View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1655_low_7 (Length: 323)

Name: NF1655_low_7
Description: NF1655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1655_low_7
NF1655_low_7
[»] chr1 (46 HSPs)
chr1 (33-312)||(7042734-7043013)
chr1 (33-303)||(8969435-8969708)
chr1 (33-190)||(18604828-18604984)
chr1 (33-158)||(17926221-17926346)
chr1 (64-162)||(4490168-4490266)
chr1 (64-190)||(26770125-26770250)
chr1 (64-190)||(31760702-31760827)
chr1 (62-190)||(47533999-47534126)
chr1 (64-190)||(15475980-15476105)
chr1 (64-190)||(37094152-37094277)
chr1 (64-190)||(44054817-44054942)
chr1 (64-190)||(50490803-50490928)
chr1 (62-190)||(25828675-25828802)
chr1 (64-168)||(30361156-30361260)
chr1 (64-168)||(42885268-42885372)
chr1 (62-190)||(46674743-46674870)
chr1 (64-168)||(44234047-44234153)
chr1 (62-168)||(13556075-13556181)
chr1 (64-190)||(48542552-48542677)
chr1 (64-200)||(17580873-17581008)
chr1 (62-134)||(25729975-25730047)
chr1 (62-162)||(40359665-40359765)
chr1 (64-190)||(3770505-3770630)
chr1 (64-134)||(11335643-11335713)
chr1 (64-134)||(11493663-11493733)
chr1 (64-190)||(28226343-28226468)
chr1 (64-134)||(52469488-52469558)
chr1 (64-168)||(6978903-6979007)
chr1 (53-158)||(49740075-49740180)
chr1 (64-168)||(8895623-8895727)
chr1 (74-206)||(15907250-15907381)
chr1 (64-159)||(30159014-30159109)
chr1 (54-172)||(12320214-12320331)
chr1 (64-168)||(20599616-20599720)
chr1 (64-168)||(28068850-28068954)
chr1 (64-162)||(3046763-3046861)
chr1 (64-162)||(35719711-35719810)
chr1 (74-168)||(46234353-46234447)
chr1 (62-168)||(3416304-3416410)
chr1 (64-190)||(3994870-3994994)
chr1 (64-190)||(45502353-45502477)
chr1 (67-132)||(43106594-43106659)
chr1 (74-162)||(49456849-49456937)
chr1 (64-162)||(24180587-24180686)
chr1 (31-70)||(17136840-17136879)
chr1 (62-94)||(641456-641488)
[»] chr5 (23 HSPs)
chr5 (35-304)||(8935772-8936041)
chr5 (33-168)||(8782705-8782840)
chr5 (34-173)||(33570086-33570224)
chr5 (64-168)||(8836552-8836656)
chr5 (64-190)||(3390832-3390957)
chr5 (64-190)||(42675659-42675784)
chr5 (64-167)||(10691933-10692036)
chr5 (63-190)||(36484601-36484727)
chr5 (64-206)||(25031425-25031566)
chr5 (62-190)||(29296186-29296313)
chr5 (64-168)||(15472688-15472792)
chr5 (64-204)||(23191870-23192009)
chr5 (62-190)||(42221725-42221852)
chr5 (64-190)||(33591695-33591820)
chr5 (64-162)||(41743388-41743486)
chr5 (64-171)||(18185763-18185870)
chr5 (64-159)||(27771290-27771385)
chr5 (64-162)||(8335320-8335418)
chr5 (64-162)||(28349035-28349133)
chr5 (64-190)||(35066045-35066169)
chr5 (62-168)||(1420968-1421074)
chr5 (64-162)||(6230225-6230323)
chr5 (34-100)||(25472379-25472445)
[»] chr6 (27 HSPs)
chr6 (33-304)||(2559701-2559974)
chr6 (40-302)||(20554672-20554938)
chr6 (33-160)||(11590217-11590344)
chr6 (37-168)||(9576004-9576135)
chr6 (33-168)||(9224566-9224703)
chr6 (33-172)||(12713108-12713247)
chr6 (64-190)||(8062791-8062916)
chr6 (62-162)||(32938433-32938533)
chr6 (64-190)||(4169666-4169791)
chr6 (64-190)||(4210395-4210520)
chr6 (62-168)||(5545371-5545477)
chr6 (58-168)||(8313783-8313893)
chr6 (64-190)||(17595869-17595994)
chr6 (66-190)||(33131138-33131261)
chr6 (63-190)||(8933810-8933936)
chr6 (64-190)||(33489794-33489919)
chr6 (65-190)||(742856-742980)
chr6 (64-168)||(28914151-28914255)
chr6 (64-190)||(8658989-8659117)
chr6 (64-162)||(10790493-10790591)
chr6 (64-171)||(18676725-18676833)
chr6 (64-135)||(29516667-29516738)
chr6 (64-168)||(34475145-34475249)
chr6 (38-217)||(8978117-8978291)
chr6 (56-109)||(25144160-25144213)
chr6 (38-97)||(24418674-24418733)
chr6 (67-111)||(13889147-13889191)
[»] chr3 (53 HSPs)
chr3 (33-300)||(5218943-5219217)
chr3 (33-168)||(35513084-35513219)
chr3 (64-190)||(20607694-20607819)
chr3 (62-168)||(26717991-26718097)
chr3 (53-161)||(501729-501837)
chr3 (62-190)||(22497239-22497366)
chr3 (64-190)||(1546187-1546312)
chr3 (62-168)||(43218755-43218861)
chr3 (62-162)||(17338509-17338609)
chr3 (33-168)||(41454216-41454351)
chr3 (170-265)||(50744258-50744353)
chr3 (64-190)||(10471357-10471482)
chr3 (64-190)||(30357252-30357377)
chr3 (64-190)||(35846748-35846873)
chr3 (64-190)||(37126634-37126759)
chr3 (64-190)||(43973234-43973359)
chr3 (64-190)||(51754424-51754549)
chr3 (62-168)||(53018980-53019086)
chr3 (64-161)||(37821063-37821160)
chr3 (64-168)||(46528091-46528195)
chr3 (62-190)||(48458385-48458512)
chr3 (64-171)||(28555188-28555295)
chr3 (75-206)||(41114091-41114221)
chr3 (64-190)||(24348804-24348929)
chr3 (66-168)||(24405774-24405876)
chr3 (64-162)||(31655046-31655144)
chr3 (64-190)||(44377783-44377908)
chr3 (64-190)||(51167180-51167305)
chr3 (64-190)||(10049118-10049243)
chr3 (64-190)||(8828619-8828744)
chr3 (64-190)||(10659527-10659652)
chr3 (64-190)||(13286931-13287056)
chr3 (64-168)||(5273604-5273708)
chr3 (64-168)||(2445962-2446066)
chr3 (64-168)||(38252520-38252624)
chr3 (64-168)||(47697769-47697873)
chr3 (64-190)||(8068525-8068650)
chr3 (67-190)||(49804864-49804986)
chr3 (64-190)||(55274150-55274275)
chr3 (64-134)||(26229373-26229443)
chr3 (64-168)||(998342-998446)
chr3 (64-171)||(3019203-3019310)
chr3 (66-162)||(23150742-23150838)
chr3 (64-183)||(12227760-12227879)
chr3 (33-127)||(9126357-9126450)
chr3 (33-127)||(9134464-9134557)
chr3 (64-190)||(9745945-9746069)
chr3 (64-162)||(27449492-27449590)
chr3 (38-100)||(9116497-9116559)
chr3 (64-110)||(26975548-26975594)
chr3 (42-129)||(50744389-50744476)
chr3 (97-167)||(33591124-33591194)
chr3 (35-84)||(7027128-7027177)
[»] chr4 (39 HSPs)
chr4 (38-211)||(41476622-41476794)
chr4 (62-190)||(49332093-49332220)
chr4 (62-190)||(54202330-54202457)
chr4 (64-190)||(17445621-17445746)
chr4 (33-190)||(11308738-11308893)
chr4 (62-190)||(2491831-2491958)
chr4 (74-190)||(45884570-45884685)
chr4 (66-190)||(50621666-50621789)
chr4 (65-168)||(35949484-35949587)
chr4 (62-171)||(27767614-27767723)
chr4 (62-190)||(11005613-11005740)
chr4 (66-190)||(36308964-36309087)
chr4 (62-190)||(56162473-56162600)
chr4 (64-162)||(3875653-3875751)
chr4 (64-162)||(22169111-22169209)
chr4 (64-190)||(24744951-24745076)
chr4 (64-189)||(3874532-3874656)
chr4 (64-190)||(3931949-3932075)
chr4 (33-171)||(11381898-11382037)
chr4 (64-159)||(36225124-36225219)
chr4 (62-168)||(26488351-26488456)
chr4 (64-190)||(39677666-39677791)
chr4 (64-158)||(7327688-7327782)
chr4 (41-168)||(43957841-43957968)
chr4 (42-168)||(44878022-44878148)
chr4 (64-134)||(28573784-28573854)
chr4 (64-162)||(36432475-36432572)
chr4 (62-167)||(29933516-29933621)
chr4 (45-190)||(7326399-7326544)
chr4 (64-168)||(7554422-7554526)
chr4 (66-190)||(29923605-29923728)
chr4 (64-190)||(28867676-28867801)
chr4 (64-162)||(33961789-33961887)
chr4 (64-134)||(20492505-20492575)
chr4 (66-168)||(55541828-55541930)
chr4 (64-171)||(55282451-55282558)
chr4 (74-159)||(41764681-41764765)
chr4 (38-88)||(23115277-23115327)
chr4 (38-106)||(7818464-7818532)
[»] chr8 (29 HSPs)
chr8 (36-158)||(5458233-5458355)
chr8 (64-162)||(25487249-25487347)
chr8 (64-190)||(27719243-27719368)
chr8 (62-168)||(45084244-45084350)
chr8 (64-168)||(20818956-20819060)
chr8 (62-190)||(38098782-38098909)
chr8 (64-190)||(35393519-35393644)
chr8 (34-171)||(1104960-1105097)
chr8 (64-168)||(26416318-26416422)
chr8 (64-162)||(8352381-8352479)
chr8 (64-190)||(30700014-30700139)
chr8 (66-190)||(30655004-30655127)
chr8 (64-162)||(12986672-12986770)
chr8 (33-171)||(13174207-13174346)
chr8 (64-190)||(483155-483280)
chr8 (64-190)||(11020404-11020529)
chr8 (64-206)||(24757750-24757890)
chr8 (64-190)||(29997495-29997620)
chr8 (64-168)||(36781653-36781757)
chr8 (36-190)||(18574772-18574920)
chr8 (64-168)||(20187473-20187577)
chr8 (64-168)||(20206542-20206646)
chr8 (64-190)||(33411046-33411172)
chr8 (64-162)||(39780313-39780412)
chr8 (64-134)||(31097516-31097586)
chr8 (66-162)||(32834592-32834688)
chr8 (90-248)||(20524969-20525125)
chr8 (54-111)||(29225977-29226034)
chr8 (38-108)||(16584399-16584468)
[»] chr2 (30 HSPs)
chr2 (62-190)||(2380291-2380418)
chr2 (64-206)||(33965429-33965570)
chr2 (64-190)||(26479852-26479977)
chr2 (62-190)||(19390571-19390698)
chr2 (167-303)||(18375744-18375884)
chr2 (62-168)||(12242742-12242848)
chr2 (64-190)||(21866983-21867108)
chr2 (64-190)||(25336526-25336651)
chr2 (66-190)||(39430259-39430382)
chr2 (64-168)||(4049461-4049564)
chr2 (64-190)||(41568706-41568831)
chr2 (64-162)||(8113689-8113787)
chr2 (64-190)||(11124333-11124458)
chr2 (64-190)||(14287451-14287576)
chr2 (64-190)||(30787143-30787268)
chr2 (66-190)||(2357341-2357464)
chr2 (167-304)||(18924990-18925130)
chr2 (64-206)||(2372076-2372217)
chr2 (64-190)||(20115063-20115188)
chr2 (64-162)||(31547301-31547399)
chr2 (64-168)||(17977767-17977872)
chr2 (64-206)||(11978764-11978905)
chr2 (64-162)||(6034413-6034512)
chr2 (66-162)||(1222650-1222746)
chr2 (38-100)||(43652906-43652968)
chr2 (64-108)||(17435356-17435400)
chr2 (60-113)||(932072-932125)
chr2 (170-263)||(9729418-9729511)
chr2 (60-112)||(9141715-9141767)
chr2 (65-109)||(35006464-35006508)
[»] scaffold0081 (1 HSPs)
scaffold0081 (33-164)||(11081-11212)
[»] chr7 (27 HSPs)
chr7 (62-190)||(40431280-40431407)
chr7 (64-186)||(47020478-47020599)
chr7 (62-190)||(42076334-42076461)
chr7 (33-168)||(3112101-3112236)
chr7 (64-190)||(3887672-3887797)
chr7 (64-190)||(5544309-5544434)
chr7 (64-190)||(9741231-9741356)
chr7 (64-190)||(18676761-18676886)
chr7 (64-190)||(31587923-31588048)
chr7 (62-168)||(42697406-42697512)
chr7 (64-168)||(47455052-47455156)
chr7 (64-168)||(30888418-30888522)
chr7 (66-162)||(31621940-31622036)
chr7 (64-190)||(44508505-44508631)
chr7 (64-190)||(12726223-12726348)
chr7 (64-168)||(44291054-44291158)
chr7 (64-159)||(9870437-9870532)
chr7 (72-190)||(44061818-44061935)
chr7 (64-190)||(12848442-12848567)
chr7 (64-190)||(41118782-41118907)
chr7 (34-113)||(38168128-38168207)
chr7 (64-190)||(40186711-40186836)
chr7 (74-134)||(40190129-40190188)
chr7 (64-115)||(38743302-38743353)
chr7 (33-100)||(39494855-39494922)
chr7 (53-168)||(27419059-27419174)
chr7 (65-113)||(37544993-37545041)
[»] scaffold0548 (1 HSPs)
scaffold0548 (33-190)||(5228-5383)
[»] scaffold0189 (1 HSPs)
scaffold0189 (62-168)||(27833-27939)
[»] scaffold0562 (2 HSPs)
scaffold0562 (64-162)||(6472-6570)
scaffold0562 (64-189)||(5351-5475)
[»] scaffold1360 (1 HSPs)
scaffold1360 (64-190)||(944-1070)
[»] scaffold0025 (1 HSPs)
scaffold0025 (64-136)||(20394-20466)
[»] scaffold0041 (1 HSPs)
scaffold0041 (64-190)||(105706-105831)
[»] scaffold0057 (1 HSPs)
scaffold0057 (64-190)||(42682-42804)


Alignment Details
Target: chr1 (Bit Score: 240; Significance: 1e-133; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 33 - 312
Target Start/End: Complemental strand, 7043013 - 7042734
Alignment:
Q  33 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 132  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||    
T  7043013 gactctttctagtctcaccccatataattctagttacacctaaatttatttaaaatcttacaataataccaaaattgccctcttcatgtaaatttctaaa 7042914  T
Q  133 aatcattctttcattatcattctgaaccctcacccctttttcacccacaaaccaccatgaatatgcaatcaatacctacaaaaatcatcaattgaatcaa 232  Q
    || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7042913 aaccattctttcattatcattttgaaccctcacccctttttcacccacaaaccaccatggatatgcaatcaatacctacaaaaatcatcaattgaatcaa 7042814  T
Q  233 catctattccattgataagtactcgattcatacgagtgaatttcgtaaatttcttcgagtttctatttatcgaccctatg 312  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  7042813 catctattccattgataagtactcgattcatacgagtgaatttcataaatttcttcgagtttctatttatcggccctatg 7042734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 33 - 303
Target Start/End: Original strand, 8969435 - 8969708
Alignment:
Q  33 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 132  Q
    |||||||| |||||| |  ||||||||||||||||| || |||||||||||||||| |||||||||||  ||||||  ||||||| ||||||||||||||    
T  8969435 gactctttttagtcttatcccatataattctagttatactcaaatttatttaaaattttacaataatactaaaatttccctcttcatgtaaatttctaaa 8969534  T
Q  133 aatcattctttcattatcattctgaaccctcacccctttttcacccacaaaccaccatgaatatgcaatcaatacctacaaaaatcatcaattgaatcaa 232  Q
    |||| ||||||||||||||||||||||||||||||| ||||| | |||||||||||||  ||||||||||||||||||| ||||||  ||||||||||||    
T  8969535 aatccttctttcattatcattctgaaccctcacccc-ttttctcgcacaaaccaccatagatatgcaatcaatacctactaaaatcgccaattgaatcaa 8969633  T
Q  233 catctattccattgataagtactcgattcatac----gagtgaatttcgtaaatttcttcgagtttctatttatc 303  Q
    ||||| ||||||||||| |||||||||||||||     |||||||||| ||||||||| ||| ||||||||||||    
T  8969634 catctcttccattgatacgtactcgattcatacaagtaagtgaatttcataaatttctccgaatttctatttatc 8969708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 33 - 190
Target Start/End: Original strand, 18604828 - 18604984
Alignment:
Q  33 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 132  Q
    ||||||| |||||||||| |||||||||||| |||||||| ||||||||||||||| ||||||||||| |||||||| ||||||| |||||||| |||||    
T  18604828 gactcttgctagtctcaccccatataattctggttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaattactaaa 18604927  T
Q  133 aatcattctttcattatcattctgaaccctcacccctttttcacccacaaaccaccat 190  Q
    || |  ||||| || |||||||||||||||||||||  ||||| ||||||| ||||||    
T  18604928 aacccatcttttatgatcattctgaaccctcacccc-atttcatccacaaatcaccat 18604984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 33 - 158
Target Start/End: Complemental strand, 17926346 - 17926221
Alignment:
Q  33 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 132  Q
    ||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| | ||| ||||||||||||||    
T  17926346 gactcttgctactctcaccccatataattctagttacacccaaatttatttaaaattttacaataataccaaaattgtcatgttcgtgtaaatttctaaa 17926247  T
Q  133 aatcattctttcattatcattctgaa 158  Q
    || |  ||||| || |||||||||||    
T  17926246 aacccatcttttatgatcattctgaa 17926221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 64 - 162
Target Start/End: Complemental strand, 4490266 - 4490168
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 162  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||| || |||||||||||||||    
T  4490266 agttacacccaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttctaaaaactca-tcttttatgatcattctgaaccct 4490168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 26770250 - 26770125
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| |||||||||||||||| |  ||||| || |||||||||||||||     
T  26770250 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccctt 26770151  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  26770150 acccc-ctttcatccacaaatcaccat 26770125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 31760827 - 31760702
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    |||||||| |||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||| |  ||||| || |||||||||||||||     
T  31760827 agttacactcaaatttatttaaaattttacaataatataaaaattgtcctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccctt 31760728  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  31760727 acccc-ctttcatccacaaatcaccat 31760702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 62 - 190
Target Start/End: Original strand, 47533999 - 47534126
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| |  ||||| || ||| ||||||||||    
T  47533999 ctagttacactcaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccc 47534098  T
Q  162 tcacccctttttcacccacaaaccaccat 190  Q
    | |||||  ||||| ||||||| ||||||    
T  47534099 ttacccc-ctttcatccacaaatcaccat 47534126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 15476105 - 15475980
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| |||||||||||  ||||||| ||||||| ||||||||| |||||| |  ||||| ||||||||||||||||||     
T  15476105 agttacacccaaatttatttaaaattttacaataatacaaaaattgccctcttcatgtaaatttttaaaaacccatcttttattatcattctgaaccctt 15476006  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  15476005 acccc-ctttcatccacaaatcaccat 15475980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 37094277 - 37094152
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||| |  ||||| |  |||||||||||||||     
T  37094277 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccctcttttacgatcattctgaaccctt 37094178  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  37094177 acccc-ctttcatccacaaatcaccat 37094152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 44054942 - 44054817
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||| ||||||| |||||||||||||||| |  ||||| || |||||| ||||||||     
T  44054942 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattttgaaccctt 44054843  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    ||||| |||||| ||||||| ||||||    
T  44054842 acccc-ttttcatccacaaatcaccat 44054817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 50490803 - 50490928
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  50490803 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 50490902  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  50490903 acccc-ctttcatccacaaatcaccat 50490928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 62 - 190
Target Start/End: Original strand, 25828675 - 25828802
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaacc 160  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| ||| ||||| || |||||||||||||    
T  25828675 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaactca-tcttttatgatcattctgaacc 25828773  T
Q  161 ctcacccctttttcacccacaaaccaccat 190  Q
    || |||||  ||||| ||||||| ||||||    
T  25828774 cttacccc-ctttcatccacaaatcaccat 25828802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 30361156 - 30361260
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    |||||||  |||||||||||||||| ||||||||||||||||||||  |||||| ||||||||||||||||||  ||||| || |||||||||||||||     
T  30361156 agttacattcaaatttatttaaaattttacaataatatcaaaattgctctcttcatgtaaatttctaaaaatccatcttttatgatcattctgaaccctt 30361255  T
Q  164 acccc 168  Q
    |||||    
T  30361256 acccc 30361260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 42885268 - 42885372
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| |||||||||||  ||||||||||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  42885268 agttacacccaaatttatttaaaattttacaataatacaaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 42885367  T
Q  164 acccc 168  Q
    |||||    
T  42885368 acccc 42885372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 62 - 190
Target Start/End: Original strand, 46674743 - 46674870
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||  |  ||||| || ||||||||||||||    
T  46674743 ctagttacacctaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaatcccatcttttatgatcattctgaaccc 46674842  T
Q  162 tcacccctttttcacccacaaaccaccat 190  Q
    | |||||  ||||| ||||||| ||||||    
T  46674843 ttacccc-ctttcatccacaaatcaccat 46674870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 44234153 - 44234047
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatat--caaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||||||||||||||||||||| ||||||||||||  |||||||| ||||||| |||||||||||||||| |  ||||| || ||||||||||||||    
T  44234153 agttacacccaaatttatttaaaattttacaataatataccaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccc 44234054  T
Q  162 tcacccc 168  Q
    | |||||    
T  44234053 ttacccc 44234047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 13556075 - 13556181
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||| ||||| |||||| |  ||||| || ||||||||||||||    
T  13556075 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtcaatttttaaaaacccatcttttatgatcattctgaaccc 13556174  T
Q  162 tcacccc 168  Q
    | |||||    
T  13556175 ttacccc 13556181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 48542677 - 48542552
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| ||||||    ||||| || |||||||||||||||     
T  48542677 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacacatcttttatgatcattctgaaccctt 48542578  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  48542577 acccc-ctttcatccacaaatcaccat 48542552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 64 - 200
Target Start/End: Complemental strand, 17581008 - 17580873
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||| ||||||||||||||||| ||||||||||| ||||||||| |||||| ||||| |||||||||| |  ||||| || |||||||||||| ||     
T  17581008 agttacatccaaatttatttaaaattttacaataataccaaaattgttctcttcatgtaattttctaaaaacctatcttttatgatcattctgaactctt 17580909  T
Q  164 acccctttttcacccacaaaccaccatgaatatgcaa 200  Q
    |||||  ||||| ||||||| ||||||  ||||||||    
T  17580908 acccc-ctttcatccacaaatcaccatagatatgcaa 17580873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 62 - 134
Target Start/End: Complemental strand, 25730047 - 25729975
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa 134  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| ||||||    
T  25730047 ctagttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaa 25729975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 40359665 - 40359765
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || ||| ||||||||||    
T  40359665 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccc 40359764  T
Q  162 t 162  Q
    |    
T  40359765 t 40359765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 3770505 - 3770630
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||| | ||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  3770505 agttacacctaaatttatttaaaattttacaataataccaaaattgccttcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 3770604  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  3770605 acccc-ctttcatccacaaatcaccat 3770630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 134
Target Start/End: Complemental strand, 11335713 - 11335643
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa 134  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| ||||||    
T  11335713 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaa 11335643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 134
Target Start/End: Complemental strand, 11493733 - 11493663
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa 134  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| ||||||    
T  11493733 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaa 11493663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 28226468 - 28226343
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || || ||||||||||||     
T  28226468 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgattattctgaaccctt 28226369  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  28226368 acccc-ctttcatccacaaatcaccat 28226343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 134
Target Start/End: Complemental strand, 52469558 - 52469488
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa 134  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| ||||||    
T  52469558 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaa 52469488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 6978903 - 6979007
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 162  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| | ||||| ||||||||| |||||| ||| ||||| || |||||||||||| ||    
T  6978903 agttacacccaaatttatttaaaattttacaataatatcaaaattgccttcttcatgtaaatttttaaaaactca-tcttttatgatcattctgaactct 6979001  T
Q  163 cacccc 168  Q
     |||||    
T  6979002 tacccc 6979007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 158
Target Start/End: Original strand, 49740075 - 49740180
Alignment:
Q  53 catataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcat 152  Q
    ||||||||||||||||||   ||||||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||| |  ||||  || |||||    
T  49740075 catataattctagttacatttaaatttatttaaaattttacaataatatcaaaattgtcatgttcatgtaaatttctaaaaacccatcttatataatcat 49740174  T
Q  153 tctgaa 158  Q
    ||||||    
T  49740175 tctgaa 49740180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 8895623 - 8895727
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| |||||||||||  ||||||||||||||| ||||||||| |||||| |  ||||| || |||||| ||||| ||     
T  8895623 agttacacccaaatttatttaaaattttacaataatactaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattatgaactctt 8895722  T
Q  164 acccc 168  Q
    |||||    
T  8895723 acccc 8895727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 206
Target Start/End: Original strand, 15907250 - 15907381
Alignment:
Q  74 aaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctcaccccttttt 173  Q
    ||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||| |||||||| |||||  |||    
T  15907250 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattttgaacccttacccc-cttt 15907348  T
Q  174 cacccacaaaccaccatgaatatgcaatcaata 206  Q
    || ||||||| ||||||  || |||||||||||    
T  15907349 catccacaaatcaccatagatgtgcaatcaata 15907381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 159
Target Start/End: Original strand, 30159014 - 30159109
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaac 159  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||||| ||| ||||| || ||||||||||||    
T  30159014 agttacacctaaatttatttaaaattttacaataatatcaaaattgtcatcttcatgtaaatttttaaaaactca-tcttttatgatcattctgaac 30159109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 172
Target Start/End: Complemental strand, 12320331 - 12320214
Alignment:
Q  54 atataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcatt 153  Q
    ||||||||||||||||||  ||||||| ||||||| |||||||||||||||||||||| |||   ||||||||| | |||||| || ||||||||||| |    
T  12320331 atataattctagttacacttaaatttacttaaaattttacaataatatcaaaattgtcttctcaatgtaaattt-ttaaaatctttttttcattatcact 12320233  T
Q  154 ctgaaccctcacccctttt 172  Q
     |||||| ||| |||||||    
T  12320232 ttgaaccttcatccctttt 12320214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 20599720 - 20599616
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| |||||||||||  |||||||| |||||| ||||||||| ||||||    | ||| || |||||||||||||||     
T  20599720 agttacacccaaatttatttaaaattttacaataatactaaaattgttctcttcatgtaaatttttaaaaacttatattttatgatcattctgaaccctt 20599621  T
Q  164 acccc 168  Q
    |||||    
T  20599620 acccc 20599616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 28068954 - 28068850
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||  ||||||||||||||| ||||||||||| |||| ||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  28068954 agttacacataaatttatttaaaattttacaataataccaaacttgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 28068855  T
Q  164 acccc 168  Q
    |||||    
T  28068854 acccc 28068850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 162
Target Start/End: Original strand, 3046763 - 3046861
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 162  Q
    ||||||| | ||||||||||||||| |||||||||||| ||||||| ||||||| ||||||||| |||||| ||| ||||| || |||||||||||||||    
T  3046763 agttacatctaaatttatttaaaattttacaataatattaaaattgccctcttcatgtaaatttttaaaaactca-tcttttatgatcattctgaaccct 3046861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 162
Target Start/End: Original strand, 35719711 - 35719810
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 162  Q
    ||||||||||||||||||||||||| ||| ||||||| |||||||| ||||||| ||||||||| ||||||  |  ||||| || |||||||||||||||    
T  35719711 agttacacccaaatttatttaaaattttataataataccaaaattgccctcttcatgtaaatttttaaaaaccccatcttttatgatcattctgaaccct 35719810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 46234447 - 46234353
Alignment:
Q  74 aaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccctcacccc 168  Q
    ||||||||||||||| |||||||||||  ||||||||||||||| ||||||||| |||||| ||| ||||| || ||||||||||||||| |||||    
T  46234447 aaatttatttaaaattttacaataatactaaaattgtcctcttcatgtaaatttttaaaaactca-tcttttatgatcattctgaacccttacccc 46234353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 3416304 - 3416410
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||| | ||||||||||||||||| ||||||||||| |||||| | ||||||| ||||||||| |||||| |  ||||| || |||||| |||||||    
T  3416304 ctagttatatccaaatttatttaaaattttacaataataccaaaatcgccctcttcatgtaaatttttaaaaacccatcttttatgatcattatgaaccc 3416403  T
Q  162 tcacccc 168  Q
    | |||||    
T  3416404 ttacccc 3416410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 3994994 - 3994870
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| | |||||||| ||||| || |||||| |||||| |  ||||| || |||||||||||| ||     
T  3994994 agttacacccaaatttatttaaaattttacaataata-ccaaattgtcatcttcatgaaaatttttaaaaacccatcttttatgatcattctgaacactt 3994896  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  3994895 acccc-ctttcatccacaaatcaccat 3994870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 45502477 - 45502353
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||| ||||| | ||| ||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  45502477 agttacacccaaatttaattaaatt-ttataataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 45502379  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  45502378 acccc-ctttcatccacaaatcaccat 45502353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 43106659 - 43106594
Alignment:
Q  67 tacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 132  Q
    ||||| |||||||||||||||| ||||||||||||||||| |||||||||| ||||||||| ||||    
T  43106659 tacactcaaatttatttaaaattttacaataatatcaaaagtgtcctcttcatgtaaatttttaaa 43106594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 74 - 162
Target Start/End: Original strand, 49456849 - 49456937
Alignment:
Q  74 aaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 162  Q
    ||||||||||||||| |||||||||||  |||||| |||||||| ||||||||| |||||||   ||||| || |||||||||||||||    
T  49456849 aaatttatttaaaattttacaataatactaaaattatcctcttcatgtaaatttttaaaaattcatcttttatgatcattctgaaccct 49456937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 64 - 162
Target Start/End: Complemental strand, 24180686 - 24180587
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 162  Q
    ||||||||||||||||||||||||| ||| ||||||| |||||||| ||| ||| ||||||||| ||||||  |  ||||| || |||||||||||||||    
T  24180686 agttacacccaaatttatttaaaattttataataataccaaaattgcccttttcatgtaaatttttaaaaaccccatcttttatgatcattctgaaccct 24180587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 70
Target Start/End: Original strand, 17136840 - 17136879
Alignment:
Q  31 tcgactctttctagtctcactccatataattctagttaca 70  Q
    ||||||||||||||||||| ||||||||||| ||||||||    
T  17136840 tcgactctttctagtctcattccatataattttagttaca 17136879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 94
Target Start/End: Original strand, 641456 - 641488
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttaca 94  Q
    ||||||||||||||||||||||||||| |||||    
T  641456 ctagttacacccaaatttatttaaaattttaca 641488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 222; Significance: 1e-122; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 35 - 304
Target Start/End: Complemental strand, 8936041 - 8935772
Alignment:
Q  35 ctctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa 134  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||    
T  8936041 ctctttctagtctcatcccatataattctagttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttctaaaaa 8935942  T
Q  135 tcattctttcattatcattctgaaccctcacccctttttcacccacaaaccaccatgaatatgcaatcaatacctacaaaaatcatcaattgaatcaaca 234  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||| |    
T  8935941 ccattctttcattatcattctgaaccctcatccctttttcacccacaaaccaccatggatatgaaatcaatacctacaaaaatcgtcaattgaatcaata 8935842  T
Q  235 tctattccattgataagtactcgattcatacgagtgaatttcgtaaatttcttcgagtttctatttatcg 304  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8935841 tctattccattgataagtactcgattcatacgagtgaatttcataaatttcttcgagtttctatttatcg 8935772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 33 - 168
Target Start/End: Complemental strand, 8782840 - 8782705
Alignment:
Q  33 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 132  Q
    ||||||| |||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||| | ||| ||||||||||||||    
T  8782840 gactcttgctagtctcatcccatataattctagttacacccaaatttatttaaaattttacaataatactaaaattgtcttgttcatgtaaatttctaaa 8782741  T
Q  133 aatcattctttcattatcattctgaaccctcacccc 168  Q
    || |  |||||||| |||||||||||  ||||||||    
T  8782740 aacccatctttcatgatcattctgaattctcacccc 8782705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 34 - 173
Target Start/End: Complemental strand, 33570224 - 33570086
Alignment:
Q  34 actctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaa 133  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||| | ||| |||||||||||||||    
T  33570224 actcttactagtctcac-ccatatgattctagttacacccaaatttatttaaaattttacaataataccaaaattgtcatgttcatgtaaatttctaaaa 33570126  T
Q  134 atcattctttcattatcattctgaaccctcaccccttttt 173  Q
    | |   |||| || |||||||||||  |||||||| ||||    
T  33570125 acccaccttttatgatcattctgaattctcaccccctttt 33570086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 8836656 - 8836552
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  8836656 agttacacctaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 8836557  T
Q  164 acccc 168  Q
    |||||    
T  8836556 acccc 8836552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 3390957 - 3390832
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  3390957 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 3390858  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  3390857 acccc-ctttcatccacaaatcaccat 3390832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 42675784 - 42675659
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| |||||||   ||||| || |||||||||||||||     
T  42675784 agttacacctaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtaaatttttaaaaattcatcttttatgatcattctgaaccctt 42675685  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  42675684 acccc-ctttcatccacaaatcaccat 42675659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 64 - 167
Target Start/End: Complemental strand, 10692036 - 10691933
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  10692036 agttacacctaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 10691937  T
Q  164 accc 167  Q
    ||||    
T  10691936 accc 10691933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 190
Target Start/End: Complemental strand, 36484727 - 36484601
Alignment:
Q  63 tagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 162  Q
    |||||||||| ||||||||||||| | ||||||||||| |||||||||||| ||| ||||||||| ||||||||  ||||| || |||||||||||||||    
T  36484727 tagttacacctaaatttatttaaatttttacaataataccaaaattgtccttttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 36484628  T
Q  163 cacccctttttcacccacaaaccaccat 190  Q
     |||||  ||||| ||||||| ||||||    
T  36484627 tacccc-ctttcatccacaaatcaccat 36484601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 64 - 206
Target Start/End: Original strand, 25031425 - 25031566
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||  |||||| ||||||||| |||||| |  ||||| || ||||||||||| |||     
T  25031425 agttacacccaaatttatttaaaattttacaataatatcaaaattgcactcttcatgtaaatttttaaaaacccatcttttatgatcattctgaatcctt 25031524  T
Q  164 acccctttttcacccacaaaccaccatgaatatgcaatcaata 206  Q
    |||||  ||||| ||||||| |||| |  |||||||| |||||    
T  25031525 acccc-ctttcatccacaaatcaccgtagatatgcaaccaata 25031566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 62 - 190
Target Start/End: Original strand, 29296186 - 29296313
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaacc 160  Q
    ||||||||| | ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| ||| ||||| || ||||||||||||     
T  29296186 ctagttacatctaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttttaaaaactca-tcttttatgatcattctgaact 29296284  T
Q  161 ctcacccctttttcacccacaaaccaccat 190  Q
    || | |||| ||||| ||||||| ||||||    
T  29296285 ctta-ccctctttcatccacaaatcaccat 29296313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 15472792 - 15472688
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||| ||||| ||||||||| |||||| |  ||||| || |||| ||||||||||     
T  15472792 agttacacccaaatttatttaaaattttacaataataccaaaattgtcttcttcatgtaaatttttaaaaacccatcttttatgatcaatctgaaccctt 15472693  T
Q  164 acccc 168  Q
    |||||    
T  15472692 acccc 15472688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 64 - 204
Target Start/End: Complemental strand, 23192009 - 23191870
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    |||||||||||||||| |||||||| ||| |||||||  ||||||| ||||||| |||||||||||||||| |  ||||| || |||||||||||||||     
T  23192009 agttacacccaaatttgtttaaaattttataataatactaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccctt 23191910  T
Q  164 acccctttttcacccacaaaccaccatgaatatgcaatcaa 204  Q
    |||||  ||||| ||||||| ||||||  || |||||||||    
T  23191909 acccc-ctttcatccacaaatcaccatagatgtgcaatcaa 23191870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 62 - 190
Target Start/End: Original strand, 42221725 - 42221852
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    |||||||||| |||||||||||||||| ||||||||||| ||||||||  |||||| ||||||||| |||||| |  ||||| || ||||||||||||||    
T  42221725 ctagttacactcaaatttatttaaaattttacaataataccaaaattgcactcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccc 42221824  T
Q  162 tcacccctttttcacccacaaaccaccat 190  Q
    | |||||  ||||| ||||||| ||||||    
T  42221825 ttacccc-ctttcatccacaaatcaccat 42221852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 33591820 - 33591695
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || ||||||||||| |||     
T  33591820 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaatcctt 33591721  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  33591720 acccc-ctttcatccacaaatcaccat 33591695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 162
Target Start/End: Complemental strand, 41743486 - 41743388
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 162  Q
    ||||||| ||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||||   ||||| || |||||| ||||||||    
T  41743486 agttacatccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaattcatcttttatgatcattttgaaccct 41743388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 64 - 171
Target Start/End: Original strand, 18185763 - 18185870
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||| ||||| ||     
T  18185763 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattttgaactctt 18185862  T
Q  164 accccttt 171  Q
    ||||||||    
T  18185863 accccttt 18185870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 64 - 159
Target Start/End: Complemental strand, 27771385 - 27771290
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaac 159  Q
    ||||||| ||||||||||||||||| | ||||||||| |||||||||| ||||| |||||||||||||||| |  ||||| || ||||||||||||    
T  27771385 agttacatccaaatttatttaaaatttaacaataataccaaaattgtcatcttcatgtaaatttctaaaaacccatcttttatgatcattctgaac 27771290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 162
Target Start/End: Original strand, 8335320 - 8335418
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 162  Q
    ||||||||  ||||||||||||||| ||||||||||||||||||||  |||||| ||||||||| |||||| |  ||||| || |||||||||||||||    
T  8335320 agttacacttaaatttatttaaaattttacaataatatcaaaattgctctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 8335418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 162
Target Start/End: Original strand, 28349035 - 28349133
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 162  Q
    ||||||||| ||||||||||||||| | ||||||||| |||||||||| ||||| |||||||||||||||| |  ||||| || || ||||||||||||    
T  28349035 agttacacctaaatttatttaaaatttaacaataataccaaaattgtcatcttcatgtaaatttctaaaaacccatcttttatgatgattctgaaccct 28349133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 35066169 - 35066045
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||  |||||| ||||||||| |||||| |  | ||| || |||||||||||||||     
T  35066169 agttacacccaaatttatttaaaattttacaataataccaaaattgctctcttcatgtaaatttttaaaaacccat-ttttatgatcattctgaaccctt 35066071  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  35066070 acccc-ctttcatccacaaatcaccat 35066045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 1420968 - 1421074
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||||  ||||||||||||||||| ||||||||||| |||||||| ||| ||| |||||| || |||||| |  ||||| || ||||||||||||||    
T  1420968 ctagttacctccaaatttatttaaaattttacaataataccaaaattgcccttttcatgtaaaattttaaaaacccatcttttatgatcattctgaaccc 1421067  T
Q  162 tcacccc 168  Q
    | |||||    
T  1421068 ttacccc 1421074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 64 - 162
Target Start/End: Original strand, 6230225 - 6230323
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 162  Q
    ||||||||  ||||||||||||||| |||||||||||| ||||||| ||||||| ||||||||| |||||| ||| | ||| || |||||||||||||||    
T  6230225 agttacacttaaatttatttaaaattttacaataatattaaaattgccctcttcatgtaaatttttaaaaactca-tattttatgatcattctgaaccct 6230323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 25472445 - 25472379
Alignment:
Q  34 actctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataata 100  Q
    |||||||||| |||||| ||||||| || |||||||||||||||||||||||||| ||| |||||||    
T  25472445 actctttctaatctcaccccatatagttttagttacacccaaatttatttaaaattttataataata 25472379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 163; Significance: 5e-87; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 33 - 304
Target Start/End: Original strand, 2559701 - 2559974
Alignment:
Q  33 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 132  Q
    |||||||||||||||| | ||||||||||||||||||||| ||||||||||||||| ||| ||||||| |||||||| ||||||| ||| ||||||||||    
T  2559701 gactctttctagtctcgccccatataattctagttacaccaaaatttatttaaaattttataataataccaaaattgccctcttcatgtcaatttctaaa 2559800  T
Q  133 aatcattctttcattatcattctgaaccctcacccctttttcacccacaaaccaccatgaatatgcaatcaatacctacaaaaatcatcaattgaatcaa 232  Q
    |||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||  ||||||   |||||||||||    
T  2559801 aatc-ttctttcattatcattttgaaccctcacccc-ttttcacccacaaaccaccatggatatgcaatcaatacctaataaaatcgctaattgaatcaa 2559898  T
Q  233 catctattccattgataagtactcgattcatacgag----tgaatttcgtaaatttcttcgagtttctatttatcg 304  Q
    ||||| ||||||||||| ||||||||||||||| ||    |||||||| |||||||||||||||||||||||||||    
T  2559899 catctcttccattgatatgtactcgattcatacaagtaaatgaatttcataaatttcttcgagtttctatttatcg 2559974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 40 - 302
Target Start/End: Complemental strand, 20554938 - 20554672
Alignment:
Q  40 tctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcatt 139  Q
    ||||||||||| ||||||||||||||||||| | ||||||||||||||   ||||||||||  ||||||  ||||||| ||||||||||||||||   ||    
T  20554938 tctagtctcaccccatataattctagttacatctaaatttatttaaaactgtacaataatactaaaattaccctcttcatgtaaatttctaaaaactctt 20554839  T
Q  140 ctttcattatcattctgaaccctcacccctttttcacccacaaaccaccatgaatatgcaatcaatacctacaaaaatcatcaattgaatcaacatctat 239  Q
    |||||||||||||||||||| ||||||| |||||||| |||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| |    
T  20554838 ctttcattatcattctgaacgctcacccttttttcactcacaaaccaccatggatatgcaatcaatacctactaaaatcaccaattgaatcaacatctct 20554739  T
Q  240 tccattgataagtactcgattcatac----gagtgaatttcgtaaatttcttcgagtttctatttat 302  Q
    | |||||||| |||||||||||||||     |||||||||| |||||||  ||||||||||||||||    
T  20554738 ttcattgatacgtactcgattcatacaagtaagtgaatttcataaatttaatcgagtttctatttat 20554672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 33 - 160
Target Start/End: Original strand, 11590217 - 11590344
Alignment:
Q  33 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 132  Q
    |||| ||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||   |||||| ||||||||||||||    
T  11590217 gactatttctagtctcatcccatataattctagttacacccaaatttatttaaaattttacaataataccaaaattacactcttcatgtaaatttctaaa 11590316  T
Q  133 aatcattctttcattatcattctgaacc 160  Q
    |||| |||||||||||||||||||||||    
T  11590317 aatccttctttcattatcattctgaacc 11590344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 37 - 168
Target Start/End: Original strand, 9576004 - 9576135
Alignment:
Q  37 ctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatc 136  Q
    ||||||||| |||| |||||||||||||||||||| |||||||||||||||| |||||||||||  |||||||  ||| || |||||||||||||||| |    
T  9576004 ctttctagtttcaccccatataattctagttacacacaaatttatttaaaattttacaataatactaaaattgctctcatcatgtaaatttctaaaaacc 9576103  T
Q  137 attctttcattatcattctgaaccctcacccc 168  Q
     |||||||||||||||||||||||||||||||    
T  9576104 cttctttcattatcattctgaaccctcacccc 9576135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 33 - 168
Target Start/End: Original strand, 9224566 - 9224703
Alignment:
Q  33 gactctttctagtctcactccatataattctagttacaccc--aaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttcta 130  Q
    |||||||||||||||||| ||||||||||||||||||| |   ||||||||||||||| |||||| ||||||||||||||||||||| ||||||||| |     
T  9224566 gactctttctagtctcaccccatataattctagttacatctgaaaatttatttaaaattttacaacaatatcaaaattgtcctcttcatgtaaatttttt 9224665  T
Q  131 aaaatcattctttcattatcattctgaaccctcacccc 168  Q
    |||| | |||||||||||||||| ||||||||||||||    
T  9224666 aaaacccttctttcattatcattttgaaccctcacccc 9224703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 33 - 172
Target Start/End: Complemental strand, 12713247 - 12713108
Alignment:
Q  33 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 132  Q
    ||||||| ||||||||||  |||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||||||||    
T  12713247 gactcttgctagtctcacctcatataattctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaa 12713148  T
Q  133 aatcattctttcattatcattctgaaccctcacccctttt 172  Q
    |  |  ||||| || |||||||||||||||| ||||||||    
T  12713147 accccatcttttatgatcattctgaaccctcgcccctttt 12713108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 8062791 - 8062916
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||| ||||||| |||||||||||||||| ||||| |||||||||| |  ||||| || |||||||||||||||     
T  8062791 agttacacccaaatttatttaaaattttataataataccaaaattgtcctcttcatgtaattttctaaaaacccatcttttatgatcattctgaaccctt 8062890  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    ||||| |||||| ||||||| ||||||    
T  8062891 acccc-ttttcatccacaaatcaccat 8062916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 32938533 - 32938433
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| |||||||||||||||| |  ||||| || ||||||||||||||    
T  32938533 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccc 32938434  T
Q  162 t 162  Q
    |    
T  32938433 t 32938433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 4169666 - 4169791
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  4169666 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 4169765  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  4169766 acccc-ctttcatccacaaatcaccat 4169791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 4210395 - 4210520
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  4210395 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 4210494  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  4210495 acccc-ctttcatccacaaatcaccat 4210520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 5545371 - 5545477
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || ||||||||||||||    
T  5545371 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccc 5545470  T
Q  162 tcacccc 168  Q
    | |||||    
T  5545471 ttacccc 5545477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 58 - 168
Target Start/End: Complemental strand, 8313893 - 8313783
Alignment:
Q  58 aattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctga 157  Q
    |||| ||||||||| | ||||||| |||||| |||||||||||||| ||||||||||||| ||||||||| |||||| | || |||||||||||||| ||    
T  8313893 aattatagttacactcgaatttatataaaattttacaataatatcataattgtcctcttcatgtaaatttgtaaaaacctttatttcattatcattccga 8313794  T
Q  158 accctcacccc 168  Q
    |||||||||||    
T  8313793 accctcacccc 8313783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 17595994 - 17595869
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  17595994 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 17595895  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  17595894 acccc-ctttcatccacaaatcaccat 17595869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 66 - 190
Target Start/End: Complemental strand, 33131261 - 33131138
Alignment:
Q  66 ttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctcac 165  Q
    ||||||||||||||||||||| | |||||||||||  ||||||||||||||| ||||||||| ||||||||  ||||| || ||||||||||||||| ||    
T  33131261 ttacacccaaatttatttaaatttttacaataatactaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttac 33131162  T
Q  166 ccctttttcacccacaaaccaccat 190  Q
    |||  ||||| ||||||| ||||||    
T  33131161 ccc-ctttcatccacaaatcaccat 33131138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 190
Target Start/End: Complemental strand, 8933936 - 8933810
Alignment:
Q  63 tagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 162  Q
    |||||||||||||||||||||||||| |||| |||||| |||||||||||||||| ||||||||| |||||| |  ||||| || ||| |||||||||||    
T  8933936 tagttacacccaaatttatttaaaattttactataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccct 8933837  T
Q  163 cacccctttttcacccacaaaccaccat 190  Q
     |||||  ||||| ||||||| ||||||    
T  8933836 tacccc-ctttcatccacaaatcaccat 8933810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 33489794 - 33489919
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 162  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| ||| ||||| || |||||||||||||||    
T  33489794 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaactca-tcttttatgatcattctgaaccct 33489892  T
Q  163 cacccctttttcacccacaaaccaccat 190  Q
     |||||  ||||| ||||||| ||||||    
T  33489893 tacccc-ctttcatccacaaatcaccat 33489919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 65 - 190
Target Start/End: Complemental strand, 742980 - 742856
Alignment:
Q  65 gttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctca 164  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||  |||||| ||||||||| ||||||||  ||||| || ||||||||||||||| |    
T  742980 gttacactcaaatttatttaaaattttacaataataccaaaattgctctcttcgtgtaaatttttaaaaatccatcttttatgatcattctgaaccctta 742881  T
Q  165 cccctttttcacccacaaaccaccat 190  Q
    ||||  ||||| ||||||| ||||||    
T  742880 cccc-ctttcatccacaaatcaccat 742856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 28914255 - 28914151
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||   |||||| ||||||||| |||||| || ||||| || |||||||||||||||     
T  28914255 agttacacctaaatttatttaaaattttacaataatatcaaaattactctcttcatgtaaatttttaaaaaccaatcttttatgatcattctgaaccctt 28914156  T
Q  164 acccc 168  Q
    |||||    
T  28914155 acccc 28914151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 8658989 - 8659117
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcatt---atcattctgaacc 160  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||| |  ||||| |||   |||||| ||||||    
T  8658989 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatctttaattatgatcattttgaacc 8659088  T
Q  161 ctcacccctttttcacccacaaaccaccat 190  Q
    || |||||  ||||| ||||||| ||||||    
T  8659089 cttacccc-ctttcatccacaaatcaccat 8659117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 162
Target Start/End: Original strand, 10790493 - 10790591
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 162  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||||   ||||| || |||||||||||||||    
T  10790493 agttacaccaaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaattcatcttttatgatcattctgaaccct 10790591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 171
Target Start/End: Complemental strand, 18676833 - 18676725
Alignment:
Q  64 agttacacccaaatttatttaaaatctt-acaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 162  Q
    ||||||||| ||||||||||||||| || | ||||||| |||||||||||||||| ||||||||| |||||||   ||||| || |||||||||||||||    
T  18676833 agttacacctaaatttatttaaaatttttataataataccaaaattgtcctcttcatgtaaatttttaaaaattcatcttttatgatcattctgaaccct 18676734  T
Q  163 caccccttt 171  Q
     ||||||||    
T  18676733 taccccttt 18676725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 135
Target Start/End: Original strand, 29516667 - 29516738
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaat 135  Q
    ||||||| | ||||||||||||||| ||||||||||| |||||||| ||||||| |||||||||||||||||    
T  29516667 agttacatctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaat 29516738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 34475145 - 34475249
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 162  Q
    ||||||| | ||||||||||| ||| ||||||||||| |||||||| ||||||| ||||||||| |||||| ||| ||||| || |||||||||||||||    
T  34475145 agttacatctaaatttatttacaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaactca-tcttttatgatcattctgaaccct 34475243  T
Q  163 cacccc 168  Q
     |||||    
T  34475244 tacccc 34475249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 38 - 217
Target Start/End: Complemental strand, 8978291 - 8978117
Alignment:
Q  38 tttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatca 137  Q
    ||||||||||||  ||||| |||||||||||||   ||||||| ||||||| |||||||||||||  ||||   ||||   ||||||||| |  ||| |     
T  8978291 tttctagtctcatgccatacaattctagttacatttaaatttacttaaaattttacaataatatcgtaatt---ctctctgtgtaaattt-tctaaacct 8978196  T
Q  138 ttctttcattatcattctgaaccctcacccctttttcacccacaaaccaccatgaatatgcaatcaatacctacaaaaat 217  Q
    || ||||||||||| | |||||| ||||||||||| ||||||||||||| |||| |  ||||| |||||||||| |||||    
T  8978195 ttttttcattatcactttgaaccttcacccctttt-cacccacaaaccatcatggaagtgcaaccaatacctaccaaaat 8978117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 25144213 - 25144160
Alignment:
Q  56 ataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattg 109  Q
    |||||||||||||||| |||||||| ||||||| ||||||||||| ||||||||    
T  25144213 ataattctagttacactcaaatttacttaaaattttacaataataccaaaattg 25144160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 24418674 - 24418733
Alignment:
Q  38 tttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaata 97  Q
    ||||||||| ||| | ||||| |||||||||||||| |||||||||||||| ||| ||||    
T  24418674 tttctagtcgcaccctatatatttctagttacaccccaatttatttaaaattttagaata 24418733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 111
Target Start/End: Complemental strand, 13889191 - 13889147
Alignment:
Q  67 tacacccaaatttatttaaaatcttacaataatatcaaaattgtc 111  Q
    |||||| ||||||| ||||||| ||||||||||| ||||||||||    
T  13889191 tacacctaaatttacttaaaattttacaataataccaaaattgtc 13889147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 7e-49; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 33 - 300
Target Start/End: Original strand, 5218943 - 5219217
Alignment:
Q  33 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 132  Q
    |||||||||||||||||  ||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||| || || | | ||||||||||||    
T  5218943 gactctttctagtctcatcccatataattccagttacacccaaatttatttaaaattttacaataataccaaaattgccccctccatctaaatttctaaa 5219042  T
Q  133 aatcattctttcattatcattctgaa-------ccctcacccctttttcacccacaaaccaccatgaatatgcaatcaatacctacaaaaatcatcaatt 225  Q
     |   |||| ||||||||||||||||        |||||| ||| ||| ||||||||||||||||| |||||||||||||| |||| |       |||||    
T  5219043 gacacttctctcattatcattctgaaatctgattcctcactcctcttttacccacaaaccaccatggatatgcaatcaatatctacta----tgccaatt 5219138  T
Q  226 gaatcaacatctattccattgataagtactcgattcatac----gagtgaatttcgtaaatttcttcgagtttctattt 300  Q
    |||||||||||| ||||||||||| |||||||||||||||     |||||||||| ||||||| |||||||||||||||    
T  5219139 gaatcaacatctcttccattgatacgtactcgattcatacaagtaagtgaatttcataaatttattcgagtttctattt 5219217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 33 - 168
Target Start/End: Complemental strand, 35513219 - 35513084
Alignment:
Q  33 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 132  Q
    |||||||||||||||||   |||||||||||||||||| | ||||||||||||||| |||||||||||||||||||| ||||||| |||| |||| ||||    
T  35513219 gactctttctagtctcatctcatataattctagttacatctaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtagatttttaaa 35513120  T
Q  133 aatcattctttcattatcattctgaaccctcacccc 168  Q
    || | ||||||||||||||||||||||| |||||||    
T  35513119 aacccttctttcattatcattctgaaccttcacccc 35513084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 20607819 - 20607694
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  20607819 agttacacccaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 20607720  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  20607719 acccc-ctttcatccacaaatcaccat 20607694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 62 - 168
Target Start/End: Complemental strand, 26718097 - 26717991
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| ||||||||  ||||| || ||||||||||||||    
T  26718097 ctagttacacccaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 26717998  T
Q  162 tcacccc 168  Q
    | |||||    
T  26717997 ttacccc 26717991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 53 - 161
Target Start/End: Original strand, 501729 - 501837
Alignment:
Q  53 catataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatca 151  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||| ||| ||||| || ||||    
T  501729 catataattctagttacatccaaatttatttaaaattttacaataatatcaaaattgttctcttcatgtaaatttctaaaaactca-tcttttatgatca 501827  T
Q  152 ttctgaaccc 161  Q
    ||||||||||    
T  501828 ttctgaaccc 501837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 62 - 190
Target Start/End: Original strand, 22497239 - 22497366
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||||||||||||| ||||||||| ||||||||  ||||| || ||||||||||||||    
T  22497239 ctagttacacccaaatttatttaaatttttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 22497338  T
Q  162 tcacccctttttcacccacaaaccaccat 190  Q
    | |||||  ||||| ||||||| ||||||    
T  22497339 ttacccc-ctttcatccacaaatcaccat 22497366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 1546312 - 1546187
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  1546312 agttacacccaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 1546213  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  1546212 acccc-ctttcatccacaaatcaccat 1546187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 43218755 - 43218861
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||||||||||||| ||||||||| ||||||||  ||||| || ||||||||||||||    
T  43218755 ctagttacacccaaatttatttaaatttttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 43218854  T
Q  162 tcacccc 168  Q
    | |||||    
T  43218855 ttacccc 43218861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 17338609 - 17338509
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||||||||||||| ||||||||| ||||||||  ||||| || ||||||||||||||    
T  17338609 ctagttacacccaaatttatttaaatttttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 17338510  T
Q  162 t 162  Q
    |    
T  17338509 t 17338509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 33 - 168
Target Start/End: Original strand, 41454216 - 41454351
Alignment:
Q  33 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 132  Q
    ||||||| |||||||||  | |||||| |||||||||||| ||||||||||||||| ||||||||||| |||||||||| | ||| |||||||| |||||    
T  41454216 gactcttgctagtctcatcctatataagtctagttacacctaaatttatttaaaattttacaataataccaaaattgtctttttcatgtaaattactaaa 41454315  T
Q  133 aatcattctttcattatcattctgaaccctcacccc 168  Q
    || |  ||||| || ||||||||||||| |||||||    
T  41454316 aacccatcttttatgatcattctgaaccttcacccc 41454351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 170 - 265
Target Start/End: Complemental strand, 50744353 - 50744258
Alignment:
Q  170 ttttcacccacaaaccaccatgaatatgcaatcaatacctacaaaaatcatcaattgaatcaacatctattccattgataagtactcgattcatac 265  Q
    |||||||||| |||||||| || ||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||| |||||||||||||||    
T  50744353 ttttcacccagaaaccaccgtggatatgcaatcaatacctactaaaatcgccaattgaatcaacatctcttccattgatacgtactcgattcatac 50744258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 10471482 - 10471357
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||| |  ||||| || ||||||||||||| |     
T  10471482 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccttt 10471383  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  10471382 acccc-ctttcatccacaaatcaccat 10471357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 30357252 - 30357377
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| ||||||||  ||||| || |||||| ||||||||     
T  30357252 agttacacctaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 30357351  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  30357352 acccc-ctttcatccacaaatcaccat 30357377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 35846748 - 35846873
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  35846748 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 35846847  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  35846848 acccc-ctttcatccacaaatcaccat 35846873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 37126759 - 37126634
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  37126759 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 37126660  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  37126659 acccc-ctttcatccacaaatcaccat 37126634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 43973359 - 43973234
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||| ||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  43973359 agttatacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 43973260  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  43973259 acccc-ctttcatccacaaatcaccat 43973234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 51754424 - 51754549
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  51754424 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 51754523  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  51754524 acccc-ctttcatccacaaatcaccat 51754549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 53018980 - 53019086
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| | |||||| |  ||||| || ||| ||||||||||    
T  53018980 ctagttacacccaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatgtttaaaaacccatcttttatgatcgttctgaaccc 53019079  T
Q  162 tcacccc 168  Q
    | |||||    
T  53019080 ttacccc 53019086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 64 - 161
Target Start/End: Original strand, 37821063 - 37821160
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||||||||||||||||||||| ||| ||||||| |||||||||||||||| ||||||||| ||||||||  ||||| || ||||||||||||||    
T  37821063 agttacacccaaatttatttaaaattttataataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 37821160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 46528091 - 46528195
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  46528091 agttacacctaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 46528190  T
Q  164 acccc 168  Q
    |||||    
T  46528191 acccc 46528195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 62 - 190
Target Start/End: Original strand, 48458385 - 48458512
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || ||| ||||||||||    
T  48458385 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccc 48458484  T
Q  162 tcacccctttttcacccacaaaccaccat 190  Q
    | |||||  ||||| ||||||| ||||||    
T  48458485 ttacccc-ctttcatccacaaatcaccat 48458512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 64 - 171
Target Start/End: Complemental strand, 28555295 - 28555188
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||| ||||| ||||||||||||||||    ||||| || |||||||||||||||     
T  28555295 agttacacccaaatttatttaaaattttacaataataccaaaattgtcttcttcatgtaaatttctaaaaacttatcttttatgatcattctgaaccctt 28555196  T
Q  164 accccttt 171  Q
    ||| ||||    
T  28555195 acctcttt 28555188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 75 - 206
Target Start/End: Complemental strand, 41114221 - 41114091
Alignment:
Q  75 aatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctcacccctttttc 174  Q
    |||||||||||||| ||||||||||||||||||| |||||||| ||||||||| |||||||   ||||| || ||||||||||||||| |||||  ||||    
T  41114221 aatttatttaaaattttacaataatatcaaaattatcctcttcatgtaaatttttaaaaatttatcttttatgatcattctgaacccttacccc-ctttc 41114123  T
Q  175 acccacaaaccaccatgaatatgcaatcaata 206  Q
    | ||||||| ||||||  || |||||||||||    
T  41114122 atccacaaatcaccatagatgtgcaatcaata 41114091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 24348804 - 24348929
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| | ||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  24348804 agttacacccaaatttatttaaaattttacaataataccaaaattgccatcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 24348903  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  24348904 acccc-ctttcatccacaaatcaccat 24348929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 66 - 168
Target Start/End: Original strand, 24405774 - 24405876
Alignment:
Q  66 ttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctcac 165  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||| |  ||||| || ||||||||||||||| ||    
T  24405774 ttacatccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaacccttac 24405873  T
Q  166 ccc 168  Q
    |||    
T  24405874 ccc 24405876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 64 - 162
Target Start/End: Original strand, 31655046 - 31655144
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 162  Q
    ||||||||||||||||||||||||| | ||||||||| |||||||| ||||||| |||||||||||||||| |  ||||| || |||||||||||||||    
T  31655046 agttacacccaaatttatttaaaatttaacaataataccaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccct 31655144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 44377783 - 44377908
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||| ||||||||||||||| ||||||||||| ||||||||  |||||| ||||||||| ||||||||  ||||| || |||||||||||||||     
T  44377783 agttacacctaaatttatttaaaattttacaataataccaaaattgctctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 44377882  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  44377883 acccc-ctttcatccacaaatcaccat 44377908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 51167305 - 51167180
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||| ||||||||     
T  51167305 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattatgaaccctt 51167206  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  51167205 acccc-ctttcatccacaaatcaccat 51167180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 10049243 - 10049118
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 162  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| ||| ||||| || |||||| ||||||||    
T  10049243 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaactca-tcttttatgatcattatgaaccct 10049145  T
Q  163 cacccctttttcacccacaaaccaccat 190  Q
     | |||| ||||| ||||||| ||||||    
T  10049144 ta-ccctctttcatccacaaatcaccat 10049118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 8828744 - 8828619
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||| ||||||||||||||||| ||||||||||| ||||||||||||| || ||||||||| |||||| |  ||||| || |||||||||||| ||     
T  8828744 agttacatccaaatttatttaaaattttacaataataccaaaattgtcctcgtcatgtaaatttttaaaaacccatcttttatgatcattctgaactctt 8828645  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  8828644 acccc-ctttcatccacaaatcaccat 8828619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 10659527 - 10659652
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||| ||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| ||||||||  || || |  |||||||||||||||     
T  10659527 agttaaacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcgtttacgatcattctgaaccctt 10659626  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  10659627 acccc-ctttcatccacaaatcaccat 10659652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 13286931 - 13287056
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || || ||| ||||||||     
T  13286931 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgataattttgaaccctt 13287030  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  13287031 acccc-ctttcatccacaaatcaccat 13287056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 5273708 - 5273604
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 162  Q
    ||||||||||||||||||||||||| ||||||||||| | |||||| ||||||| ||||||||| |||||| ||| ||||| || |||||||||||||||    
T  5273708 agttacacccaaatttatttaaaattttacaataataccgaaattgccctcttcatgtaaatttttaaaaactca-tcttttatgatcattctgaaccct 5273610  T
Q  163 cacccc 168  Q
     |||||    
T  5273609 tacccc 5273604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 2445962 - 2446066
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||| ||| ||||| |||||| |  | ||| || |||||||||||||||     
T  2445962 agttacacctaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtgaatttttaaaaacccatattttatgatcattctgaaccctt 2446061  T
Q  164 acccc 168  Q
    |||||    
T  2446062 acccc 2446066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 38252520 - 38252624
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||| | ||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  38252520 agttacatctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 38252619  T
Q  164 acccc 168  Q
    |||||    
T  38252620 acccc 38252624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 47697769 - 47697873
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||  |||||| ||||||||| |||||| |  ||||| || |||| ||||||||||     
T  47697769 agttacacccaaatttatttaaaattttacaataataccaaaattgctctcttcatgtaaatttttaaaaacccatcttttatgatcaatctgaaccctt 47697868  T
Q  164 acccc 168  Q
    |||||    
T  47697869 acccc 47697873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 8068650 - 8068525
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttc-taaaaatcattctttcattatcattctgaaccct 162  Q
    ||||||||||||||||||||||||| ||||||||||| ||| |||| ||||||| |||||||||| ||||| ||| | ||| || || ||||||||||||    
T  8068650 agttacacccaaatttatttaaaattttacaataataccaagattgccctcttcatgtaaatttcttaaaactca-tattttatgattattctgaaccct 8068552  T
Q  163 cacccctttttcacccacaaaccaccat 190  Q
     ||||| |||||| ||||||| ||||||    
T  8068551 tacccc-ttttcatccacaaatcaccat 8068525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 67 - 190
Target Start/End: Complemental strand, 49804986 - 49804864
Alignment:
Q  67 tacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctcacc 166  Q
    |||| ||||||||||||||||| |||||||||||  ||||||||||||||| ||||||||| |||||| |  ||||| || ||| ||||||||||| |||    
T  49804986 tacatccaaatttatttaaaattttacaataatactaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaacccttacc 49804887  T
Q  167 cctttttcacccacaaaccaccat 190  Q
    ||  ||||| ||||||| ||||||    
T  49804886 cc-ctttcatccacaaatcaccat 49804864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 55274275 - 55274150
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 162  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| |||||| ||| ||||| || |||||| ||||| ||    
T  55274275 agttacatccaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtaaatttttaaaaactca-tcttttatgatcattatgaactct 55274177  T
Q  163 cacccctttttcacccacaaaccaccat 190  Q
     |||||  ||||| ||||||| ||||||    
T  55274176 tacccc-ctttcatccacaaatcaccat 55274150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 134
Target Start/End: Original strand, 26229373 - 26229443
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa 134  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||| | ||||||    
T  26229373 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatgtttaaaaa 26229443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 998446 - 998342
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||| ||||||||||||||||| |||||||||||  ||||||| | ||||| |||||||||||||||| |  | ||| || |||||||||||||||     
T  998446 agttacatccaaatttatttaaaattttacaataatactaaaattgccatcttcatgtaaatttctaaaaacccatgttttatgatcattctgaaccctt 998347  T
Q  164 acccc 168  Q
    |||||    
T  998346 acccc 998342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 64 - 171
Target Start/End: Original strand, 3019203 - 3019310
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 162  Q
    ||||||| | ||||||||||||||| |||||||||||| ||||||||| ||||| ||||||||| |||||| ||| ||||| || |||||||||||||||    
T  3019203 agttacatctaaatttatttaaaattttacaataatattaaaattgtcatcttcatgtaaatttttaaaaactca-tcttttataatcattctgaaccct 3019301  T
Q  163 caccccttt 171  Q
     | ||||||    
T  3019302 tatcccttt 3019310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 23150742 - 23150838
Alignment:
Q  66 ttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 162  Q
    ||||||||| ||||||||||||| ||| ||||||| |||||||| ||||||| ||||||||| ||||||||  ||||| || |||||||| ||||||    
T  23150742 ttacacccatatttatttaaaattttataataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctaaaccct 23150838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 183
Target Start/End: Complemental strand, 12227879 - 12227760
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||  ||||||||||||||| ||||||||||| |||||||| |||||||  |||||||| |||||| |  ||||| || || ||||||||||||     
T  12227879 agttacacttaaatttatttaaaattttacaataataccaaaattgccctcttcacgtaaatttttaaaaacccatcttttatgattattctgaaccctt 12227780  T
Q  164 acccctttttcacccacaaa 183  Q
    |||||  ||||| |||||||    
T  12227779 acccccctttcatccacaaa 12227760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 33 - 127
Target Start/End: Complemental strand, 9126450 - 9126357
Alignment:
Q  33 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaattt 127  Q
    |||| |||||||||||||  |||||||||||||||||||| ||||||| ||||||| ||||||||||| | |||||  ||||||| |||||||||    
T  9126450 gactttttctagtctcacatcatataattctagttacacctaaatttacttaaaattttacaataataccgaaatt-acctcttcatgtaaattt 9126357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 33 - 127
Target Start/End: Complemental strand, 9134557 - 9134464
Alignment:
Q  33 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaattt 127  Q
    |||| |||||||||||||  |||||||||||||||||||| ||||||| ||||||| ||||||||||| | |||||  ||||||| |||||||||    
T  9134557 gactttttctagtctcacatcatataattctagttacacctaaatttacttaaaattttacaataataccgaaatt-acctcttcatgtaaattt 9134464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 9745945 - 9746069
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    |||||||||| |||||||||||| | |||||||||||  ||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  9745945 agttacacccgaatttatttaaatt-ttacaataatactaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 9746043  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    ||||| |||| | ||||||| ||||||    
T  9746044 accccctttt-atccacaaatcaccat 9746069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 64 - 162
Target Start/End: Original strand, 27449492 - 27449590
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 162  Q
    ||||||| | ||||||||||||||| ||||||||||| |||||||  ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||    
T  27449492 agttacatctaaatttatttaaaattttacaataataccaaaatttccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 27449590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 9116559 - 9116497
Alignment:
Q  38 tttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataata 100  Q
    |||||||||||||  |||||||||||| ||||||||||||||| ||||||| |||||||||||    
T  9116559 tttctagtctcacatcatataattctaattacacccaaatttacttaaaattttacaataata 9116497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 110
Target Start/End: Complemental strand, 26975594 - 26975548
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgt 110  Q
    ||||||||| ||||||||||||||| |||| ||||||||||||||||    
T  26975594 agttacacctaaatttatttaaaattttactataatatcaaaattgt 26975548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 129
Target Start/End: Complemental strand, 50744476 - 50744389
Alignment:
Q  42 tagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttct 129  Q
    |||| |||| ||||||| |||||||||||||||| ||| |  ||||| ||||||||||||| ||| || ||||| | |||||| ||||    
T  50744476 tagtgtcaccccatatagttctagttacacccaattttttaaaaaattttacaataatatcgaaaatgccctctccatgtaaacttct 50744389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 33591124 - 33591194
Alignment:
Q  97 aatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctcaccc 167  Q
    |||| |||||||| ||||||| ||||||||| |||||| |  ||||| || ||||||||||||||| ||||    
T  33591124 aataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaacccttaccc 33591194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 7027177 - 7027128
Alignment:
Q  35 ctctttctagtctcactccatataattctagttacacccaaatttattta 84  Q
    |||||||||| ||||  ||||| |||||||||||||| ||||||||||||    
T  7027177 ctctttctagcctcatcccatacaattctagttacacacaaatttattta 7027128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 1e-38; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 38 - 211
Target Start/End: Complemental strand, 41476794 - 41476622
Alignment:
Q  38 tttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatca 137  Q
    ||||||||||||||||||||||||||| || |||||||||||| ||||||| ||||||  ||  ||||||||||||||   ||||||||||| |||| |     
T  41476794 tttctagtctcactccatataattctaattgcacccaaatttacttaaaattttacaacgatgccaaaattgtcctctctatgtaaatttcttaaaacct 41476695  T
Q  138 ttctttcattatcattctgaaccctcacccctttttcacccacaaaccaccatgaatatgcaatcaatacctac 211  Q
    || ||||||||||| | |||||| |||| || ||||||||||||||||||||||||| ||||| ||||||||||    
T  41476694 ttttttcattatcactttgaaccttcactcc-ttttcacccacaaaccaccatgaatgtgcaaccaatacctac 41476622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 62 - 190
Target Start/End: Complemental strand, 49332220 - 49332093
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||||||||||||| ||||||||| ||||||||  ||||| || ||||||||||||||    
T  49332220 ctagttacacccaaatttatttaaatttttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 49332121  T
Q  162 tcacccctttttcacccacaaaccaccat 190  Q
    | |||||  ||||| ||||||| ||||||    
T  49332120 ttacccc-ctttcatccacaaatcaccat 49332093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 62 - 190
Target Start/End: Original strand, 54202330 - 54202457
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||| |  ||||| || ||||||||||||||    
T  54202330 ctagttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccc 54202429  T
Q  162 tcacccctttttcacccacaaaccaccat 190  Q
    | |||||  ||||| ||||||| ||||||    
T  54202430 ttacccc-ctttcatccacaaatcaccat 54202457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 17445746 - 17445621
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||| |||||||| |||||||||||||||| |  ||||| || |||||||||||||||     
T  17445746 agttacacccaaatttatttaaaattttacaataataccaaaattatcctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccctt 17445647  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  17445646 acccc-ctttcatccacaaatcaccat 17445621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 33 - 190
Target Start/End: Original strand, 11308738 - 11308893
Alignment:
Q  33 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 132  Q
    ||||||| || ||||||| |||||||||||||||||||| |||||||||||||||| ||||||| ||| |||||||| ||| ||| ||||||||||||||    
T  11308738 gactcttgctggtctcac-ccatataattctagttacactcaaatttatttaaaattttacaattataccaaaattgccctgttcatgtaaatttctaaa 11308836  T
Q  133 aatcattctttcattatcattctgaaccctcacccctttttcacccacaaaccaccat 190  Q
    || |  ||||| || |||||||||||  ||||||||  ||||| ||||||| ||||||    
T  11308837 aacccatcttttatgatcattctgaattctcacccc-ctttcatccacaaatcaccat 11308893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 62 - 190
Target Start/End: Original strand, 2491831 - 2491958
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||| ||||||| ||||||||| |||||| |  ||||| || ||||||||||||||    
T  2491831 ctagttacacccaaatttatttaaaatttaacaataatatcaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccc 2491930  T
Q  162 tcacccctttttcacccacaaaccaccat 190  Q
    | |||||  ||||| ||||||| ||||||    
T  2491931 ttacccc-ctttcatccacaaatcaccat 2491958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 74 - 190
Target Start/End: Original strand, 45884570 - 45884685
Alignment:
Q  74 aaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctcaccccttttt 173  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||  ||||| || ||||||||||||||| |||||  |||    
T  45884570 aaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttacccc-cttt 45884668  T
Q  174 cacccacaaaccaccat 190  Q
    || ||||||| ||||||    
T  45884669 catccacaaatcaccat 45884685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 50621666 - 50621789
Alignment:
Q  66 ttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctcac 165  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||| |  ||||| || ||||||||||||||| ||    
T  50621666 ttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaacccttac 50621765  T
Q  166 ccctttttcacccacaaaccaccat 190  Q
    |||  ||||| ||||||| ||||||    
T  50621766 ccc-ctttcatccacaaatcaccat 50621789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 65 - 168
Target Start/End: Complemental strand, 35949587 - 35949484
Alignment:
Q  65 gttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctca 164  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||  ||||||||| ||||||||  ||||| || ||||||||||||||| |    
T  35949587 gttacacccaaatttatttaaaattttacaataataccaaaattgtcctctttatgtaaatttttaaaaatccatcttttatgatcattctgaaccctta 35949488  T
Q  165 cccc 168  Q
    ||||    
T  35949487 cccc 35949484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 62 - 171
Target Start/End: Complemental strand, 27767723 - 27767614
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || ||| ||||||||||    
T  27767723 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccc 27767624  T
Q  162 tcaccccttt 171  Q
    | ||||||||    
T  27767623 ttaccccttt 27767614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 62 - 190
Target Start/End: Complemental strand, 11005740 - 11005613
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||||||||||||||||||||||| | ||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || ||||||||||||||    
T  11005740 ctagttacacccaaatttatttaaaatttaacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccc 11005641  T
Q  162 tcacccctttttcacccacaaaccaccat 190  Q
    | |||||  ||||| ||||||| ||||||    
T  11005640 ttacccc-ctttcatccacaaatcaccat 11005613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 66 - 190
Target Start/End: Complemental strand, 36309087 - 36308964
Alignment:
Q  66 ttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctcac 165  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || ||||||||||||||| ||    
T  36309087 ttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaacccttac 36308988  T
Q  166 ccctttttcacccacaaaccaccat 190  Q
     || |||||| ||||||| ||||||    
T  36308987 tcc-ttttcatccacaaatcaccat 36308964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 62 - 190
Target Start/End: Original strand, 56162473 - 56162600
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || ||| ||||||||||    
T  56162473 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccc 56162572  T
Q  162 tcacccctttttcacccacaaaccaccat 190  Q
    | |||||  ||||| ||||||| ||||||    
T  56162573 ttacccc-ctttcatccacaaatcaccat 56162600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 64 - 162
Target Start/End: Complemental strand, 3875751 - 3875653
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 162  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||| |  | ||| || |||||||||||||||    
T  3875751 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatattttatgatcattctgaaccct 3875653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 64 - 162
Target Start/End: Original strand, 22169111 - 22169209
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 162  Q
    |||||||||| |||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| ||||||||  ||||| || |||||||||||||||    
T  22169111 agttacacccgaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 22169209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 24745076 - 24744951
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||| | ||||||| ||||||||  ||||| || |||||||||||||||     
T  24745076 agttacacccaaatttatttacaattttacaataataccaaaattgccctcttcatataaatttttaaaaatccatcttttataatcattctgaaccctt 24744977  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  24744976 acccc-ctttcatccacaaatcaccat 24744951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 189
Target Start/End: Complemental strand, 3874656 - 3874532
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||| |||||||||||||||||  ||| |||||| |||||||||||||||| |||||||||||||||| |  ||||| || |||||||||||||||     
T  3874656 agttacatccaaatttatttaaaattgtactataataccaaaattgtcctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccctt 3874557  T
Q  164 acccctttttcacccacaaaccacca 189  Q
    |||||  ||||| ||||||| |||||    
T  3874556 acccc-ctttcatccacaaatcacca 3874532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 3932075 - 3931949
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa--tcattctttcattatcattctgaaccc 161  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||||||||||  ||| ||||| || ||||||||||||||    
T  3932075 agttacaccaaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacctca-tcttttatgatcattctgaaccc 3931977  T
Q  162 tcacccctttttcacccacaaaccaccat 190  Q
    | ||||| |||| | ||||||| ||||||    
T  3931976 ttaccccctttt-atccacaaatcaccat 3931949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 33 - 171
Target Start/End: Complemental strand, 11382037 - 11381898
Alignment:
Q  33 gactcttt-ctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaa 131  Q
    |||||||| |||||||||| | ||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||  || |||  ||||||||||||    
T  11382037 gactctttgctagtctcaccctatataattctagttatatccaaatttatttaaaattttacaataatatcaaaattgctctgttcaagtaaatttctaa 11381938  T
Q  132 aaa-tcattctttcattatcattctgaaccctcaccccttt 171  Q
    ||| ||| ||||| || |||||||| ||  |||||||||||    
T  11381937 aaactca-tcttttatgatcattctaaattctcaccccttt 11381898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 64 - 159
Target Start/End: Complemental strand, 36225219 - 36225124
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaac 159  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| |||||| |  ||||| || ||||||||||||    
T  36225219 agttacatccaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaac 36225124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 26488351 - 26488456
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    |||||||||||||||||||||| |||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || ||||||||||||||    
T  26488351 ctagttacacccaaatttatttcaaat-ttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccc 26488449  T
Q  162 tcacccc 168  Q
    | |||||    
T  26488450 ttacccc 26488456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 39677791 - 39677666
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||  ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  39677791 agttacacctaaatttatttaaaattttacaataataccaaaattaccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 39677692  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  39677691 acccc-ctttcatccacaaatcaccat 39677666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 64 - 158
Target Start/End: Complemental strand, 7327782 - 7327688
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaa 158  Q
    ||||||| ||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||| ||| ||||| || |||||||||||    
T  7327782 agttacatccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaactca-tcttttatgatcattctgaa 7327688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 41 - 168
Target Start/End: Complemental strand, 43957968 - 43957841
Alignment:
Q  41 ctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattc 140  Q
    |||||| ||||||| | ||  |||||||| |||||||||||||||||| ||||||||||| |||||||| ||| ||| |||||| || |||||| |  ||    
T  43957968 ctagtcacactccaaaaaaaactagttacccccaaatttatttaaaattttacaataataccaaaattgcccttttcatgtaaaattttaaaaacccatc 43957869  T
Q  141 tttcattatcattctgaaccctcacccc 168  Q
    ||| || ||||||||||||||| |||||    
T  43957868 ttttatgatcattctgaacccttacccc 43957841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 42 - 168
Target Start/End: Original strand, 44878022 - 44878148
Alignment:
Q  42 tagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttcta-aaaatcattc 140  Q
    ||||||||| ||||| |||| ||||||||  |||||||||||||||  |||||||||||  ||||||||||||||| |||||||||||| ||| ||| ||    
T  44878022 tagtctcaccccatacaattttagttacattcaaatttatttaaaaatttacaataatactaaaattgtcctcttcatgtaaatttctagaaactca-tc 44878120  T
Q  141 tttcattatcattctgaaccctcacccc 168  Q
    ||| || ||| ||||||||| |||||||    
T  44878121 ttttatgatcgttctgaaccttcacccc 44878148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 134
Target Start/End: Complemental strand, 28573854 - 28573784
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa 134  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||| ||||||| ||||||||| ||||||    
T  28573854 agttacacccaaatttatttaaaattttacagtaatatcaaaattgccctcttcatgtaaatttttaaaaa 28573784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 162
Target Start/End: Complemental strand, 36432572 - 36432475
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 162  Q
    ||||||||| ||||||||||||||| |||||||||  ||||||||| ||||||| ||||||||| |||||| || ||||| || |||||||||||||||    
T  36432572 agttacacctaaatttatttaaaattttacaataacgtcaaaattgccctcttcatgtaaatttttaaaaacca-tcttttatgatcattctgaaccct 36432475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 167
Target Start/End: Complemental strand, 29933621 - 29933516
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||||| | ||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || || |||||||||||    
T  29933621 ctagttacatctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgattattctgaaccc 29933522  T
Q  162 tcaccc 167  Q
    | ||||    
T  29933521 ttaccc 29933516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 45 - 190
Target Start/End: Complemental strand, 7326544 - 7326399
Alignment:
Q  45 tctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa--tcattctt 142  Q
    |||||| |||||||||| |||||||||||||||||||||||||| ||| |||||||   |||||| ||||| | |||||| |||||||||   |||| ||    
T  7326544 tctcaccccatataattttagttacacccaaatttatttaaaattttagaataatactgaaattgccctctccatgtaaaattctaaaaaccccatt-tt 7326446  T
Q  143 tcattatcattctgaaccctcacccctttttcacccacaaaccaccat 190  Q
    |||| |||||| |||||| | |  ||| ||||||||||||||||||||    
T  7326445 tcatgatcattttgaaccttta-acctctttcacccacaaaccaccat 7326399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 7554526 - 7554422
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    |||||||||||||||||||| |||| ||||||||||| |||||||| | ||||| ||||||||| |||||| |  ||||| || |||||| ||||||||     
T  7554526 agttacacccaaatttatttcaaattttacaataataccaaaattgccatcttcatgtaaatttttaaaaacccatcttttatgatcattttgaaccctt 7554427  T
Q  164 acccc 168  Q
    |||||    
T  7554426 acccc 7554422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 29923605 - 29923728
Alignment:
Q  66 ttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctcac 165  Q
    ||||||| ||||||||||||||| |||||||||||  ||||||| ||||||| ||||||||| |||||| |  ||||| || |||||| |||||||| ||    
T  29923605 ttacacctaaatttatttaaaattttacaataatactaaaattgccctcttcatgtaaatttttaaaaacctatcttttatgatcattttgaacccttac 29923704  T
Q  166 ccctttttcacccacaaaccaccat 190  Q
    |||  ||||| ||||||| ||||||    
T  29923705 ccc-ctttcatccacaaatcaccat 29923728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 28867801 - 28867676
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 162  Q
    ||||||||  ||||||||||||||| ||||||||||| ||||||||  |||||| ||||||||| |||||| ||| ||||| || |||||||||||||||    
T  28867801 agttacacttaaatttatttaaaattttacaataataccaaaattgctctcttcatgtaaatttttaaaaactca-tcttttatgatcattctgaaccct 28867703  T
Q  163 cacccctttttcacccacaaaccaccat 190  Q
     |||||  ||||| ||||||| ||||||    
T  28867702 tacccc-ctttcatccacaaatcaccat 28867676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 162
Target Start/End: Complemental strand, 33961887 - 33961789
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 162  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||| | ||||| ||||||||| |||||| ||| |||||  | |||||||||||||||    
T  33961887 agttacacctaaatttatttaaaattttacaataatatcaaaattgccatcttcatgtaaatttttaaaaactca-tcttttctgatcattctgaaccct 33961789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 64 - 134
Target Start/End: Original strand, 20492505 - 20492575
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa 134  Q
    ||||||| | ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| ||||||    
T  20492505 agttacatcgaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaa 20492575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 66 - 168
Target Start/End: Original strand, 55541828 - 55541930
Alignment:
Q  66 ttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctcac 165  Q
    |||||| |||||||||||||||| ||||||||||| ||||||||  |||||| |||||| || |||||| |  ||||| || ||||||||||||||| ||    
T  55541828 ttacactcaaatttatttaaaattttacaataataccaaaattgctctcttcatgtaaaattttaaaaacccatcttttatgatcattctgaacccttac 55541927  T
Q  166 ccc 168  Q
    |||    
T  55541928 ccc 55541930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 64 - 171
Target Start/End: Complemental strand, 55282558 - 55282451
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||| | ||||||||||||||| ||||||||||| |||||||| ||||||| ||||| ||| |||||| |  | ||| || |||||||||||||||     
T  55282558 agttacatctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaattttttaaaaacccatattttatgatcattctgaaccctt 55282459  T
Q  164 accccttt 171  Q
    ||| ||||    
T  55282458 acctcttt 55282451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 74 - 159
Target Start/End: Complemental strand, 41764765 - 41764681
Alignment:
Q  74 aaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaac 159  Q
    ||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| ||||||    ||||| || ||||||||||||    
T  41764765 aaatttatttaaaattttacaataatatcaaaattgt-ctcttcatgtaaatttttaaaaacttatcttttatgatcattctgaac 41764681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 23115327 - 23115277
Alignment:
Q  38 tttctagtctcactccatataattctagttacacccaaatttatttaaaat 88  Q
    ||||||||||||  | |||||||||||||||||  ||||||||||||||||    
T  23115327 tttctagtctcatcctatataattctagttacattcaaatttatttaaaat 23115277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 7818532 - 7818464
Alignment:
Q  38 tttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaa 106  Q
    |||||| || ||| || |||| ||||||||||||||||||||| ||||||  ||| ||||||| |||||    
T  7818532 tttctattcgcaccccgtatatttctagttacacccaaatttacttaaaaatttataataataccaaaa 7818464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 2e-34; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 5458233 - 5458355
Alignment:
Q  36 tctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaat 135  Q
    |||| |||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||||||||||     
T  5458233 tcttgctagtctcatcccatataattctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaac 5458332  T
Q  136 cattctttcattatcattctgaa 158  Q
    |  ||||| || |||||||||||    
T  5458333 ccatcttttatgatcattctgaa 5458355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 64 - 162
Target Start/End: Complemental strand, 25487347 - 25487249
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 162  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||  ||||| || |||||||||||||||    
T  25487347 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttctaaaaatccatcttttatgatcattctgaaccct 25487249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 27719243 - 27719368
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| |||||||||||||||| |  ||||| || |||||||||||||||     
T  27719243 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccctt 27719342  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    | |||| ||||| ||||||| ||||||    
T  27719343 a-ccctctttcatccacaaatcaccat 27719368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 45084244 - 45084350
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| ||||||||  ||||| || ||||||||||||||    
T  45084244 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 45084343  T
Q  162 tcacccc 168  Q
    | |||||    
T  45084344 ttacccc 45084350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 20818956 - 20819060
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| |||||||||||||||| |  ||||| || |||||||||||||||     
T  20818956 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccctt 20819055  T
Q  164 acccc 168  Q
    |||||    
T  20819056 acccc 20819060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 62 - 190
Target Start/End: Complemental strand, 38098909 - 38098782
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||| |  ||||| || ||| ||||||||||    
T  38098909 ctagttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccc 38098810  T
Q  162 tcacccctttttcacccacaaaccaccat 190  Q
    | |||||  ||||| ||||||| ||||||    
T  38098809 ttacccc-ctttcatccacaaatcaccat 38098782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 35393644 - 35393519
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  35393644 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 35393545  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  35393544 acccc-ctttcatccacaaatcaccat 35393519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 34 - 171
Target Start/End: Complemental strand, 1105097 - 1104960
Alignment:
Q  34 actctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaa 133  Q
    |||||| ||||||||||  ||||||||||| |||||||| ||||||||||||||| ||||||||||| ||||||||   ||||| |||||||| ||||||    
T  1105097 actcttgctagtctcacctcatataattctggttacacctaaatttatttaaaattttacaataataccaaaattgctttcttcatgtaaattactaaaa 1104998  T
Q  134 atcattctttcattatcattctgaaccctcaccccttt 171  Q
    | |  ||||| || || ||||||||| |||||||||||    
T  1104997 acccatcttttatgataattctgaactctcaccccttt 1104960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 26416422 - 26416318
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||| ||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||| |  ||||| || || ||||||||||||     
T  26416422 agttacatccaaatttatttaaaattttacaataatatcaaaatggtcctcttcatgtaaatttctaaaaacccatcttttatgattattctgaaccctt 26416323  T
Q  164 acccc 168  Q
    |||||    
T  26416322 acccc 26416318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 64 - 162
Target Start/End: Original strand, 8352381 - 8352479
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 162  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||    
T  8352381 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 8352479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 30700139 - 30700014
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    |||||||| |||||||||||||||| |||||||||||||||||||| ||||||  ||||||||| |||||||   ||||| || |||||||||||||||     
T  30700139 agttacactcaaatttatttaaaattttacaataatatcaaaattgccctctttgtgtaaatttttaaaaattcatcttttatgatcattctgaaccctt 30700040  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  30700039 acccc-ctttcatccacaaatcaccat 30700014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 30655004 - 30655127
Alignment:
Q  66 ttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctcac 165  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  | ||| || ||||||||||||||| ||    
T  30655004 ttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacctattttttatgatcattctgaacccttac 30655103  T
Q  166 ccctttttcacccacaaaccaccat 190  Q
    |||  ||||| ||||||| ||||||    
T  30655104 ccc-ctttcatccacaaatcaccat 30655127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 64 - 162
Target Start/End: Original strand, 12986672 - 12986770
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 162  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| |||||| ||| ||||| || |||||||||||||||    
T  12986672 agttacacctaaatttatttaaaattttacaataatatcaaaattgccctcttcgtgtaaatttttaaaaactca-tcttttatgatcattctgaaccct 12986770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 13174207 - 13174346
Alignment:
Q  33 gactctttctagtctcactc-catataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaa 131  Q
    |||||||||||||||||| | ||||||||| ||||||||| |||||||| ||||||| ||||||||||| | |||||  |||||||  |||||||| |||    
T  13174207 gactctttctagtctcaccctcatataattttagttacactcaaatttacttaaaattttacaataataccgaaattagcctcttcaagtaaatttttaa 13174306  T
Q  132 aaatcattctttcattatcattctgaaccctcaccccttt 171  Q
    ||| | || |||||| |||||| |||||  ||||||||||    
T  13174307 aaacccttttttcatgatcattatgaacattcaccccttt 13174346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 483280 - 483155
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||| ||||||||||||||||| |||||||||||  ||||||||||||||| ||||||||| |||||| |  ||||| || |||||| ||||||||     
T  483280 agttacatccaaatttatttaaaattttacaataatactaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattttgaaccctt 483181  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  483180 acccc-ctttcatccacaaatcaccat 483155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 11020404 - 11020529
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    |||||||||| |||||||||||||| ||||||||||| |||||||| ||||||| | ||||||| |||||| |  ||||| || |||||||||||||||     
T  11020404 agttacacccgaatttatttaaaattttacaataataccaaaattgccctcttcatataaatttttaaaaacccatcttttatgatcattctgaaccctt 11020503  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  11020504 acccc-ctttcatccacaaatcaccat 11020529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 206
Target Start/End: Complemental strand, 24757890 - 24757750
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||| ||||||||||||||||| |||||||||||  ||||||||||||||| ||||||||| |||||| |  | ||| || |||||||||||| ||     
T  24757890 agttacatccaaatttatttaaaattttacaataatactaaaattgtcctcttcatgtaaatttttaaaaacccat-ttttatgatcattctgaactctt 24757792  T
Q  164 acccctttttcacccacaaaccaccatgaatatgcaatcaata 206  Q
    ||||| |||||| ||||||| ||||||  || |||||||||||    
T  24757791 acccc-ttttcatccacaaatcaccatagatgtgcaatcaata 24757750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 29997495 - 29997620
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| | ||||| ||||||||| |||||| |  ||||| || || ||||||||||||     
T  29997495 agttacacccaaatttatttaaaattttacaataataccaaaattgccttcttcatgtaaatttttaaaaacccatcttttatgattattctgaaccctt 29997594  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  29997595 acccc-ctttcatccacaaatcaccat 29997620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 36781653 - 36781757
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 162  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| ||| ||||| || |||||| ||||||||    
T  36781653 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaactca-tcttttatgatcattttgaaccct 36781751  T
Q  163 cacccc 168  Q
     |||||    
T  36781752 tacccc 36781757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 190
Target Start/End: Original strand, 18574772 - 18574920
Alignment:
Q  36 tctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaat 135  Q
    |||||||||||||||  |||||||||||||||||||| | ||||||||      ||||||||||| |||||||  ||||||| ||||||||| ||||||     
T  18574772 tctttctagtctcacagcatataattctagttacacctagatttattt------ttacaataataccaaaattaccctcttcatgtaaatttgtaaaaaa 18574865  T
Q  136 c-attctttcattatcattctgaaccctcacccctttttcacccacaaaccaccat 190  Q
    |  ||||| |||||||||| ||||||||||||||  ||||| ||||||| ||||||    
T  18574866 ctcttcttccattatcattttgaaccctcacccc-ctttcatccacaaatcaccat 18574920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 20187473 - 20187577
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||||| |  ||||| || |||||| ||||| ||     
T  20187473 agttacacctaaatttatttaaaattttacaataatatcaaaattgtcatcttcatgtaaatttttaaaaacccatcttttatgatcattatgaactctt 20187572  T
Q  164 acccc 168  Q
    |||||    
T  20187573 acccc 20187577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 20206542 - 20206646
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||||| |  ||||| || |||||| ||||| ||     
T  20206542 agttacacctaaatttatttaaaattttacaataatatcaaaattgtcatcttcatgtaaatttttaaaaacccatcttttatgatcattatgaactctt 20206641  T
Q  164 acccc 168  Q
    |||||    
T  20206642 acccc 20206646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 33411046 - 33411172
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaa-tttctaaaaatcattctttcattatcattctgaaccct 162  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| |||||| ||| |||||| |  ||||| || |||||| ||||||||    
T  33411046 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaattttttaaaaacccatcttttatgatcattttgaaccct 33411145  T
Q  163 cacccctttttcacccacaaaccaccat 190  Q
     | |||| ||||| ||||||| ||||||    
T  33411146 ta-ccctctttcatccacaaatcaccat 33411172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 64 - 162
Target Start/End: Original strand, 39780313 - 39780412
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 162  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||| ||||||| ||||||||| ||||||  |  ||||| || |||||||||||||||    
T  39780313 agttacacccaaatttatttaaaattttataataatatcaaaattgccctcttcatgtaaatttttaaaaaccccatcttttatgatcattctgaaccct 39780412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 134
Target Start/End: Original strand, 31097516 - 31097586
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa 134  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||| ||||| ||||||||| ||||||    
T  31097516 agttacacccaaatttatttaaaattttacaataataccaaaattgtcttcttcatgtaaatttttaaaaa 31097586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 32834592 - 32834688
Alignment:
Q  66 ttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 162  Q
    ||||||| ||||||||||||||| ||||||||||| |||||||||| ||||| ||||||||| ||||||||  | ||| || || ||||||||||||    
T  32834592 ttacacctaaatttatttaaaattttacaataataccaaaattgtcatcttcatgtaaatttttaaaaatccattttttatgattattctgaaccct 32834688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 90 - 248
Target Start/End: Original strand, 20524969 - 20525125
Alignment:
Q  90 ttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctcacccctttttcacccacaaaccacca 189  Q
    ||||||||||| | |||||||| ||||| ||||||||| | |||| | |||||||||||||| | |||||| | | ||| |||||||||| ||| || ||    
T  20524969 ttacaataataccgaaattgtcttcttcatgtaaattttttaaaa-ccttctttcattatcactttgaacctttatccc-ttttcacccaaaaatcatca 20525066  T
Q  190 tgaatatgcaatcaatacctacaaaaatcatcaattgaatcaacatctattccattgat 248  Q
    || || ||||||||||| |||| ||||  |   ||||||||||||||| || |||||||    
T  20525067 tggatgtgcaatcaatatctaccaaaactaaagattgaatcaacatctttttcattgat 20525125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 29226034 - 29225977
Alignment:
Q  54 atataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtc 111  Q
    |||||||||||||||||    |||||||||||||| ||||||||||||||||||||||    
T  29226034 atataattctagttacaatgcaatttatttaaaattttacaataatatcaaaattgtc 29225977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 108
Target Start/End: Original strand, 16584399 - 16584468
Alignment:
Q  38 tttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaatt 108  Q
    ||||||||| ||||| ||||| |||| |||||||||||||||| ||||||| ||| ||||||| |||||||    
T  16584399 tttctagtcacactctatata-ttctggttacacccaaatttacttaaaattttataataataccaaaatt 16584468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 62 - 190
Target Start/End: Complemental strand, 2380418 - 2380291
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||||||||||||| ||||||||| ||||||||| ||||| || ||||||||||||||    
T  2380418 ctagttacacccaaatttatttaaatttttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatcaatcttttatgatcattctgaaccc 2380319  T
Q  162 tcacccctttttcacccacaaaccaccat 190  Q
    | |||||  ||||| ||||||| ||||||    
T  2380318 ttacccc-ctttcatccacaaatcaccat 2380291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 64 - 206
Target Start/End: Complemental strand, 33965570 - 33965429
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  33965570 agttacacccaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct- 33965472  T
Q  164 acccctttttcacccacaaaccaccatgaatatgcaatcaata 206  Q
      |||| ||||| ||||||| |||||| ||| ||||| |||||    
T  33965471 tgccctctttcatccacaaatcaccataaatgtgcaaccaata 33965429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 26479977 - 26479852
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    |||||||||| |||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||| || ||||| || |||||||||||||||     
T  26479977 agttacaccccaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaaccaatcttttatgatcattctgaaccctt 26479878  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  26479877 acccc-ctttcatccacaaatcaccat 26479852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 62 - 190
Target Start/End: Complemental strand, 19390698 - 19390571
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || ||| ||||||||||    
T  19390698 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccc 19390599  T
Q  162 tcacccctttttcacccacaaaccaccat 190  Q
    | ||||| |||||| ||||||| ||||||    
T  19390598 ttacccc-ttttcatccacaaatcaccat 19390571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 167 - 303
Target Start/End: Original strand, 18375744 - 18375884
Alignment:
Q  167 cctttttcacccacaaaccaccatgaatatgcaatcaatacctacaaaaatcatcaattgaatcaacatctattccattgataagtactcgattcatac- 265  Q
    ||||||||||||||||||||||| | ||||| ||||||||||||| ||||||  ||||||||||||||||| ||| || |||  |||||| ||||||||     
T  18375744 cctttttcacccacaaaccaccaaggatatgtaatcaatacctactaaaatcgccaattgaatcaacatcttttctatcgatccgtactctattcataca 18375843  T
Q  266 ---gagtgaatttcgtaaatttcttcgagtttctatttatc 303  Q
        ||| |||||| ||||||||||||||||||||||||||    
T  18375844 agtaagtaaatttcataaatttcttcgagtttctatttatc 18375884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 12242742 - 12242848
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||| |  ||||| || ||||||||||||||    
T  12242742 ctagttacacctaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccc 12242841  T
Q  162 tcacccc 168  Q
    | |||||    
T  12242842 ttacccc 12242848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 21867108 - 21866983
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  21867108 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 21867009  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  21867008 acccc-ctttcatccacaaatcaccat 21866983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 25336526 - 25336651
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||| ||||||||  ||||| || || |||||||||| |     
T  25336526 agttacacccaaatttatttaaaattttacaataatatcaaaattgtccttttcatgtaaatttttaaaaatctatcttttatgattattctgaaccttt 25336625  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  25336626 acccc-ctttcatccacaaatcaccat 25336651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 66 - 190
Target Start/End: Complemental strand, 39430382 - 39430259
Alignment:
Q  66 ttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccctca 164  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||| |||||| |||||||||||||||| ||| | ||| || ||||||||||||||| |    
T  39430382 ttacacccaaatttatttaaaattttacaataataccaaaattgttctcttcatgtaaatttctaaaaactca-tattttatgatcattctgaaccctta 39430284  T
Q  165 cccctttttcacccacaaaccaccat 190  Q
    |||| |||||| ||||||| ||||||    
T  39430283 cccc-ttttcatccacaaatcaccat 39430259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 4049461 - 4049564
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||||| || ||||| || || ||||||||||||     
T  4049461 agttacacccaaatttatttaaaattttacaataatatcaaaattgtcttcttcatgtaaatttttaaaaacca-tcttttatgattattctgaaccctt 4049559  T
Q  164 acccc 168  Q
    |||||    
T  4049560 acccc 4049564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 41568831 - 41568706
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 162  Q
    ||||||||| ||||||||||||||| ||||||||||| ||||||| |||||||| |||||||||||||||| ||| ||||| || |||||| ||||||||    
T  41568831 agttacacctaaatttatttaaaattttacaataataccaaaattatcctcttcatgtaaatttctaaaaactca-tcttttatgatcattttgaaccct 41568733  T
Q  163 cacccctttttcacccacaaaccaccat 190  Q
     ||||| |||||| ||||||| ||||||    
T  41568732 tacccc-ttttcatccacaaatcaccat 41568706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 64 - 162
Target Start/End: Original strand, 8113689 - 8113787
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 162  Q
    ||||||||||||||||||||||||| |||| |||||| |||||||||||||||| ||||||||| |||||| |  ||||| || |||||||||||||||    
T  8113689 agttacacccaaatttatttaaaattttactataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 8113787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 11124458 - 11124333
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||| ||||||||     
T  11124458 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattttgaaccctt 11124359  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  11124358 acccc-ctttcatccacaaatcaccat 11124333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 14287576 - 14287451
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||| |  ||||| || ||||||||||||| |     
T  14287576 agttacacctaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccttt 14287477  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  14287476 acccc-ctttcatccacaaatcaccat 14287451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 30787268 - 30787143
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||| ||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  30787268 agttacacccaaatttatttaaaattttacaataataccaaaattgccctattcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 30787169  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  30787168 acccc-ctttcatccacaaatcaccat 30787143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 2357341 - 2357464
Alignment:
Q  66 ttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctcac 165  Q
    |||||| |||||||||||||||| |||||||||||  ||||||||||||||| ||||||||| |||||| |  ||||| || ||||||||||||||| ||    
T  2357341 ttacactcaaatttatttaaaattttacaataatactaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaacccttac 2357440  T
Q  166 ccctttttcacccacaaaccaccat 190  Q
    |||  ||||| ||||||| ||||||    
T  2357441 ccc-ctttcatccacaaatcaccat 2357464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 167 - 304
Target Start/End: Original strand, 18924990 - 18925130
Alignment:
Q  167 cctttttcacccacaaaccaccatgaatatgcaatcaatacctacaaaaatcatcaattgaatcaacatctattccattgataagtactcgattcatac- 265  Q
    ||||||||||||| ||||||| ||  |||||||||||||| |||| ||||||  ||||||||| ||||| | ||||||||||| |||||| ||||||||     
T  18924990 cctttttcacccagaaaccactatagatatgcaatcaatatctactaaaatcgccaattgaat-aacatattttccattgatatgtactctattcataca 18925088  T
Q  266 ---gagtgaatttcgtaaatttcttcgagtttctatttatcg 304  Q
        |||||||||| ||||||||||||||||| |||||||||    
T  18925089 aataagtgaatttcataaatttcttcgagtttttatttatcg 18925130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 206
Target Start/End: Complemental strand, 2372217 - 2372076
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||| | ||||||||||||| | |||||||||||  ||||||| ||||||| ||||||||| ||||||||  ||||| || |||||||||||||||     
T  2372217 agttacatctaaatttatttaaacttttacaataatactaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 2372118  T
Q  164 acccctttttcacccacaaaccaccatgaatatgcaatcaata 206  Q
    |||||  ||||| ||||||| ||||||  || |||||||||||    
T  2372117 acccc-ctttcatccacaaatcaccatagatgtgcaatcaata 2372076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 20115063 - 20115188
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||| |||||||| ||||||||| | |||| |  ||||| || ||||||||||||| |     
T  20115063 agttacacccaaatttatttaaaattttacaataataccaaaattttcctcttcatgtaaattttttaaaacccatcttttatgatcattctgaaccttt 20115162  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    | |||| ||||| ||||||| ||||||    
T  20115163 a-ccctctttcatccacaaatcaccat 20115188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 162
Target Start/End: Complemental strand, 31547399 - 31547301
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 162  Q
    ||||| ||||||||||||||||||| ||||||||||| |||||||||| ||||| ||||||||| |||||||   ||||| || |||||||||||||||    
T  31547399 agttagacccaaatttatttaaaattttacaataataccaaaattgtcatcttcatgtaaatttttaaaaattcatcttttatgatcattctgaaccct 31547301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 17977872 - 17977767
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 162  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| ||||||  |  ||||| || |||||||||||||||    
T  17977872 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaaccccatcttttatgatcattctgaaccct 17977773  T
Q  163 cacccc 168  Q
     |||||    
T  17977772 tacccc 17977767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 64 - 206
Target Start/End: Original strand, 11978764 - 11978905
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||||| ||||  ||||||||| |||||| |  | ||| || |||||||||||| ||     
T  11978764 agttacacctaaatttatttaaaattttacaataataccaaaattgtcatctttctgtaaatttttaaaaacccattttttatgatcattctgaactctt 11978863  T
Q  164 acccctttttcacccacaaaccaccatgaatatgcaatcaata 206  Q
    | |||  ||||| ||||||| ||||||  || |||||||||||    
T  11978864 atccc-ctttcatccacaaatcaccatagatgtgcaatcaata 11978905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 64 - 162
Target Start/End: Original strand, 6034413 - 6034512
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 162  Q
    ||||||||||||||||||||||||| ||| |||||||  ||||||| ||||||| ||||||||| ||||||  |  ||||| || |||||||||||||||    
T  6034413 agttacacccaaatttatttaaaattttataataatactaaaattgccctcttcatgtaaatttttaaaaaccccatcttttatgatcattctgaaccct 6034512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 1222746 - 1222650
Alignment:
Q  66 ttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 162  Q
    ||||||||||||||||||| ||| |||||||||||  |||||||  |||||| ||||||||| |||||| ||| ||||| || |||||||||||||||    
T  1222746 ttacacccaaatttatttagaattttacaataatactaaaattgctctcttcatgtaaatttttaaaaactca-tcttttatgatcattctgaaccct 1222650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 43652906 - 43652968
Alignment:
Q  38 tttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataata 100  Q
    ||||||||| ||| ||||||| |||| |||| ||||||||||||||||||| |||||||||||    
T  43652906 tttctagtcacaccccatatatttctggttatacccaaatttatttaaaattttacaataata 43652968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 17435356 - 17435400
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaatt 108  Q
    ||||||||  ||||||||||||||| |||||||||||||||||||    
T  17435356 agttacacttaaatttatttaaaattttacaataatatcaaaatt 17435400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 932072 - 932125
Alignment:
Q  60 ttctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcct 113  Q
    ||||||||||||||| ||||| || |||| ||| ||||||| ||||||||||||    
T  932072 ttctagttacacccatatttactttaaattttataataataccaaaattgtcct 932125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 263
Target Start/End: Complemental strand, 9729511 - 9729418
Alignment:
Q  170 ttttcacccacaaaccaccatgaatatgcaatcaatacctacaaaaatcatcaattgaatcaacatctattccattgataagtactcgattcat 263  Q
    |||| ||||||||||||||||| || ||||||||||| |||| ||||| |   |||||||  |||||| || |||||||  |||||| ||||||    
T  9729511 tttttacccacaaaccaccatggatgtgcaatcaataactaccaaaattaaagattgaattcacatctttttcattgatccgtactctattcat 9729418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 112
Target Start/End: Original strand, 9141715 - 9141767
Alignment:
Q  60 ttctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcc 112  Q
    ||||||||||||||||||| | ||||||| || || ||||| |||||||||||    
T  9141715 ttctagttacacccaaattaacttaaaattttgcattaataccaaaattgtcc 9141767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 35006508 - 35006464
Alignment:
Q  65 gttacacccaaatttatttaaaatcttacaataatatcaaaattg 109  Q
    |||||||| ||||||| ||||||  ||||||||||||||||||||    
T  35006508 gttacacctaaatttacttaaaagtttacaataatatcaaaattg 35006464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 33 - 164
Target Start/End: Original strand, 11081 - 11212
Alignment:
Q  33 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 132  Q
    ||||||| |||||||||| ||||||||||||||||||| | ||||||||||||||| ||||||||||| |||||||| ||||||| |||| ||| |||||    
T  11081 gactcttgctagtctcaccccatataattctagttacatctaaatttatttaaaattttacaataataacaaaattgccctcttcatgtatattactaaa 11180  T
Q  133 aatcattctttcattatcattctgaaccctca 164  Q
    || |  ||||| || |||||||||||||||||    
T  11181 aacccatcttttatgatcattctgaaccctca 11212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 6e-31; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 62 - 190
Target Start/End: Complemental strand, 40431407 - 40431280
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||||||||||||| ||||||||| ||||||||  ||||| || ||||||||||||||    
T  40431407 ctagttacacccaaatttatttaaatttttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 40431308  T
Q  162 tcacccctttttcacccacaaaccaccat 190  Q
    | |||||  ||||| ||||||| ||||||    
T  40431307 ttacccc-ctttcatccacaaatcaccat 40431280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 64 - 186
Target Start/End: Complemental strand, 47020599 - 47020478
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 162  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| ||| ||||| || |||||||||||||||    
T  47020599 agttacacccaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttttaaaaactca-tcttttatgatcattctgaaccct 47020501  T
Q  163 cacccctttttcacccacaaacca 186  Q
     |||||  ||||| ||||||||||    
T  47020500 tacccc-ctttcatccacaaacca 47020478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 62 - 190
Target Start/End: Original strand, 42076334 - 42076461
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||||||||||||| ||||||||| ||||||||  ||||| || |||||||||||||     
T  42076334 ctagttacacccaaatttatttaaatttttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccg 42076433  T
Q  162 tcacccctttttcacccacaaaccaccat 190  Q
    | |||||  ||||| ||||||| ||||||    
T  42076434 ttacccc-atttcatccacaaatcaccat 42076461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 33 - 168
Target Start/End: Complemental strand, 3112236 - 3112101
Alignment:
Q  33 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 132  Q
    |||||||  ||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||  | ||||| |||||||| |||||    
T  3112236 gactcttgttagtctcatcccatataattctagttacacccaaatttatttaaaattttacaataataccaaaattaccatcttcatgtaaattactaaa 3112137  T
Q  133 aatcattctttcattatcattctgaaccctcacccc 168  Q
    || |  ||||| || |||||| |||||| |||||||    
T  3112136 aacctatcttttatgatcattatgaaccttcacccc 3112101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 3887672 - 3887797
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    |||||||| |||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  3887672 agttacactcaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 3887771  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  3887772 acccc-ctttcatccacaaatcaccat 3887797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 5544434 - 5544309
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  5544434 agttacacccaaatttatttaaaattttacaataatattaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 5544335  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  5544334 acccc-ctttcatccacaaatcaccat 5544309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 9741356 - 9741231
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  9741356 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 9741257  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  9741256 acccc-ctttcatccacaaatcaccat 9741231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 18676886 - 18676761
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| | ||||| ||||||||| ||||||||  ||||| || |||||||||||||||     
T  18676886 agttacacccaaatttatttaaaattttacaataataccaaaattgccatcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 18676787  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  18676786 acccc-ctttcatccacaaatcaccat 18676761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 31588048 - 31587923
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  31588048 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 31587949  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  31587948 acccc-ctttcatccacaaatcaccat 31587923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 42697406 - 42697512
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||  ||||||||| |||||||   ||||| || ||||||||||||||    
T  42697406 ctagttacacccaaatttatttaaaattttacaataataccaaaattgtcctctttatgtaaatttttaaaaattcatcttttatgatcattctgaaccc 42697505  T
Q  162 tcacccc 168  Q
    | |||||    
T  42697506 ttacccc 42697512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 47455052 - 47455156
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  47455052 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 47455151  T
Q  164 acccc 168  Q
    |||||    
T  47455152 acccc 47455156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 30888522 - 30888418
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||| |||||||||||||||| |  | ||| || |||||||||||||||     
T  30888522 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacccatattttatgatcattctgaaccctt 30888423  T
Q  164 acccc 168  Q
    |||||    
T  30888422 acccc 30888418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 31621940 - 31622036
Alignment:
Q  66 ttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 162  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||||   ||||| || |||||||||||||||    
T  31621940 ttacatccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaattcatcttttatgatcattctgaaccct 31622036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 44508505 - 44508631
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaa-tttctaaaaatcattctttcattatcattctgaaccct 162  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| |||||| ||| |||||| |  ||||| || |||||||||||||||    
T  44508505 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaattttttaaaaacccatcttttatgatcattctgaaccct 44508604  T
Q  163 cacccctttttcacccacaaaccaccat 190  Q
     |||||  ||||| ||||||| ||||||    
T  44508605 tacccc-ctttcatccacaaatcaccat 44508631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 12726348 - 12726223
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    |||||||||| |||||||||||||| ||||||||||| |||||||  ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  12726348 agttacacccgaatttatttaaaattttacaataataccaaaattaccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 12726249  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  12726248 acccc-ctttcatccacaaatcaccat 12726223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 44291054 - 44291158
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||||| |  ||||| || |||||| ||||| ||     
T  44291054 agttacacctaaatttatttaaaattttacaataatatcaaaattgtcatcttcatgtaaatttttaaaaacccatcttttatgatcattatgaactctt 44291153  T
Q  164 acccc 168  Q
    |||||    
T  44291154 acccc 44291158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 64 - 159
Target Start/End: Complemental strand, 9870532 - 9870437
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaac 159  Q
    ||||||| ||||||| ||| ||||  ||||||||||| |||||||||||||||| |||||||||||||||| |  ||||| |||||||||||||||    
T  9870532 agttacatccaaattaattaaaaagtttacaataataacaaaattgtcctcttcatgtaaatttctaaaaacccatcttttattatcattctgaac 9870437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 72 - 190
Target Start/End: Original strand, 44061818 - 44061935
Alignment:
Q  72 ccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccctcacccctt 170  Q
    ||||||||||||||||| ||||||||||||||||||||  |||||| ||||||||| |||||| ||| ||||| || ||||||||||||||| |||||      
T  44061818 ccaaatttatttaaaattttacaataatatcaaaattgctctcttcatgtaaatttttaaaaactca-tcttttatgatcattctgaacccttacccc-c 44061915  T
Q  171 tttcacccacaaaccaccat 190  Q
    ||||| ||||||| ||||||    
T  44061916 tttcatccacaaatcaccat 44061935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 12848442 - 12848567
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||  ||||||| | ||||||| |||||| |  ||||| || |||||||||||||||     
T  12848442 agttacacctaaatttatttaaaattttacaataataccaaaattaccctcttcatataaatttttaaaaacccatcttttatgatcattctgaaccctt 12848541  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  12848542 acccc-ctttcatccacaaatcaccat 12848567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 41118907 - 41118782
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||| ||||||||||||||| | ||||||||| |||||||| | ||||| ||||||||| ||||||||  ||||| || || ||||||||||||     
T  41118907 agttacacctaaatttatttaaaatttaacaataataccaaaattgccttcttcatgtaaatttttaaaaatccatcttttatgataattctgaaccctt 41118808  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  41118807 acccc-ctttcatccacaaatcaccat 41118782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 38168207 - 38168128
Alignment:
Q  34 actctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcct 113  Q
    ||||||||||||||||| || |||||||||||||||| ||||| ||| ||||||| |||||| |||| ||||||||||||    
T  38168207 actctttctagtctcaccccgtataattctagttacatccaaaattacttaaaattttacaaaaataccaaaattgtcct 38168128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 40186836 - 40186711
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 162  Q
    ||||||| ||||||||||||||||| ||| ||||||| ||||| || ||||||| ||||||||| |||||| ||| ||||| || |||||||||||| ||    
T  40186836 agttacatccaaatttatttaaaattttataataataccaaaagtgccctcttcatgtaaatttttaaaaactca-tcttttatgatcattctgaactct 40186738  T
Q  163 cacccctttttcacccacaaaccaccat 190  Q
     |||||  ||||| ||||||| ||||||    
T  40186737 tacccc-ctttcatccacaaatcaccat 40186711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 40190188 - 40190129
Alignment:
Q  74 aaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa 134  Q
    ||||||||||||||| |||||||||||||||||||| ||||||| | ||||||||||||||    
T  40190188 aaatttatttaaaat-ttacaataatatcaaaattgccctcttcatataaatttctaaaaa 40190129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 115
Target Start/End: Complemental strand, 38743353 - 38743302
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctct 115  Q
    |||||||| |||||||||||||||| |||||||||||||||||||| |||||    
T  38743353 agttacactcaaatttatttaaaattttacaataatatcaaaattgccctct 38743302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 39494855 - 39494922
Alignment:
Q  33 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataata 100  Q
    |||||||| |||||||||   |||||||| |||||||||| ||||||||||||||| |||||||||||    
T  39494855 gactctttttagtctcaccttatataattttagttacacctaaatttatttaaaattttacaataata 39494922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 27419174 - 27419059
Alignment:
Q  53 catataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcat 152  Q
    ||||||| |||| ||||||| ||||||| ||||||| ||| ||||||| ||||||||  |||| |  ||| | ||||||||| |  | |||||| |||||    
T  27419174 catataactctaattacacctaaatttacttaaaattttataataataccaaaattgctctctccacgtagaattctaaaaacctctttttcataatcat 27419075  T
Q  153 tctgaaccctcacccc 168  Q
    |||||||| |||||||    
T  27419074 tctgaaccatcacccc 27419059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 37545041 - 37544993
Alignment:
Q  65 gttacacccaaatttatttaaaatcttacaataatatcaaaattgtcct 113  Q
    ||||||||||| |||| ||||||| | ||||||||||||||||||||||    
T  37545041 gttacacccaattttacttaaaatttaacaataatatcaaaattgtcct 37544993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0548 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0548
Description:

Target: scaffold0548; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 33 - 190
Target Start/End: Original strand, 5228 - 5383
Alignment:
Q  33 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 132  Q
    ||||||| || ||||||| |||||||||||||||||||| |||||||||||||||| ||||||| ||| |||||||| ||| ||| ||||||||||||||    
T  5228 gactcttgctggtctcac-ccatataattctagttacactcaaatttatttaaaattttacaattataccaaaattgccctgttcatgtaaatttctaaa 5326  T
Q  133 aatcattctttcattatcattctgaaccctcacccctttttcacccacaaaccaccat 190  Q
    || |  ||||| || |||||||||||  ||||||||  ||||| ||||||| ||||||    
T  5327 aacccatcttttatgatcattctgaattctcacccc-ctttcatccacaaatcaccat 5383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 62 - 168
Target Start/End: Complemental strand, 27939 - 27833
Alignment:
Q  62 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 161  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || ||||||||||||||    
T  27939 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccc 27840  T
Q  162 tcacccc 168  Q
    | |||||    
T  27839 ttacccc 27833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 64 - 162
Target Start/End: Complemental strand, 6570 - 6472
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 162  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||| |  | ||| || |||||||||||||||    
T  6570 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatattttatgatcattctgaaccct 6472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 189
Target Start/End: Complemental strand, 5475 - 5351
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||| |||||||||||||||||  ||| |||||| |||||||||||||||| |||||||||||||||| |  ||||| || |||||||||||||||     
T  5475 agttacatccaaatttatttaaaattgtactataataccaaaattgtcctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccctt 5376  T
Q  164 acccctttttcacccacaaaccacca 189  Q
    |||||  ||||| ||||||| |||||    
T  5375 acccc-ctttcatccacaaatcacca 5351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1360 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1360
Description:

Target: scaffold1360; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 1070 - 944
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa--tcattctttcattatcattctgaaccc 161  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||||||||||  ||| ||||| || ||||||||||||||    
T  1070 agttacaccaaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacctca-tcttttatgatcattctgaaccc 972  T
Q  162 tcacccctttttcacccacaaaccaccat 190  Q
    | ||||| |||| | ||||||| ||||||    
T  971 ttaccccctttt-atccacaaatcaccat 944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 20466 - 20394
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatc 136  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||  ||||||||| ||||||||    
T  20466 agttacacccaaatttatttaaaattttacaataatatcaaaattgccctcttaatgtaaatttttaaaaatc 20394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 105831 - 105706
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    ||||||||| ||||||||||||||| | ||||||||| |||||||| | ||||| ||||||||| ||||||||  ||||| || || ||||||||||||     
T  105831 agttacacctaaatttatttaaaatttaacaataataccaaaattgccttcttcatgtaaatttttaaaaatccatcttttatgataattctgaaccctt 105732  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  105731 acccc-ctttcatccacaaatcaccat 105706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 42804 - 42682
Alignment:
Q  64 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 163  Q
    |||||||| |||||||||||||||| ||||   |||| |||||||| ||||||| |||||||||  |||| ||  ||||| || |||||| ||||||||     
T  42804 agttacactcaaatttatttaaaattttac---aataccaaaattgccctcttcatgtaaattttaaaaactccatcttttatgatcattttgaaccctt 42708  T
Q  164 acccctttttcacccacaaaccaccat 190  Q
    |||||  ||||| ||||||| ||||||    
T  42707 acccc-atttcatccacaaatcaccat 42682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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