4991396-4991427)
chr6 (316-346)||(15742120-15742150)
chr6 (314-352)||(18583640-18583678)
chr6 (215-256)||(16887792-16887833)
chr6 (215-256)||(33324898-33324939)
chr6 (215-256)||(35136013-35136054)
chr6 (314-346)||(1657661-1657693)
chr6 (314-346)||(15862789-15862821)
chr6 (314-346)||(18823283-18823315)
chr6 (314-346)||(18839138-18839170)
chr6 (11-98)||(22361926-22362014)
chr6 (58-122)||(25367374-25367438)
chr6 (314-346)||(27751742-27751774)
chr6 (314-346)||(32276659-32276691)
[»] scaffold0009 (1 HSPs)
scaffold0009 (17-346)||(272031-272362)
[»] scaffold0012 (2 HSPs)
scaffold0012 (22-346)||(247366-247694)
scaffold0012 (314-346)||(34075-34107)
[»] scaffold0008 (2 HSPs)
scaffold0008 (11-346)||(128095-128431)
scaffold0008 (148-238)||(31697-31787)
[»] scaffold0413 (1 HSPs)
scaffold0413 (11-346)||(5990-6326)
[»] scaffold0302 (1 HSPs)
scaffold0302 (11-346)||(12115-12450)
[»] scaffold0162 (2 HSPs)
scaffold0162 (11-346)||(26340-26678)
scaffold0162 (11-272)||(8180-8440)
[»] scaffold0018 (1 HSPs)
scaffold0018 (140-344)||(51110-51314)
[»] scaffold0498 (1 HSPs)
scaffold0498 (11-346)||(8878-9215)
[»] scaffold0218 (1 HSPs)
scaffold0218 (11-336)||(4996-5324)
[»] scaffold0011 (1 HSPs)
scaffold0011 (11-346)||(123087-123427)
[»] scaffold0025 (3 HSPs)
scaffold0025 (11-346)||(8849-9192)
scaffold0025 (11-298)||(148721-149012)
scaffold0025 (246-346)||(146838-146938)
[»] scaffold0141 (4 HSPs)
scaffold0141 (107-272)||(26892-27058)
scaffold0141 (107-265)||(22637-22796)
scaffold0141 (314-346)||(22857-22889)
scaffold0141 (314-346)||(27112-27144)
[»] scaffold0124 (2 HSPs)
scaffold0124 (107-272)||(1582-1748)
scaffold0124 (314-346)||(1496-1528)
[»] scaffold0028 (4 HSPs)
scaffold0028 (140-346)||(89378-89586)
scaffold0028 (221-346)||(107708-107835)
scaffold0028 (314-345)||(130880-130911)
scaffold0028 (215-256)||(79745-79786)
[»] scaffold0049 (2 HSPs)
scaffold0049 (11-265)||(48187-48443)
scaffold0049 (315-352)||(20493-20530)
[»] scaffold0132 (2 HSPs)
scaffold0132 (11-272)||(13506-13769)
scaffold0132 (314-346)||(13824-13856)
[»] scaffold0026 (3 HSPs)
scaffold0026 (11-265)||(107747-108003)
scaffold0026 (140-256)||(64527-64648)
scaffold0026 (215-257)||(89863-89905)
[»] scaffold0125 (2 HSPs)
scaffold0125 (11-272)||(41648-41911)
scaffold0125 (306-346)||(41957-41997)
[»] scaffold1542 (1 HSPs)
scaffold1542 (11-272)||(534-797)
[»] scaffold0772 (2 HSPs)
scaffold0772 (140-265)||(5660-5785)
scaffold0772 (314-346)||(5846-5878)
[»] scaffold0075 (1 HSPs)
scaffold0075 (11-272)||(34460-34724)
[»] scaffold0529 (1 HSPs)
scaffold0529 (15-261)||(2966-3215)
[»] scaffold0215 (2 HSPs)
scaffold0215 (15-238)||(9371-9596)
scaffold0215 (15-238)||(16269-16494)
[»] scaffold0420 (1 HSPs)
scaffold0420 (140-260)||(13325-13445)
[»] scaffold0116 (1 HSPs)
scaffold0116 (140-256)||(167-283)
[»] scaffold0022 (2 HSPs)
scaffold0022 (11-222)||(5254-5466)
scaffold0022 (215-255)||(102923-102963)
[»] scaffold0622 (1 HSPs)
scaffold0622 (11-109)||(9382-9480)
[»] scaffold0369 (1 HSPs)
scaffold0369 (11-222)||(3722-3936)
[»] scaffold0076 (1 HSPs)
scaffold0076 (11-237)||(42997-43226)
[»] scaffold1711 (1 HSPs)
scaffold1711 (140-260)||(1304-1424)
[»] scaffold0139 (2 HSPs)
scaffold0139 (140-238)||(14083-14181)
scaffold0139 (143-261)||(21115-21233)
[»] scaffold0066 (2 HSPs)
scaffold0066 (11-222)||(54416-54630)
scaffold0066 (314-346)||(45338-45370)
[»] scaffold0361 (2 HSPs)
scaffold0361 (189-272)||(3370-3453)
scaffold0361 (13-65)||(3210-3262)
[»] scaffold0034 (1 HSPs)
scaffold0034 (314-352)||(80187-80225)
[»] scaffold0456 (2 HSPs)
scaffold0456 (215-256)||(1546-1587)
scaffold0456 (215-256)||(8691-8732)
[»] scaffold0123 (1 HSPs)
scaffold0123 (215-256)||(8216-8257)
[»] scaffold0104 (1 HSPs)
scaffold0104 (11-100)||(48514-48603)
[»] scaffold0084 (1 HSPs)
scaffold0084 (147-265)||(56106-56226)
[»] scaffold0058 (2 HSPs)
scaffold0058 (215-256)||(70307-70348)
scaffold0058 (314-346)||(57392-57424)
[»] scaffold0004 (1 HSPs)
scaffold0004 (314-347)||(193396-193429)
[»] scaffold0706 (1 HSPs)
scaffold0706 (314-346)||(6443-6475)
[»] scaffold0597 (1 HSPs)
scaffold0597 (314-346)||(878-910)
[»] scaffold0465 (1 HSPs)
scaffold0465 (314-346)||(9882-9914)
[»] scaffold0251 (1 HSPs)
scaffold0251 (314-346)||(13285-13317)
[»] scaffold0032 (4 HSPs)
scaffold0032 (314-346)||(55904-55936)
scaffold0032 (314-346)||(108075-108107)
scaffold0032 (11-88)||(104793-104871)
scaffold0032 (215-256)||(93773-93814)
[»] scaffold0342 (1 HSPs)
scaffold0342 (313-352)||(346-385)
[»] scaffold0207 (1 HSPs)
scaffold0207 (303-346)||(18015-18058)
[»] scaffold0016 (2 HSPs)
scaffold0016 (313-352)||(162072-162111)
scaffold0016 (313-352)||(166158-166197)
[»] scaffold0006 (1 HSPs)
scaffold0006 (35-122)||(197390-197477)
[»] scaffold0686 (2 HSPs)
scaffold0686 (314-352)||(5771-5809)
scaffold0686 (314-352)||(5977-6015)
[»] scaffold0409 (2 HSPs)
scaffold0409 (218-256)||(1348-1386)
scaffold0409 (218-256)||(9603-9641)
[»] scaffold0184 (1 HSPs)
scaffold0184 (314-352)||(31174-31212)
[»] scaffold1164 (1 HSPs)
scaffold1164 (315-352)||(1701-1738)
[»] scaffold0970 (1 HSPs)
scaffold0970 (28-89)||(2471-2532)
[»] scaffold0876 (1 HSPs)
scaffold0876 (315-352)||(94-131)
[»] scaffold0310 (2 HSPs)
scaffold0310 (315-352)||(4-41)
scaffold0310 (315-352)||(6298-6335)
[»] scaffold0151 (1 HSPs)
scaffold0151 (215-256)||(22422-22463)
[»] scaffold0122 (2 HSPs)
scaffold0122 (315-352)||(19844-19881)
scaffold0122 (315-352)||(24148-24185)
[»] scaffold0700 (1 HSPs)
scaffold0700 (35-99)||(2548-2612)
[»] scaffold0389 (1 HSPs)
scaffold0389 (215-255)||(10868-10908)
[»] scaffold0367 (1 HSPs)
scaffold0367 (314-346)||(17209-17241)
[»] scaffold0335 (1 HSPs)
scaffold0335 (314-346)||(5476-5508)
[»] scaffold0303 (1 HSPs)
scaffold0303 (314-346)||(4346-4378)
[»] scaffold0234 (1 HSPs)
scaffold0234 (314-346)||(17304-17336)
[»] scaffold0173 (1 HSPs)
scaffold0173 (314-346)||(5549-5581)
[»] scaffold0118 (1 HSPs)
scaffold0118 (314-346)||(34308-34340)
[»] scaffold0039 (1 HSPs)
scaffold0039 (314-346)||(12418-12450)


Alignment Details
Target: chr3 (Bit Score: 275; Significance: 1e-154; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 11 - 352
Target Start/End: Complemental strand, 16744377 - 16744035
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||| |||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16744377 catcatcaatccatgaacatgtatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 16744278  T
Q  111 caactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatt 209  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||| ||| ||| |||||||||||||||||||||||    
T  16744277 caactataacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacacttatt 16744178  T
Q  210 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaat 309  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16744177 atcaattcatggatacaaacatatcatcaaagttggagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaat 16744078  T
Q  310 gatgatgattatgataaagactaacccccttaccttaattatc 352  Q
    ||||||||||||| |||||||||||| | ||||||||||||||    
T  16744077 gatgatgattatggtaaagactaacctcgttaccttaattatc 16744035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 22 - 346
Target Start/End: Original strand, 13838905 - 13839232
Alignment:
Q  22 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 121  Q
    |||||||||| |||||||||| ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| |||||| |||| |||||     
T  13838905 catgaatatgcatacccaaacaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatccaaccacaact 13839004  T
Q  122 tgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 219  Q
    |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||| |||||||||| |||| ||||||||||    
T  13839005 tagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcat 13839104  T
Q  220 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatgat 318  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13839105 gcatacaaacatatcatcacagttggagcacgaatttagcaacaattattcataatcaaaattcatacaacatttgaaaatttcacaaaatgatgatgat 13839204  T
Q  319 tatgataaagactaacccccttacctta 346  Q
    |||||| |||||||||||||||||||||    
T  13839205 tatgatgaagactaacccccttacctta 13839232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 11 - 346
Target Start/End: Complemental strand, 14842824 - 14842487
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| | |||||| | || |||||||||  | |||||| |||| |||| | ||||||||||| |||||||||| | ||||| |    
T  14842824 catcatcaatccatgaatatgcaaacccaatcaattattcatcaatcataacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat 14842725  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||||||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| ||||    
T  14842724 taacaacaacttagcaaaattcaccaattgagcacaattttcataacttatcatttttacacatttgaacatgcaatttcaccaacaatcatacaattat 14842625  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 308  Q
      |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| ||||     
T  14842624 cttcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgcaaag 14842525  T
Q  309 tgatgatgattatgataaagactaacccccttacctta 346  Q
    ||| ||||||||||||||||||||||||||||||||||    
T  14842524 tgaagatgattatgataaagactaacccccttacctta 14842487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 11 - 272
Target Start/End: Complemental strand, 17912744 - 17912483
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| |||||||| |  |||||||||||| |||||||| |||| || ||| |||||| |||| ||| ||||||||||||||||    
T  17912744 catcatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataacatcgattgaacatgaatcatagctcaatt 17912645  T
Q  111 caactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatt 209  Q
    |||||||||||| ||||||||||| |||| |||||||||||||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| ||||     
T  17912644 caactacaacatatcaaattcatcaattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttcaccaacaatcatacaattatc 17912545  T
Q  210 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  17912544 atcaattcatgcatacaaacatatcatc-aagttggagcacgaatttagcaacaattatccat 17912483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 11 - 346
Target Start/End: Original strand, 2049810 - 2050147
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | | ||||||||| |||| ||||| | ||||| |    
T  2049810 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccatagcatcaattgaacaaaaatcaaatctcaaat 2049909  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| || || |||| | ||||||||| |||||| ||| | |||||||||| |||| ||||    
T  2049910 taacaacaacttagcaaaattcaccaattgagcacaattttcacaagttatcatgtttacatatttgaacatgtaatttcaccaacaatcttacaattat 2050009  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 308  Q
     ||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||| || ||||||    
T  2050010 catcaattcaggcatacaaacatatcgtcacagttggagcacgaatttagcaacaattatccataagcaaaattgatacaacatttgaaatttcacaaaa 2050109  T
Q  309 tgatgatgattatgataaagactaacccccttacctta 346  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2050110 tgatgatgattatgataaagactaacccccttacctta 2050147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 11 - 346
Target Start/End: Complemental strand, 12030410 - 12030073
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| | |||||| |||| || | | | ||||||||| |||||||||| |  |||| |    
T  12030410 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccataacatcaattaacaaccatagcatcaattgaacaagaatcaaatatcaaat 12030311  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||| | ||| |  |||| |||| | |||  |||||| ||||| ||||| ||| || ||||||||| |||||| ||| | |||||||||| |||| ||||    
T  12030310 taacaataacttagcaaaattcaccaattgagcacaactttcacaacttatcacttttacatatttgaacatgtaatttcaccaacaatcttacaattat 12030211  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 308  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||| || ||||||    
T  12030210 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaagtcatacaacatttgaaatttcacaaaa 12030111  T
Q  309 tgatgatgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||| || ||||||||||||||||    
T  12030110 tgatgatgattatgataatgattaacccccttacctta 12030073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 11 - 309
Target Start/End: Complemental strand, 15859287 - 15858986
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| |||||||    
T  15859287 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatt 15859188  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | ||||||| |||||| ||| | ||||||||||||||| ||||    
T  15859187 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcatatttgaacatgtaatttcaccaacaatcatacaattat 15859088  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 306  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||   ||||||||||||||| ||| ||||||||||    
T  15859087 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacaattg-aaatttacaa 15858989  T
Q  307 aat 309  Q
    |||    
T  15858988 aat 15858986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 107 - 272
Target Start/End: Complemental strand, 2449404 - 2449238
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 205  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  2449404 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 2449305  T
Q  206 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2449304 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 2449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 10 - 282
Target Start/End: Complemental strand, 51158282 - 51158008
Alignment:
Q  10 acatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 109  Q
    ||||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||    
T  51158282 acatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaat 51158183  T
Q  110 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 207  Q
      ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||    
T  51158182 ctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaatta 51158083  T
Q  208 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaatt 282  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||    
T  51158082 tcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaatt 51158008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 210 - 352
Target Start/End: Original strand, 19231982 - 19232127
Alignment:
Q  210 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaattt-acaa 306  Q
    ||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||| ||||    
T  19231982 atcaattcatgaatataaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttcacaa 19232081  T
Q  307 aatgatgatgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  19232082 aatgatgatgattaagataaagactaacccccttaccttaattatc 19232127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 11 - 265
Target Start/End: Complemental strand, 15936890 - 15936634
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| |||| ||  | || |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| |    
T  15936890 catcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat 15936791  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||| ||||| | ||||| |||| | |||  |||||||||||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| ||||    
T  15936790 taacaacaacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattat 15936691  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 265  Q
     ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  15936690 catcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaat 15936634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 226 - 346
Target Start/End: Complemental strand, 19260869 - 19260749
Alignment:
Q  226 aaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgata 325  Q
    ||||||||||||| | || ||||||||||||||||||||| ||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19260869 aaacatatcatcataattagagcacgaatttagcaacaattatccataaaaaaaattcatacaacatttgaaaacttacaaaatgatgatgattatgata 19260770  T
Q  326 aagactaacccccttacctta 346  Q
    |||||||||||||||||||||    
T  19260769 aagactaacccccttacctta 19260749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 14 - 265
Target Start/End: Complemental strand, 15938729 - 15938476
Alignment:
Q  14 catcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaa 113  Q
    |||||||||||||||||| |||| ||  | || |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| | ||    
T  15938729 catcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaa 15938630  T
Q  114 ctacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattat 211  Q
    | ||||| | ||||| |||| | |||  |||||||||||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| |||| ||    
T  15938629 caacaacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcat 15938530  T
Q  212 caattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 265  Q
    |||||||||  |||||||||||||| | |||||||||||| |||||| ||||||    
T  15938529 caattcatgattacaaacatatcattacagttggagcacgtatttagtaacaat 15938476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 140 - 272
Target Start/End: Complemental strand, 13975853 - 13975722
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 239  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| |||   ||||||||||||||| | || | |||||||||||||||| |||||||||||    
T  13975853 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa 13975755  T
Q  240 agttggagcacgaatttagcaacaatcatccat 272  Q
    |||||||||||||||||||||||||| ||||||    
T  13975754 agttggagcacgaatttagcaacaattatccat 13975722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 140 - 272
Target Start/End: Original strand, 45860937 - 45861068
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 239  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| |||   ||||||||||||||| | || | |||||||||||||||| |||||||||||    
T  45860937 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa 45861035  T
Q  240 agttggagcacgaatttagcaacaatcatccat 272  Q
    |||||||||||||||||||||||||| ||||||    
T  45861036 agttggagcacgaatttagcaacaattatccat 45861068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 140 - 272
Target Start/End: Complemental strand, 13955021 - 13954890
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 239  Q
    ||||||| |||||||||  |||||| ||| |||||||||||| |||   ||||||||||||||| | || | |||||||||||||||| |||||||||||    
T  13955021 gcacaatattcataactgatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa 13954923  T
Q  240 agttggagcacgaatttagcaacaatcatccat 272  Q
    |||||||||||||||||||||||||| ||||||    
T  13954922 agttggagcacgaatttagcaacaattatccat 13954890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 15 - 347
Target Start/End: Original strand, 15614838 - 15615170
Alignment:
Q  15 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 114  Q
    |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |||||||||||  ||||||||| | | ||| | |||    
T  15614838 atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatcccaaattaac 15614937  T
Q  115 tacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc 212  Q
     | ||| | |  ||||||| | |||  |||| || |||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| |||    
T  15614938 aataacttagcaaaattcaccaattgagcaccatattcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcctacaattatcatc 15615037  T
Q  213 aattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatga 311  Q
    |||||||||||||||| ||| || || |||  |||||| ||| |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||||| |    
T  15615038 aattcatgcatacaaatataacaccacagtaagagcacaaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaaaatta 15615135  T
Q  312 tgatgattatgataaagactaacccccttaccttaa 347  Q
      ||||||||||||||||||||||||||||||||||    
T  15615136 -catgattatgataaagactaacccccttaccttaa 15615170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 55316351 - 55316471
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 239  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  55316351 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 55316450  T
Q  240 agttggagcacgaatttagca 260  Q
    ||   ||||||||||||||||    
T  55316451 agcaagagcacgaatttagca 55316471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 238
Target Start/End: Original strand, 16821139 - 16821369
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||| |||||||||||||| | |||||| | || |||||||||  | || ||| | || |||  | ||||||||||| ||| |||||| | ||||| |    
T  16821139 catcattaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 16821238  T
Q  111 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 207  Q
    |||| ||||| |  |  ||||||| | |||| |||||||  ||||| |||  ||||| ||||||||| |||||| ||| | ||||||||||||||| |||    
T  16821239 caacaacaacttaggagaaattcaccaatttagcacaatactcatagcttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaatta 16821338  T
Q  208 ttatcaattcatgcatacaaacatatcatca 238  Q
    | ||||||| ||||||||||||||| |||||    
T  16821339 tcatcaatttatgcatacaaacataacatca 16821369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 47984650 - 47984759
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| ||||||||   ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||| | ||||||     
T  47984650 catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc 47984749  T
Q  111 caactacaac 120  Q
    |||| |||||    
T  47984750 caacaacaac 47984759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 48003224 - 48003333
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| ||||||||   ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||| | ||||||     
T  48003224 catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc 48003323  T
Q  111 caactacaac 120  Q
    |||| |||||    
T  48003324 caacaacaac 48003333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 41270207 - 41270327
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 239  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| |||   |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  41270207 gcacaatattcataacttatcatttttgcatatatgaacatgtaattccaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 41270306  T
Q  240 agttggagcacgaatttagca 260  Q
    ||   ||||||||||||||||    
T  41270307 agcaagagcacgaatttagca 41270327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 47993937 - 47994046
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| ||||||||   ||||||||||||| |||| ||| |||| || ||| ||||||||||| ||| |||||| | ||||||     
T  47993937 catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc 47994036  T
Q  111 caactacaac 120  Q
    |||| |||||    
T  47994037 caacaacaac 47994046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 48012510 - 48012619
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| ||||||||   ||||||||||||| |||| ||| |||| || ||| ||||||||||| ||| |||||| | ||||||     
T  48012510 catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc 48012609  T
Q  111 caactacaac 120  Q
    |||| |||||    
T  48012610 caacaacaac 48012619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 17955916 - 17955878
Alignment:
Q  314 atgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17955916 atgattatgataaagactaacccccttaccttaattatc 17955878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 14080715 - 14080756
Alignment:
Q  215 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 256  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  14080715 ttcatgcatacaaacatatcatcatagttggagcacgaattt 14080756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 352
Target Start/End: Complemental strand, 15857198 - 15857157
Alignment:
Q  311 atgatgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  15857198 atgatgattatgatgaagactaacccccttaccttaattatc 15857157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 2844514 - 2844552
Alignment:
Q  314 atgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  2844514 atgattatgataaaaactaacccccttaccttaattatc 2844552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 3992873 - 3992911
Alignment:
Q  314 atgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  3992873 atgattatgataaaaactaacccccttaccttaattatc 3992911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 54038056 - 54038018
Alignment:
Q  314 atgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  54038056 atgattatgataaaaactaacccccttaccttaattatc 54038018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 346
Target Start/End: Original strand, 54651642 - 54651796
Alignment:
Q  193 acaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaaca 291  Q
    ||||||||||| |||| ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||||||| || ||| || | |  |||||||||||    
T  54651642 acaatcatacaattatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattattcatcaacccattttcatacaaca 54651741  T
Q  292 tttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 346  Q
    |  |||| |  | ||| |||  ||||||||||| ||||| |||||||||||||||    
T  54651742 tgagaaattgcaaaaattgaacatgattatgatgaagacaaacccccttacctta 54651796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 55513193 - 55513231
Alignment:
Q  314 atgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  55513193 atgattatgataaaaactaacccccttaccttaattatc 55513231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 2449184 - 2449152
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  2449184 atgattatgataaagactaacccccttacctta 2449152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 16261777 - 16261809
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  16261777 atgattatgataaagactaacccccttacctta 16261809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 16933901 - 16933869
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  16933901 atgattatgataaagactaacccccttacctta 16933869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 17912430 - 17912398
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  17912430 atgattatgataaagactaacccccttacctta 17912398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 23492696 - 23492728
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  23492696 atgattatgataaagactaacccccttacctta 23492728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 38168237 - 38168269
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  38168237 atgattatgataaagactaacccccttacctta 38168269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 53771365 - 53771397
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  53771365 atgattatgataaagactaacccccttacctta 53771397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 7854305 - 7854343
Alignment:
Q  314 atgattatgataaagactaacccccttaccttaattatc 352  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  7854305 atgattatgatgaaaactaacccccttaccttaattatc 7854343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 12265049 - 12264932
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||||||| | |||||||||||||   || ||||| | || ||||||||  |||  | ||||||||||||| | ||| |||||| | |||| ||    
T  12265049 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcattt 12264950  T
Q  111 caactacaacatgtcaaa 128  Q
    |||| ||||||| |||||    
T  12264949 caacaacaacatatcaaa 12264932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 11986112 - 11986080
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  11986112 atgattatgatgaagactaacccccttacctta 11986080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 11986245 - 11986173
Alignment:
Q  193 acaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 265  Q
    ||||||||||| |||| || || ||||||| || || ||| ||||| |||| ||||||||||||| |||||||    
T  11986245 acaatcatacaattatcattaaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaat 11986173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 13954836 - 13954804
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||| |||||||||||||||||||||||    
T  13954836 atgattatggtaaagactaacccccttacctta 13954804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 14285289 - 14285321
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  14285289 atgattatgatgaagactaacccccttacctta 14285321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 19947026 - 19947058
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  19947026 atgattatgatgaagactaacccccttacctta 19947058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 30153265 - 30153297
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||| ||||||||||||||||||    
T  30153265 atgattatgataaaaactaacccccttacctta 30153297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 33342204 - 33342236
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||||||||||||||| |||||||||    
T  33342204 atgattatgataaagactaaccctcttacctta 33342236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 45861122 - 45861154
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||| |||||||||||||||||||||||    
T  45861122 atgattatggtaaagactaacccccttacctta 45861154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 51961063 - 51961031
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  51961063 atgattatgatgaagactaacccccttacctta 51961031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 11 - 272
Target Start/End: Complemental strand, 22907476 - 22907214
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22907476 catcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 22907377  T
Q  111 caactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatt 209  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |||||    
T  22907376 caactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattatt 22907277  T
Q  210 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22907276 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 22907214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 10 - 346
Target Start/End: Complemental strand, 16193980 - 16193643
Alignment:
Q  10 acatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 109  Q
    ||||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||| | |||||     
T  16193980 acatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaa 16193881  T
Q  110 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 207  Q
    | ||| ||||  || |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| |  |||||||||||||| |||    
T  16193880 ttaacaacaatttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttccccaacaatcatacaatta 16193781  T
Q  208 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaa 307  Q
    | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||    
T  16193780 tcatcaattcatgcatacaaacatatcatcatagttggagcacgaatttagcaacaatcatccataagcaaaattcatacaatatttgaaaatttaccaa 16193681  T
Q  308 atgatgatgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  16193680 atgatgatgattatgataaagactaa-ccccttacctta 16193643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 22 - 346
Target Start/End: Complemental strand, 24929043 - 24928716
Alignment:
Q  22 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 121  Q
    |||||||||| |||||||| | ||||||||||||  |||||||| |||| || | | ||| ||||||| ||||||  |||| |||||| |||| |||||     
T  24929043 catgaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacaaccataacctcaattgaacaagagacataactcaatccaaccacaact 24928944  T
Q  122 tgtc-aaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 219  Q
    |  | ||||||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||    
T  24928943 tagcgaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcat 24928844  T
Q  220 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatgat 318  Q
    |||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  24928843 gcatacaaacatataatcacagttggagcacgaatttagcaacaattatccataatcaaaattcatacaacatttgaaaatttcacaaaatgacgatgat 24928744  T
Q  319 tatgataaagactaacccccttacctta 346  Q
    ||||||||||||||||||| ||||||||    
T  24928743 tatgataaagactaaccccattacctta 24928716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 11 - 346
Target Start/End: Complemental strand, 43373731 - 43373392
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| |||||||| | || |||||||||| |||||||| |||| || | | | ||||||||| |||||||||| | ||||| |    
T  43373731 catcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccatagcatcaattgaacaagaatcaaatctcaaat 43373632  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||| | ||||    
T  43373631 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatataattat 43373532  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 306  Q
     |||||||||||||||||||| |||||||| |||||||||||||||||||||  ||| |||||| ||   |||||||||||||||||||||| || ||||    
T  43373531 catcaattcatgcatacaaacgtatcatcacagttggagcacgaatttagcattaattatccattatacaaaaattcatacaacatttgaaatttcacaa 43373432  T
Q  307 aatgatgatgattatgataaagactaacccccttacctta 346  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  43373431 aatgatgatgattatgataaagactaacccccttacctta 43373392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 11 - 352
Target Start/End: Complemental strand, 16405235 - 16404894
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| ||||||| || |||||||| |  |||||||||||||| |||||| |||| || ||| ||||||||||| ||||||||||||  ||||||    
T  16405235 catcatcaattcatgaatttgcatacccaagcagtgattcatcaactaaaacatcaattaacaacaataacatcaattgaacaagaatcatatgtcaatt 16405136  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     |||   ||| |  |||| |||| | |||  |||||||||||| |||||  ||||| | | ||||| |||||| ||| | ||||||||||||||| ||||    
T  16405135 taac---aacttagcaaaattcaccaattgagcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattat 16405039  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 306  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||| ||   |||||||||||||||||||||||||||| |    
T  16405038 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaataattatccatcatgcaaaaattcatacaacatttgaaaatttac-a 16404940  T
Q  307 aatgatgatgattatgataaagactaacccccttaccttaattatc 352  Q
    ||| |||||||||||||| |||||||||||||||||||||||||||    
T  16404939 aataatgatgattatgatgaagactaacccccttaccttaattatc 16404894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 107 - 272
Target Start/End: Original strand, 5238184 - 5238350
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 205  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  5238184 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 5238283  T
Q  206 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5238284 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 5238350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 107 - 272
Target Start/End: Complemental strand, 24661414 - 24661248
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 205  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  24661414 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 24661315  T
Q  206 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24661314 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 24661248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 107 - 272
Target Start/End: Original strand, 43685643 - 43685809
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 205  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  43685643 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 43685742  T
Q  206 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43685743 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 43685809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 22 - 272
Target Start/End: Original strand, 17345581 - 17345832
Alignment:
Q  22 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 121  Q
    |||||||||| |||||||| |  |||||||||||| |||||||| |||| || ||| || ||||| || |||||||||||| ||||||||| | | |||     
T  17345581 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataatatcaactgaacaagaatcataactcaattca-caataact 17345679  T
Q  122 tgtcaaattc-atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 219  Q
    |  |||| || ||| |||  ||||||||||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| ||||||||||    
T  17345680 tagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcat 17345779  T
Q  220 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    ||||| ||||||| ||||| |||| |||||||||||| |||||||| ||||||    
T  17345780 gcatataaacataacatcacagttagagcacgaatttcgcaacaattatccat 17345832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 15 - 260
Target Start/End: Complemental strand, 6774505 - 6774258
Alignment:
Q  15 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 114  Q
    |||||| |||||||||| |||||||| |  |||||||||||| |||||||| | || || ||| |||||||||||  ||||||||| | ||||| | |||    
T  6774505 atcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaattaac 6774406  T
Q  115 tacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc 212  Q
     | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||    
T  6774405 aataacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatc 6774306  T
Q  213 aattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 260  Q
    |||||||||||||||||||| ||||| |||  |||||||||| |||||    
T  6774305 aattcatgcatacaaacataacatcacagtaagagcacgaatctagca 6774258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 15 - 260
Target Start/End: Original strand, 24548986 - 24549233
Alignment:
Q  15 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 114  Q
    |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |||||||||||  ||||||||| | | ||| | |||    
T  24548986 atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatcccaaattaac 24549085  T
Q  115 tacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc 212  Q
     | ||| |  |||| |||| | |||  |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||    
T  24549086 aataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatc 24549185  T
Q  213 aattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 260  Q
    |||||||||||||||||||| ||||| |||  |||||||||| |||||    
T  24549186 aattcatgcatacaaacataacatcacagtaagagcacgaatctagca 24549233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 140 - 256
Target Start/End: Complemental strand, 21844692 - 21844576
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 239  Q
    ||||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||     
T  21844692 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac 21844593  T
Q  240 agttggagcacgaattt 256  Q
    ||   ||||||||||||    
T  21844592 agcaagagcacgaattt 21844576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 140 - 256
Target Start/End: Complemental strand, 21852085 - 21851969
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 239  Q
    ||||||| |||||||||| |||||| |||||||||||||||  ||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||     
T  21852085 gcacaatattcataacttatcatttttacatatttaaacatttaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac 21851986  T
Q  240 agttggagcacgaattt 256  Q
    ||   ||||||||||||    
T  21851985 agcaagagcacgaattt 21851969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 30120854 - 30120974
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 239  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  || |||||||||||||||||||| |||||     
T  30120854 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcatacaaacataacatcac 30120953  T
Q  240 agttggagcacgaatttagca 260  Q
    ||   ||||||||||||||||    
T  30120954 agcaagagcacgaatttagca 30120974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 16674512 - 16674392
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 239  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  || |||||||||||| ||||||| |||||     
T  16674512 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcataaaaacataacatcac 16674413  T
Q  240 agttggagcacgaatttagca 260  Q
    ||   ||||||||||||||||    
T  16674412 agaaagagcacgaatttagca 16674392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 24716794 - 24716756
Alignment:
Q  314 atgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24716794 atgattatgataaagactaacccccttaccttaattatc 24716756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 274766 - 274804
Alignment:
Q  314 atgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  274766 atgattatgataaaaactaacccccttaccttaattatc 274804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 641083 - 641045
Alignment:
Q  314 atgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  641083 atgattatgataaaaactaacccccttaccttaattatc 641045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 826889 - 826851
Alignment:
Q  314 atgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  826889 atgattatgataaaaactaacccccttaccttaattatc 826851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 23837214 - 23837308
Alignment:
Q  28 tatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 122  Q
    |||| |||||||| | |||| |||||||| ||||||||  |||||| ||||||||||||||| ||| || || || | ||||||||| |||||||    
T  23837214 tatgaatacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttaccacaattcaacaacaacat 23837308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 5238404 - 5238436
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  5238404 atgattatgataaagactaacccccttacctta 5238436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 22907160 - 22907128
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  22907160 atgattatgataaagactaacccccttacctta 22907128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 24385684 - 24385652
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  24385684 atgattatgataaagactaacccccttacctta 24385652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 24661194 - 24661162
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  24661194 atgattatgataaagactaacccccttacctta 24661162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 43685863 - 43685895
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  43685863 atgattatgataaagactaacccccttacctta 43685895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 197
Target Start/End: Complemental strand, 222943 - 222754
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  222943 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 222844  T
Q  111 caactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaat 197  Q
     ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||    
T  222843 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 222754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 197
Target Start/End: Complemental strand, 736566 - 736377
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  736566 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 736467  T
Q  111 caactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaat 197  Q
     ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||    
T  736466 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 736377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 197
Target Start/End: Complemental strand, 860461 - 860272
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  860461 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 860362  T
Q  111 caactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaat 197  Q
     ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||    
T  860361 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 860272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 23149985 - 23150026
Alignment:
Q  215 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 256  Q
    ||||||||| |||||||||||||| | |||||||||||||||    
T  23149985 ttcatgcattcaaacatatcatcataattggagcacgaattt 23150026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 256
Target Start/End: Complemental strand, 23226117 - 23226076
Alignment:
Q  215 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 256  Q
    |||||||||||||||||||||||| |||| |||||| |||||    
T  23226117 ttcatgcatacaaacatatcatcatagttagagcacaaattt 23226076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 2545265 - 2545297
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  2545265 atgattatgatgaagactaacccccttacctta 2545297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 3431208 - 3431176
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  3431208 atgattatgatgaagactaacccccttacctta 3431176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 22886654 - 22886686
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  22886654 atgattatgattaagactaacccccttacctta 22886686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 11 - 272
Target Start/End: Original strand, 26680201 - 26680463
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26680201 catcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 26680300  T
Q  111 caactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatt 209  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| |||||| |||||||||||||||| ||| ||||||||||||||||| |||||    
T  26680301 caactacaacatgtcaaattcatctattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattatt 26680400  T
Q  210 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26680401 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 26680463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 11 - 346
Target Start/End: Original strand, 13246430 - 13246769
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||     
T  13246430 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatc 13246529  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| ||||    
T  13246530 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattat 13246629  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaa 306  Q
     || |||||||||||||||||||||||||| ||||| |||||||||||| ||||||| |||||| ||   ||||||||||||||||||||||||||||||    
T  13246630 cattaattcatgcatacaaacatatcatcacagttgtagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaa 13246729  T
Q  307 aatgatgatgattatgataaagactaacccccttacctta 346  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13246730 aatgatgatgattatgataaagactaacccccttacctta 13246769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 11 - 346
Target Start/End: Complemental strand, 15675352 - 15675009
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| ||||||||||||||||||| | ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  15675352 catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaatt 15675253  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| ||||    
T  15675252 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattat 15675153  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaa 306  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || |||    
T  15675152 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaa 15675053  T
Q  307 a----atgatgatgattatgataaagactaacccccttacctta 346  Q
    |    ||||||||||||||||| |||||||||||||||||||||    
T  15675052 aaatgatgatgatgattatgatgaagactaacccccttacctta 15675009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 11 - 352
Target Start/End: Complemental strand, 54118507 - 54118162
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| || |||     
T  54118507 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaactataacatcaattgaacaagaatcataactaaatc 54118408  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| ||| || | | ||||| |||||| ||| | ||||||||||||||| ||||    
T  54118407 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcaattgttcctatttgaacatgtaatttcaccaacaatcatacaattat 54118308  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 306  Q
     ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||| ||||    
T  54118307 catcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcacaa 54118208  T
Q  307 aatgatgatgattatgataaagactaacccccttaccttaattatc 352  Q
    ||| |||||||||||||| |||||||||||||||||||||||||||    
T  54118207 aataatgatgattatgatgaagactaacccccttaccttaattatc 54118162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 140 - 346
Target Start/End: Original strand, 122020 - 122226
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 239  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| |||||||||||||||||||||||||||||     
T  122020 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 122119  T
Q  240 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 339  Q
    ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  122120 agttggagcacaaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaatcccct 122219  T
Q  340 tacctta 346  Q
    |||||||    
T  122220 tacctta 122226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 107 - 272
Target Start/End: Original strand, 10488659 - 10488825
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 205  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  10488659 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 10488758  T
Q  206 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10488759 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 10488825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 107 - 272
Target Start/End: Complemental strand, 16328092 - 16327926
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 205  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  16328092 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 16327993  T
Q  206 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16327992 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 16327926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 75 - 346
Target Start/End: Complemental strand, 10104449 - 10104170
Alignment:
Q  75 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatat 172  Q
    ||||||||||||||| ||| |||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| ||||||     
T  10104449 caacaacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataa 10104350  T
Q  173 ttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca- 271  Q
    || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||     
T  10104349 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacggatttagcaacaattatccaa 10104250  T
Q  272 -taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaacccccttacctta 346  Q
     ||   ||||||||||| ||||||||||| ||  |||    ||||||||||||||||| |||||||||||||||||||||    
T  10104249 ttatgaaaaattcataccacatttgaaaaattgtaaaaatgatgatgatgattatgatgaagactaacccccttacctta 10104170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 11 - 245
Target Start/End: Original strand, 31115629 - 31115865
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| ||||||||||||||||||| | ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  31115629 catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaatt 31115728  T
Q  111 caactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
    |||| ||||| | |  ||||||| | |||  ||| |||||||| |||||| ||||| |||||| |  |||||| ||| | ||||||||||||||| ||||    
T  31115729 caacaacaacttaggaaaattcaccaattgagcataattttcacaacttcacatttttacataatggaacatgtaatttcaccaacaatcatacaattat 31115828  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttgg 245  Q
     ||||||||||||||||||||||||||||| ||||||    
T  31115829 catcaattcatgcatacaaacatatcatcacagttgg 31115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 210 - 346
Target Start/End: Original strand, 33240901 - 33241043
Alignment:
Q  210 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa 307  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    
T  33240901 atcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaa 33241000  T
Q  308 ----atgatgatgattatgataaagactaacccccttacctta 346  Q
        ||||||||||||||||| |||||||||||||||||||||    
T  33241001 aatgatgatgatgattatgatgaagactaacccccttacctta 33241043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 140 - 272
Target Start/End: Complemental strand, 13048353 - 13048221
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 239  Q
    ||||||| |||||||||| || ||| |||||||||||||||| ||| | ||||||||||||||| | || ||||| |||||||||||||||||||||  |    
T  13048353 gcacaatattcataacttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaaatcatgcatacaaacatatcattga 13048254  T
Q  240 agttggagcacgaatttagcaacaatcatccat 272  Q
    |||||||||| ||||||||||||||| ||||||    
T  13048253 agttggagcatgaatttagcaacaattatccat 13048221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 256
Target Start/End: Original strand, 10644219 - 10644467
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| | |||||| | || |||||||||  | || ||| | || |||  | ||||||||||| ||| |||||| | ||||| |    
T  10644219 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 10644318  T
Q  111 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 207  Q
    |||| ||||| |  |  ||||||| | |||| |||||||  |||||||||  ||||| ||||||||| |||||| ||| | || |||||||||||| |||    
T  10644319 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcactaacaatcatacaatta 10644418  T
Q  208 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 256  Q
    | ||||||||||||||||||||||| ||||| ||   ||||||||||||    
T  10644419 tcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 10644467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 240 - 346
Target Start/End: Original strand, 31132545 - 31132657
Alignment:
Q  240 agttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaa 333  Q
    |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    |||||||| |||||||| ||||||||    
T  31132545 agttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgataattatgatgaagactaa 31132644  T
Q  334 cccccttacctta 346  Q
    |||||||||||||    
T  31132645 cccccttacctta 31132657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 111395 - 111493
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 109  Q
    |||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||    
T  111395 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataactcaat 111493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 260
Target Start/End: Original strand, 47357654 - 47357906
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||  |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  47357654 catcatcaatccatgaatatacatacccaatcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 47357753  T
Q  111 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 207  Q
     ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||    
T  47357754 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 47357853  T
Q  208 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 260  Q
      |||||| |||||||||||||||| ||||| ||   ||||||||||||||||    
T  47357854 acatcaatccatgcatacaaacataacatcacagcaagagcacgaatttagca 47357906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 256
Target Start/End: Complemental strand, 40885753 - 40885570
Alignment:
Q  75 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacata- 171  Q
    ||||||||||||||| ||| |||||||| ||||||||||| | ||| |  |||| |||| | |||  ||| ||||| ||||||||  ||||| ||||||     
T  40885753 caacaacatcaattgaacatgaatcatatctcaattcaacaataacttagcaaagttcaccaattgagcataattt-cataacttgacatttatacatac 40885655  T
Q  172 tttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 256  Q
    ||| |||||| ||| | |||||||| ||| || |||| | ||||||||||||||||||||| || || |||||||| ||||||||    
T  40885654 tttgaacatgtaatttcaccaacaaacattcaattatcaccaattcatgcatacaaacatagcaccacagttggagtacgaattt 40885570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 41166177 - 41166083
Alignment:
Q  28 tatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 122  Q
    |||| |||||||| | ||||||||||||| ||||||||  |||||| ||||||||||||||| ||| || || |  | ||||||||| |||||||    
T  41166177 tatgaatacccaagccatgattcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttgccacaattcaacaacaacat 41166083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 10104494 - 10104449
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaac 56  Q
    |||||||||| ||||||||||||||||||| | |||||||||||||    
T  10104494 catcatcaattcatgaatatgtatacccaagcaatgattcatcaac 10104449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 14952085 - 14952117
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  14952085 atgattatgataaagactaacccccttacctta 14952117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 15135939 - 15135907
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  15135939 atgattatgataaagactaacccccttacctta 15135907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 15272243 - 15272211
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  15272243 atgattatgataaagactaacccccttacctta 15272211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 16327872 - 16327840
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  16327872 atgattatgataaagactaacccccttacctta 16327840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 16609045 - 16609013
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  16609045 atgattatgataaagactaacccccttacctta 16609013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 26680517 - 26680549
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  26680517 atgattatgataaagactaacccccttacctta 26680549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 122
Target Start/End: Original strand, 15044851 - 15044938
Alignment:
Q  35 acccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 122  Q
    |||||| | |||| |||||| | ||||||||  |||||| ||||||||||||||| ||| ||||| || | ||||||||| |||||||    
T  15044851 acccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat 15044938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 5682460 - 5682422
Alignment:
Q  314 atgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  5682460 atgattatgataaaaactaacccacttaccttaattatc 5682422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 25119139 - 25119101
Alignment:
Q  314 atgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  25119139 atgattatgataaaaactaactcccttaccttaattatc 25119101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 122
Target Start/End: Complemental strand, 52265758 - 52265645
Alignment:
Q  10 acatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 108  Q
    ||||||||||  ||||||| ||| | |||||| | |||| ||||||||  ||| |||  |||||| ||||||||||||||| ||| ||||| || | |||    
T  52265758 acatcatcaaatcatgaattatgaacacccaagccatgaatcatcaacatcaatatcacttagcaacaacaacatcaattgaacatgaatcttatcacaa 52265659  T
Q  109 ttcaactacaacat 122  Q
    |||||| |||||||    
T  52265658 ttcaacaacaacat 52265645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 8045272 - 8045304
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  8045272 atgattatgatgaagactaacccccttacctta 8045304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 13809551 - 13809511
Alignment:
Q  215 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 255  Q
    ||||||||| |||||||||||||| | ||||||||||||||    
T  13809551 ttcatgcattcaaacatatcatcataattggagcacgaatt 13809511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 122
Target Start/End: Complemental strand, 13809711 - 13809647
Alignment:
Q  58 acaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 122  Q
    |||||||| ||||||| |||||||||||||||  || ||||| || | ||||||||| |||||||    
T  13809711 acaacatcaattagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacat 13809647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 16523146 - 16523178
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  16523146 atgattatgatgaagactaacccccttacctta 16523178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 211; Significance: 1e-115; HSPs: 3)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 11 - 272
Target Start/End: Complemental strand, 37328 - 37066
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  37328 catcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatc 37229  T
Q  111 caactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatt 209  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |||||    
T  37228 caactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattatt 37129  T
Q  210 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37128 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 37066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 37012 - 36980
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  37012 atgattatgataaagactaacccccttacctta 36980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 41632 - 41670
Alignment:
Q  314 atgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||| ||||||| ||||||||||||||||||||||||    
T  41632 atgattgtgataaaaactaacccccttaccttaattatc 41670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 211; Significance: 1e-115; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 11 - 272
Target Start/End: Original strand, 7293017 - 7293279
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7293017 catcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 7293116  T
Q  111 caactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatt 209  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |||||    
T  7293117 caacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattatt 7293216  T
Q  210 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7293217 attaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 7293279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 13 - 346
Target Start/End: Original strand, 16211768 - 16212103
Alignment:
Q  13 tcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattca 112  Q
    |||| ||| |||||||||| |||||||| | |||| |||||||| |||||||| |||| || | | ||||||||||  |||||||||| | ||||| | |    
T  16211768 tcattaattcatgaatatgcatacccaagcaatgaatcatcaaccacaacatcaattaacaaccataacatcaatttaacaagaatcaaatctcaaatta 16211867  T
Q  113 actacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatta 210  Q
    || ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | || ||||||| |||| |||| |    
T  16211868 acaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgcaatttcacaaacaatcttacaattatca 16211967  T
Q  211 tcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatg 310  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||| || ||||||||    
T  16211968 tcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattgtccataagcaaaattcatacaacatttgaaatttcacaaaatg 16212067  T
Q  311 atgatgattatgataaagactaacccccttacctta 346  Q
    ||||||||||||||||||||||||||||||||||||    
T  16212068 atgatgattatgataaagactaacccccttacctta 16212103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 16 - 346
Target Start/End: Complemental strand, 11580997 - 11580661
Alignment:
Q  16 tcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaact 115  Q
    ||||| ||||||||||||||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||  |||     
T  11580997 tcaattcatgaatatgtatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatctaaca 11580898  T
Q  116 acaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatca 213  Q
    ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||    
T  11580897 acaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatca 11580798  T
Q  214 attcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat---caaaattcatacaacatttgaaaatttac-aaaat 309  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||| ||| |||||| ||    |||||||||||||||||||||||||||| |||||    
T  11580797 attcatgcatacaaacatattatcacagttggagcacgaatttagcaataattatccattatgcaaaaaattcatacaacatttgaaaatttacaaaaat 11580698  T
Q  310 gatgatgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||| ||||||||||||    
T  11580697 gatgatgattatgataaagactaatccccttacctta 11580661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 11 - 352
Target Start/End: Original strand, 3059966 - 3060309
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| ||   | ||||||||||| |||||||||||| ||||||     
T  3059966 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataactcaatc 3060065  T
Q  111 caactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 207  Q
     ||| ||||| |  |||| |||| |||||||  || |||||||| || || |||||| ||||||||| |||||| ||| | ||||||| |  |||| |||    
T  3060066 taacaacaacttaacaaaattca-ccatttgagcataattttcacaatttatcatttttacatatttgaacatgtaatttcaccaacagtattacaatta 3060164  T
Q  208 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaa 307  Q
    | ||||||| ||||||||||| |||| |||| |||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||    
T  3060165 tcatcaattaatgcatacaaatatattatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatataacatttgaaaatttacaaa 3060264  T
Q  308 atgatgatgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||    
T  3060265 atgatgatgattatgataaagacttacccccttaccttcattatc 3060309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 11 - 346
Target Start/End: Complemental strand, 13037277 - 13036938
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| ||||  ||  | ||||| ||||| |||||||||||| ||||||     
T  13037277 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatattcataacattaattgaacaagaatcataactcaatc 13037178  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | | ||||||||||||| ||||    
T  13037177 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgcaatttcatcaacaatcatacaattat 13037078  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 306  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||    
T  13037077 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaa 13036978  T
Q  307 aatgatgatgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||| | |||||||||||||||||||||    
T  13036977 aatgatgatgattatggtgaagactaacccccttacctta 13036938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 11 - 346
Target Start/End: Original strand, 36052667 - 36053003
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| |||||||| | || |||||||||| |||||||| |||| || | ||||||||||||| |||||||||| | ||||| |    
T  36052667 catcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccacaacatcaattgaacaagaatcaaatctcaaat 36052766  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     |||   ||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||| | ||||    
T  36052767 taac---aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaattttaccaacaatcatataattat 36052863  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 306  Q
     |||||||||||||||||||| |||||||| |||||||| |  |||||||||||||| |||||| ||   |||||||||||||||||||||| || ||||    
T  36052864 catcaattcatgcatacaaacgtatcatcacagttggagtataaatttagcaacaattatccattatacaaaaattcatacaacatttgaaatttcacaa 36052963  T
Q  307 aatgatgatgattatgataaagactaacccccttacctta 346  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  36052964 aatgatgatgattatgataaagactaacccccttacctta 36053003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 107 - 272
Target Start/End: Original strand, 11516324 - 11516490
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 205  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  11516324 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 11516423  T
Q  206 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11516424 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 11516490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 107 - 272
Target Start/End: Complemental strand, 15441730 - 15441564
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 205  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  15441730 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 15441631  T
Q  206 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15441630 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 15441564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 107 - 272
Target Start/End: Complemental strand, 30262295 - 30262129
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 205  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  30262295 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 30262196  T
Q  206 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  30262195 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 30262129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 11 - 272
Target Start/End: Complemental strand, 47481294 - 47481031
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| | |||||| ||||  | | | ||||||||||| |||||||||||| |||||||    
T  47481294 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaaaaacatcaattaagagcgataacatcaattgaacaagaatcataactcaatt 47481195  T
Q  111 caactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 207  Q
    |||| ||||| |  |||| |||| ||| |||  ||||||||||| ||||| |||||| ||||||||| |||||| ||| | || |||||||||||| |||    
T  47481194 caacaacaacttagcaaaattca-ccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaatta 47481096  T
Q  208 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    | ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| ||||||    
T  47481095 tcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatccat 47481031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 11 - 265
Target Start/End: Complemental strand, 18254098 - 18253842
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| |||| ||  | || |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| |    
T  18254098 catcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat 18253999  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| ||||    
T  18253998 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattat 18253899  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 265  Q
     ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  18253898 catcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaat 18253842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 11 - 271
Target Start/End: Original strand, 13321014 - 13321278
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| ||||||| || | ||||||   ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  13321014 catcatcaattcatgaatgtgcaaacccaagtcatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaatt 13321113  T
Q  111 caacta-caacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacact 205  Q
    |||| | |||| |  |||| |||| | |||  ||||||||| ||||||||  ||||| |||||| ||  ||||||| ||| | ||||||||||||||| |    
T  13321114 caacaatcaacttagcaaaattcaccaattgagcacaattt-cataacttgacatttatacatactttgaaacatgtaatttcaccaacaatcatacaat 13321212  T
Q  206 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca 271  Q
    ||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| |||||    
T  13321213 tatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatcca 13321278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 11 - 254
Target Start/End: Complemental strand, 16479213 - 16478968
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| |||||||| |  |||||||||||| |||||||| | || || ||| |||||||||||  ||||||||| | ||||| |    
T  16479213 catcatcaatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaat 16479114  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||  | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| ||||    
T  16479113 taaaaataacttaacaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattat 16479014  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaat 254  Q
     ||||||||||||||||||||||| ||||  |||  ||||||||||    
T  16479013 catcaattcatgcatacaaacataacatcgcagtaagagcacgaat 16478968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 140 - 272
Target Start/End: Complemental strand, 25292470 - 25292338
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 239  Q
    ||||||| |||||| ||| || ||| |||||||||||||||| ||| | ||||||||||||||| | || | |||||||| |||||||||||||||||||    
T  25292470 gcacaatattcatagcttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatacatacaaacatatcatcaa 25292371  T
Q  240 agttggagcacgaatttagcaacaatcatccat 272  Q
    ||||||||||| |||||||||||||| ||||||    
T  25292370 agttggagcacaaatttagcaacaattatccat 25292338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 140 - 256
Target Start/End: Original strand, 13572808 - 13572924
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 239  Q
    ||||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||||||| ||| | || ||||||||||||||||||||||| |||||     
T  13572808 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcacacaatcatcatcaattcatgcatacaaacataacatcac 13572907  T
Q  240 agttggagcacgaattt 256  Q
    ||   ||||||||||||    
T  13572908 agcaagagcacgaattt 13572924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 144 - 344
Target Start/End: Complemental strand, 296094 - 295893
Alignment:
Q  144 aattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagtt 243  Q
    |||||| |||||||||||||| |||||| || |||||| ||| | |||||||||||||   |||| ||| ||||||||| ||||||||| || |  | ||    
T  296094 aatttttataacttctcatttttacataattcaacatgaaatttcaccaacaatcataacattatcatcgattcatgcacacaaacataacacctcaatt 295995  T
Q  244 ggagcacgaatttagcaacaatcatccataat-caaaa-ttcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctta 341  Q
     || |||||||||||||||||| || ||| || ||||| |||||||||  |||||||||  | ||||||||||  |||||| | ||||| ||||||||||    
T  295994 agaacacgaatttagcaacaattattcattatgcaaaatttcatacaaagtttgaaaatgca-aaaatgatgagaattatgttgaagacaaaccccctta 295896  T
Q  342 cct 344  Q
    |||    
T  295895 cct 295893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 10989541 - 10989661
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 239  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  10989541 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 10989640  T
Q  240 agttggagcacgaatttagca 260  Q
    ||   ||||||||||||||||    
T  10989641 agcaagagcacgaatttagca 10989661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 261
Target Start/End: Original strand, 2437590 - 2437710
Alignment:
Q  141 cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaa 240  Q
    |||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| ||||| |    
T  2437590 cacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcaca 2437689  T
Q  241 gttggagcacgaatttagcaa 261  Q
        |||||||||||||||||    
T  2437690 acaagagcacgaatttagcaa 2437710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 260
Target Start/End: Complemental strand, 13911136 - 13911024
Alignment:
Q  148 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 247  Q
    |||||||||| |||||| | ||||| | |||||| ||| | ||||||||||||||| |||  ||||||||||||||||||||||| ||||| |    |||    
T  13911136 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaattaacatcaattcatgcatacaaacataacatcacaacaagag 13911037  T
Q  248 cacgaatttagca 260  Q
    |||||||||||||    
T  13911036 cacgaatttagca 13911024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 230 - 272
Target Start/End: Complemental strand, 14114031 - 14113989
Alignment:
Q  230 atatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  14114031 atatcatcaaagttggagcacgaatttagcaacaattatccat 14113989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 230 - 272
Target Start/End: Complemental strand, 14423681 - 14423639
Alignment:
Q  230 atatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  14423681 atatcatcaaagttggagcacgaatttagcaacaattatccat 14423639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 346
Target Start/End: Original strand, 36024372 - 36024485
Alignment:
Q  240 agttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaa 333  Q
    ||||||||||||||||||| |||||| |||||  ||   ||||||||||| ||||||||||| ||  |||    ||||||||||||||||| ||||||||    
T  36024372 agttggagcacgaatttagaaacaattatccaattatgaaaaattcataccacatttgaaaaattgtaaaaatgatgatgatgattatgatgaagactaa 36024471  T
Q  334 -cccccttacctta 346  Q
     |||||||||||||    
T  36024472 ccccccttacctta 36024485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 126738 - 126776
Alignment:
Q  314 atgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  126738 atgattatgataaaaactaacccccttaccttaattatc 126776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 32493978 - 32493940
Alignment:
Q  314 atgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  32493978 atgattatgataaaaactaacccccttaccttaattatc 32493940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 2029244 - 2029276
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  2029244 atgattatgataaagactaacccccttacctta 2029276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 7293333 - 7293365
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  7293333 atgattatgataaagactaacccccttacctta 7293365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 11516544 - 11516576
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  11516544 atgattatgataaagactaacccccttacctta 11516576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 14113935 - 14113903
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  14113935 atgattatgataaagactaacccccttacctta 14113903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 15441510 - 15441478
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  15441510 atgattatgataaagactaacccccttacctta 15441478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 346
Target Start/End: Original strand, 15709428 - 15709501
Alignment:
Q  277 aaaattcatacaacatttgaaaatttacaaaat----gatgatgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| ||||||||||| || ||||||    ||||||||||||||| |||||||| || |||||||||    
T  15709428 aaaattcataccacatttgaaaaattgcaaaattgatgatgatgattatgatgaagactaatcctcttacctta 15709501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 30262075 - 30262043
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  30262075 atgattatgataaagactaacccccttacctta 30262043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 42056220 - 42056188
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  42056220 atgattatgataaagactaacccccttacctta 42056188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 111201 - 111163
Alignment:
Q  314 atgattatgataaagactaacccccttaccttaattatc 352  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  111201 atgattatgatgaaaactaacccccttaccttaattatc 111163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 1936949 - 1936911
Alignment:
Q  314 atgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  1936949 atgattatgataaaaactaacctccttaccttaattatc 1936911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 352
Target Start/End: Complemental strand, 7283987 - 7283950
Alignment:
Q  315 tgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||| || ||||||||||||||||||||||||    
T  7283987 tgattatgatgaaaactaacccccttaccttaattatc 7283950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 371417 - 371449
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  371417 atgattatgatgaagactaacccccttacctta 371449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 3049905 - 3049937
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||| ||||||||||||||||||    
T  3049905 atgattatgataaaaactaacccccttacctta 3049937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 13321334 - 13321366
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  13321334 atgattatgatgaagactaacccccttacctta 13321366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 342
Target Start/End: Complemental strand, 15516793 - 15516765
Alignment:
Q  314 atgattatgataaagactaacccccttac 342  Q
    |||||||||||||||||||||||||||||    
T  15516793 atgattatgataaagactaacccccttac 15516765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 25124450 - 25124482
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  25124450 atgattatgatgaagactaacccccttacctta 25124482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 47480976 - 47480944
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  47480976 atgattatgatgaagactaacccccttacctta 47480944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 180; Significance: 4e-97; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 11 - 352
Target Start/End: Original strand, 41394222 - 41394565
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| |||||||| |  |||||||||||| |||||||| | || || ||| |||||||||||  ||||||||| | |||||      
T  41394222 catcatcaatccatgaatatgcatacccaatcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaca 41394321  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||| | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||  | ||||||||||||||| ||||    
T  41394322 taacaataacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaacttcaccaacaatcatacaattat 41394421  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 308  Q
     ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41394422 catcaatttatgcatacaaacatatcatcatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 41394521  T
Q  309 tgatgatgattatgataaagactaacccccttaccttaattatc 352  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  41394522 tgatgatgattatgataaagactaacccccttaccttaattatc 41394565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 11 - 346
Target Start/End: Original strand, 20931345 - 20931682
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||| ||| |||||||||| ||||||||   || |||||||||| |||||||| |||| || | | ||||||||||| |||||||||| | ||||| |    
T  20931345 catcattaattcatgaatatgcatacccaagaaattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaat 20931444  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||| ||||  |  |||| |||| | |||| |||||||||||||||||| |||||| ||||||| | |||||| ||| | |||||||||| |||| ||||    
T  20931445 taacaacaatttagcaaaattcaccaatttagcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattat 20931544  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 308  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||| ||||||||||| |||||||||| |||||    
T  20931545 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaacttcatacaacaattgaaaatttgcaaaa 20931644  T
Q  309 tgatgatgattatgataaagactaacccccttacctta 346  Q
    ||| |||||||||||||||| |||||||||||||||||    
T  20931645 tgaggatgattatgataaaggctaacccccttacctta 20931682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 11 - 346
Target Start/End: Original strand, 20445679 - 20446019
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||| ||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |||||||||||  ||||||||||| | |||||    
T  20445679 catcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagccataacatcaattgatcaagaatcataacacaatt 20445778  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
    |||| ||||| |  |||| |||| | |||  ||||||||||||  |||| |||||| | | || || |||||| ||| | ||||||||||||||| ||||    
T  20445779 caacaacaacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaattat 20445878  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaattt-aca 305  Q
     ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||| |||    
T  20445879 catcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttcaca 20445978  T
Q  306 aaatgatgatgattatgataaagactaacccccttacctta 346  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  20445979 aaatgatgatgattatgataaagactaactcccttacctta 20446019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 11 - 346
Target Start/End: Complemental strand, 20893889 - 20893551
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||  ||||||||| |||||||||| ||||||||||||| |||||||| |||| ||   | ||||||||||| ||||||||||||  |||||     
T  20893889 catcatcaatttatgaatatgcatacccaaacaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataaatcaatc 20893790  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | | ||||||||||||| ||||    
T  20893789 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaacaacaatcatacaattat 20893690  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 306  Q
     ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| ||   ||||||||||||||||||||||| ||||||    
T  20893689 catcaattcatgcatacaaacatatcatcacagttggagcaagaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaa-ttacaa 20893591  T
Q  307 aatgatgatgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  20893590 aatgatgatgattatgatgaagactaacccccttacctta 20893551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 11 - 346
Target Start/End: Original strand, 20913037 - 20913367
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| |||||||| | || |||||||||| |||| ||| |||| || | | ||||||||||| ||||||||||      ||||    
T  20913037 catcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaagatcaattaacaaccataacatcaattgaacaagaatca------aatt 20913130  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||||||||| |||||| ||||||| | |||||| ||| | |||||||||| |||| ||||    
T  20913131 -aacaacaactttgcaaaattcaccaattgagcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattat 20913229  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 308  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||||||| |||||    
T  20913230 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccgtaagcaaaattcatacaacaattgaaaatttgcaaaa 20913329  T
Q  309 tgatgatgattatgataaagactaacccccttacctta 346  Q
    ||| |||||||| |||||||||||||||||||||||||    
T  20913330 tgaggatgattacgataaagactaacccccttacctta 20913367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 11 - 346
Target Start/End: Complemental strand, 37844714 - 37844374
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||| ||||| |||||||||| |||||||| | |||| |||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||     
T  37844714 catcctcaattcatgaatatgcatacccaagcaatgactcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataactcaatc 37844615  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttca-taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 207  Q
     ||| ||||| |  |||| |||||  |||  |||||||||||| ||  || |||||| | | || || |||||| ||| | ||||||||||||||| |||    
T  37844614 taacaacaacttagcaaaattcattaattgagcacaattttcactattttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaatta 37844515  T
Q  208 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttaca 305  Q
    | ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| ||   ||||||||||||||||||||||||| |||    
T  37844514 tcatcaattcatgcatacaaacatatcatcatagttggagcatgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcaca 37844415  T
Q  306 aaatgatgatgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  37844414 aaatgatgatgattatgataaagactaacccccttacctta 37844374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 11 - 346
Target Start/End: Original strand, 20531444 - 20531783
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||| ||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |||||||||||  ||||||||||| | |||||    
T  20531444 catcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagccataacatcaattgatcaagaatcataacacaatt 20531543  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
    |||| ||||| |  |||| |||| | |||  ||||||||||||  |||| |||||| | | || || |||||| ||| | ||||||||||||||| ||||    
T  20531544 caacaacaacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaattat 20531643  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 306  Q
     |||||||||||||||||||||||| |||| | |||||||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||| ||||    
T  20531644 catcaattcatgcatacaaacatattatcacatttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcacaa 20531743  T
Q  307 aatgatgatgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||   ||||||||||    
T  20531744 aatgatgatgattatgataaagactaatttccttacctta 20531783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 107 - 272
Target Start/End: Original strand, 51452589 - 51452755
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 205  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  51452589 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 51452688  T
Q  206 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  51452689 tattatcaattcatgcatacaaacatatcatcaaagttgaagcacgaatttagcaacaattatccat 51452755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 345
Target Start/End: Original strand, 22227809 - 22228146
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| | |||||| | || |||||||||  | |||||| |||| |||  | ||||||||||| |||||||||| | ||||| |    
T  22227809 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaat 22227908  T
Q  111 caactacaacatgtcaaa-ttcatccatttg-cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||| ||||| |  |||| |||| | ||| | ||||||||||||||||| |||||| ||||||||| |||||| ||| | || |||||||||||| ||||    
T  22227909 taacaacaacttagcaaaattcaacaattggacacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattat 22228008  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaa 307  Q
     ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||| |||  | ||| || | |  ||||||||||||  ||||||  | |||    
T  22228009 catcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 22228108  T
Q  308 atgatgatgattatgataaagactaacccccttacctt 345  Q
     ||   |||||||||||||  |||||||||||||||||    
T  22228109 ttgtacatgattatgataataactaacccccttacctt 22228146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 345
Target Start/End: Original strand, 22232506 - 22232843
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| | |||||| | || |||||||||  | |||||| |||| |||  | ||||||||||| |||||||||| | ||||| |    
T  22232506 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaat 22232605  T
Q  111 caactacaacatgtcaaa-ttcatccatttg-cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||| ||||| |  |||| |||| | ||| | ||||||||||||||||| |||||| ||||||||| |||||| ||| | || |||||||||||| ||||    
T  22232606 taacaacaacttagcaaaattcaacaattggacacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattat 22232705  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaa 307  Q
     ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||| |||  | ||| || | |  ||||||||||||  ||||||  | |||    
T  22232706 catcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 22232805  T
Q  308 atgatgatgattatgataaagactaacccccttacctt 345  Q
     ||   |||||||||||||  |||||||||||||||||    
T  22232806 ttgtacatgattatgataataactaacccccttacctt 22232843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 260
Target Start/End: Original strand, 2116258 - 2116506
Alignment:
Q  15 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagc-tcaattcaa 113  Q
    |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |||||||||||  ||||||||| |   |||| | ||    
T  2116258 atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaaatatcaaattaa 2116357  T
Q  114 ctacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattat 211  Q
    | | ||| |  |||| |||| | |||  |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||    
T  2116358 caataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcat 2116457  T
Q  212 caattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 260  Q
    ||||||||||||||||||||| ||||| |||   ||||||||| |||||    
T  2116458 caattcatgcatacaaacataacatcacagtaaaagcacgaatctagca 2116506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 140 - 347
Target Start/End: Original strand, 45051554 - 45051759
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 239  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||| || |||||     
T  45051554 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcac 45051653  T
Q  240 agttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 338  Q
    |||  || ||||||| |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||||| |  |||||||||||||||||||||||||    
T  45051654 agtaagaacacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaaaatca-catgattatgataaagactaaccccc 45051750  T
Q  339 ttaccttaa 347  Q
    |||||||||    
T  45051751 ttaccttaa 45051759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 5072508 - 5072388
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 239  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||| ||||||| |||||     
T  5072508 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatataaacataacatcac 5072409  T
Q  240 agttggagcacgaatttagca 260  Q
    ||   ||||||||||||||||    
T  5072408 agcaagagcacgaatttagca 5072388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 18601238 - 18601118
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 239  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  18601238 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 18601139  T
Q  240 agttggagcacgaatttagca 260  Q
    ||   ||||| ||||||||||    
T  18601138 agcaagagcatgaatttagca 18601118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 21860334 - 21860372
Alignment:
Q  314 atgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  21860334 atgattatgataaaaactaacccccttaccttaattatc 21860372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 44034903 - 44034865
Alignment:
Q  314 atgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  44034903 atgattatgataaaaactaacccccttaccttaattatc 44034865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 314 - 345
Target Start/End: Complemental strand, 15861358 - 15861327
Alignment:
Q  314 atgattatgataaagactaacccccttacctt 345  Q
    ||||||||||||||||||||||||||||||||    
T  15861358 atgattatgataaagactaacccccttacctt 15861327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 256
Target Start/End: Complemental strand, 22143402 - 22143361
Alignment:
Q  215 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 256  Q
    |||||||||||||||| ||||||| |||| ||||||||||||    
T  22143402 ttcatgcatacaaacacatcatcatagttagagcacgaattt 22143361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 27675086 - 27675156
Alignment:
Q  280 attcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||||| |||||||||||||  |  |  | ||||||||||||  |||||||||||||||||||||||    
T  27675086 attcatacaacaattgaaaatttacactaaaa--acgattatgataaattctaacccccttaccttaattatc 27675156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 51452809 - 51452841
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||| |||||||||||||||||||||||||    
T  51452809 atgattaagataaagactaacccccttacctta 51452841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 174; Significance: 1e-93; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 11 - 346
Target Start/End: Complemental strand, 36982704 - 36982364
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| |||||||||| ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  36982704 catcatcaattcatgaatatgcatacccaaacaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacaggaatcataactcaatt 36982605  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
    |||| ||||| || |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||| ||||| |||| ||||    
T  36982604 caacaacaacttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccagcaatcttacaattat 36982505  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-a 305  Q
     ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||||| |    
T  36982504 catcaattcatgaatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaa 36982405  T
Q  306 aaatgatgatgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36982404 aaatgatgatgattatgataaagactaacccccttacctta 36982364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 16 - 346
Target Start/End: Original strand, 462743 - 463075
Alignment:
Q  16 tcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaact 115  Q
    ||||| |||||||||| |||||||| | ||||||||||||  || ||||| |||| || | | ||||||||||| |||||||||||| ||||||  |||     
T  462743 tcaattcatgaatatgcatacccaagcaatgattcatcaatcacgacatcaattaacagccataacatcaattgaacaagaatcataactcaatctaaca 462842  T
Q  116 acaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc 212  Q
    ||||| |  |||| |||| ||| |||  ||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| |||    
T  462843 acaacttagcaaaattca-ccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatc 462941  T
Q  213 aattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgat 312  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  462942 aattcatgcatacaaatatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgat 463041  T
Q  313 gatgattatgataaagactaacccccttacctta 346  Q
    ||||||||||||||||||||||||||||||||||    
T  463042 gatgattatgataaagactaacccccttacctta 463075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 11 - 352
Target Start/End: Complemental strand, 19794967 - 19794623
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| |||||||| | ||||||||||||||| |||||| |||| |   || ||||||||||| |||||||||||| |||||||    
T  19794967 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactataacatcaattaacggaaataacatcaattgaacaagaatcataactcaatt 19794868  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| ||||    
T  19794867 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattat 19794768  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 306  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| | ||||| |||||| ||   ||||||||||||||||||| ||||||||||    
T  19794767 tatcaattcatgcatacaaacatatcatcacagttggagcacgaatttaacgacaattatccattatgcaaaaattcatacaacatttg-aaatttacaa 19794669  T
Q  307 aatgatgatgattatgataaagactaacccccttaccttaattatc 352  Q
    ||| |||||||||||||| |||||||||||||||||||||||||||    
T  19794668 aataatgatgattatgatgaagactaacccccttaccttaattatc 19794623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 11 - 346
Target Start/End: Original strand, 8891242 - 8891581
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| ||||  | | | ||||||||||| |||||||||||| ||||||     
T  8891242 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagccataacatcaattgaacaagaatcataactcaatc 8891341  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| |  |||||||||||||| ||||    
T  8891342 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcgccaacaatcatacaattat 8891441  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 306  Q
     |||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||    
T  8891442 catcaattcatgcatacaaacatattatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaa 8891541  T
Q  307 aatgatgatgattatgataaagactaacccccttacctta 346  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  8891542 aatgatgatgattatgataaagactaacccctttacctta 8891581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 11 - 352
Target Start/End: Complemental strand, 43643220 - 43642875
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| |||||||| |  ||||||||||||||||||||| |||| || ||| | ||||||||| |||||||||||| ||||| |    
T  43643220 catcatcaattcatgaatatgcatacccaagcagtgattcatcaactacaacatcaattaacagcaatagcatcaattgaacaagaatcatatctcaaat 43643121  T
Q  111 caactacaac-atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||  ||||| | |  ||||||| | |||  |||||||||||| |||||  ||||| | | ||||| |||||| ||| | ||||||||||||||| ||||    
T  43643120 taataacaactaagaaaaattcaccaattgagcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattat 43643021  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 306  Q
     ||||||||||||||||||||||||||||| | ||||||||| |||||||||||||| |||||  ||   ||||||||||||||||||||||||| ||||    
T  43643020 catcaattcatgcatacaaacatatcatcacaattggagcacaaatttagcaacaattatccactatgcaaaaattcatacaacatttgaaaattcacaa 43642921  T
Q  307 aatgatgatgattatgataaagactaacccccttaccttaattatc 352  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||    
T  43642920 aatgatgatgattatgataaagactaacctccttcccttaattatc 43642875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 11 - 352
Target Start/End: Complemental strand, 20627576 - 20627232
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||| ||||| |||||||||  |||||||| | ||||||||||||| |||||| | |||| || | | || |||||||| |||||||| | | ||||| |    
T  20627576 catcctcaattcatgaatatccatacccaagcaatgattcatcaaccacaacaccaattaacaaccataaaatcaattgaacaagaattaaatctcaaat 20627477  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| || || |||||| |||||||||  ||||| ||| | ||||||||||||||| ||||    
T  20627476 taacaacaacttaacaaaattcaccaattgagcacaattttcacaagttatcatttttacatatttggacatgtaatttcaccaacaatcatacaattat 20627377  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaa-tttacaaa 307  Q
     |||||||| |||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||| ||||||||||| ||||||||| ||||||||    
T  20627376 catcaattcgtgcatacaaacatatcatcacagttggagcacgaatttaacaacaattatccataatcataattcatacaatatttgaaaattttacaaa 20627277  T
Q  308 atgatgatgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  20627276 atgatgatgattatgataaagactaaccccgttaccttaattatc 20627232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 11 - 346
Target Start/End: Complemental strand, 24341652 - 24341309
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| ||||||||||||||||||| | |||||||||||||   |||||| |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  24341652 catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaggaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaatt 24341553  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||  ||| | ||||||||||||||| ||||    
T  24341552 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatataatttcaccaacaatcatacaattat 24341453  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaa 306  Q
     ||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || |||    
T  24341452 catcaattcatgcatacaaacatatcatcacagttgaagcatgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaa 24341353  T
Q  307 a----atgatgatgattatgataaagactaacccccttacctta 346  Q
    |    ||||||||||||||||| |||||||||||||||||||||    
T  24341352 aaatgatgatgatgattatgatgaagactaacccccttacctta 24341309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 107 - 272
Target Start/End: Complemental strand, 19689567 - 19689401
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 205  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  19689567 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 19689468  T
Q  206 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19689467 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 19689401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 107 - 272
Target Start/End: Original strand, 23820168 - 23820334
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 205  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  23820168 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 23820267  T
Q  206 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23820268 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 23820334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 107 - 272
Target Start/End: Complemental strand, 14906606 - 14906440
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 205  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  14906606 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 14906507  T
Q  206 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14906506 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 14906440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 107 - 272
Target Start/End: Original strand, 20015108 - 20015274
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 205  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||| ||| |    
T  20015108 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcacacaat 20015207  T
Q  206 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20015208 tattatcaattcatgcatgcaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 20015274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 11 - 272
Target Start/End: Complemental strand, 25265653 - 25265390
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| |||||||| | ||||||||| ||| |||||||| |||| || ||||||||||||||| ||| |  ||  | |  ||||    
T  25265653 catcatcaattcatgaatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataatt 25265554  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
    |||| |||||||  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| ||||    
T  25265553 caacaacaacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattat 25265454  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
     ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||    
T  25265453 catcaattcatgcatacaaacataacatcaaagttagagcacgaatttagcaacaattatccat 25265390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 140 - 272
Target Start/End: Complemental strand, 17396784 - 17396653
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 239  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| ||| | ||||||||||||||| | || | |||||||||||||| |||||||||||||    
T  17396784 gcacaatattcataacttatcatttttacttatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaa 17396686  T
Q  240 agttggagcacgaatttagcaacaatcatccat 272  Q
    |||||||||||||||||||||||||| ||||||    
T  17396685 agttggagcacgaatttagcaacaattatccat 17396653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 250 - 346
Target Start/End: Original strand, 22863169 - 22863267
Alignment:
Q  250 cgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||| |||||| ||   ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22863169 cgaatttagcaacaattatccattatgcaaaaattcatacaacaattgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 22863267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 222
Target Start/End: Complemental strand, 7508107 - 7507894
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgca-caagaatcatagctcaat 109  Q
    ||||||||||||||||||||| |||||||| |  |||||||||||| |||||||| | || || ||| ||||||||||  | || |||||||| ||||||    
T  7508107 catcatcaatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaat 7508008  T
Q  110 tcaactacaacat-gtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt 206  Q
    | ||| ||||| | | |||||||| ||| |||  ||||||||||||||||| | |||| ||||||||| |||||| ||| | ||||||||||||||| ||    
T  7508007 t-aacaacaacttagccaaattca-ccaattgaacacaattttcataacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaatt 7507910  T
Q  207 attatcaattcatgca 222  Q
    || |||||||||||||    
T  7507909 atcatcaattcatgca 7507894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 260
Target Start/End: Complemental strand, 19886913 - 19886661
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  19886913 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 19886814  T
Q  111 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 207  Q
     ||| ||||| |  |  ||||||| |  ||| ||||||| |||||||||| ||| || | ||||| | |||||| ||| | ||||||||| |||||  ||    
T  19886813 taacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaacta 19886714  T
Q  208 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 260  Q
      ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  19886713 acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 19886661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 22284278 - 22284316
Alignment:
Q  314 atgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22284278 atgattatgataaagactaacccccttaccttaattatc 22284316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 22275045 - 22275083
Alignment:
Q  314 atgattatgataaagactaacccccttaccttaattatc 352  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  22275045 atgattatgataaaggctaacccccttaccttaattatc 22275083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 352
Target Start/End: Original strand, 15633538 - 15633575
Alignment:
Q  315 tgattatgataaagactaacccccttaccttaattatc 352  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  15633538 tgattatgataaagactaacctccttaccttaattatc 15633575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 314 - 347
Target Start/End: Complemental strand, 19689347 - 19689314
Alignment:
Q  314 atgattatgataaagactaacccccttaccttaa 347  Q
    ||||||||||||||||||||||||||||||||||    
T  19689347 atgattatgataaagactaacccccttaccttaa 19689314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 9652828 - 9652796
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  9652828 atgattatgataaagactaacccccttacctta 9652796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 14906386 - 14906354
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  14906386 atgattatgataaagactaacccccttacctta 14906354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 23820388 - 23820420
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  23820388 atgattatgataaagactaacccccttacctta 23820420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 314 - 345
Target Start/End: Original strand, 25213372 - 25213403
Alignment:
Q  314 atgattatgataaagactaacccccttacctt 345  Q
    ||||||||||||||||||||||||||||||||    
T  25213372 atgattatgataaagactaacccccttacctt 25213403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 7507789 - 7507757
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  7507789 atgattatgatgaagactaacccccttacctta 7507757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 9636761 - 9636821
Alignment:
Q  28 tatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaatt 88  Q
    |||| |||||||||| |||| |||||||| |||| |||| ||| || ||||||||||||||    
T  9636761 tatgaatacccaaactatgaatcatcaacaacaatatctcttaacaacaacaacatcaatt 9636821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 17396599 - 17396567
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||| |||||||||||||||||||||||    
T  17396599 atgattatggtaaagactaacccccttacctta 17396567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 20015328 - 20015360
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||| |||||||||||||||||||||||||||    
T  20015328 atgatcatgataaagactaacccccttacctta 20015360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 24884718 - 24884762
Alignment:
Q  44 atgattcatcaactacaacatctattagcatcaacaacatcaatt 88  Q
    |||| |||||||| |||| ||||||||||| ||||||||||||||    
T  24884718 atgaatcatcaacaacaatatctattagcaacaacaacatcaatt 24884762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 28031166 - 28031134
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  28031166 atgattatgatgaagactaacccccttacctta 28031134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 346
Target Start/End: Complemental strand, 31146138 - 31146073
Alignment:
Q  280 attcatacaaca-tttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 346  Q
    |||||||||||| |||||||||||||| ||  | |||||||||||| ||  |||||||||||||||||    
T  31146138 attcatacaacaatttgaaaatttacacaa--aagatgattatgatgaattctaacccccttacctta 31146073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 33128372 - 33128404
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  33128372 atgattatgatgaagactaacccccttacctta 33128404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 170; Significance: 3e-91; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 11 - 346
Target Start/End: Original strand, 48598 - 48935
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| ||||  | | | ||||||||||| |||||||||||| ||||||     
T  48598 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagccataacatcaattgaacaagaatcataactcaatc 48697  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     | | ||||| |  |||| |||| | | |  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| ||||    
T  48698 tagcaacaacttagcaaaattcaccaactgagcacaattttcacaacttatcattttttcctatttgaacatgtaatttcaccaacaatcatacaattat 48797  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 308  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  48798 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaa 48897  T
Q  309 tgatgatgattatgataaagactaacccccttacctta 346  Q
    ||||||||||||||||||||||||||||||||||||||    
T  48898 tgatgatgattatgataaagactaacccccttacctta 48935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 36225 - 36323
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 238  Q
    ||||||| |||||||||| |||||| | ||||| | || ||| ||| | |||||||||||||||  ||  |||||||||| |||||||||||| |||||    
T  36225 gcacaatcttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatacatacaaacataacatca 36323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 61154 - 61122
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  61154 atgattatgatgaagactaacccccttacctta 61122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 167; Significance: 2e-89; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 11 - 346
Target Start/End: Original strand, 1124 - 1462
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| | |||||| | || |||||||||| |||| ||| |||| || | | ||||||||||| |||||||||| | ||||| |    
T  1124 catcatcaattcatgaatatgcacacccaagcaattattcatcaaccacaatatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaat 1223  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| ||||    
T  1224 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattat 1323  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaa 307  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| |||||    
T  1324 tatcaattcatgcatactaacatatcatcaaagttggagcacgaatttagcaacaattatccataagaaaaattcatacaacatttgaaaatttcacaaa 1423  T
Q  308 atgatgatgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1424 atgatgatgattatgataaagactaacccccttacctta 1462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 13 - 346
Target Start/End: Complemental strand, 3843 - 3508
Alignment:
Q  13 tcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattca 112  Q
    |||||||||||| |||||| |||||||| | || |||| ||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| | |    
T  3843 tcatcaatccatcaatatgcatacccaagcaattattcctcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaatta 3744  T
Q  113 actacaacatgtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatta 210  Q
    || ||||| |  |||| |   ||| |||  ||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |    
T  3743 acaacaacttagcaaaatttaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatca 3644  T
Q  211 tcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatg 310  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||    
T  3643 tcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatctataatcaaaattcatacaacttttgaaaatttacaaaatg 3544  T
Q  311 atgatgattatgataaagactaacccccttacctta 346  Q
    | ||||||||||| ||||||||||||||||||||||    
T  3543 aagatgattatgacaaagactaacccccttacctta 3508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 163; Significance: 5e-87; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 11 - 343
Target Start/End: Original strand, 19206 - 19543
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  19206 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacaggaatcataactcaatt 19305  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| ||||    
T  19306 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattat 19405  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-a 305  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||||| |    
T  19406 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaa 19505  T
Q  306 aaatgatgatgattatgataaagactaacccccttacc 343  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  19506 aaattatgatgattatgatgaagactaacccccttacc 19543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 11 - 272
Target Start/End: Original strand, 21290 - 21553
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  21290 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacaggaatcataactcaatt 21389  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| ||||    
T  21390 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattat 21489  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  21490 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccat 21553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 163; Significance: 5e-87; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 22 - 346
Target Start/End: Original strand, 171916 - 172242
Alignment:
Q  22 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 121  Q
    |||||||||| ||||| || | ||||||||||||| |||||||| |||| || | | ||||||||||| ||||||||| || ||||||||||| |||||     
T  171916 catgaatatgcatacctaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaact 172015  T
Q  122 tgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 219  Q
    |  |||| |||| | |||| |||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||| |||||||||| |||| ||||||||||    
T  172016 tagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcat 172115  T
Q  220 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgatt 319  Q
     |||||||||||||||||| |||||||||||| ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  172116 ccatacaaacatatcatcacagttggagcacgtatttagcaacagttatccataatcaaaatttatacaacatttgaaaatttacaaaatgatgatgatt 172215  T
Q  320 atgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||    
T  172216 atgataaagactaacccccttacctta 172242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 22 - 346
Target Start/End: Original strand, 177619 - 177945
Alignment:
Q  22 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 121  Q
    |||||||||| ||||| || | ||||||||||||| |||||||| |||| || | | ||||||||||| ||||||||| || ||||||||||| |||||     
T  177619 catgaatatgcatacctaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaact 177718  T
Q  122 tgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 219  Q
    |  |||| |||| | |||| |||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||| |||||||||| |||| ||||||||||    
T  177719 tagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcat 177818  T
Q  220 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgatt 319  Q
     |||||||||||||||||| |||||||||||| ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  177819 ccatacaaacatatcatcacagttggagcacgtatttagcaacagttatccataatcaaaatttatacaacatttgaaaatttacaaaatgatgatgatt 177918  T
Q  320 atgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||    
T  177919 atgataaagactaacccccttacctta 177945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 158; Significance: 5e-84; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 11 - 347
Target Start/End: Complemental strand, 37176 - 36836
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||| ||||||| |||||| ||||| ||||||     
T  37176 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacgtcaattgaacaagattcataactcaatc 37077  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
    |||| ||||| |  |||| |||| | |||| |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||| | |||| ||||    
T  37076 caaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaagcttacaattat 36977  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 306  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||| ||   |||||||||||||||||||||| || ||||    
T  36976 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaatttcacaa 36877  T
Q  307 aatgatgatgattatgataaagactaacccccttaccttaa 347  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36876 aatgatgatgattatgataaagactaacccccttaccttaa 36836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 158; Significance: 5e-84; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 11 - 346
Target Start/End: Original strand, 23506965 - 23507302
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| |||||||| | || |||||||||| |||||||| |||| || | | ||||||||||| |||||||||| | ||||| |    
T  23506965 catcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaat 23507064  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| ||||    
T  23507065 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattat 23507164  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 308  Q
     ||||||||||||||||||||||||||||| |  ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||  ||||||||    
T  23507165 catcaattcatgcatacaaacatatcatcacaaatggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaatcttacaaaa 23507264  T
Q  309 tgatgatgattatgataaagactaacccccttacctta 346  Q
    ||  ||||||||||||||||||||||||||||||||||    
T  23507265 tggagatgattatgataaagactaacccccttacctta 23507302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 11 - 346
Target Start/End: Complemental strand, 27182810 - 27182471
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| |||| ||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||     
T  27182810 catcatcaattcatgaatatgcatactcaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatc 27182711  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | | ||||||||||||| ||||    
T  27182710 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcatcaacaatcatacaattat 27182611  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 306  Q
     |||| |||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||    
T  27182610 catcagttcatgcatacaaacatatcatcacagttggagcatgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaa 27182511  T
Q  307 aatgatgatgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  27182510 aatgatgatgattatgatgaagactaacccccttacctta 27182471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 11 - 346
Target Start/End: Complemental strand, 18531330 - 18530988
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| ||||||||||||||||| | | ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  18531330 catcatcaattcatgaatatgtatacccgagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacatgaatcatatctcaatt 18531231  T
Q  111 caactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 207  Q
    |||| ||||| |  |||| |||| ||| |||  ||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||    
T  18531230 caacaacaacttagcaaaattca-ccaattgaacacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaatta 18531132  T
Q  208 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcc-ataatcaaa-attcatacaacatttgaaaatttaca 305  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| || || ||| |||||||| ||||||||||| || ||    
T  18531131 tcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaacattcataccacatttgaaaaattgca 18531032  T
Q  306 aaatgatgat---gattatgataaagactaacccccttacctta 346  Q
    ||||||||||   ||||||||| |||||||||||||||||||||    
T  18531031 aaatgatgatgacgattatgatgaagactaacccccttacctta 18530988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 11 - 346
Target Start/End: Complemental strand, 22054096 - 22053753
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||||| |||||| | ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| |||||||    
T  22054096 catcatcaattcatgaatatgtagacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacatgaatcatatctcaatt 22053997  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | |||||||||||||||  |||    
T  22053996 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaactat 22053897  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaa 306  Q
     |||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || |||    
T  22053896 catcaattcatacatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaatttcaa 22053797  T
Q  307 a----atgatgatgattatgataaagactaacccccttacctta 346  Q
    |    ||||||||||||||||| |||||||||||||||||||||    
T  22053796 aaatgatgatgatgattatgatgaagactaacccccttacctta 22053753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 107 - 272
Target Start/End: Original strand, 20623066 - 20623232
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 205  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  20623066 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 20623165  T
Q  206 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20623166 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 20623232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 107 - 272
Target Start/End: Complemental strand, 21233694 - 21233528
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 205  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  21233694 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 21233595  T
Q  206 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21233594 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 21233528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 110 - 272
Target Start/End: Original strand, 37052844 - 37053007
Alignment:
Q  110 tcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| ||| ||||||||||||||||| ||||    
T  37052844 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcatttccacatattcaaacatgtaatttaaccaacaatcatacaattat 37052943  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37052944 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 37053007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 107 - 272
Target Start/End: Original strand, 16536294 - 16536460
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 205  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  16536294 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 16536393  T
Q  206 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16536394 tattataaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 16536460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 107 - 270
Target Start/End: Complemental strand, 25900571 - 25900408
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 205  Q
    |||||||| |||||||||||| ||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||  ||| ||||||||||||||||| |    
T  25900571 aattcaacaacaacatgtcaa-ttcatccattttgcacaattttcataacttttcattttcacatattcaaacatataatttaaccaacaatcatacaat 25900473  T
Q  206 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcc 270  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25900472 tatcatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatcc 25900408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 22 - 272
Target Start/End: Original strand, 34939289 - 34939540
Alignment:
Q  22 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 121  Q
    |||||||||| |||||||| |  |||||||||||| |||||||| |||| || ||| |||||||| || |||||||||||| ||||||||| | |  ||     
T  34939289 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacagcaataacatcaactgaacaagaatcataactcaattca-caatgact 34939387  T
Q  122 tgtcaaattc-atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 219  Q
    |  |||| || ||| |||  ||||||||||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| ||||||||||    
T  34939388 tagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcat 34939487  T
Q  220 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||| | ||||||    
T  34939488 gcatacaaacataacatcacagttagagcacgaatttagcaacagttatccat 34939540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 29188404 - 29188284
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 239  Q
    |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||     
T  29188404 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 29188305  T
Q  240 agttggagcacgaatttagca 260  Q
    |||  |||||||||| |||||    
T  29188304 agtaagagcacgaatctagca 29188284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 256
Target Start/End: Original strand, 27009975 - 27010089
Alignment:
Q  142 acaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaag 241  Q
    ||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||| ||||||| | || ||||||||||||||||||||||| ||||| ||    
T  27009975 acaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacactcatacaatcatcatcaattcatgcatacaaacataacatcacag 27010074  T
Q  242 ttggagcacgaattt 256  Q
       ||||||||||||    
T  27010075 caagagcacgaattt 27010089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 260
Target Start/End: Complemental strand, 4200237 - 4199985
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||| ||||||||||| | |||||| | || |||||||||  | || ||| | || |||  | ||||||||||| ||| |||||| | ||||| |    
T  4200237 catcatcaacccatgaatatgcaaacccaagcaatcattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 4200138  T
Q  111 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 207  Q
    |||| |||||||  |  ||||||| | |||| ||| ||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||    
T  4200137 caacaacaacataagagaaattcaccaatttagcataatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaacta 4200038  T
Q  208 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 260  Q
      ||||||||||||||||||||||| ||||| |    ||||||||||||||||    
T  4200037 acatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagca 4199985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 260
Target Start/End: Complemental strand, 22366733 - 22366481
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| ||||| |||| | ||||| |    
T  22366733 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagcatcacaactcaaat 22366634  T
Q  111 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 207  Q
     ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||    
T  22366633 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 22366534  T
Q  208 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 260  Q
      ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  22366533 acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 22366481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 260
Target Start/End: Original strand, 25426628 - 25426880
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  25426628 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 25426727  T
Q  111 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 207  Q
     ||| ||||| |  |  ||||||| |  ||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||    
T  25426728 taacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 25426827  T
Q  208 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 260  Q
      ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  25426828 acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 25426880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 11 - 257
Target Start/End: Complemental strand, 18778244 - 18777995
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | ||  ||  | ||||||| ||| |||||||||| | ||||| |    
T  18778244 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataatattcataacatcatttgaacaagaatcacaactcaaat 18778145  T
Q  111 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 207  Q
     ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||    
T  18778144 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 18778045  T
Q  208 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaattta 257  Q
      ||||||||||||||||||||||| ||||| ||   |||||||||||||    
T  18778044 acatcaattcatgcatacaaacataacatcacagcaagagcacgaattta 18777995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 260
Target Start/End: Original strand, 12374 - 12626
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  12374 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 12473  T
Q  111 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 207  Q
     ||| ||||| |  |  ||||||| |  ||| ||||||| |||||||||| ||| || | ||||| | |||||| ||| | ||||||||| |||||  ||    
T  12474 taacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaacta 12573  T
Q  208 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 260  Q
      ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  12574 acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 12626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 140 - 257
Target Start/End: Complemental strand, 43443515 - 43443398
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 239  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  43443515 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 43443416  T
Q  240 agttggagcacgaattta 257  Q
    ||   |||||||||||||    
T  43443415 agcaagagcacgaattta 43443398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 19500031 - 19500151
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 239  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  ||||||||||||||||||||||| |||||     
T  19500031 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 19500130  T
Q  240 agttggagcacgaatttagca 260  Q
    ||   ||||||||||||||||    
T  19500131 agcaagagcacgaatttagca 19500151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 260
Target Start/End: Complemental strand, 21073847 - 21073595
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  21073847 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattgataacatcatttgaacaagaatcacaactcaaat 21073748  T
Q  111 caactacaacatgtca--aattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 207  Q
     ||| ||||| |   |  |||||| |  ||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||    
T  21073747 taacaacaacttagaagaaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 21073648  T
Q  208 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 260  Q
      ||| ||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  21073647 acatccattcatgcatacaaacataacatcacagcaagagcacgaatttagca 21073595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 16105967 - 16105999
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  16105967 atgattatgataaagactaacccccttacctta 16105999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 20623286 - 20623318
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  20623286 atgattatgataaagactaacccccttacctta 20623318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 21233474 - 21233442
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  21233474 atgattatgataaagactaacccccttacctta 21233442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 23493917 - 23494029
Alignment:
Q  11 catcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 109  Q
    |||||||||  ||||||| ||| | |||||| | |||| |||||| | ||||||||  |||||| ||||||||||||||| ||| ||||| || | ||||    
T  23493917 catcatcaaatcatgaattatgaacacccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaat 23494016  T
Q  110 tcaactacaacat 122  Q
    ||||| |||||||    
T  23494017 tcaacaacaacat 23494029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 25900352 - 25900320
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  25900352 atgattatgataaagactaacccccttacctta 25900320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 37053061 - 37053093
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  37053061 atgattatgataaagactaacccccttacctta 37053093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 256
Target Start/End: Complemental strand, 21310750 - 21310709
Alignment:
Q  215 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 256  Q
    ||||||||| |||||||||||||| |||| ||||||||||||    
T  21310750 ttcatgcattcaaacatatcatcatagttagagcacgaattt 21310709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 256
Target Start/End: Complemental strand, 23981557 - 23981516
Alignment:
Q  215 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 256  Q
    |||||||||||||||||||||||| | || ||||||||||||    
T  23981557 ttcatgcatacaaacatatcatcataattagagcacgaattt 23981516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 108760 - 108728
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  108760 atgattatgatgaagactaacccccttacctta 108728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 122
Target Start/End: Original strand, 7728466 - 7728530
Alignment:
Q  58 acaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 122  Q
    ||||||||  |||||| ||||||||||||||| ||| ||||| || | ||||||||| |||||||    
T  7728466 acaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat 7728530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 9730310 - 9730278
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  9730310 atgattatgatgaagactaacccccttacctta 9730278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 16536514 - 16536546
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||| ||||    
T  16536514 atgattatgataaagactaacccccttatctta 16536546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 32950879 - 32950951
Alignment:
Q  193 acaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 265  Q
    ||||||||||| |||| ||||| |||| || || || ||| ||||| |||| ||||||||||||| |||||||    
T  32950879 acaatcatacaattatcatcaaatcatacacacgaaaataacatcacagttagagcacgaatttaacaacaat 32950951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 15 - 346
Target Start/End: Original strand, 41733 - 42066
Alignment:
Q  15 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 114  Q
    |||||| |||||||||| |||||||| | ||||||||||| |||||||| | |||| || | | | ||||||||| |||||||||||| ||||||  |||    
T  41733 atcaattcatgaatatgcatacccaaccaatgattcatcatctacaacaacaattaacagccatagcatcaattgaacaagaatcataactcaatctaac 41832  T
Q  115 tacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc 212  Q
     ||||| |  |||| |||| | |||  |||||||||||| || || |||||| ||||||||| | |||| ||| | |||||||||   ||| |||| |||    
T  41833 aacaacttagcaaaattcaccaattgagcacaattttcacaaattatcatttttacatatttgagcatgtaatttcaccaacaatatgacaattatcatc 41932  T
Q  213 aattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgat 312  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  41933 aattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgat 42032  T
Q  313 gatgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||| |||||||||||||||    
T  42033 gatgattatgataaagaccaacccccttacctta 42066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 150; Significance: 3e-79; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 11 - 346
Target Start/End: Complemental strand, 1218 - 882
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | |||||  |||| |||| | ||||||| ||| |||||||| | | |||||||    
T  1218 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataacataaattaacatccataacatcacttgaacaagaataaaatctcaatt 1119  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||| ||||| |  |||| |||||| |||  |||||||||||| ||||| | |||| ||||||||| |||||| ||| | ||||||||||||||| ||||    
T  1118 -aacaacaacttagcaaaattcatcaattgagcacaattttcacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattat 1020  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 308  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||  |||     
T  1019 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgtaaag 920  T
Q  309 tgatgatgattatgataaagactaacccccttacctta 346  Q
    ||| ||||||||||||||||||||||||||||||||||    
T  919 tgaagatgattatgataaagactaacccccttacctta 882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 150; Significance: 3e-79; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 22 - 346
Target Start/End: Original strand, 23153458 - 23153786
Alignment:
Q  22 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 121  Q
    |||||||||||||||||||   ||||||||||||| |||||||| |||| || | | || |||||||| |||||||||||| ||||||  ||| |||||     
T  23153458 catgaatatgtatacccaagtaatgattcatcaaccacaacatcaattaacagccataatatcaattgaacaagaatcataactcaatctaacaacaact 23153557  T
Q  122 tgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 219  Q
    |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||    
T  23153558 tagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcat 23153657  T
Q  220 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatga 317  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||| |||||| ||   |||||||||||||||||||||||||||||||||||||||||    
T  23153658 gcatacaaacatatcatcacagttggagcacgaatttagaaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatga 23153757  T
Q  318 ttatgataaagactaacccccttacctta 346  Q
    ||||||| |||||||||||||||||||||    
T  23153758 ttatgatgaagactaacccccttacctta 23153786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 15 - 345
Target Start/End: Complemental strand, 14626377 - 14626045
Alignment:
Q  15 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 114  Q
    |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |||||||||||  ||||||||| | ||||| | |||    
T  14626377 atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatctcaagttaac 14626278  T
Q  115 tacaacatgtca-aattcatccatttgcaca--attttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattat 211  Q
     ||||| |  || |||||| ||| |||||||  ||||||||||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||    
T  14626277 aacaacttagcataattca-ccaattgcacacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcat 14626179  T
Q  212 caattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatga 311  Q
    ||||||||||||||||||||| ||||| ||   ||||||||||||||||| ||| ||||||||||| |||||| ||||||||||| |||||  ||| |||    
T  14626178 caattcatgcatacaaacataacatcacagcaagagcacgaatttagcaataattatccataatcacaattcaaacaacatttgagaatttgtaaagtga 14626079  T
Q  312 tgatgattatgataaagactaacccccttacctt 345  Q
     ||||||| ||||||  |||||||||||||||||    
T  14626078 agatgattgtgataataactaacccccttacctt 14626045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 11 - 272
Target Start/End: Complemental strand, 35009702 - 35009439
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || ||||||||||||||| ||| |  ||  | |  ||||    
T  35009702 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataatt 35009603  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
    |||| |||||||  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| ||||    
T  35009602 caacaacaacatagcaaaattcaccaattgagcacaattttcaaaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattat 35009503  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
     |||||||||||||||||||| || ||||| |||| ||||||||||||||||||||| ||||||    
T  35009502 catcaattcatgcatacaaacttaacatcacagttagagcacgaatttagcaacaattatccat 35009439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 22 - 272
Target Start/End: Complemental strand, 1657999 - 1657748
Alignment:
Q  22 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 121  Q
    |||||||||| |||||||| |  |||||||||||| |||||||| |||| || ||| |||||||| || |||||||||||| ||||||||| | | |||     
T  1657999 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataacatcaactgaacaagaatcataactcaattca-caataact 1657901  T
Q  122 tgtcaaattc-atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 219  Q
    |  |||| || ||| |||  ||||||||||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| ||||||||||    
T  1657900 tagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcat 1657801  T
Q  220 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    |||| |||||||| ||||| |||| ||||||||||||||||||||| ||||||    
T  1657800 gcatccaaacataacatcacagttagagcacgaatttagcaacaattatccat 1657748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 22 - 272
Target Start/End: Original strand, 15862484 - 15862734
Alignment:
Q  22 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 121  Q
    |||||||||| |||||||| |  |||||||||||| |||||||| |||| || ||| ||||| ||| | |||||||||||| ||||||||| | | |||     
T  15862484 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattatcagcaataacataaat-gaacaagaatcataactcaattca-caataact 15862581  T
Q  122 tgtcaaattc-atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 219  Q
    |  |||| || ||| |||  ||||||||||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| ||||||||||    
T  15862582 tagcaaaatccatcaattgagcacaattttcataacttcacatttatacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcat 15862681  T
Q  220 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    ||||||||||||| ||||| |||| |||||||||||||| |||||| ||||||    
T  15862682 gcatacaaacataacatcacagttagagcacgaatttagtaacaattatccat 15862734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 15 - 347
Target Start/End: Complemental strand, 1650352 - 1650020
Alignment:
Q  15 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 114  Q
    |||||| |||||||||| |||||||| |  |||||||||||| |||||||| | || || ||| |||||||||||  ||||||||| | ||||| | |||    
T  1650352 atcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaattaac 1650253  T
Q  115 tacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc 212  Q
     | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||  ||||||||| |||||| ||| | ||||||||||||||| |||| |||    
T  1650252 cataacttagcaaaattcaccaattgagcacaattttcacaacttatcattcttacatatttgaacatgtaatttcaccaacaatcatacaattatcatc 1650153  T
Q  213 aattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatga 311  Q
    ||||||||||||||||| || ||||| |||  |||||||||| |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||||| |    
T  1650152 aattcatgcatacaaacgtaacatcacagtaagagcacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaaaatta 1650055  T
Q  312 tgatgattatgataaagactaacccccttaccttaa 347  Q
      ||||||||||||||||||||||||||||||||||    
T  1650054 -catgattatgataaagactaacccccttaccttaa 1650020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 277 - 346
Target Start/End: Original strand, 23148266 - 23148335
Alignment:
Q  277 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23148266 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctta 23148335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 260
Target Start/End: Original strand, 25175563 - 25175815
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| |||||||||| | ||||| |    
T  25175563 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 25175662  T
Q  111 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 207  Q
     ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||    
T  25175663 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 25175762  T
Q  208 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 260  Q
      ||||||||||||||||||||||| || || ||   ||||||||||||||||    
T  25175763 acatcaattcatgcatacaaacataacaacacagcaagagcacgaatttagca 25175815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 27740838 - 27740941
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| |||||||||| |||||||||| || ||||||||   ||  | |||| |||||||||| ||| |||||||| |||||||    
T  27740838 catcatcaattcatgaatatgcatacccaaaccatgattcatccacaacaacatcagataatagcaaccacatcaattgaacatgaatcatatctcaatt 27740937  T
Q  111 caac 114  Q
    ||||    
T  27740938 caac 27740941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 272
Target Start/End: Original strand, 27751605 - 27751688
Alignment:
Q  189 accaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    ||||||||||||||| || | ||||||||||||||||||||||| ||||| | || ||||||||||||||| ||| | ||||||    
T  27751605 accaacaatcatacaattgtcatcaattcatgcatacaaacataacatcacaattagagcacgaatttagctacatttatccat 27751688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 260
Target Start/End: Complemental strand, 27654235 - 27653983
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||| |||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  | ||||||| | | |||||||||| | ||||| |    
T  27654235 catcattaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcattggaacaagaatcacaactcaaat 27654136  T
Q  111 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 207  Q
     ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||    
T  27654135 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 27654036  T
Q  208 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 260  Q
      |||||||||||||||||| |||| ||||| ||   ||||||||||||||||    
T  27654035 acatcaattcatgcatacaagcataacatcacagcaagagcacgaatttagca 27653983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 16825874 - 16825752
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatca--tacacttattatcaattcatgcatacaaacatatcatc 237  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |  ||||  ||  ||||||||||||||||||||||| ||||    
T  16825874 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattaattacaactaacatcaattcatgcatacaaacataacatc 16825775  T
Q  238 aaagttggagcacgaatttagca 260  Q
    | ||   ||||||||||||||||    
T  16825774 acagcaagagcacgaatttagca 16825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 19983224 - 19983186
Alignment:
Q  314 atgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  19983224 atgattatgataaaaactaacccccttaccttaattatc 19983186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 272
Target Start/End: Original strand, 29665937 - 29666137
Alignment:
Q  75 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatat 172  Q
    ||||||||||||||| ||| |||||||| |||| |||||| ||||| |  |||| |||| | |||  | ||||||| ||||||||  ||||| | ||||     
T  29665937 caacaacatcaattgaacatgaatcatatctcatttcaacaacaacttagcaaaattcaccaattgagtacaattt-cataacttgacatttatgcatac 29666035  T
Q  173 tt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcc 270  Q
    ||  ||||||| ||| | ||| ||||||||||| |||| |||||||||| ||||  || ||| ||||| || | ||||||||||||| ||||||| ||||    
T  29666036 tttgaaacatgtaatttcacccacaatcatacaattatcatcaattcatacataagaaaataacatcacagctagagcacgaatttaacaacaattatcc 29666135  T
Q  271 at 272  Q
    ||    
T  29666136 at 29666137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 35015089 - 35015051
Alignment:
Q  314 atgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  35015089 atgattatgataaaaactaacccccttaccttaattatc 35015051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 121
Target Start/End: Complemental strand, 18381914 - 18381821
Alignment:
Q  28 tatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 121  Q
    |||| |||||||| | |||| |||||||| ||||||||  |||||| ||||||||||||||| ||| || || || | ||||||||| ||||||    
T  18381914 tatgaatacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttatcacaattcaacaacaaca 18381821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 18002427 - 18002395
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  18002427 atgattatgataaagactaacccccttacctta 18002395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 23995247 - 23995279
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  23995247 atgattatgataaagactaacccccttacctta 23995279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 26090059 - 26090091
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  26090059 atgattatgataaagactaacccccttacctta 26090091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 314 - 345
Target Start/End: Original strand, 4991396 - 4991427
Alignment:
Q  314 atgattatgataaagactaacccccttacctt 345  Q
    ||||||||||||||||||||||||||||||||    
T  4991396 atgattatgataaagactaacccccttacctt 4991427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 346
Target Start/End: Complemental strand, 15742150 - 15742120
Alignment:
Q  316 gattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||    
T  15742150 gattatgataaagactaacccccttacctta 15742120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 18583640 - 18583678
Alignment:
Q  314 atgattatgataaagactaacccccttaccttaattatc 352  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  18583640 atgattatgatgaaaactaacccccttaccttaattatc 18583678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 256
Target Start/End: Complemental strand, 16887833 - 16887792
Alignment:
Q  215 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 256  Q
    ||||||||||||||||||| |||| |||| ||||||||||||    
T  16887833 ttcatgcatacaaacatattatcatagttagagcacgaattt 16887792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 33324898 - 33324939
Alignment:
Q  215 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 256  Q
    |||||||||||||||||||||||  |||| ||||||||||||    
T  33324898 ttcatgcatacaaacatatcatcctagttagagcacgaattt 33324939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 256
Target Start/End: Complemental strand, 35136054 - 35136013
Alignment:
Q  215 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 256  Q
    |||||||||||||||||||||||  |||| ||||||||||||    
T  35136054 ttcatgcatacaaacatatcatcctagttagagcacgaattt 35136013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 1657693 - 1657661
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  1657693 atgattatgatgaagactaacccccttacctta 1657661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 15862789 - 15862821
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  15862789 atgattatgatgaagactaacccccttacctta 15862821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 18823315 - 18823283
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  18823315 atgattatgatgaagactaacccccttacctta 18823283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 18839170 - 18839138
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  18839170 atgattatgatgaagactaacccccttacctta 18839138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 22362014 - 22361926
Alignment:
Q  11 catcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaat 98  Q
    |||||||||| ||||||| ||| | |||||| | |||| |||||||| |||| |||  |||||| ||||||||||||||| ||| ||||    
T  22362014 catcatcaattcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaat 22361926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 122
Target Start/End: Complemental strand, 25367438 - 25367374
Alignment:
Q  58 acaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 122  Q
    ||||||||  |||||| ||||||||||||||| ||| ||||| || | ||||||||| |||||||    
T  25367438 acaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat 25367374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 27751742 - 27751774
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  27751742 atgattatgatgaagactaacccccttacctta 27751774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 32276691 - 32276659
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  32276691 atgattatgatgaagactaacccccttacctta 32276659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 17 - 346
Target Start/End: Original strand, 272031 - 272362
Alignment:
Q  17 caatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaacta 116  Q
    |||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | |||| |||||| |||||||||||| |||||| |||| |    
T  272031 caattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagctataacaccaattgaacaagaatcataactcaatccaacca 272130  T
Q  117 caacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaa 214  Q
    |||| |  |||| |||| | |||| |||||||||||| ||||| |||||| | | ||||| |||||| ||| |  ||| |||||||||| |||| |||||    
T  272131 caacttagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttctccatcaatcatacaattatcatcaa 272230  T
Q  215 ttcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatga 314  Q
    ||||| |||||||||||||||| | |||||||| ||| ||||||||| | | |||||||||||||||| |||||| ||||||||||||||||||||||||    
T  272231 ttcattcatacaaacatatcattacagttggagtacgtatttagcaatatttatccataatcaaaatttatacaatatttgaaaatttacaaaatgatga 272330  T
Q  315 tgattatgataaagactaacccccttacctta 346  Q
    ||||||||||||||||||||||||||||||||    
T  272331 tgattatgataaagactaacccccttacctta 272362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 143; Significance: 5e-75; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 22 - 346
Target Start/End: Complemental strand, 247694 - 247366
Alignment:
Q  22 catgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 121  Q
    |||||||||| |||||||| | ||||||||||||| |||||||| |||| ||   | ||||||||||| |||||||||||| ||||||  ||| |||||     
T  247694 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataactcaatctaacaacaact 247595  T
Q  122 tgtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat 219  Q
    |  |||| |   ||| |||  ||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||  |||||||||| |||| ||||||||||    
T  247594 tagcaaaatttaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgaaatttcaccctcaatcatacaattatcatcaattcat 247495  T
Q  220 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatga 317  Q
    ||||||||||||||||| | |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||||||||||||||||||    
T  247494 gcatacaaacatatcattacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatga 247395  T
Q  318 ttatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||    
T  247394 ttatgataaagactaacccccttacctta 247366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 34107 - 34075
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  34107 atgattatgatgaagactaacccccttacctta 34075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 143; Significance: 5e-75; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 11 - 346
Target Start/End: Complemental strand, 128431 - 128095
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| |||||||| | || |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | |||||||    
T  128431 catcatcaattcatgaatatgcatacccaatcaattattcatcaatcacaacatccattaacatccataacatcaattgaacaagaatcaaatctcaatt 128332  T
Q  111 caactacaacatgtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||| ||||| |  |||| |   ||| |||  ||||||||||| |||||  ||  | |||| |||| |||||| ||| | |||||||||| |||| ||||    
T  128331 -aacaacaacctaacaaaattcgccaattgagcacaattttcacaacttaacacctttacacatttgaacatgtaatttcaccaacaatcttacaattat 128233  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 308  Q
     ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||| |||||    
T  128232 catcaattcatgcatacaaacatatcatcacagttgaagcacgaatttagcaacaattatccataagcaaaattcatacaacttttgaaaatttgcaaaa 128133  T
Q  309 tgatgatgattatgataaagactaacccccttacctta 346  Q
    ||| ||||||||||||||||||||||||||||||||||    
T  128132 tgaagatgattatgataaagactaacccccttacctta 128095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 238
Target Start/End: Complemental strand, 31787 - 31697
Alignment:
Q  148 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 238  Q
    |||||||||| |||||| | ||||| | || ||| ||| | |||||||||||||||  ||  |||||||||||||| |||||||| |||||    
T  31787 ttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatgcattcaaacataacatca 31697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 11 - 346
Target Start/End: Complemental strand, 6326 - 5990
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| |||||||| | || |||||||||  | ||||   |||| |||| | ||||||| ||| |||||||||| | |||||||    
T  6326 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataacaaaaattaacatccataacatcacttgaacaagaatcaaatctcaatt 6227  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||| ||||| |  |||| |||| | |||  |||||||||| | ||||| | |||| ||||||||| |||||| ||| | ||||||||||||||| ||||    
T  6226 -aacaacaacttagcaaaattcaccaattcagcacaatttttacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattat 6128  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 308  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| ||||     
T  6127 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgcaaag 6028  T
Q  309 tgatgatgattatgataaagactaacccccttacctta 346  Q
    |||  |||||||||||||||||||||||||||||||||    
T  6027 tgaaaatgattatgataaagactaacccccttacctta 5990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 11 - 346
Target Start/End: Original strand, 12115 - 12450
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| |||||||| | || |||||| ||  | |||||| |||| |||  | ||||||||||| |||||||||| | |||||||    
T  12115 catcatcaatccatgaatatgcatacccaagcaattattcatgaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaatt 12214  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
      || ||||| |  |||| |||| | |||| |||||||||||| ||||| |||||| |||| ||||||||||| | | | ||||||||||||||| ||||    
T  12215 --acaacaacttaacaaaattcaccaatttagcacaattttcacaacttatcatttttacacatttaaacatgtattttcaccaacaatcatacaattat 12312  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaa-ttcatacaacatttgaaaatttacaaa 307  Q
     ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||| |||||||| |||||| ||| |||||||    
T  12313 catcaattcatgcatacaaacatatcatcacagttagagcacgaatttagcaacaattatccataatcaaaatttcatacagcatttg-aaagttacaaa 12411  T
Q  308 atgatgatgattatgataaagactaacccccttacctta 346  Q
    || | ||||||||||||||||||||||||||||||||||    
T  12412 attaagatgattatgataaagactaacccccttacctta 12450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 139; Significance: 1e-72; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 11 - 346
Target Start/End: Complemental strand, 26678 - 26340
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||| ||||| ||| |||||| |||||||| | ||||||||||||  |||||||| |||| || | | ||||||||||| |||||||||||| |||| |     
T  26678 catcctcaattcatcaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagccataacatcaattgaacaagaatcataactcattc 26579  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||| ||||| |  |||| |||| | |||  | |||||||||| ||||| |||||| ||||||||| |||||| | | | ||||| |||| |||| ||||    
T  26578 taacaacaacttagcaaaattcaccaattgagaacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaataatcttacaattat 26479  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat-caaaattcatacaacatttgaaaatttacaaa 307  Q
     ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||| ||  |||||||||||||||||||||||||||||||    
T  26478 catcaattcacgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatacattatgaaaaattcatacaacatttgaaaatttacaaa 26379  T
Q  308 atgatgatgattatgataaagactaacccccttacctta 346  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  26378 atgatcatgattatgataaagactaacccccttacctta 26340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 11 - 272
Target Start/End: Complemental strand, 8440 - 8180
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||| ||||| |||||||| | ||||||||| ||| |||||||| |||| || ||||||||||||||| ||| |  ||  | |  ||||    
T  8440 catcatcaattcatgtatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataatt 8341  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
    ||||   |||||  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || ||| || ||| | ||||||||||||||| ||||    
T  8340 caac---aacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacctgtaatttcaccaacaatcatacaattat 8244  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
     | ||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| ||||||    
T  8243 caccaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatccat 8180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 140 - 344
Target Start/End: Complemental strand, 51314 - 51110
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 239  Q
    |||||||||||| ||||| |||||| ||| ||||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||| |||||||||     
T  51314 gcacaattttcacaacttatcatttttacctatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcac 51215  T
Q  240 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 339  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  51214 agttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaatctcct 51115  T
Q  340 tacct 344  Q
    |||||    
T  51114 tacct 51110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 134; Significance: 1e-69; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 11 - 346
Target Start/End: Original strand, 8878 - 9215
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| |||||||| | || |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| |    
T  8878 catcatcaatacatgaatatgcatacccaagcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat 8977  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| |||||  ||||| |||||| || |||||| ||| | |||||||||| |||| ||||    
T  8978 taacaacaacttaacaaaattcaccaattgagcacaattttcacaacttaacatttttacataattgaacatgtaatttcaccaacaatcttacaattat 9077  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 308  Q
     ||| ||||||||||||||||||| ||||| |  |||||||||||||||||||||||  ||||||| |||||||| |||||| ||||||||||| |||||    
T  9078 catcgattcatgcatacaaacataacatcacaaatggagcacgaatttagcaacaattttccataagcaaaattcgtacaacttttgaaaatttgcaaaa 9177  T
Q  309 tgatgatgattatgataaagactaacccccttacctta 346  Q
    ||| ||||||||||||||||||||||||||||||||||    
T  9178 tgaagatgattatgataaagactaacccccttacctta 9215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 133; Significance: 4e-69; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 11 - 336
Target Start/End: Complemental strand, 5324 - 4996
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||| ||||| |||||||||| |||||||| | ||||||||||||  |||||||| |||| || | | ||||||||||| |||||||||||| |||| |     
T  5324 catcctcaattcatgaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagccataacatcaattgaacaagaatcataactcattc 5225  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| | | | |||||||||| |||| ||||    
T  5224 taacaacaactttgcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaacaatcttacaattat 5125  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat-caaaattcatacaacatttgaaaatttacaaa 307  Q
     ||||||||| ||||||||||||||| ||| |||||||| ||||||||||||||||| |||||| ||  |||||||||||||||||||||||||||||||    
T  5124 catcaattcacgcatacaaacatatcgtcacagttggagtacgaatttagcaacaattatccattatgaaaaattcatacaacatttgaaaatttacaaa 5025  T
Q  308 atgatgatgattatgataaagactaaccc 336  Q
    ||||| |||||||||||||||||||||||    
T  5024 atgataatgattatgataaagactaaccc 4996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 11 - 346
Target Start/End: Complemental strand, 123427 - 123087
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||| ||||| |||||||||| |||||||| | || |||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| || |||     
T  123427 catcttcaattcatgaatatgcatacccaagccattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataacttaatc 123328  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| ||||    
T  123327 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattat 123228  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-a 305  Q
     ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||   ||||||||||||||||||| |||||||| |    
T  123227 catcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgcaaatttacaa 123128  T
Q  306 aaatgatgatgattatgataaagactaacccccttacctta 346  Q
    |||| |||||||||||| | |||||||||||||||||||||    
T  123127 aaattatgatgattatggtgaagactaacccccttacctta 123087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 128; Significance: 4e-66; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 11 - 346
Target Start/End: Original strand, 8849 - 9192
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| ||||||||||||||||||| | ||||||||||||| |||||||| ||||  | ||| ||||||||||| |||  ||||||| |||||||    
T  8849 catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaatagcaataacatcaattgaacattaatcatatctcaatt 8948  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
    |||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| ||||    
T  8949 caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattat 9048  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaa 306  Q
     ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||  ||   ||||| ||||| ||||||||||| || |||    
T  9049 catcaattcatgcatacaaacatatcatcacagatggagcacgaatttagcaacaattatccaattatgaaaaatacataccacatttgaaaaattgcaa 9148  T
Q  307 a----atgatgatgattatgataaagactaacccccttacctta 346  Q
    |    ||||||||||||||||| ||||||||| | |||||||||    
T  9149 aaatgatgatgatgattatgatgaagactaacacacttacctta 9192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 11 - 298
Target Start/End: Original strand, 148721 - 149012
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||  |||||||| | ||||||||||||| ||||| || |||| || | | ||||||||||| |||||||||| | ||||| |    
T  148721 catcatcaattcatgaatatacatacccaagcaatgattcatcaaccacaacttcaattaacaaccataacatcaattgaacaagaatcaaatctcaaat 148820  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| ||||    
T  148821 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattat 148920  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaa 298  Q
     ||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||| ||| || ||   ||||||||||||||||||||||    
T  148921 catcaattcatgcatacaaacatatcatcacagttggagcacaaatttaacaacaattatcaattatgcaaaaattcatacaacatttgaaa 149012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 146838 - 146938
Alignment:
Q  246 agcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctt 345  Q
    |||| |||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  146838 agcatgaatttaggaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctt 146937  T
Q  346 a 346  Q
    |    
T  146938 a 146938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 123; Significance: 4e-63; HSPs: 4)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 107 - 272
Target Start/End: Original strand, 26892 - 27058
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 205  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  26892 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 26991  T
Q  206 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26992 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 27058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 107 - 265
Target Start/End: Original strand, 22637 - 22796
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 205  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  22637 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 22736  T
Q  206 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 265  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22737 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 22796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 22857 - 22889
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  22857 atgattatgataaagactaacccccttacctta 22889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 27112 - 27144
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  27112 atgattatgataaagactaacccccttacctta 27144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 123; Significance: 4e-63; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 107 - 272
Target Start/End: Complemental strand, 1748 - 1582
Alignment:
Q  107 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 205  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  1748 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 1649  T
Q  206 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1648 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 1582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 1528 - 1496
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  1528 atgattatgataaagactaacccccttacctta 1496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 118; Significance: 4e-60; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 140 - 346
Target Start/End: Complemental strand, 89586 - 89378
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 239  Q
    |||||||||||| ||||| | |||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||| |||||||||     
T  89586 gcacaattttcacaacttataatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaatatatcatcac 89487  T
Q  240 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccc 337  Q
    |||||||||||||||||||||||||| |||||| ||   |||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  89486 agttggagcacgaatttagcaacaattatccattatgcaaaaattcatagaacatttgaaaatttacaaaatgatgatgatcatgatgaagactaacccc 89387  T
Q  338 cttacctta 346  Q
    |||||||||    
T  89386 cttacctta 89378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 221 - 346
Target Start/End: Complemental strand, 107835 - 107708
Alignment:
Q  221 catacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgat 318  Q
    |||||||| ||||||||| |||||||||||||||||||||| ||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||    
T  107835 catacaaatatatcatcacagttggagcacgaatttagcaaaaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 107736  T
Q  319 tatgataaagactaacccccttacctta 346  Q
     ||||| |||||||||||||||||||||    
T  107735 catgatgaagactaacccccttacctta 107708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 314 - 345
Target Start/End: Original strand, 130880 - 130911
Alignment:
Q  314 atgattatgataaagactaacccccttacctt 345  Q
    ||||||||||||||||||||||||||||||||    
T  130880 atgattatgataaagactaacccccttacctt 130911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 79745 - 79786
Alignment:
Q  215 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 256  Q
    |||||||||||||||||||||||| |||| | ||||||||||    
T  79745 ttcatgcatacaaacatatcatcatagttagtgcacgaattt 79786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 101; Significance: 5e-50; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 11 - 265
Target Start/End: Original strand, 48187 - 48443
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| |||||||  | || |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| |    
T  48187 catcatcaatccatgaatatgcatacccaggcaattattcatcaatcacaacatcaattaacatctataacatcaattgaacaagaatcaaatctcaaat 48286  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| ||||    
T  48287 taacaacaacttaacaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattat 48386  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 265  Q
     ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  48387 catcaattcatgcatacaaacatatcattacagttggagcacgaatttagcaacaat 48443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 352
Target Start/End: Original strand, 20493 - 20530
Alignment:
Q  315 tgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||| || ||||||||||||||||||||||||    
T  20493 tgattatgatgaacactaacccccttaccttaattatc 20530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 100; Significance: 2e-49; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 11 - 272
Target Start/End: Original strand, 13506 - 13769
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||| ||||| |||||||||| ||||||||   ||||||||||||| |||||||| |||| || ||||||||||||||| ||| |  ||  | |  ||||    
T  13506 catcgtcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataatt 13605  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
    |||| |||||||  |||| |||||| |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| ||||    
T  13606 caacaacaacatagcaaaattcatcaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattat 13705  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
     ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||    
T  13706 catcaattcatgcatacaaacataacatcaaagttagagcacgaatttagcaacaattatccat 13769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 13824 - 13856
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  13824 atgattatgatgaagactaacccccttacctta 13856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 93; Significance: 3e-45; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 11 - 265
Target Start/End: Original strand, 107747 - 108003
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| | |||||| | || |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| |    
T  107747 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat 107846  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     ||| ||||| | ||||| |||| | |||  |||||||||| | ||||| |||||| | || |||| |||||| ||| | ||||||||||||||| ||||    
T  107847 taacaacaacttatcaaaattcaccaattgagcacaatttttacaacttatcatttttgcacatttgaacatgtaatttcaccaacaatcatacaattat 107946  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 265  Q
     ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  107947 catcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaat 108003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 140 - 256
Target Start/End: Complemental strand, 64648 - 64527
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc-----aattcatgcatacaaacatatc 234  Q
    ||||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || |||     |||||||||||| ||||||| |    
T  64648 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaatataattcatgcatataaacataac 64549  T
Q  235 atcaaagttggagcacgaattt 256  Q
    |||| ||   ||||||||||||    
T  64548 atcacagcaagagcacgaattt 64527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 215 - 257
Target Start/End: Complemental strand, 89905 - 89863
Alignment:
Q  215 ttcatgcatacaaacatatcatcaaagttggagcacgaattta 257  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  89905 ttcatgcatacaaacatatcatcatagttggagcacgaattta 89863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 11 - 272
Target Start/End: Original strand, 41648 - 41911
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| ||||||||  ||| || ||||||||||||||| ||| |  ||  | |  ||||    
T  41648 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcatttaacaacaacaacatcaattgaacatggttctcatcataatt 41747  T
Q  111 caactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 207  Q
    |||| |||||||  |||| |||| ||| |||  ||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||    
T  41748 caacaacaacatagcaaaattca-ccaattgaacacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaatta 41846  T
Q  208 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    | ||||||||||||||||||||||| ||||| |||| ||||||||||||| ||||||| ||||||    
T  41847 tcatcaattcatgcatacaaacataacatcacagttagagcacgaatttaacaacaattatccat 41911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 346
Target Start/End: Original strand, 41957 - 41997
Alignment:
Q  306 aaatgatgatgattatgataaagactaacccccttacctta 346  Q
    ||||||  ||||||||||| |||||||||||||||||||||    
T  41957 aaatgaacatgattatgatgaagactaacccccttacctta 41997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 11 - 272
Target Start/End: Complemental strand, 797 - 534
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||| ||||| | |||||||| |||||||| | ||||||||||||| |||||||| ||||||| | | ||||||||||  |||||||||||| || |||     
T  797 catcctcaattcctgaatatgcatacccaagcaatgattcatcaaccacaacatcaattagcagccataacatcaattaaacaagaatcataacttaatc 698  T
Q  111 caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 208  Q
     |||   ||| |  |||| |||| | |||  | |||||||||| ||||  |||||| | | ||||| |||||| ||| | ||||||||||||||| ||||    
T  697 taacagtaacttagcaaaattcaccaattgagtacaattttcacaactcatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattat 598  T
Q  209 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  597 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccat 534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 140 - 265
Target Start/End: Original strand, 5660 - 5785
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 239  Q
    ||||||| ||||| |||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||||||||| ||||||    
T  5660 gcacaatattcatgacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcaa 5759  T
Q  240 agttggagcacgaatttagcaacaat 265  Q
    ||||||||||||||||||||||||||    
T  5760 agttggagcacgaatttagcaacaat 5785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 5846 - 5878
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||| |||||||||||||||||||||||    
T  5846 atgattatggtaaagactaacccccttacctta 5878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 11 - 272
Target Start/End: Complemental strand, 34724 - 34460
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgca-caagaatcatagctcaat 109  Q
    ||||||||||||||||||||| ||||||||    |||||||||||| |||||||| | || || ||| ||||||||||  | || |||||||| ||||||    
T  34724 catcatcaatccatgaatatgcatacccaagtagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaat 34625  T
Q  110 tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 207  Q
    ||||| ||||| |  |||| |||| | |||  | |||||||||| ||||||  |||| |||| | || |||||| ||| | ||||||||||||||| |||    
T  34624 tcaacaacaacttagcaaaattcacctattgagaacaattttcacaacttcatatttttacacaattgaacatgtaatttcaccaacaatcatacaatta 34525  T
Q  208 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    | ||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||| ||||||    
T  34524 tcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaataattatccat 34460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 261
Target Start/End: Original strand, 2966 - 3215
Alignment:
Q  15 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgca-caagaatcatagctcaattcaa 113  Q
    |||||| |||||||||| |||| ||| |  |||||||||||| |||||||| | || || ||| ||||||||||  | || |||||||| ||||||||||    
T  2966 atcaattcatgaatatgcatacacaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaattcaa 3065  T
Q  114 ctacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattat 211  Q
    | ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| ||    
T  3066 caacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcat 3165  T
Q  212 caattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaa 261  Q
    ||||||||| ||||||||||| ||||| ||   |||||||||||||||||    
T  3166 caattcatggatacaaacataacatcacagcaagagcacgaatttagcaa 3215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 238
Target Start/End: Complemental strand, 9596 - 9371
Alignment:
Q  15 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 114  Q
    |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | ||||||| |||  ||||||||| | ||||| | |||    
T  9596 atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcatttgagcaagaatcaaatctcaaattaac 9497  T
Q  115 tacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc 212  Q
     | ||| |  |||| |||| | |||  |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||    
T  9496 aataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatc 9397  T
Q  213 aattcatgcatacaaacatatcatca 238  Q
    |||||||||||||||||||| |||||    
T  9396 aattcatgcatacaaacataacatca 9371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 238
Target Start/End: Complemental strand, 16494 - 16269
Alignment:
Q  15 atcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 114  Q
    |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | ||||||| |||  ||||||||| | ||||| | |||    
T  16494 atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcatttgagcaagaatcaaatctcaaattaac 16395  T
Q  115 tacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc 212  Q
     | ||| |  |||| |||| | |||  |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||    
T  16394 aataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatc 16295  T
Q  213 aattcatgcatacaaacatatcatca 238  Q
    |||||||||||||||||||| |||||    
T  16294 aattcatgcatacaaacataacatca 16269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 13445 - 13325
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 239  Q
    |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||     
T  13445 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 13346  T
Q  240 agttggagcacgaatttagca 260  Q
    | |  |||||||||| |||||    
T  13345 actaagagcacgaatctagca 13325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 140 - 256
Target Start/End: Original strand, 167 - 283
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 239  Q
    ||||||| | |||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||     
T  167 gcacaatatacataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac 266  T
Q  240 agttggagcacgaattt 256  Q
    ||   ||||||||||||    
T  267 agcaagagcacgaattt 283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 222
Target Start/End: Complemental strand, 5466 - 5254
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| | |||||| | || |||||| ||  |||||||| |||| |||  | ||||||||||| |||||||||| | ||||| |    
T  5466 catcatcaatccatgaatatgca-acccaagcaattattcattaatcacaacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaat 5368  T
Q  111 caactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 207  Q
     ||| |||||    |||| |||| ||| |||  ||||||||||||||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||    
T  5367 taacaacaactcagcaaaattca-ccaattgaacacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaatta 5269  T
Q  208 ttatcaattcatgca 222  Q
    | |||||||||||||    
T  5268 tcatcaattcatgca 5254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 102963 - 102923
Alignment:
Q  215 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 255  Q
    ||||||||| |||||||||||||| | ||||||||||||||    
T  102963 ttcatgcattcaaacatatcatcataattggagcacgaatt 102923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 9382 - 9480
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 109  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||    
T  9382 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaat 9480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 222
Target Start/End: Original strand, 3722 - 3936
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| | ||||||   || |||||||||  | |||||| |||| |||  | ||||||||||| |||||||||| | ||||| |    
T  3722 catcatcaatccatgaatatgcaaacccaagtaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaat 3821  T
Q  111 caactacaacatgtcaaa-ttcatccatttg-cacaattttcataacttctcatttct-acatatttaaacatggaatctaaccaacaatcatacactta 207  Q
     ||| ||||| |  |||| |||| | ||| | |||||||| |||||||| |||||| | |||||||| |||||| ||| | ||||||||||||||| |||    
T  3822 taacaacaacttagcaaaattcaccaattggacacaatttccataacttatcattttttacatatttgaacatgtaatttcaccaacaatcatacaatta 3921  T
Q  208 ttatcaattcatgca 222  Q
    | |||||||||||||    
T  3922 tcatcaattcatgca 3936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 237
Target Start/End: Original strand, 42997 - 43226
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    ||||||||||||||||||||| | |||||| | || |||||||||  | || ||| | || |||  | ||||||| ||| ||| |||||| | ||||| |    
T  42997 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcacttgaacacgaatcacatctcaaat 43096  T
Q  111 caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta 207  Q
     ||| ||||| |  |  ||||||| | |||| ||||||| ||||||||||  ||||| ||||||||| |||||| ||| | ||||||||||||||| |||    
T  43097 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaatta 43196  T
Q  208 ttatcaattcatgcatacaaacatatcatc 237  Q
    | ||||||||||||||| ||||||| ||||    
T  43197 tcatcaattcatgcatagaaacataacatc 43226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 1424 - 1304
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 239  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  1424 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 1325  T
Q  240 agttggagcacgaatttagca 260  Q
    ||   ||||||||||||||||    
T  1324 agcaagagcacgaatttagca 1304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 140 - 238
Target Start/End: Complemental strand, 14181 - 14083
Alignment:
Q  140 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 238  Q
    ||||||| |||||||||| |||||| ||||||||| |||||| ||| | || |||||||||| | |||| ||||||||||||||||| ||||| |||||    
T  14181 gcacaatcttcataacttatcatttttacatatttcaacatgtaatttcactaacaatcatataattatcatcaattcatgcatacagacataacatca 14083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 21233 - 21115
Alignment:
Q  143 caattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 242  Q
    |||| |||||||||| |||||| ||||||||| |||||| ||| | || |||||||||| | |||| ||||||| ||| ||||||||||| ||||| |      
T  21233 caatcttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatataattatcatcaattaatggatacaaacataacatcacaac 21134  T
Q  243 tggagcacgaatttagcaa 261  Q
      |||||||||||||||||    
T  21133 aagagcacgaatttagcaa 21115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 222
Target Start/End: Original strand, 54416 - 54630
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 110  Q
    |||||||||||||| |||||||||||||||   |||||||| | || ||||||||  |||  | ||||||||||||| | ||| |||||| | |||| ||    
T  54416 catcatcaatccataaatatgtatacccaactcatgattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcattt 54515  T
Q  111 caactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacata--tttaaacatggaatctaaccaacaatcatacactt 206  Q
    |||| ||||||| || ||||||| | |||  | |||| |||||||||||  ||||| ||||||  || ||||||| ||| | ||| ||||||||||| ||    
T  54516 caacaacaacatatcaaaattcaccaattgagtacaa-tttcataacttgacatttatacatactttgaaacatgcaatttcacccacaatcatacaatt 54614  T
Q  207 attatcaattcatgca 222  Q
    || |||||||||||||    
T  54615 atcatcaattcatgca 54630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 45338 - 45370
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  45338 atgattatgatgaagactaacccccttacctta 45370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 272
Target Start/End: Original strand, 3370 - 3453
Alignment:
Q  189 accaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 272  Q
    |||||||||||||||  ||| || ||||||||||||||||| || ||||| || | |||||||||||||||| |||| ||||||    
T  3370 accaacaatcatacaaatatcattaattcatgcatacaaacttaacatcacagctagagcacgaatttagcatcaattatccat 3453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 3210 - 3262
Alignment:
Q  13 tcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatc 65  Q
    |||||||| ||||||||||  ||||||||| ||||||||||||  ||||||||    
T  3210 tcatcaattcatgaatatgcctacccaaacaatgattcatcaatcacaacatc 3262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 80187 - 80225
Alignment:
Q  314 atgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||||||||||||||||||||||||||||||||    
T  80187 atgattatgataaagactaacccccttaccttaattatc 80225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 256
Target Start/End: Complemental strand, 1587 - 1546
Alignment:
Q  215 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 256  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  1587 ttcatgcatacaaacatatcatcatagttagagcacgaattt 1546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 256
Target Start/End: Complemental strand, 8732 - 8691
Alignment:
Q  215 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 256  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  8732 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 8216 - 8257
Alignment:
Q  215 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 256  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  8216 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 48514 - 48603
Alignment:
Q  11 catcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatca 100  Q
    ||||||||||||||||||||| | |||||| | || |||||||||  | |||||| |||| |||| | |||||||| || ||||||||||    
T  48514 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacatccataacatcaagtgaacaagaatca 48603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 265
Target Start/End: Complemental strand, 56226 - 56106
Alignment:
Q  147 tttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 244  Q
    |||||||||||  ||||| |||||| ||  ||||||| ||| | | | ||||||||||| |||| ||||| ||||||| || || ||| ||||| ||||     
T  56226 tttcataacttgacatttatacatactttaaaacatgtaatttcagccacaatcatacaattatcatcaaatcatgcacacgaaaataacatcacagtta 56127  T
Q  245 gagcacgaatttagcaacaat 265  Q
    ||||||||||||| |||||||    
T  56126 gagcacgaatttaacaacaat 56106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 256
Target Start/End: Complemental strand, 70348 - 70307
Alignment:
Q  215 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 256  Q
    |||||||||||||||||||||||| |||||||| ||||||||    
T  70348 ttcatgcatacaaacatatcatcatagttggagtacgaattt 70307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 57424 - 57392
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  57424 atgattatgataaagactaacccccttacctta 57392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 314 - 347
Target Start/End: Complemental strand, 193429 - 193396
Alignment:
Q  314 atgattatgataaagactaacccccttaccttaa 347  Q
    ||||||||||||||||||||||||||||||||||    
T  193429 atgattatgataaagactaacccccttaccttaa 193396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 6475 - 6443
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  6475 atgattatgataaagactaacccccttacctta 6443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 910 - 878
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  910 atgattatgataaagactaacccccttacctta 878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 9914 - 9882
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  9914 atgattatgataaagactaacccccttacctta 9882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 13317 - 13285
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  13317 atgattatgataaagactaacccccttacctta 13285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 33; Significance: 0.000000002; HSPs: 4)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 55904 - 55936
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  55904 atgattatgataaagactaacccccttacctta 55936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 108107 - 108075
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||||||||||||||||||||||    
T  108107 atgattatgataaagactaacccccttacctta 108075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 104871 - 104793
Alignment:
Q  11 catcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaatt 88  Q
    |||||||||| ||||||| ||| |||||||| | |||| |||||||| |||| |||  |||||| ||||||||||||||    
T  104871 catcatcaattcatgaattatgaatacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaatt 104793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 256
Target Start/End: Complemental strand, 93814 - 93773
Alignment:
Q  215 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 256  Q
    |||||||||||| ||||||||||| | |||||||||||||||    
T  93814 ttcatgcatacatacatatcatcataattggagcacgaattt 93773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 313 - 352
Target Start/End: Complemental strand, 385 - 346
Alignment:
Q  313 gatgattatgataaagactaacccccttaccttaattatc 352  Q
    ||||||||||||||||| ||||||| ||||||||||||||    
T  385 gatgattatgataaagaataaccccgttaccttaattatc 346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 346
Target Start/End: Original strand, 18015 - 18058
Alignment:
Q  303 acaaaatgatgatgattatgataaagactaacccccttacctta 346  Q
    ||||||| || ||||||||||| |||||||||||||||||||||    
T  18015 acaaaataattatgattatgatgaagactaacccccttacctta 18058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 313 - 352
Target Start/End: Complemental strand, 162111 - 162072
Alignment:
Q  313 gatgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  162111 gatgattatgatgaaaactaacccccttaccttaattatc 162072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 313 - 352
Target Start/End: Complemental strand, 166197 - 166158
Alignment:
Q  313 gatgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  166197 gatgattatgatgaaaactaacccccttaccttaattatc 166158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 197477 - 197390
Alignment:
Q  35 acccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 122  Q
    |||||||| |||| |||||||| |||| |||  |||||| ||||||||||||||| ||| |||||  | | ||||||||| |||||||    
T  197477 acccaaaccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaacat 197390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 5809 - 5771
Alignment:
Q  314 atgattatgataaagactaacccccttaccttaattatc 352  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  5809 atgattatgatgaaaactaacccccttaccttaattatc 5771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 6015 - 5977
Alignment:
Q  314 atgattatgataaagactaacccccttaccttaattatc 352  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  6015 atgattatgatgaaaactaacccccttaccttaattatc 5977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 256
Target Start/End: Complemental strand, 1386 - 1348
Alignment:
Q  218 atgcatacaaacatatcatcaaagttggagcacgaattt 256  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  1386 atgcatacaaacatatcatcatagttagagcacgaattt 1348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 256
Target Start/End: Complemental strand, 9641 - 9603
Alignment:
Q  218 atgcatacaaacatatcatcaaagttggagcacgaattt 256  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  9641 atgcatacaaacatatcatcatagttagagcacgaattt 9603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 31212 - 31174
Alignment:
Q  314 atgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||| ||||||| ||||||||||||||||||||||||    
T  31212 atgattgtgataaaaactaacccccttaccttaattatc 31174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 352
Target Start/End: Original strand, 1701 - 1738
Alignment:
Q  315 tgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||| || ||||||||||||||||||||||||    
T  1701 tgattatgatgaacactaacccccttaccttaattatc 1738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 2471 - 2532
Alignment:
Q  28 tatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg 89  Q
    |||| |||||||| | |||| |||||||| ||||||||  |||||| |||||||||||||||    
T  2471 tatgaatacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattg 2532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 352
Target Start/End: Original strand, 94 - 131
Alignment:
Q  315 tgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||| || ||||||||||||||||||||||||    
T  94 tgattatgatgaacactaacccccttaccttaattatc 131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 352
Target Start/End: Complemental strand, 41 - 4
Alignment:
Q  315 tgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||| || ||||||||||||||||||||||||    
T  41 tgattatgatgaacactaacccccttaccttaattatc 4  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 352
Target Start/End: Complemental strand, 6335 - 6298
Alignment:
Q  315 tgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||| || ||||||||||||||||||||||||    
T  6335 tgattatgatgaacactaacccccttaccttaattatc 6298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 256
Target Start/End: Complemental strand, 22463 - 22422
Alignment:
Q  215 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 256  Q
    |||||||||||||||||||||||| | || ||||||||||||    
T  22463 ttcatgcatacaaacatatcatcatatttagagcacgaattt 22422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 352
Target Start/End: Complemental strand, 19881 - 19844
Alignment:
Q  315 tgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||| || ||||||||||||||||||||||||    
T  19881 tgattatgatgaacactaacccccttaccttaattatc 19844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 352
Target Start/End: Complemental strand, 24185 - 24148
Alignment:
Q  315 tgattatgataaagactaacccccttaccttaattatc 352  Q
    |||||||||| || ||||||||||||||||||||||||    
T  24185 tgattatgatgaacactaacccccttaccttaattatc 24148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 2548 - 2612
Alignment:
Q  35 acccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatc 99  Q
    |||||||| |||| |||||||| |||| |||  |||||| ||||||||||||||| ||| |||||    
T  2548 acccaaaccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatc 2612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 10868 - 10908
Alignment:
Q  215 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 255  Q
    |||||||||||||||||||||||| || | |||||||||||    
T  10868 ttcatgcatacaaacatatcatcatagatagagcacgaatt 10908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 17241 - 17209
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  17241 atgattatgatgaagactaacccccttacctta 17209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 5508 - 5476
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  5508 atgattatgatgaagactaacccccttacctta 5476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 4378 - 4346
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||||||| |||||||||||||||||    
T  4378 atgattatgataaagtctaacccccttacctta 4346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 17336 - 17304
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||||||||||||||| |||||||||    
T  17336 atgattatgataaagactaacccgcttacctta 17304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 5549 - 5581
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  5549 atgattatgatgaagactaacccccttacctta 5581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 34340 - 34308
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    ||||||||||| |||||||||||||||||||||    
T  34340 atgattatgatgaagactaacccccttacctta 34308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 12450 - 12418
Alignment:
Q  314 atgattatgataaagactaacccccttacctta 346  Q
    |||||||||||||| ||||||||||||||||||    
T  12450 atgattatgataaaaactaacccccttacctta 12418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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