View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16561_low_138 (Length: 247)
Name: NF16561_low_138
Description: NF16561
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16561_low_138 |
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Alignment Details
Target: chr7 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 39949210 - 39948971
Alignment:
| Q |
1 |
tgttcttttgtctttttatcaatccaattaccttgggtatgttgtgcagaagttctcaaacatgttccatctggtgatgtttgtgttggtagcagctgtg |
100 |
Q |
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| T |
39949210 |
tgttcttttgtctttttatcaatccaattaccttgggtatgttgtgcagaagttctcaaacatgttccatctggtgatgtttgtgttggtagcagctgtg |
39949111 |
T |
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| Q |
101 |
gttgtggagaatcattgtgtggcgagagcatatgatcttgttgtgcagaagatatattttgtgacattgtcatttggtgtatgttaacttgagttgacga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39949110 |
gttgtggagaatcattgtgtggcgagagcatatgatcttgttgtgcagaagatatattttgtgacattgtcatttggtgtatgttaacttgagttgacga |
39949011 |
T |
|
| Q |
201 |
ggaagctggtatttgttgtgacaatatttgtagccctttg |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
39949010 |
ggaagctggtatttgttgtgacaatatttgtagccctttg |
39948971 |
T |
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