View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16561_low_155 (Length: 227)
Name: NF16561_low_155
Description: NF16561
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16561_low_155 |
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Alignment Details
Target: chr6 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 15 - 210
Target Start/End: Complemental strand, 2386313 - 2386118
Alignment:
| Q |
15 |
cacagatgatacaagtagcaacaaaaaagcacttttctttcaatggtggtattttggtgtttgtgctggaagcctaatgggtgtaacagtcatgtcttac |
114 |
Q |
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| T |
2386313 |
cacagatgatacaagtagcaacaaaaaagcacttttctttcaatggtggtattttggtgtttgtgctggaagcctaatgggtgtaacagtcatgtcttac |
2386214 |
T |
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| Q |
115 |
atccaagatacatttggttgggtaatagggtttgctatacctgcgatttcgatgcttctttctatcttgattttctctagtggaagctctatatat |
210 |
Q |
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| T |
2386213 |
atccaagatacatttggttgggtaatagggtttgcgatacctgcgatttcgatgcttctttctatcttgattttctctagtggaagctctatatat |
2386118 |
T |
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