View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16561_low_44 (Length: 421)
Name: NF16561_low_44
Description: NF16561
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16561_low_44 |
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Alignment Details
Target: chr4 (Bit Score: 383; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 383; E-Value: 0
Query Start/End: Original strand, 8 - 406
Target Start/End: Original strand, 36439576 - 36439974
Alignment:
| Q |
8 |
tatcacccttggatctttcgcaccatactctataaaaacttcatctacgttgttaacaaaactaacattgaagataaaagtcggagtcatttcgggtact |
107 |
Q |
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| T |
36439576 |
tatcacccttggatctttcacaccatactctataaaaacttcatctacgttgttaacaaaactaacattgaagataaaagtcggagtcatttcgggtact |
36439675 |
T |
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| Q |
108 |
ccactccatctttgacccgtccacgacccggttctccatactggaactttattattgctgtatagaaacagctgtggaaacccagttgggtcgatccggt |
207 |
Q |
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| T |
36439676 |
ccgctccatctttgacccgtccacgacccggttctccatactggaactttattattgctgtatagaaacagctgtggaaacccggttgggtcgatccggt |
36439775 |
T |
|
| Q |
208 |
atgtcaaattcccggttcctggatcattgggagacttccaagatgttaggaaccggttcaaaccagttttccggtccaacccaagtttcatgaaaggaag |
307 |
Q |
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| T |
36439776 |
atgtcaaattcccggttcctggatcattgggagacttccaagatgttaggaacctgttcaaaccagttttccggtccaacccaagtttcatgaaaggaag |
36439875 |
T |
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| Q |
308 |
tagagtgttagttggataatcaaaactctgccatacaatgttttttccattgttatgagtcaaaacaaagtttccattgtctaaaagcttagctgaaac |
406 |
Q |
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| T |
36439876 |
tagagtgttagttggataatcaaaactctgccatacaatgttttttccattgttatgagtcaaaacaaagtttccattgtctaaaagcttagctgaaac |
36439974 |
T |
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