View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16561_high_92 (Length: 292)
Name: NF16561_high_92
Description: NF16561
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16561_high_92 |
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Alignment Details
Target: chr8 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 34489269 - 34489012
Alignment:
| Q |
16 |
aatataattacattcaattatactagtttctataattgttataggtgtttgtgtcatacatttgaattttggacaaatgttgtttcatgcaatttggtta |
115 |
Q |
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| T |
34489269 |
aatataattacattcaattatactagtttctataattgttataggtgtttgtgtcatacatttgaattttggacaaatgttgtttcatgcaatttggtga |
34489170 |
T |
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| Q |
116 |
ttttgtgttcagagatatattaatggggcttatgaaacgtttggtgaaaattcgttcctccaatctcaaagtgttgatcacatctgctacgcttgatggt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34489169 |
ttttgtgttcagagatatattaatggggcttatgaaacgtttggtgaaaattcgttcctccaatctcaaagtgttgatcacatctgctacgcttgatggt |
34489070 |
T |
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| Q |
216 |
gataaagtatcgaagttctttcgagattgccctgtattgaacatccctgggaagttgt |
273 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34489069 |
gataaagtatcgaagttctttcgagattgccctgtattgaacatccctgggaagttgt |
34489012 |
T |
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