View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16561_low_60 (Length: 392)

Name: NF16561_low_60
Description: NF16561
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16561_low_60
NF16561_low_60
[»] chr6 (49 HSPs)
chr6 (171-374)||(27620130-27620333)
chr6 (171-374)||(27635740-27635943)
chr6 (180-374)||(4519269-4519463)
chr6 (180-374)||(4534456-4534650)
chr6 (180-374)||(29566874-29567071)
chr6 (180-374)||(29582281-29582478)
chr6 (12-95)||(8190217-8190300)
chr6 (12-95)||(27620409-27620492)
chr6 (12-95)||(27636019-27636102)
chr6 (12-95)||(33367096-33367179)
chr6 (12-95)||(33378379-33378462)
chr6 (12-95)||(4730499-4730582)
chr6 (187-260)||(27001657-27001730)
chr6 (187-260)||(27017163-27017236)
chr6 (197-374)||(26107255-26107430)
chr6 (197-374)||(26122487-26122662)
chr6 (204-374)||(31544619-31544794)
chr6 (267-374)||(29543485-29543593)
chr6 (267-374)||(29558895-29559003)
chr6 (268-374)||(4452822-4452929)
chr6 (268-374)||(28978256-28978363)
chr6 (286-374)||(29495378-29495466)
chr6 (286-374)||(29510716-29510804)
chr6 (180-374)||(34455174-34455373)
chr6 (180-374)||(34469462-34469661)
chr6 (236-374)||(27038397-27038537)
chr6 (236-374)||(27066736-27066876)
chr6 (236-374)||(27191694-27191830)
chr6 (236-374)||(27203547-27203683)
chr6 (236-374)||(27245548-27245684)
chr6 (236-374)||(27257411-27257547)
chr6 (204-374)||(2650988-2651158)
chr6 (204-256)||(7986566-7986618)
chr6 (204-256)||(30548916-30548968)
chr6 (204-256)||(30564180-30564232)
chr6 (332-374)||(16563661-16563703)
chr6 (236-373)||(16668133-16668274)
chr6 (240-295)||(5246005-5246060)
chr6 (240-295)||(16935081-16935136)
chr6 (240-295)||(16950190-16950245)
chr6 (236-373)||(16683415-16683556)
chr6 (313-374)||(4753528-4753589)
chr6 (313-374)||(4767048-4767109)
chr6 (313-374)||(4782203-4782264)
chr6 (313-374)||(4786054-4786115)
chr6 (313-374)||(26783153-26783214)
chr6 (313-374)||(26795125-26795186)
chr6 (313-374)||(27479140-27479201)
chr6 (313-374)||(27494394-27494455)
[»] chr4 (27 HSPs)
chr4 (172-374)||(20329282-20329490)
chr4 (172-374)||(20336311-20336519)
chr4 (197-374)||(19367194-19367373)
chr4 (12-95)||(4999857-4999940)
chr4 (12-95)||(5014936-5015019)
chr4 (200-330)||(762984-763116)
chr4 (204-374)||(43150426-43150601)
chr4 (236-374)||(18791446-18791587)
chr4 (236-374)||(18806074-18806215)
chr4 (204-374)||(30747724-30747903)
chr4 (204-374)||(30763029-30763208)
chr4 (268-374)||(14750330-14750437)
chr4 (268-374)||(14769433-14769540)
chr4 (208-261)||(4565499-4565552)
chr4 (204-256)||(21963697-21963749)
chr4 (204-256)||(21978947-21978999)
chr4 (204-374)||(33664623-33664801)
chr4 (204-374)||(33683435-33683613)
chr4 (236-295)||(5000075-5000134)
chr4 (236-295)||(5015154-5015213)
chr4 (332-374)||(5703885-5703927)
chr4 (286-374)||(36321150-36321236)
chr4 (286-374)||(36335359-36335445)
chr4 (286-374)||(36350449-36350535)
chr4 (313-374)||(33675760-33675821)
chr4 (204-247)||(54827434-54827477)
chr4 (204-247)||(54842661-54842704)
[»] chr5 (52 HSPs)
chr5 (171-374)||(28643058-28643264)
chr5 (171-374)||(28658463-28658669)
chr5 (180-374)||(13433376-13433574)
chr5 (180-374)||(13444270-13444468)
chr5 (187-374)||(32587058-32587246)
chr5 (187-374)||(32605487-32605675)
chr5 (204-374)||(42136840-42137011)
chr5 (180-374)||(24675297-24675493)
chr5 (180-374)||(24717824-24718020)
chr5 (180-374)||(24733284-24733480)
chr5 (180-374)||(6868354-6868547)
chr5 (180-374)||(6883478-6883671)
chr5 (268-371)||(29892828-29892930)
chr5 (187-374)||(30143699-30143891)
chr5 (187-374)||(30177749-30177941)
chr5 (12-95)||(37777400-37777483)
chr5 (12-95)||(37743318-37743401)
chr5 (197-295)||(13315582-13315683)
chr5 (197-295)||(13330909-13331010)
chr5 (180-374)||(24786248-24786447)
chr5 (180-289)||(28912272-28912382)
chr5 (180-289)||(28927540-28927650)
chr5 (180-374)||(15649528-15649719)
chr5 (180-374)||(15664904-15665095)
chr5 (197-374)||(31425393-31425571)
chr5 (197-374)||(31440731-31440909)
chr5 (276-374)||(28572560-28572657)
chr5 (197-373)||(37725988-37726171)
chr5 (180-260)||(5632016-5632095)
chr5 (180-260)||(5646890-5646969)
chr5 (236-374)||(43072248-43072389)
chr5 (236-374)||(43087535-43087676)
chr5 (208-261)||(3783527-3783580)
chr5 (208-261)||(3798882-3798935)
chr5 (204-256)||(33510362-33510414)
chr5 (204-256)||(33525625-33525677)
chr5 (197-256)||(29973211-29973270)
chr5 (197-256)||(30023373-30023432)
chr5 (197-256)||(30038637-30038696)
chr5 (309-374)||(5632152-5632215)
chr5 (313-374)||(15749715-15749776)
chr5 (313-374)||(15764943-15765004)
chr5 (309-374)||(5647026-5647089)
chr5 (286-374)||(12056628-12056714)
chr5 (236-373)||(18491440-18491582)
chr5 (236-373)||(18506755-18506897)
chr5 (240-295)||(27288076-27288131)
chr5 (240-295)||(37749059-37749114)
chr5 (240-295)||(37764305-37764360)
chr5 (313-374)||(2505059-2505120)
chr5 (313-374)||(2520379-2520440)
chr5 (313-374)||(37677492-37677553)
[»] chr3 (48 HSPs)
chr3 (171-374)||(10387890-10388096)
chr3 (171-374)||(10405264-10405469)
chr3 (172-374)||(26427063-26427269)
chr3 (12-95)||(28014996-28015079)
chr3 (12-95)||(28030314-28030397)
chr3 (187-374)||(28106872-28107061)
chr3 (187-374)||(28122108-28122297)
chr3 (187-374)||(5007606-5007798)
chr3 (187-374)||(5022865-5023057)
chr3 (180-374)||(5709341-5709541)
chr3 (180-374)||(5720251-5720451)
chr3 (180-374)||(5731154-5731354)
chr3 (180-374)||(5761014-5761214)
chr3 (187-374)||(50140199-50140393)
chr3 (187-263)||(5600354-5600430)
chr3 (187-263)||(5615595-5615671)
chr3 (236-374)||(48459883-48460025)
chr3 (236-374)||(48475642-48475784)
chr3 (187-260)||(28348309-28348382)
chr3 (187-374)||(22491163-22491351)
chr3 (187-260)||(28333207-28333280)
chr3 (208-374)||(51776122-51776287)
chr3 (208-374)||(51791208-51791373)
chr3 (221-373)||(22119705-22119859)
chr3 (204-374)||(6226341-6226512)
chr3 (204-374)||(18251930-18252109)
chr3 (268-374)||(18283216-18283323)
chr3 (268-374)||(18298517-18298624)
chr3 (268-374)||(18313818-18313925)
chr3 (204-374)||(26680682-26680857)
chr3 (204-374)||(24322075-24322253)
chr3 (204-374)||(24337427-24337605)
chr3 (197-289)||(8205720-8205814)
chr3 (197-289)||(8220889-8220983)
chr3 (276-374)||(43716695-43716790)
chr3 (204-256)||(17975657-17975709)
chr3 (204-256)||(17991205-17991257)
chr3 (204-256)||(18219137-18219189)
chr3 (204-256)||(18234445-18234497)
chr3 (236-374)||(47197298-47197439)
chr3 (236-323)||(22769008-22769097)
chr3 (204-374)||(16401289-16401467)
chr3 (204-330)||(18217727-18217862)
chr3 (236-311)||(7067358-7067436)
chr3 (236-311)||(7082310-7082388)
chr3 (240-295)||(37003381-37003436)
chr3 (313-374)||(6533603-6533664)
chr3 (313-374)||(6547434-6547495)
[»] chr2 (37 HSPs)
chr2 (180-374)||(16963031-16963225)
chr2 (180-374)||(12707400-12707597)
chr2 (180-374)||(12722800-12722997)
chr2 (12-95)||(16861172-16861255)
chr2 (180-374)||(27797761-27797960)
chr2 (180-374)||(27812850-27813049)
chr2 (187-374)||(22919016-22919210)
chr2 (187-374)||(22932126-22932320)
chr2 (187-374)||(19407354-19407545)
chr2 (187-374)||(19422354-19422545)
chr2 (180-374)||(37942700-37942899)
chr2 (12-95)||(2730165-2730248)
chr2 (180-374)||(16159755-16159955)
chr2 (180-374)||(16170656-16170856)
chr2 (180-374)||(34273301-34273492)
chr2 (180-373)||(39042698-39042894)
chr2 (180-373)||(39058032-39058228)
chr2 (180-374)||(34801855-34802054)
chr2 (236-374)||(31473205-31473346)
chr2 (220-374)||(34300347-34300499)
chr2 (200-373)||(5799664-5799843)
chr2 (236-374)||(34183974-34184115)
chr2 (208-261)||(13927574-13927627)
chr2 (208-261)||(13942770-13942823)
chr2 (204-256)||(16820297-16820349)
chr2 (204-256)||(16875519-16875571)
chr2 (204-256)||(32043790-32043842)
chr2 (204-256)||(32058986-32059038)
chr2 (197-373)||(15707210-15707384)
chr2 (313-374)||(10985457-10985518)
chr2 (187-330)||(37369087-37369232)
chr2 (187-330)||(37386921-37387066)
chr2 (268-347)||(27114830-27114907)
chr2 (268-347)||(27125795-27125872)
chr2 (204-247)||(251486-251529)
chr2 (204-247)||(267016-267059)
chr2 (286-374)||(34281044-34281130)
[»] chr8 (22 HSPs)
chr8 (180-374)||(19510091-19510289)
chr8 (12-95)||(15904132-15904215)
chr8 (180-374)||(28352920-28353115)
chr8 (180-374)||(28368105-28368300)
chr8 (12-95)||(19668187-19668270)
chr8 (12-95)||(19683549-19683632)
chr8 (180-374)||(19199277-19199470)
chr8 (180-374)||(19214332-19214525)
chr8 (204-374)||(31349901-31350078)
chr8 (204-374)||(31363701-31363878)
chr8 (266-374)||(3338431-3338541)
chr8 (236-374)||(4487134-4487272)
chr8 (276-374)||(40008553-40008648)
chr8 (197-256)||(31480770-31480829)
chr8 (197-256)||(31495916-31495975)
chr8 (301-374)||(44570303-44570375)
chr8 (220-294)||(3987863-3987938)
chr8 (240-295)||(33252701-33252756)
chr8 (240-295)||(33267904-33267959)
chr8 (221-373)||(4818673-4818823)
chr8 (313-374)||(6053923-6053984)
chr8 (180-247)||(3338574-3338641)
[»] chr7 (23 HSPs)
chr7 (180-374)||(26522010-26522207)
chr7 (12-95)||(26429027-26429110)
chr7 (12-95)||(26444465-26444548)
chr7 (187-374)||(31118973-31119165)
chr7 (187-374)||(31133148-31133340)
chr7 (187-374)||(32999266-32999454)
chr7 (197-374)||(26696037-26696216)
chr7 (204-374)||(5138036-5138212)
chr7 (204-374)||(5151309-5151485)
chr7 (276-371)||(16161161-16161256)
chr7 (197-374)||(4273534-4273716)
chr7 (187-374)||(26686043-26686235)
chr7 (187-374)||(26689584-26689776)
chr7 (187-374)||(26265652-26265844)
chr7 (187-374)||(26325684-26325876)
chr7 (187-374)||(26675906-26676098)
chr7 (180-374)||(4136126-4136319)
chr7 (180-374)||(4151052-4151245)
chr7 (187-374)||(26660713-26660905)
chr7 (197-373)||(11027834-11028017)
chr7 (240-295)||(3439483-3439538)
chr7 (240-295)||(21475472-21475527)
chr7 (240-295)||(24583482-24583537)
[»] chr1 (20 HSPs)
chr1 (12-95)||(10934946-10935029)
chr1 (12-95)||(10954137-10954220)
chr1 (187-374)||(14893641-14893833)
chr1 (180-374)||(30728169-30728365)
chr1 (12-95)||(9078470-9078553)
chr1 (187-374)||(41784197-41784388)
chr1 (187-374)||(41799465-41799656)
chr1 (197-374)||(36507078-36507259)
chr1 (180-289)||(16671282-16671392)
chr1 (286-374)||(47200998-47201086)
chr1 (180-374)||(47766505-47766695)
chr1 (208-261)||(13768110-13768163)
chr1 (313-374)||(28579044-28579105)
chr1 (313-374)||(28594470-28594531)
chr1 (313-374)||(47353878-47353939)
chr1 (204-247)||(10937467-10937510)
chr1 (204-247)||(10956658-10956701)
chr1 (204-247)||(10971884-10971927)
chr1 (240-295)||(16186921-16186976)
chr1 (204-247)||(47200907-47200950)
[»] scaffold1629 (1 HSPs)
scaffold1629 (180-373)||(957-1150)
[»] scaffold0336 (1 HSPs)
scaffold0336 (180-374)||(2262-2457)
[»] scaffold0159 (1 HSPs)
scaffold0159 (187-374)||(16743-16937)
[»] scaffold1179 (1 HSPs)
scaffold1179 (197-373)||(1480-1661)
[»] scaffold0477 (1 HSPs)
scaffold0477 (12-95)||(11107-11190)
[»] scaffold0350 (1 HSPs)
scaffold0350 (187-374)||(13331-13522)
[»] scaffold0166 (1 HSPs)
scaffold0166 (180-374)||(28631-28830)
[»] scaffold0182 (1 HSPs)
scaffold0182 (258-374)||(3146-3265)
[»] scaffold0418 (1 HSPs)
scaffold0418 (180-374)||(15291-15490)
[»] scaffold0252 (1 HSPs)
scaffold0252 (187-373)||(1634-1818)
[»] scaffold0289 (1 HSPs)
scaffold0289 (268-374)||(16567-16674)
[»] scaffold0279 (1 HSPs)
scaffold0279 (236-347)||(9274-9385)
[»] scaffold1760 (1 HSPs)
scaffold1760 (204-374)||(869-1047)
[»] scaffold0250 (1 HSPs)
scaffold0250 (286-374)||(329-416)
[»] scaffold0027 (1 HSPs)
scaffold0027 (204-256)||(130571-130623)
[»] scaffold0062 (1 HSPs)
scaffold0062 (197-373)||(56122-56296)
[»] scaffold0045 (1 HSPs)
scaffold0045 (236-295)||(91841-91900)
[»] scaffold1816 (1 HSPs)
scaffold1816 (310-374)||(994-1056)
[»] scaffold1536 (1 HSPs)
scaffold1536 (236-374)||(520-657)
[»] scaffold0603 (1 HSPs)
scaffold0603 (313-374)||(368-429)
[»] scaffold1803 (2 HSPs)
scaffold1803 (204-247)||(781-824)
scaffold1803 (286-373)||(876-962)


Alignment Details
Target: chr6 (Bit Score: 192; Significance: 1e-104; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 171 - 374
Target Start/End: Complemental strand, 27620333 - 27620130
Alignment:
Q  171 tcagaaaacaacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaataatc 270  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27620333 tcagaaaacaacagattcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcagaaaataatc 27620234  T
Q  271 atagtttaaacctgcaaaatcacgcgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataagg 370  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27620233 ataatttaaacctgcaaaatcacgcgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataagg 27620134  T
Q  371 atct 374  Q
    ||||    
T  27620133 atct 27620130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 171 - 374
Target Start/End: Complemental strand, 27635943 - 27635740
Alignment:
Q  171 tcagaaaacaacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaataatc 270  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27635943 tcagaaaacaacagattcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcagaaaataatc 27635844  T
Q  271 atagtttaaacctgcaaaatcacgcgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataagg 370  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27635843 ataatttaaacctgcaaaatcacgcgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataagg 27635744  T
Q  371 atct 374  Q
    ||||    
T  27635743 atct 27635740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 180 - 374
Target Start/End: Original strand, 4519269 - 4519463
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaataatcatagt-tta 278  Q
    |||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||   | | |||    
T  4519269 aacagaatcaagatttcc-aaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataatcttttctcagaaaataatatcactgtta 4519367  T
Q  279 aacctgcaaaatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||  |||||||||| ||  |||||||||  ||||||||||||||||||||  |||||||||||||| | ||| ||| ||||||||||||||||||    
T  4519368 aacct-aaaaatcacgcaagcaaaacagatc-caaaatttccagaattcaaagccaaaaccgtaaccgtgaacacaaaacctagatccataaggatct 4519463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 180 - 374
Target Start/End: Original strand, 4534456 - 4534650
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaataatcatagt-tta 278  Q
    |||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||   | | |||    
T  4534456 aacagaatcaagatttcc-aaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataatcttttctcagaaaataatatcactgtta 4534554  T
Q  279 aacctgcaaaatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||  |||||||||| ||  |||||||||  ||||||||||||||||||||  |||||||||||||| | ||| ||| ||||||||||||||||||    
T  4534555 aacct-aaaaatcacgcaagcaaaacagatc-caaaatttccagaattcaaagccaaaaccgtaaccgtgaacacaaaacctagatccataaggatct 4534650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 180 - 374
Target Start/End: Original strand, 29566874 - 29567071
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaa---ataatcatagtt 276  Q
    |||||||||||  | | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||    |||||||||||    
T  29566874 aacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataatctcttttcaaaaagtgttaatcatagtt 29566973  T
Q  277 taaacctgcaa--aatcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatc 373  Q
    ||| |||| ||  |||||||  || || || ||| |||||||||||||||||||  |||||||||||||||||| ||||||| |||||||||||||||||    
T  29566974 taagcctgtaaacaatcacgtaagcaagcatatc-aaaaatttccagaattcaa--agaaaaccgtaaccgtaaacacgaaacctagatccataaggatc 29567070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 180 - 374
Target Start/End: Original strand, 29582281 - 29582478
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaa---ataatcatagtt 276  Q
    |||||||||||  | | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||    |||||||||||    
T  29582281 aacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataatctcttttcaaaaagtgttaatcatagtt 29582380  T
Q  277 taaacctgcaa--aatcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatc 373  Q
    ||| |||| ||  |||||||  || || || ||| |||||||||||||||||||  |||||||||||||||||| ||||||| |||||||||||||||||    
T  29582381 taagcctgtaaacaatcacgtaagcaagcatatc-aaaaatttccagaattcaa--agaaaaccgtaaccgtaaacacgaaacctagatccataaggatc 29582477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 8190300 - 8190217
Alignment:
Q  12 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 95  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8190300 cacagaaccaatttcctcgcaattcaaagtacgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 8190217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 27620492 - 27620409
Alignment:
Q  12 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27620492 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgagctcaagcactgatcacgaggaagcagt 27620409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 27636102 - 27636019
Alignment:
Q  12 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27636102 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgagctcaagcactgatcacgaggaagcagt 27636019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 33367179 - 33367096
Alignment:
Q  12 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33367179 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaaacagt 33367096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 33378462 - 33378379
Alignment:
Q  12 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33378462 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaaacagt 33378379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 4730582 - 4730499
Alignment:
Q  12 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 95  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  4730582 cacagaatcaatttcctcgcaattcaaagtgcgagttcatcactgcaacgcgacgaactcaagcactgatcacgaggaaacagt 4730499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 187 - 260
Target Start/End: Original strand, 27001657 - 27001730
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctca 260  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27001657 tcaagttttcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctca 27001730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 187 - 260
Target Start/End: Original strand, 27017163 - 27017236
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctca 260  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27017163 tcaagttttcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctca 27017236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 197 - 374
Target Start/End: Complemental strand, 26107430 - 26107255
Alignment:
Q  197 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa--aataatcatagtttaaacctgcaaaatcacg 294  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||  ||| ||||  | ||||||||  |||||||||    
T  26107430 ccaaagaatttctccattaaaggtttcaaccaaaaccttaggtaaaactcataatctttt-tcaaaagcaat-atcactg-ttaaacct-aaaaatcacg 26107335  T
Q  295 cgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    | ||  |||||||||   |||||||||||||||||||  |||||||||||||||| ||| ||| ||||||||||||||||||    
T  26107334 caagcaaaacagatc--caaatttccagaattcaaagccaaaaccgtaaccgtaaacacaaaacctagatccataaggatct 26107255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 197 - 374
Target Start/End: Complemental strand, 26122662 - 26122487
Alignment:
Q  197 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa--aataatcatagtttaaacctgcaaaatcacg 294  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||  ||| ||||  | ||||||||  |||||||||    
T  26122662 ccaaagaatttctccattaaaggtttcaaccaaaaccttaggtaaaactcataatctttt-tcaaaagcaat-atcactg-ttaaacct-aaaaatcacg 26122567  T
Q  295 cgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    | ||  |||||||||   |||||||||||||||||||  |||||||||||||||| ||| ||| ||||||||||||||||||    
T  26122566 caagcaaaacagatc--caaatttccagaattcaaagccaaaaccgtaaccgtaaacacaaaacctagatccataaggatct 26122487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 204 - 374
Target Start/End: Original strand, 31544619 - 31544794
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaat----aatcatagtttaaacctgcaaaatcacgcgag- 298  Q
    |||||||||| ||| |||||||||||||| | ||||||||||||   || | | | ||||| |    ||||| |||||||||| | |||||||||| ||     
T  31544619 tttcctccatcaaaagtttcaaccaaaacttcaggtaaaactcatcttcctcttttaaaaagtttaaaatcacagtttaaacccgtaaaatcacgcaagc 31544718  T
Q  299 aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||||||||||||||||||||||||||  ||| |||||||||||| ||| ||| ||||||||||||||||||    
T  31544719 aaacagatctaaaaatttccagaattcaaaggtaaagccgtaaccgtaaacacaaaacctagatccataaggatct 31544794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 267 - 374
Target Start/End: Original strand, 29543485 - 29543593
Alignment:
Q  267 aatcatagtttaaacctgcaaaatcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatcca 365  Q
    ||||| |||||||||| | |||||||||| || |||||||||||||||||||||||||||||||  ||| |||||||||||| ||| ||| |||||||||    
T  29543485 aatcacagtttaaacccgtaaaatcacgcaagcaaacagatctaaaaatttccagaattcaaaggtaaagccgtaaccgtaaacacaaaacctagatcca 29543584  T
Q  366 taaggatct 374  Q
    |||||||||    
T  29543585 taaggatct 29543593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 267 - 374
Target Start/End: Original strand, 29558895 - 29559003
Alignment:
Q  267 aatcatagtttaaacctgcaaaatcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatcca 365  Q
    ||||| |||||||||| | |||||||||| || |||||||||||||||||||||||||||||||  ||| |||||||||||| ||| ||| |||||||||    
T  29558895 aatcacagtttaaacccgtaaaatcacgcaagcaaacagatctaaaaatttccagaattcaaaggtaaagccgtaaccgtaaacacaaaacctagatcca 29558994  T
Q  366 taaggatct 374  Q
    |||||||||    
T  29558995 taaggatct 29559003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 268 - 374
Target Start/End: Original strand, 4452822 - 4452929
Alignment:
Q  268 atcatagtttaaacctgcaaaa-tcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatcca 365  Q
    ||||||||||||||||| |||| |||||| || |||||||||||||| ||||||||||||||||| ||| |||||||||||| ||| ||| |||||||||    
T  4452822 atcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacacaaaacctagatcca 4452920  T
Q  366 taaggatct 374  Q
    |||||||||    
T  4452921 taaggatct 4452929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 268 - 374
Target Start/End: Complemental strand, 28978363 - 28978256
Alignment:
Q  268 atcatagtttaaacctgcaaaa-tcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatcca 365  Q
    ||||||||||||||||| |||| |||||| || |||||||||||||| ||||||||||||||||| ||| |||||||||||| ||| ||| |||||||||    
T  28978363 atcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacacaaaacctagatcca 28978265  T
Q  366 taaggatct 374  Q
    |||||||||    
T  28978264 taaggatct 28978256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 286 - 374
Target Start/End: Original strand, 29495378 - 29495466
Alignment:
Q  286 aaaatcacgcgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||||| || ||||||||||||||||||||||||||||||| || || |||||||||| ||| ||| ||||||||||||||||||    
T  29495378 aaaatcacgcaagcaacagatctaaaaatttccagaattcaaagataagactgtaaccgtaaacacaaaacctagatccataaggatct 29495466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 286 - 374
Target Start/End: Original strand, 29510716 - 29510804
Alignment:
Q  286 aaaatcacgcgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||||| || ||||||||||||||||||||||||||||||| || || |||||||||| ||| ||| ||||||||||||||||||    
T  29510716 aaaatcacgcaagcaacagatctaaaaatttccagaattcaaagataagactgtaaccgtaaacacaaaacctagatccataaggatct 29510804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 180 - 374
Target Start/End: Complemental strand, 34455373 - 34455174
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatct-tttctcaaa--aaataatcatagtt 276  Q
    |||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||     |||||||||||    
T  34455373 aacagaatcaagatttcc-aaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataatctctttttcaaaggtgttaatcatagtt 34455275  T
Q  277 taaacctgcaa--aatcacgcgag---aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataagga 371  Q
    | |||| | ||  |||||||| ||   || || ||| | |||||||||||||||||  |||||  | ||||||||| ||| ||| |||||||||||||||    
T  34455274 tgaaccggtaaacaatcacgcaagcaaaagcatatcaagaaatttccagaattcaa--agaaagtcataaccgtaaacacaaaacctagatccataagga 34455177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 180 - 374
Target Start/End: Complemental strand, 34469661 - 34469462
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatct-tttctcaaa--aaataatcatagtt 276  Q
    |||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||     |||||||||||    
T  34469661 aacagaatcaagatttcc-aaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataatctctttttcaaaggtgttaatcatagtt 34469563  T
Q  277 taaacctgcaa--aatcacgcgag---aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataagga 371  Q
    | |||| | ||  |||||||| ||   || || ||| | |||||||||||||||||  |||||  | ||||||||| ||| ||| |||||||||||||||    
T  34469562 tgaaccggtaaacaatcacgcaagcaaaagcatatcaagaaatttccagaattcaa--agaaagtcataaccgtaaacacaaaacctagatccataagga 34469465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 236 - 374
Target Start/End: Original strand, 27038397 - 27038537
Alignment:
Q  236 aggtaaaactcagaatcttttctcaaaaaat--aatcatagtttaaacctgcaaaa-tcacgcgagaaacagatctaaaaatttccagaattcaaagaga 332  Q
    ||||||||||||||| || || |||| ||||  |||||||||||||||||| |||| | |||| || |||||||| |||| ||||||||| ||||||| |    
T  27038397 aggtaaaactcagaacctcttttcaacaaatgaaatcatagtttaaacctgtaaaaattacgcaagcaacagatccaaaa-tttccagaactcaaagaca 27038495  T
Q  333 aaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||||||||||  || ||| ||||||||||||||||||    
T  27038496 aaaccgtaaccgtaaatacaaaacctagatccataaggatct 27038537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 236 - 374
Target Start/End: Original strand, 27066736 - 27066876
Alignment:
Q  236 aggtaaaactcagaatcttttctcaaaaaat--aatcatagtttaaacctgcaaaa-tcacgcgagaaacagatctaaaaatttccagaattcaaagaga 332  Q
    ||||||||||||||| || || |||| ||||  |||||||||||||||||| |||| | |||| || |||||||| |||| |||| |||| ||||||| |    
T  27066736 aggtaaaactcagaacctcttttcaacaaatgaaatcatagtttaaacctgtaaaaattacgcaagcaacagatccaaaattttc-agaactcaaagaca 27066834  T
Q  333 aaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||||||||||||||| ||| ||| ||||||||||||||||||    
T  27066835 aaaccgtaaccgtaaacacaaaacctagatccataaggatct 27066876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 236 - 374
Target Start/End: Original strand, 27191694 - 27191830
Alignment:
Q  236 aggtaaaactcagaatcttttctcaaaaaata-atcatagtttaaacctgcaaaatcacgcgag-aaacagatctaaaaatttccagaattcaaagagaa 333  Q
    |||||||||||||||||| |  |||||||  | ||||||||||||||||||||||||||| ||  |||||||   ||||||||||||||| || | ||||    
T  27191694 aggtaaaactcagaatctctcttcaaaaataatatcatagtttaaacctgcaaaatcacgtgaataaacaga---aaaaatttccagaat-cacaaagaa 27191789  T
Q  334 aaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||| ||||||||| ||| ||| ||||||||||||||||||    
T  27191790 aaccataaccgtaaacacaaaacctagatccataaggatct 27191830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 236 - 374
Target Start/End: Original strand, 27203547 - 27203683
Alignment:
Q  236 aggtaaaactcagaatcttttctcaaaaaata-atcatagtttaaacctgcaaaatcacgcgag-aaacagatctaaaaatttccagaattcaaagagaa 333  Q
    |||||||||||||||||| |  |||||||  | ||||||||||||||||||||||||||| ||  |||||||   ||||||||||||||| || | ||||    
T  27203547 aggtaaaactcagaatctctcttcaaaaataatatcatagtttaaacctgcaaaatcacgtgaataaacaga---aaaaatttccagaat-cacaaagaa 27203642  T
Q  334 aaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||| ||||||||| ||| ||| ||||||||||||||||||    
T  27203643 aaccataaccgtaaacacaaaacctagatccataaggatct 27203683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 236 - 374
Target Start/End: Complemental strand, 27245684 - 27245548
Alignment:
Q  236 aggtaaaactcagaatcttttctcaaaaaata-atcatagtttaaacctgcaaaatcacgcgag-aaacagatctaaaaatttccagaattcaaagagaa 333  Q
    |||||||||||||||||| |  |||||||  | ||||||||||||||||||||||||||| ||  |||||||   ||||||||||||||| || | ||||    
T  27245684 aggtaaaactcagaatctctcttcaaaaataatatcatagtttaaacctgcaaaatcacgtgaataaacaga---aaaaatttccagaat-cacaaagaa 27245589  T
Q  334 aaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||| ||||||||| ||| ||| ||||||||||||||||||    
T  27245588 aaccataaccgtaaacacaaaacctagatccataaggatct 27245548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 236 - 374
Target Start/End: Complemental strand, 27257547 - 27257411
Alignment:
Q  236 aggtaaaactcagaatcttttctcaaaaaata-atcatagtttaaacctgcaaaatcacgcgag-aaacagatctaaaaatttccagaattcaaagagaa 333  Q
    |||||||||||||||||| |  |||||||  | ||||||||||||||||||||||||||| ||  |||||||   ||||||||||||||| || | ||||    
T  27257547 aggtaaaactcagaatctctcttcaaaaataatatcatagtttaaacctgcaaaatcacgtgaataaacaga---aaaaatttccagaat-cacaaagaa 27257452  T
Q  334 aaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||| ||||||||| ||| ||| ||||||||||||||||||    
T  27257451 aaccataaccgtaaacacaaaacctagatccataaggatct 27257411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 204 - 374
Target Start/End: Complemental strand, 2651158 - 2650988
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaa----ataatcatagtttaaacctgcaaaatcacgcgaga 299  Q
    |||||||||| ||| |||||||||||||| | ||||||||||||   || | | | |||||    ||||||| |||| ||||||| |||||||||||||     
T  2651158 tttcctccatcaaaagtttcaaccaaaacttcaggtaaaactcattttcctcttttaaaaagtttataatcacagtt-aaacctgtaaaatcacgcgagc 2651060  T
Q  300 aa-cagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    || || |||  |||||||||||||||||||||  ||||| ||||||||| ||||||| ||||||||||||||||||    
T  2651059 aagcatatc--aaaatttccagaattcaaaga--aaaccataaccgtaaacacgaaacctagatccataaggatct 2650988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 7986566 - 7986618
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatctttt 256  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  7986566 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcatactctttt 7986618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 30548968 - 30548916
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatctttt 256  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  30548968 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcatactctttt 30548916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 30564232 - 30564180
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatctttt 256  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  30564232 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcatactctttt 30564180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 332 - 374
Target Start/End: Original strand, 16563661 - 16563703
Alignment:
Q  332 aaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||||||||||| ||| ||||||||||||||||||||||    
T  16563661 aaaaccgtaaccgtaaacacaaaatctagatccataaggatct 16563703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 373
Target Start/End: Original strand, 16668133 - 16668274
Alignment:
Q  236 aggtaaaactcagaatcttttctcaaaaaata--atcatagtttaaacctgcaaaa--tcacgcgagaaaca-gatctaaaaatttccagaattcaaaga 330  Q
    ||||||||||||||| || || |||| |||||  ||||||||||||||||| ||||  |||||  ||||| | ||||  ||||||||||||||||| |||    
T  16668133 aggtaaaactcagaacctcttttcaacaaatagtatcatagtttaaacctgtaaaaaatcacgtaagaaagaagatc--aaaatttccagaattcagaga 16668230  T
Q  331 gaaaaccgtaaccgtaagca-cgaaatctagatccataaggatc 373  Q
    ||||||  ||||||||| || | ||| |||||||| ||||||||    
T  16668231 gaaaactataaccgtaaacatcaaaacctagatccgtaaggatc 16668274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 5246005 - 5246060
Alignment:
Q  240 aaaactcagaatcttttctcaaaaaataatcatagtttaaacctgcaaaatcacgc 295  Q
    ||||||||||| || ||  ||||| | |||||||||||||||||||||||||||||    
T  5246005 aaaactcagaacctctttacaaaataaaatcatagtttaaacctgcaaaatcacgc 5246060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 16935136 - 16935081
Alignment:
Q  240 aaaactcagaatcttttctcaaaaaataatcatagtttaaacctgcaaaatcacgc 295  Q
    ||||||||||| || ||  ||||| | |||||||||||||||||||||||||||||    
T  16935136 aaaactcagaacctctttgcaaaataaaatcatagtttaaacctgcaaaatcacgc 16935081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 16950245 - 16950190
Alignment:
Q  240 aaaactcagaatcttttctcaaaaaataatcatagtttaaacctgcaaaatcacgc 295  Q
    ||||||||||| || ||  ||||| | |||||||||||||||||||||||||||||    
T  16950245 aaaactcagaacctctttgcaaaataaaatcatagtttaaacctgcaaaatcacgc 16950190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 373
Target Start/End: Original strand, 16683415 - 16683556
Alignment:
Q  236 aggtaaaactcagaatcttttctcaaaaaata--atcatagtttaaacctgcaaaa--tcacgcgagaaaca-gatctaaaaatttccagaattcaaaga 330  Q
    ||||||||||||||| || || |||| |||||  ||||||||||||||||| ||||  |||||  || || | ||||  ||||||||||||||||| |||    
T  16683415 aggtaaaactcagaacctcttttcaacaaatagtatcatagtttaaacctgtaaaaaatcacgtaagcaagaagatc--aaaatttccagaattcagaga 16683512  T
Q  331 gaaaaccgtaaccgtaagca-cgaaatctagatccataaggatc 373  Q
    ||||||  ||||||||| || | ||| |||||||| ||||||||    
T  16683513 gaaaactataaccgtaaacatcaaaacctagatccgtaaggatc 16683556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 4753589 - 4753528
Alignment:
Q  313 atttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||||||||||||  ||  |||||||||||| ||  ||| ||||||||||||||||||    
T  4753589 atttccagaattcaaagccaaggccgtaaccgtaaacataaaacctagatccataaggatct 4753528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 4767048 - 4767109
Alignment:
Q  313 atttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||||||||||||  ||  |||||||||||| ||  ||| ||||||||||||||||||    
T  4767048 atttccagaattcaaagccaaggccgtaaccgtaaacataaaacctagatccataaggatct 4767109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 4782203 - 4782264
Alignment:
Q  313 atttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||||||||||||  ||  |||||||||||| ||  ||| ||||||||||||||||||    
T  4782203 atttccagaattcaaagccaaggccgtaaccgtaaacataaaacctagatccataaggatct 4782264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 4786115 - 4786054
Alignment:
Q  313 atttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||||||||||||  ||  |||||||||||| ||  ||| ||||||||||||||||||    
T  4786115 atttccagaattcaaagccaaggccgtaaccgtaaacataaaacctagatccataaggatct 4786054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 26783153 - 26783214
Alignment:
Q  313 atttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||||||||||||||||    || |||||||||||| ||| ||| ||||||||||||||||||    
T  26783153 atttccagaattcaaaagcgaagccgtaaccgtaaacacaaaacctagatccataaggatct 26783214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 26795125 - 26795186
Alignment:
Q  313 atttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||||||||||||||||    || |||||||||||| ||| ||| ||||||||||||||||||    
T  26795125 atttccagaattcaaaagcgaagccgtaaccgtaaacacaaaacctagatccataaggatct 26795186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 27479140 - 27479201
Alignment:
Q  313 atttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||||||||||||||||    || |||||||||||| ||| ||| ||||||||||||||||||    
T  27479140 atttccagaattcaaaagcgaagccgtaaccgtaaacacaaaacctagatccataaggatct 27479201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 27494394 - 27494455
Alignment:
Q  313 atttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||||||||||||||||    || |||||||||||| ||| ||| ||||||||||||||||||    
T  27494394 atttccagaattcaaaagcgaagccgtaaccgtaaacacaaaacctagatccataaggatct 27494455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 2e-59; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 172 - 374
Target Start/End: Complemental strand, 20329490 - 20329282
Alignment:
Q  172 cagaaaacaacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatct-tttctcaaaaaata--a 268  Q
    ||||||||| |||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||  |    
T  20329490 cagaaaaca-cagaataaagtttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatctctttctcagaaaataata 20329392  T
Q  269 tcatagtttaaacctg--caaaatcacgc--gagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatcc 364  Q
    ||||||||||||||||   ||||||||||  | ||||||||||||||||||||||||||||||||| || ||||||||||||| ||| ||| ||||||||    
T  20329391 tcatagtttaaacctgtaaaaaatcacgcaagcgaaacagatctaaaaatttccagaattcaaagataagaccgtaaccgtaaacacaaaacctagatcc 20329292  T
Q  365 ataaggatct 374  Q
    ||||||||||    
T  20329291 ataaggatct 20329282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 172 - 374
Target Start/End: Complemental strand, 20336519 - 20336311
Alignment:
Q  172 cagaaaacaacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatct-tttctcaaaaaata--a 268  Q
    ||||||||| |||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||  |    
T  20336519 cagaaaaca-cagaataaagtttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatctctttctcagaaaataata 20336421  T
Q  269 tcatagtttaaacctg--caaaatcacgc--gagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatcc 364  Q
    ||||||||||||||||   ||||||||||  | ||||||||||||||||||||||||||||||||| || ||||||||||||| ||| ||| ||||||||    
T  20336420 tcatagtttaaacctgtaaaaaatcacgcaagcgaaacagatctaaaaatttccagaattcaaagataagaccgtaaccgtaaacacaaaacctagatcc 20336321  T
Q  365 ataaggatct 374  Q
    ||||||||||    
T  20336320 ataaggatct 20336311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 197 - 374
Target Start/End: Original strand, 19367194 - 19367373
Alignment:
Q  197 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata--atcatagtttaaacctg-caaaatcac 293  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||| | | |||| |  |||||  |||||||||||||||||  ||||||||    
T  19367194 ccaaagattttctccattaaaggtttcaaccaaaacctcaggtaaaactcagattttcttcttaggaaataatatcatagtttaaacctgtaaaaatcac 19367293  T
Q  294 gcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||||| || || ||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||    
T  19367294 gcgagcaagcatatcaaaaaatttccagaattcaa--agaaaaccgtaaccgtaagcacgaaacctagatccataaggatct 19367373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 4999857 - 4999940
Alignment:
Q  12 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4999857 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 4999940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 5014936 - 5015019
Alignment:
Q  12 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5014936 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 5015019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 200 - 330
Target Start/End: Complemental strand, 763116 - 762984
Alignment:
Q  200 aagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaat--aatcatagtttaaacctgcaaaatcacgcga 297  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||| |||||  ||||| |||||||||| | ||||||||||||    
T  763116 aagatttcctccattaaaggtttcaaccaaaacctcaggtaaaactcagaatctcttttcagaaaataaaatcacagtttaaacccgtaaaatcacgcga 763017  T
Q  298 g-aaacagatctaaaaatttccagaattcaaaga 330  Q
    | || || ||| ||||||||||||||||||||||    
T  763016 gcaagcatatc-aaaaatttccagaattcaaaga 762984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 204 - 374
Target Start/End: Original strand, 43150426 - 43150601
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaat----aatcatagtttaaacctgcaaaatcacgcgag- 298  Q
    |||||||||| ||| |||||||||||||| | ||||||||||||   || | | | ||||| |    ||||| |||||||||| | |||||||||| ||     
T  43150426 tttcctccatcaaaagtttcaaccaaaacttcaggtaaaactcatcttcctcttttaaaaagtttaaaatcacagtttaaacccgtaaaatcacgcaagc 43150525  T
Q  299 aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||||||||||||||||||||||||||  ||| |||||||||||| ||| ||| ||||||||||||||||||    
T  43150526 aaacagatctaaaaatttccagaattcaaaggtaaagccgtaaccgtaaacacaaaacctagatccataaggatct 43150601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 236 - 374
Target Start/End: Complemental strand, 18791587 - 18791446
Alignment:
Q  236 aggtaaaactcagaatcttttctcaaaaaataa--tcatagtttaaacctgcaaaa-tcacgcgagaaacagatctaaaaatttccagaattcaaagaga 332  Q
    ||||||||||||||| || || |||| ||||||  |||||||||||||||| |||| |||||| || |||||||| |||| ||||||||| ||||||| |    
T  18791587 aggtaaaactcagaacctcttttcaacaaataaaatcatagtttaaacctgtaaaaatcacgcaagcaacagatccaaaa-tttccagaactcaaagaca 18791489  T
Q  333 aaa-ccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||| |||||||||||| ||| ||| ||||||||||||||||||    
T  18791488 aaaaccgtaaccgtaaacacaaaacctagatccataaggatct 18791446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 236 - 374
Target Start/End: Complemental strand, 18806215 - 18806074
Alignment:
Q  236 aggtaaaactcagaatcttttctcaaaaaataa--tcatagtttaaacctgcaaaa-tcacgcgagaaacagatctaaaaatttccagaattcaaagaga 332  Q
    ||||||||||||||| || || |||| ||||||  |||||||||||||||| |||| |||||| || |||||||| |||| ||||||||| ||||||| |    
T  18806215 aggtaaaactcagaacctcttttcaacaaataaaatcatagtttaaacctgtaaaaatcacgcaagcaacagatccaaaa-tttccagaactcaaagaca 18806117  T
Q  333 aaa-ccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||| |||||||||||| ||| ||| ||||||||||||||||||    
T  18806116 aaaaccgtaaccgtaaacacaaaacctagatccataaggatct 18806074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 204 - 374
Target Start/End: Original strand, 30747724 - 30747903
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata---atcatagtttaaacctgca------aaatcacg 294  Q
    |||||||||||||| |||||||||||||| | ||||||||||||   |||| ||| | ||| ||   ||||  ||||||||||| |      ||||||||    
T  30747724 tttcctccattaaaagtttcaaccaaaacttcaggtaaaactcattttcttctcttagaaagtattaatcacggtttaaacctgtagaagaaaaatcacg 30747823  T
Q  295 cgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    | || | ||||||||||||||||||||||||||||| || || |||||||||| ||| ||| ||||||||||||||||||    
T  30747824 caagcagcagatctaaaaatttccagaattcaaagataagactgtaaccgtaaacacaaaacctagatccataaggatct 30747903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 204 - 374
Target Start/End: Original strand, 30763029 - 30763208
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata---atcatagtttaaacctgca------aaatcacg 294  Q
    |||||||||||||| |||||||||||||| | ||||||||||||   |||| ||| | ||| ||   ||||  ||||||||||| |      ||||||||    
T  30763029 tttcctccattaaaagtttcaaccaaaacttcaggtaaaactcattttcttctcttagaaagtattaatcacggtttaaacctgtagaagaaaaatcacg 30763128  T
Q  295 cgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    | || | ||||||||||||||||||||||||||||| || || |||||||||| ||| ||| ||||||||||||||||||    
T  30763129 caagcagcagatctaaaaatttccagaattcaaagataagactgtaaccgtaaacacaaaacctagatccataaggatct 30763208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 268 - 374
Target Start/End: Complemental strand, 14750437 - 14750330
Alignment:
Q  268 atcatagtttaaacctgcaaaa-tcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatcca 365  Q
    ||||||||||||||||| |||| |||||| || |||||||||||||| ||||||||||||||||  ||| |||||||||||| ||| ||| |||||||||    
T  14750437 atcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaa-tttccagaattcaaaggtaaagccgtaaccgtaaacacaaaacctagatcca 14750339  T
Q  366 taaggatct 374  Q
    |||||||||    
T  14750338 taaggatct 14750330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 268 - 374
Target Start/End: Complemental strand, 14769540 - 14769433
Alignment:
Q  268 atcatagtttaaacctgcaaaa-tcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatcca 365  Q
    ||||||||||||||||| |||| |||||| || |||||||||||||| ||||||||||||||||  ||| |||||||||||| ||| ||| |||||||||    
T  14769540 atcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaa-tttccagaattcaaaggtaaagccgtaaccgtaaacacaaaacctagatcca 14769442  T
Q  366 taaggatct 374  Q
    |||||||||    
T  14769441 taaggatct 14769433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 208 - 261
Target Start/End: Complemental strand, 4565552 - 4565499
Alignment:
Q  208 ctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaa 261  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  4565552 ctccattgaaggtttcaaccaaaaccttaggtaaaactcagaatctcttctcaa 4565499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 21963697 - 21963749
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatctttt 256  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  21963697 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcatactctttt 21963749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 21978947 - 21978999
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatctttt 256  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  21978947 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcatactctttt 21978999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 204 - 374
Target Start/End: Complemental strand, 33664801 - 33664623
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata---atcatagtttaaacctgca------aaatcacg 294  Q
    |||||||||||||| |||||||||||||| | ||||||||||||   |||| ||| | ||| ||   ||||  ||||||||||| |      ||||||||    
T  33664801 tttcctccattaaaagtttcaaccaaaacttcaggtaaaactcattttcttctcttagaaagtattaatcacggtttaaacctgtagaagaaaaatcacg 33664702  T
Q  295 cgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    | || | ||||||||||| ||||||||||||||||| ||    |||||||||| ||| ||| ||||||||||||||||||    
T  33664701 caagcagcagatctaaaa-tttccagaattcaaagataaggttgtaaccgtaaacacaaaacctagatccataaggatct 33664623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 204 - 374
Target Start/End: Complemental strand, 33683613 - 33683435
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata---atcatagtttaaacctgca------aaatcacg 294  Q
    |||||||||||||| |||||||||||||| | ||||||||||||   |||| ||| | ||| ||   ||||  ||||||||||| |      ||||||||    
T  33683613 tttcctccattaaaagtttcaaccaaaacttcaggtaaaactcattttcttctcttagaaagtattaatcacggtttaaacctgtagaagaaaaatcacg 33683514  T
Q  295 cgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    | || | ||||||||||| ||||||||||||||||| ||    |||||||||| ||| ||| ||||||||||||||||||    
T  33683513 caagcagcagatctaaaa-tttccagaattcaaagataaggttgtaaccgtaaacacaaaacctagatccataaggatct 33683435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 295
Target Start/End: Original strand, 5000075 - 5000134
Alignment:
Q  236 aggtaaaactcagaatcttttctcaaaaaataatcatagtttaaacctgcaaaatcacgc 295  Q
    ||||||||||||||| || ||  ||||| | |||||||||||||||||||||||||||||    
T  5000075 aggtaaaactcagaacctctttacaaaataaaatcatagtttaaacctgcaaaatcacgc 5000134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 295
Target Start/End: Original strand, 5015154 - 5015213
Alignment:
Q  236 aggtaaaactcagaatcttttctcaaaaaataatcatagtttaaacctgcaaaatcacgc 295  Q
    ||||||||||||||| || ||  ||||| | |||||||||||||||||||||||||||||    
T  5015154 aggtaaaactcagaacctctttacaaaataaaatcatagtttaaacctgcaaaatcacgc 5015213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 332 - 374
Target Start/End: Original strand, 5703885 - 5703927
Alignment:
Q  332 aaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||||||||||| ||| ||||||||||||||||||||||    
T  5703885 aaaaccgtaaccgtaaacacaaaatctagatccataaggatct 5703927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 374
Target Start/End: Complemental strand, 36321236 - 36321150
Alignment:
Q  286 aaaatcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||||| || |||||||||||||| ||||||||||  | ||| ||| |||||||||||| ||| ||| ||||||||||||||||||    
T  36321236 aaaatcacgcaagcaaacagatctaaaa-tttccagaat--atagataaagccgtaaccgtaaacacaaaacctagatccataaggatct 36321150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 374
Target Start/End: Complemental strand, 36335445 - 36335359
Alignment:
Q  286 aaaatcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||||| || |||||||||||||| ||||||||||  | ||| ||| |||||||||||| ||| ||| ||||||||||||||||||    
T  36335445 aaaatcacgcaagcaaacagatctaaaa-tttccagaat--atagataaagccgtaaccgtaaacacaaaacctagatccataaggatct 36335359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 374
Target Start/End: Complemental strand, 36350535 - 36350449
Alignment:
Q  286 aaaatcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||||| || |||||||||||||| ||||||||||  | ||| ||| |||||||||||| ||| ||| ||||||||||||||||||    
T  36350535 aaaatcacgcaagcaaacagatctaaaa-tttccagaat--atagataaagccgtaaccgtaaacacaaaacctagatccataaggatct 36350449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 33675760 - 33675821
Alignment:
Q  313 atttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||||||||||||  ||  |||||||||||| ||| ||| ||||||||||||||||||    
T  33675760 atttccagaattcaaagccaaggccgtaaccgtaaacacaaaacctagatccataaggatct 33675821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 54827434 - 54827477
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactca 247  Q
    |||||||||||||| |||||||||||||| | ||||||||||||    
T  54827434 tttcctccattaaaagtttcaaccaaaacttcaggtaaaactca 54827477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 54842661 - 54842704
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactca 247  Q
    |||||||||||||| |||||||||||||| | ||||||||||||    
T  54842661 tttcctccattaaaagtttcaaccaaaacttcaggtaaaactca 54842704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 109; Significance: 1e-54; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 171 - 374
Target Start/End: Original strand, 28643058 - 28643264
Alignment:
Q  171 tcagaaaacaacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata--a 268  Q
    |||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||  |    
T  28643058 tcagaaaaca-cagaatcaagtttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataatcttttctcagaaaataata 28643156  T
Q  269 tcatagtttaaacctg--caaaatcacgcgag-aaacagatc-taaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatcc 364  Q
    ||||||||||| ||||   |||||||||| || || || |||  |||||||||||||||||||  |||||||||||||||||||||||||| ||||||||    
T  28643157 tcatagtttaaccctgtaaaaaatcacgcaagcaagcatatcaaaaaaatttccagaattcaa--agaaaaccgtaaccgtaagcacgaaacctagatcc 28643254  T
Q  365 ataaggatct 374  Q
    ||||||||||    
T  28643255 ataaggatct 28643264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 171 - 374
Target Start/End: Original strand, 28658463 - 28658669
Alignment:
Q  171 tcagaaaacaacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata--a 268  Q
    |||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||  |    
T  28658463 tcagaaaaca-cagaatcaagtttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataatcttttctcagaaaataata 28658561  T
Q  269 tcatagtttaaacctg--caaaatcacgcgag-aaacagatc-taaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatcc 364  Q
    ||||||||||| ||||   |||||||||| || || || |||  |||||||||||||||||||  |||||||||||||||||||||||||| ||||||||    
T  28658562 tcatagtttaaccctgtaaaaaatcacgcaagcaagcatatcaaaaaaatttccagaattcaa--agaaaaccgtaaccgtaagcacgaaacctagatcc 28658659  T
Q  365 ataaggatct 374  Q
    ||||||||||    
T  28658660 ataaggatct 28658669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 180 - 374
Target Start/End: Complemental strand, 13433574 - 13433376
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa--aataatcatagttt 277  Q
    |||||||||||  | | |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| || ||||||    ||||||||||||    
T  13433574 aacagaatcaaagttttccaaagatttcctccattcaaggtttcaaccaaaaccttaggtaaaactcataatctcttttcaaaagtgttaatcatagttt 13433475  T
Q  278 aaacctgcaa--aatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatc 373  Q
    ||||||| ||  |||||||||||  || || ||| |||||||||||||||||||  |||||||||||||||||| ||||||| |||||||||||||||||    
T  13433474 aaacctgtaaacaatcacgcgagcaaagcatatcaaaaaatttccagaattcaa--agaaaaccgtaaccgtaaacacgaaacctagatccataaggatc 13433377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 180 - 374
Target Start/End: Complemental strand, 13444468 - 13444270
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa--aataatcatagttt 277  Q
    |||||||||||  | | |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| || ||||||    ||||||||||||    
T  13444468 aacagaatcaaagttttccaaagatttcctccattcaaggtttcaaccaaaaccttaggtaaaactcataatctcttttcaaaagtgttaatcatagttt 13444369  T
Q  278 aaacctgcaa--aatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatc 373  Q
    ||||||| ||  |||||||||||  || || ||| |||||||||||||||||||  |||||||||||||||||| ||||||| |||||||||||||||||    
T  13444368 aaacctgtaaacaatcacgcgagcaaagcatatcaaaaaatttccagaattcaa--agaaaaccgtaaccgtaaacacgaaacctagatccataaggatc 13444271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 187 - 374
Target Start/End: Complemental strand, 32587246 - 32587058
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa-aataatcatagtttaaacctgc 285  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||  | ||||||||      
T  32587246 tcaagttttcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaagtattatcactg-ttaaacctaa 32587148  T
Q  286 aaa--atcacgcgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||  ||||||| || ||||||||  ||||||||||||| |||||||  ||||||||||||||| ||| ||| ||||||||||||||||||    
T  32587147 aaaatatcacgcaagcaacagatc-caaaatttccagaactcaaagacgaaaccgtaaccgtaaacacaaaacctagatccataaggatct 32587058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 187 - 374
Target Start/End: Complemental strand, 32605675 - 32605487
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa-aataatcatagtttaaacctgc 285  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||  | ||||||||      
T  32605675 tcaagttttcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaagtattatcactg-ttaaacctaa 32605577  T
Q  286 aaa--atcacgcgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||  ||||||| || ||||||||  ||||||||||||| |||||||  ||||||||||||||| ||| ||| ||||||||||||||||||    
T  32605576 aaaatatcacgcaagcaacagatc-caaaatttccagaactcaaagacgaaaccgtaaccgtaaacacaaaacctagatccataaggatct 32605487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 204 - 374
Target Start/End: Original strand, 42136840 - 42137011
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata--atcatagtttaaacctg-caaaatcacgcgag-a 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||  |||||||||||||||||  ||||||||||||| |    
T  42136840 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatctcttctcagaaaataatatcatagtttaaacctgtaaaaatcacgcgagca 42136939  T
Q  300 aacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    | || ||| |||||||||||||||||||  ||||| | |||||||||| ||| ||| ||||||||||||||||||    
T  42136940 agcatatc-aaaaatttccagaattcaa--agaaagctgtaaccgtaaacacaaaacctagatccataaggatct 42137011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 180 - 374
Target Start/End: Original strand, 24675297 - 24675493
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaa---ataatcatagtt 276  Q
    |||||||||||  | | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||    ||||||||| |    
T  24675297 aacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataatctcttttcaaaaagtgttaatcatag-t 24675395  T
Q  277 taaacctgcaa--aatcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatc 373  Q
    ||| |||| ||  |||||||  || || || ||| |||||||||||||||||||  |||||||||||||||||| ||||||| |||||||||||||||||    
T  24675396 taagcctgtaaacaatcacgtaagcaagcatatc-aaaaatttccagaattcaa--agaaaaccgtaaccgtaaacacgaaacctagatccataaggatc 24675492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 180 - 374
Target Start/End: Original strand, 24717824 - 24718020
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaa---ataatcatagtt 276  Q
    |||||||||||  | | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||    ||||||||| |    
T  24717824 aacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataatctcttttcaaaaagtgttaatcatag-t 24717922  T
Q  277 taaacctgcaa--aatcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatc 373  Q
    ||| |||| ||  |||||||  || || || ||| |||||||||||||||||||  |||||||||||||||||| ||||||| |||||||||||||||||    
T  24717923 taagcctgtaaacaatcacgtaagcaagcatatc-aaaaatttccagaattcaa--agaaaaccgtaaccgtaaacacgaaacctagatccataaggatc 24718019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 180 - 374
Target Start/End: Original strand, 24733284 - 24733480
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaa---ataatcatagtt 276  Q
    |||||||||||  | | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||    ||||||||| |    
T  24733284 aacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataatctcttttcaaaaagtgttaatcatag-t 24733382  T
Q  277 taaacctgcaa--aatcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatc 373  Q
    ||| |||| ||  |||||||  || || || ||| |||||||||||||||||||  |||||||||||||||||| ||||||| |||||||||||||||||    
T  24733383 taagcctgtaaacaatcacgtaagcaagcatatc-aaaaatttccagaattcaa--agaaaaccgtaaccgtaaacacgaaacctagatccataaggatc 24733479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 180 - 374
Target Start/End: Original strand, 6868354 - 6868547
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctca-aaaaataatcatagttta 278  Q
    |||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |  ||||  | |||    
T  6868354 aacagaatcaagatttcc-aaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataaacttttctcagaaataatatcactg-tta 6868451  T
Q  279 aacctgcaaaatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||  |||||||||| ||  ||| |||||  ||||||||||||||||||||  |||||||||||||||| ||| ||| ||||||||||||||||||    
T  6868452 aacct-aaaaatcacgcaagcaaaatagatc-caaaatttccagaattcaaagccaaaaccgtaaccgtaaacacaaaacctagatccataaggatct 6868547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 180 - 374
Target Start/End: Original strand, 6883478 - 6883671
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctca-aaaaataatcatagttta 278  Q
    |||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |  ||||  | |||    
T  6883478 aacagaatcaagatttcc-aaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataaacttttctcagaaataatatcactg-tta 6883575  T
Q  279 aacctgcaaaatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||  |||||||||| ||  ||| |||||  ||||||||||||||||||||  |||||||||||||||| ||| ||| ||||||||||||||||||    
T  6883576 aacct-aaaaatcacgcaagcaaaatagatc-caaaatttccagaattcaaagccaaaaccgtaaccgtaaacacaaaacctagatccataaggatct 6883671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 268 - 371
Target Start/End: Complemental strand, 29892930 - 29892828
Alignment:
Q  268 atcatagtttaaacctgcaaaatcacgcgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccata 367  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||| ||| |||||||||||    
T  29892930 atcatagtttaa-cctgtaaaatcacgcgagaaacagatctaaaaatttccagaattcaaagataagaccgtaaccgtaaacacaaaacctagatccata 29892832  T
Q  368 agga 371  Q
    ||||    
T  29892831 agga 29892828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 187 - 374
Target Start/End: Original strand, 30143699 - 30143891
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa--aataatcatagtttaaacctg 284  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| ||||  | |||||||||    
T  30143699 tcaagttttcccaaagatttcctccattaaaggtttcaaccagaaccttaggtaaaactcagaatcttttctcaaaagtaat-atcactg-ttaaacctg 30143796  T
Q  285 -----caaaatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
          | |||||||| ||  || |  ||| |||||||||||||||||||  ||||| |||||||||||| ||||||| ||||||||||||||||||    
T  30143797 tagaaaacaatcacgcaagcaaagcgtatcaaaaaatttccagaattcaa--agaaagccgtaaccgtaaacacgaaacctagatccataaggatct 30143891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 187 - 374
Target Start/End: Original strand, 30177749 - 30177941
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa--aataatcatagtttaaacctg 284  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| ||||  | |||||||||    
T  30177749 tcaagttttcccaaagatttcctccattaaaggtttcaaccagaaccttaggtaaaactcagaatcttttctcaaaagtaat-atcactg-ttaaacctg 30177846  T
Q  285 -----caaaatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
          | |||||||| ||  || |  ||| |||||||||||||||||||  ||||| |||||||||||| ||||||| ||||||||||||||||||    
T  30177847 tagaaaacaatcacgcaagcaaagcgtatcaaaaaatttccagaattcaa--agaaagccgtaaccgtaaacacgaaacctagatccataaggatct 30177941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 37777483 - 37777400
Alignment:
Q  12 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 95  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37777483 cacagaatcaatttcctcgcaattcgaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaaacagt 37777400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 37743401 - 37743318
Alignment:
Q  12 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 95  Q
    ||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  37743401 cacagaatcaatttcctcgcaattcgaagtgcgagttcttcactgaaacgcgacgaactcaagcactgatcacgaggaaacagt 37743318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 197 - 295
Target Start/End: Complemental strand, 13315683 - 13315582
Alignment:
Q  197 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaa---ataatcatagtttaaacctgcaaaatcac 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||    |||||||||||| |||||| ||||||||    
T  13315683 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataatctcttttcaaaaagtgttaatcatagtttgaacctgtaaaatcac 13315584  T
Q  294 gc 295  Q
    ||    
T  13315583 gc 13315582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 197 - 295
Target Start/End: Complemental strand, 13331010 - 13330909
Alignment:
Q  197 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaa---ataatcatagtttaaacctgcaaaatcac 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||    |||||||||||| |||||| ||||||||    
T  13331010 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataatctcttttcaaaaagtgttaatcatagtttgaacctgtaaaatcac 13330911  T
Q  294 gc 295  Q
    ||    
T  13330910 gc 13330909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 180 - 374
Target Start/End: Complemental strand, 24786447 - 24786248
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaa---ataatcatagtt 276  Q
    |||||||||||  | | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||    |||||||||||    
T  24786447 aacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataatctattttcaaaaagtgttaatcatagtt 24786348  T
Q  277 taaacctgcaa--aatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggat 372  Q
    |||||| | ||  |||||||| ||  || || |||| | | ||||||||| ||| | ||||| || ||||||||| ||| ||| ||||||||||||||||    
T  24786347 taaaccggtaaacaatcacgcaagcaaagcatatct-agattttccagaa-tcacaaagaaagccataaccgtaaacacaaaacctagatccataaggat 24786250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 180 - 289
Target Start/End: Original strand, 28912272 - 28912382
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata--atcatagttt 277  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||  | |||||| | ||||||  ||||||||||    
T  28912272 aacagaatcaagttttcc-aaagatttcctccattaaaggtttcaaccaaaacctcaggtaaaactcagttttttttcttagaaaatagtatcatagttt 28912370  T
Q  278 aaacctgcaaaa 289  Q
    ||||||| ||||    
T  28912371 aaacctgtaaaa 28912382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 180 - 289
Target Start/End: Original strand, 28927540 - 28927650
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata--atcatagttt 277  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||  | |||||| | ||||||  ||||||||||    
T  28927540 aacagaatcaagttttcc-aaagatttcctccattaaaggtttcaaccaaaacctcaggtaaaactcagttttttttcttagaaaatagtatcatagttt 28927638  T
Q  278 aaacctgcaaaa 289  Q
    ||||||| ||||    
T  28927639 aaacctgtaaaa 28927650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 180 - 374
Target Start/End: Complemental strand, 15649719 - 15649528
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaataatcatagtttaa 279  Q
    |||||||||||||| ||| | |||||| ||| || ||| |||||||||||||| | |||||||||||||||||| |  |||||| |  ||||||||||||    
T  15649719 aacagaatcaagttttcc-agagattttctctatcaaaagtttcaaccaaaac-tcaggtaaaactcagaatctctcttcaaaataatatcatagtttaa 15649622  T
Q  280 acctgcaaaatcacgcg-agaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||||||||||||||| | | ||||| |||| ||| ||||||||| ||| | |||||||| ||||||||| ||| ||| |||||||| |||||||||    
T  15649621 acctgcaaaatcacgtgaataaacaaatct-aaattttccagaa-tcacaaagaaaaccataaccgtaaacacaaaacctagatccctaaggatct 15649528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 180 - 374
Target Start/End: Complemental strand, 15665095 - 15664904
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaataatcatagtttaa 279  Q
    |||||||||||||| ||| | |||||| ||| || ||| |||||||||||||| | |||||||||||||||||| |  |||||| |  ||||||||||||    
T  15665095 aacagaatcaagttttcc-agagattttctctatcaaaagtttcaaccaaaac-tcaggtaaaactcagaatctctcttcaaaataatatcatagtttaa 15664998  T
Q  280 acctgcaaaatcacgcg-agaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||||||||||||||| | | ||||| |||| ||| ||||||||| ||| | |||||||| ||||||||| ||| ||| |||||||| |||||||||    
T  15664997 acctgcaaaatcacgtgaataaacaaatct-aaattttccagaa-tcacaaagaaaaccataaccgtaaacacaaaacctagatccctaaggatct 15664904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 197 - 374
Target Start/End: Original strand, 31425393 - 31425571
Alignment:
Q  197 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaa---ataatcatagtttaaacctg-caaaatca 292  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||    |||||||||||| ||||||  |||||||    
T  31425393 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataatctcttttcaaaaagtgttaatcatagtttgaacctgtaaaaatca 31425492  T
Q  293 cgcgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagca-cgaaatctagatccataaggatct 374  Q
    ||| ||  |   || | |||| |||||||||    | |||||||| |||||||||  | ||||||||||||||||||||||||    
T  31425493 cgcaagcgaagtatatcaaaaattccagaat----acagaaaaccataaccgtaaaaagcgaaatctagatccataaggatct 31425571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 197 - 374
Target Start/End: Original strand, 31440731 - 31440909
Alignment:
Q  197 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaa---ataatcatagtttaaacctg-caaaatca 292  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||    |||||||||||| ||||||  |||||||    
T  31440731 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataatctcttttcaaaaagtgttaatcatagtttgaacctgtaaaaatca 31440830  T
Q  293 cgcgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagca-cgaaatctagatccataaggatct 374  Q
    ||| ||  |   || | |||| |||||||||    | |||||||| |||||||||  | ||||||||||||||||||||||||    
T  31440831 cgcaagcgaagtatatcaaaaattccagaat----acagaaaaccataaccgtaaaaagcgaaatctagatccataaggatct 31440909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 276 - 374
Target Start/End: Original strand, 28572560 - 28572657
Alignment:
Q  276 ttaaacctgcaaaatcacgcgagaaa-cagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||||||| | |||||||||| || || || ||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||    
T  28572560 ttaaacccgtaaaatcacgcaagcaagcatatctaaaaatttccagaattcaaaga--aaaccgtaaccgtaagcacgaaacctagatccataaggatct 28572657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 373
Target Start/End: Original strand, 37725988 - 37726171
Alignment:
Q  197 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata--atcatagttt-aaacctg----caaaa 289  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||  | | |||| | ||||||  |||||||||| |||||||     ||||    
T  37725988 ccaaagattttctccattaaaggtttcaaccaaaacctcaggtaaaactcagtttttcttcttagaaaatagtatcatagtttaaaacctgtcaaaaaaa 37726087  T
Q  290 tcacgcgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagca-cgaaatctagatccataaggatc 373  Q
    |||||| || ||||||||  ||||||||||||| ||||||| ||||| |||||||||| || | ||| |||||||| ||||||||    
T  37726088 tcacgcaagcaacagatc-caaaatttccagaactcaaagacaaaactgtaaccgtaaacatcaaaacctagatccgtaaggatc 37726171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 180 - 260
Target Start/End: Original strand, 5632016 - 5632095
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctca 260  Q
    |||||||||||| | ||| |||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  5632016 aacagaatcaagatttcc-aaagttttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataaacttttctca 5632095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 180 - 260
Target Start/End: Original strand, 5646890 - 5646969
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctca 260  Q
    |||||||||||| | ||| |||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  5646890 aacagaatcaagatttcc-aaagttttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataaacttttctca 5646969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 236 - 374
Target Start/End: Original strand, 43072248 - 43072389
Alignment:
Q  236 aggtaaaactcagaatcttttctcaaaaaataa--tcatagtttaaacctgcaaaa-tcacgcgagaaacagatctaaaaatttccagaattcaaagaga 332  Q
    ||||||||||||||| || || |||| ||||||  |||||||||||||||| |||| |||||| || |||||||| |||| ||||||||| ||||||| |    
T  43072248 aggtaaaactcagaacctcttttcaacaaataaaatcatagtttaaacctgtaaaaatcacgcaagcaacagatccaaaa-tttccagaactcaaagaca 43072346  T
Q  333 aaa-ccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||| ||| |||||||| ||| ||| ||||||||||||||||||    
T  43072347 aaaaccgcaaccgtaaacacaaaacctagatccataaggatct 43072389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 236 - 374
Target Start/End: Original strand, 43087535 - 43087676
Alignment:
Q  236 aggtaaaactcagaatcttttctcaaaaaataa--tcatagtttaaacctgcaaaa-tcacgcgagaaacagatctaaaaatttccagaattcaaagaga 332  Q
    ||||||||||||||| || || |||| ||||||  |||||||||||||||| |||| |||||| || |||||||| |||| ||||||||| ||||||| |    
T  43087535 aggtaaaactcagaacctcttttcaacaaataaaatcatagtttaaacctgtaaaaatcacgcaagcaacagatccaaaa-tttccagaactcaaagaca 43087633  T
Q  333 aaa-ccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||| ||| |||||||| ||| ||| ||||||||||||||||||    
T  43087634 aaaaccgcaaccgtaaacacaaaacctagatccataaggatct 43087676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 208 - 261
Target Start/End: Original strand, 3783527 - 3783580
Alignment:
Q  208 ctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaa 261  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  3783527 ctccattgaaggtttcaaccaaaaccttaggtaaaactcagaatctcttctcaa 3783580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 208 - 261
Target Start/End: Original strand, 3798882 - 3798935
Alignment:
Q  208 ctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaa 261  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  3798882 ctccattgaaggtttcaaccaaaaccttaggtaaaactcagaatctcttctcaa 3798935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 33510362 - 33510414
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatctttt 256  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  33510362 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcatactctttt 33510414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 33525625 - 33525677
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatctttt 256  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  33525625 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcatactctttt 33525677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 197 - 256
Target Start/End: Complemental strand, 29973270 - 29973211
Alignment:
Q  197 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatctttt 256  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||| | ||||||    
T  29973270 ccaaagaatttctccattaaaggtttcaaccaaaaccttaggtaaaactcatactctttt 29973211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 197 - 256
Target Start/End: Original strand, 30023373 - 30023432
Alignment:
Q  197 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatctttt 256  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||| | ||||||    
T  30023373 ccaaagaatttctccattaaaggtttcaaccaaaaccttaggtaaaactcatactctttt 30023432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 197 - 256
Target Start/End: Original strand, 30038637 - 30038696
Alignment:
Q  197 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatctttt 256  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||| | ||||||    
T  30038637 ccaaagaatttctccattaaaggtttcaaccaaaaccttaggtaaaactcatactctttt 30038696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 309 - 374
Target Start/End: Original strand, 5632152 - 5632215
Alignment:
Q  309 aaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||||||||||||||||||||||  |||| |||||||||| ||||||| ||||||||||||||||||    
T  5632152 aaaaatttccagaattcaaaga--aaactgtaaccgtaaacacgaaacctagatccataaggatct 5632215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 15749776 - 15749715
Alignment:
Q  313 atttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||||||||||||  ||| |||||||||||| ||| ||| ||||||||||||||||||    
T  15749776 atttccagaattcaaagccaaagccgtaaccgtaaacacaaaacctagatccataaggatct 15749715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 15765004 - 15764943
Alignment:
Q  313 atttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||||||||||||  ||| |||||||||||| ||| ||| ||||||||||||||||||    
T  15765004 atttccagaattcaaagccaaagccgtaaccgtaaacacaaaacctagatccataaggatct 15764943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 309 - 374
Target Start/End: Original strand, 5647026 - 5647089
Alignment:
Q  309 aaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||||||||| ||||||||||||  |||| |||||| ||| ||||||| ||||||||||||||||||    
T  5647026 aaaaatttcaagaattcaaaga--aaactgtaaccataaacacgaaacctagatccataaggatct 5647089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 374
Target Start/End: Complemental strand, 12056714 - 12056628
Alignment:
Q  286 aaaatcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||||| || |||||||||||||| |||||||||| ||  || ||| |||||||||||| ||| ||| ||||||||||||||||||    
T  12056714 aaaatcacgcaagcaaacagatctaaaa-tttccagaataca--gataaagccgtaaccgtaaacacaaaacctagatccataaggatct 12056628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 236 - 373
Target Start/End: Complemental strand, 18491582 - 18491440
Alignment:
Q  236 aggtaaaactcagaatcttttctcaaaaaata--atcatagtttaaacctgcaaaa--tcacgcgagaaaca-gatctaaaaatttccagaattcaaaga 330  Q
    ||||||||||||||| || || |||| |||||  ||||||||||||||||| ||||  |||||  || || | |||| |||||||||||||||||| |||    
T  18491582 aggtaaaactcagaacctcttttcaacaaatagtatcatagtttaaacctgtaaaaaatcacgtaagcaagaagatc-aaaaatttccagaattcagaga 18491484  T
Q  331 gaaaaccgtaaccgtaagca-cgaaatctagatccataaggatc 373  Q
    ||||||  ||||||||| || | ||| |||||||| ||||||||    
T  18491483 gaaaactataaccgtaaacatcaaaacctagatccgtaaggatc 18491440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 236 - 373
Target Start/End: Complemental strand, 18506897 - 18506755
Alignment:
Q  236 aggtaaaactcagaatcttttctcaaaaaata--atcatagtttaaacctgcaaaa--tcacgcgagaaaca-gatctaaaaatttccagaattcaaaga 330  Q
    ||||||||||||||| || || |||| |||||  ||||||||||||||||| ||||  |||||  || || | |||| |||||||||||||||||| |||    
T  18506897 aggtaaaactcagaacctcttttcaacaaatagtatcatagtttaaacctgtaaaaaatcacgtaagcaagaagatc-aaaaatttccagaattcagaga 18506799  T
Q  331 gaaaaccgtaaccgtaagca-cgaaatctagatccataaggatc 373  Q
    ||||||  ||||||||| || | ||| |||||||| ||||||||    
T  18506798 gaaaactataaccgtaaacatcaaaacctagatccgtaaggatc 18506755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 27288131 - 27288076
Alignment:
Q  240 aaaactcagaatcttttctcaaaaaataatcatagtttaaacctgcaaaatcacgc 295  Q
    ||||||||||| || ||  ||||| | |||||||||||||||||||||||||||||    
T  27288131 aaaactcagaacctctttacaaaataaaatcatagtttaaacctgcaaaatcacgc 27288076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 37749059 - 37749114
Alignment:
Q  240 aaaactcagaatcttttctcaaaaaataatcatagtttaaacctgcaaaatcacgc 295  Q
    ||||||||||| || ||  ||||| | |||||||||||||||||||||||||||||    
T  37749059 aaaactcagaacctctttacaaaataaaatcatagtttaaacctgcaaaatcacgc 37749114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 37764305 - 37764360
Alignment:
Q  240 aaaactcagaatcttttctcaaaaaataatcatagtttaaacctgcaaaatcacgc 295  Q
    ||||||||||| || ||  ||||| | |||||||||||||||||||||||||||||    
T  37764305 aaaactcagaacctctttacaaaataaaatcatagtttaaacctgcaaaatcacgc 37764360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 2505059 - 2505120
Alignment:
Q  313 atttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||||||||||||||||    || |||||||||||| ||| ||| ||||||||||||||||||    
T  2505059 atttccagaattcaaaagcgaagccgtaaccgtaaacacaaaacctagatccataaggatct 2505120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 2520379 - 2520440
Alignment:
Q  313 atttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||||||||||||||||    || |||||||||||| ||| ||| ||||||||||||||||||    
T  2520379 atttccagaattcaaaagcgaagccgtaaccgtaaacacaaaacctagatccataaggatct 2520440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 37677553 - 37677492
Alignment:
Q  313 atttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||||||||||||||||    || |||||||||||| ||| ||| ||||||||||||||||||    
T  37677553 atttccagaattcaaaagcgaagccgtaaccgtaaacacaaaacctagatccataaggatct 37677492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 1e-54; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 171 - 374
Target Start/End: Original strand, 10387890 - 10388096
Alignment:
Q  171 tcagaaaacaacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata--a 268  Q
    |||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||  |    
T  10387890 tcagaaaaca-cagaatcaagtttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatctcttctcagaaaataata 10387988  T
Q  269 tcatagtttaaacctg--caaaatcacgcgag-aaacagatc-taaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatcc 364  Q
    ||||||||||| ||||   |||||||||| || || || |||  |||||||||||||||||||  |||||||||||||||||||||||||| ||||||||    
T  10387989 tcatagtttaaccctgtaaaaaatcacgcaagcaagcatatcaaaaaaatttccagaattcaa--agaaaaccgtaaccgtaagcacgaaacctagatcc 10388086  T
Q  365 ataaggatct 374  Q
    ||||||||||    
T  10388087 ataaggatct 10388096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 171 - 374
Target Start/End: Original strand, 10405264 - 10405469
Alignment:
Q  171 tcagaaaacaacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata--a 268  Q
    |||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||  |    
T  10405264 tcagaaaaca-cagaatcaagtttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatctcttctcagaaaataata 10405362  T
Q  269 tcatagtttaaacctg--caaaatcacgcgag-aaacagatc-taaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatcc 364  Q
    ||||||||| ||||||   |||||||||| || || || |||  |||||||||||||||||||  |||||||||||||||||||||||||| ||||||||    
T  10405363 tcatagttt-aacctgtaaaaaatcacgcaagcaagcatatcaaaaaaatttccagaattcaa--agaaaaccgtaaccgtaagcacgaaacctagatcc 10405459  T
Q  365 ataaggatct 374  Q
    ||||||||||    
T  10405460 ataaggatct 10405469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 172 - 374
Target Start/End: Original strand, 26427063 - 26427269
Alignment:
Q  172 cagaaaacaacagaatcaagttctc-ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatct-tttctcaaaaaata-- 267  Q
    ||||||||| |||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||      
T  26427063 cagaaaaca-cagaatcaagttttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcaaaatctctttctcagaaaataat 26427161  T
Q  268 atcatagtttaaacctg--caaaatcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatcc 364  Q
    |||||||||||| ||||   |||||||||| || || || ||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||||||    
T  26427162 atcatagtttaaccctgtaaaaaatcacgcaagcaagcatatcaaaaaatttccagaattcaa--agaaaaccgtaaccgtaagcacgaaacctagatcc 26427259  T
Q  365 ataaggatct 374  Q
    ||||||||||    
T  26427260 ataaggatct 26427269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 28014996 - 28015079
Alignment:
Q  12 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28014996 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 28015079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 28030314 - 28030397
Alignment:
Q  12 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28030314 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 28030397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 187 - 374
Target Start/End: Complemental strand, 28107061 - 28106872
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa--aataatcatagtttaaacctg 284  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||  | ||||||||     
T  28107061 tcaagtttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaagtaat-atcactg-ttaaaccta 28106964  T
Q  285 caaa---atcacgcgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
     |||   ||||||| || ||||||||  ||||||||||||| |||||||  ||||||||||||||| ||| ||| ||||||||||||||||||    
T  28106963 aaaaaatatcacgcaagcaacagatc-caaaatttccagaactcaaagacgaaaccgtaaccgtaaacacaaaacctagatccataaggatct 28106872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 187 - 374
Target Start/End: Complemental strand, 28122297 - 28122108
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa--aataatcatagtttaaacctg 284  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||  | ||||||||     
T  28122297 tcaagtttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaagtaat-atcactg-ttaaaccta 28122200  T
Q  285 caaa---atcacgcgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
     |||   ||||||| || ||||||||  ||||||||||||| |||||||  ||||||||||||||| ||| ||| ||||||||||||||||||    
T  28122199 aaaaaatatcacgcaagcaacagatc-caaaatttccagaactcaaagacgaaaccgtaaccgtaaacacaaaacctagatccataaggatct 28122108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 187 - 374
Target Start/End: Original strand, 5007606 - 5007798
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa-aataatcatagtttaaacctgc 285  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||  | ||||||||      
T  5007606 tcaagttttcccaaagttttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaagtattatcactg-ttaaacctat 5007704  T
Q  286 aaa------atcacgcgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||      ||||||| || || |||||  ||||||||||||| |||||||  ||||||||||||||| ||||||| ||||||||||||||||||    
T  5007705 aaaaaaaatatcacgcaagcaatagatc-caaaatttccagaactcaaagacgaaaccgtaaccgtaaacacgaaacctagatccataaggatct 5007798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 187 - 374
Target Start/End: Original strand, 5022865 - 5023057
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa-aataatcatagtttaaacctgc 285  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||  | ||||||||      
T  5022865 tcaagttttcccaaagttttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaagtattatcactg-ttaaacctat 5022963  T
Q  286 aaa------atcacgcgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||      ||||||| || || |||||  ||||||||||||| |||||||  ||||||||||||||| ||||||| ||||||||||||||||||    
T  5022964 aaaaaaaatatcacgcaagcaatagatc-caaaatttccagaactcaaagacgaaaccgtaaccgtaaacacgaaacctagatccataaggatct 5023057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 180 - 374
Target Start/End: Original strand, 5709341 - 5709541
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaa---ataatcatagtt 276  Q
    |||||||||||  | | |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| || |||| ||    |||||||||||    
T  5709341 aacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccagaaccttaggtaaaactcataatctcttttcaagaagtgttaatcatagtt 5709440  T
Q  277 taaacctg----caaaatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataagg 370  Q
    |||||| |     |||||||||| ||  |||||||||  ||||||||||||||||||  |||||||||||||||||||||||||| |||||||| |||||    
T  5709441 taaaccggtaaaaaaaatcacgcaagcaaaacagatc-caaaatttccagaattcaa--agaaaaccgtaaccgtaagcacgaaacctagatccgtaagg 5709537  T
Q  371 atct 374  Q
    ||||    
T  5709538 atct 5709541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 180 - 374
Target Start/End: Original strand, 5720251 - 5720451
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaa---ataatcatagtt 276  Q
    |||||||||||  | | |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| || |||| ||    |||||||||||    
T  5720251 aacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccagaaccttaggtaaaactcataatctcttttcaagaagtgttaatcatagtt 5720350  T
Q  277 taaacctg----caaaatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataagg 370  Q
    |||||| |     |||||||||| ||  |||||||||  ||||||||||||||||||  |||||||||||||||||||||||||| |||||||| |||||    
T  5720351 taaaccggtaaaaaaaatcacgcaagcaaaacagatc-caaaatttccagaattcaa--agaaaaccgtaaccgtaagcacgaaacctagatccgtaagg 5720447  T
Q  371 atct 374  Q
    ||||    
T  5720448 atct 5720451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 180 - 374
Target Start/End: Original strand, 5731154 - 5731354
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaa---ataatcatagtt 276  Q
    |||||||||||  | | |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| || |||| ||    |||||||||||    
T  5731154 aacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccagaaccttaggtaaaactcataatctcttttcaagaagtgttaatcatagtt 5731253  T
Q  277 taaacctg----caaaatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataagg 370  Q
    |||||| |     |||||||||| ||  |||||||||  ||||||||||||||||||  |||||||||||||||||||||||||| |||||||| |||||    
T  5731254 taaaccggtaaaaaaaatcacgcaagcaaaacagatc-caaaatttccagaattcaa--agaaaaccgtaaccgtaagcacgaaacctagatccgtaagg 5731350  T
Q  371 atct 374  Q
    ||||    
T  5731351 atct 5731354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 180 - 374
Target Start/End: Complemental strand, 5761214 - 5761014
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaa---ataatcatagtt 276  Q
    |||||||||||  | | |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| || |||| ||    |||||||||||    
T  5761214 aacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccagaaccttaggtaaaactcataatctcttttcaagaagtgttaatcatagtt 5761115  T
Q  277 taaacctg----caaaatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataagg 370  Q
    |||||| |     |||||||||| ||  |||||||||  ||||||||||||||||||  |||||||||||||||||||||||||| |||||||| |||||    
T  5761114 taaaccggtaaaaaaaatcacgcaagcaaaacagatc-caaaatttccagaattcaa--agaaaaccgtaaccgtaagcacgaaacctagatccgtaagg 5761018  T
Q  371 atct 374  Q
    ||||    
T  5761017 atct 5761014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 187 - 374
Target Start/End: Complemental strand, 50140393 - 50140199
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa--aataatcatagtttaaacctg 284  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||  | |||||||||    
T  50140393 tcaagttttcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaagtaat-atcactg-ttaaacctg 50140296  T
Q  285 -----caaaatcacgcgag--aaacagatc--taaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
          | |||||||||||  || || |||   |||||||||||||||||||  |||||||||||||||||| ||||||| ||||||||||||||||||    
T  50140295 tagaaaacaatcacgcgagcaaagcacatcaaaaaaaatttccagaattcaa--agaaaaccgtaaccgtaaacacgaaacctagatccataaggatct 50140199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 187 - 263
Target Start/End: Complemental strand, 5600430 - 5600354
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa 263  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5600430 tcaagttttcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa 5600354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 187 - 263
Target Start/End: Complemental strand, 5615671 - 5615595
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa 263  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5615671 tcaagttttcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa 5615595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 236 - 374
Target Start/End: Original strand, 48459883 - 48460025
Alignment:
Q  236 aggtaaaactcagaatcttttctcaaaaaat--aatcatagtttaaacctgcaaaa-tcacgcgag-aaacagatctaaaaatttccagaattcaaagag 331  Q
    ||||||||||||||| || || |||| ||||  |||||||||||||||||| |||| |||||| || |||| |||||||||||||||||||||||||||     
T  48459883 aggtaaaactcagaacctcttttcaacaaatgaaatcatagtttaaacctgtaaaaatcacgcaagcaaacggatctaaaaatttccagaattcaaagat 48459982  T
Q  332 aaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||||||||||| ||| ||| ||||||||||||||||||    
T  48459983 aaaaccgtaaccgtaaacacaaaacctagatccataaggatct 48460025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 236 - 374
Target Start/End: Original strand, 48475642 - 48475784
Alignment:
Q  236 aggtaaaactcagaatcttttctcaaaaaat--aatcatagtttaaacctgcaaaa-tcacgcgag-aaacagatctaaaaatttccagaattcaaagag 331  Q
    ||||||||||||||| || || |||| ||||  |||||||||||||||||| |||| |||||| || |||| |||||||||||||||||||||||||||     
T  48475642 aggtaaaactcagaacctcttttcaacaaatgaaatcatagtttaaacctgtaaaaatcacgcaagcaaacggatctaaaaatttccagaattcaaagat 48475741  T
Q  332 aaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||||||||||| ||| ||| ||||||||||||||||||    
T  48475742 aaaaccgtaaccgtaaacacaaaacctagatccataaggatct 48475784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 187 - 260
Target Start/End: Original strand, 28348309 - 28348382
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctca 260  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28348309 tcaagttttcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctca 28348382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 187 - 374
Target Start/End: Original strand, 22491163 - 22491351
Alignment:
Q  187 tcaagttctcccaaagattt-cctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaat---aatcatagtttaaacc 282  Q
    ||||||| | |||||||||| ||||||||||| |||||||||||||| | ||||||||||||   || | ||||||||| |   ||||| |||| |||||    
T  22491163 tcaagtttttccaaagattttcctccattaaaagtttcaaccaaaacttcaggtaaaactcatt-tcctctctcaaaaagtgttaatcacagtt-aaacc 22491260  T
Q  283 tgcaaaatcacgcgagaaa-cagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    || ||||||||||||| || || ||| ||||||||||||||||||||||  ||| ||||||||||||||||||| ||||||||||||||||||    
T  22491261 tgtaaaatcacgcgagcaagcatatcaaaaaatttccagaattcaaaga--aaatcgtaaccgtaagcacgaaacctagatccataaggatct 22491351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 187 - 260
Target Start/End: Original strand, 28333207 - 28333280
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctca 260  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28333207 tcaagttttcccaaagattttctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctca 28333280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 208 - 374
Target Start/End: Original strand, 51776122 - 51776287
Alignment:
Q  208 ctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa--aataatcatagtttaaacctgcaaaatcacgcgag--aaaca 303  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||  ||| ||||  | ||||||||  |||||||||| ||  |||||    
T  51776122 ctccattaaaggtttcaaccaaaaccttaggtaaaactcataatctttt-tcaaaagcaat-atcactg-ttaaacct-aaaaatcacgcaagcaaaaca 51776217  T
Q  304 gatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||||  ||||||||||||||||||||  |||||||||||||||| ||| ||| ||||||||||||||||||    
T  51776218 gatc-caaaatttccagaattcaaagccaaaaccgtaaccgtaaacacaaaacctagatccataaggatct 51776287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 208 - 374
Target Start/End: Original strand, 51791208 - 51791373
Alignment:
Q  208 ctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa--aataatcatagtttaaacctgcaaaatcacgcgag--aaaca 303  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||  ||| ||||  | ||||||||  |||||||||| ||  |||||    
T  51791208 ctccattaaaggtttcaaccaaaaccttaggtaaaactcataatctttt-tcaaaagcaat-atcactg-ttaaacct-aaaaatcacgcaagcaaaaca 51791303  T
Q  304 gatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||||  ||||||||||||||||||||  |||||||||||||||| ||| ||| ||||||||||||||||||    
T  51791304 gatc-caaaatttccagaattcaaagccaaaaccgtaaccgtaaacacaaaacctagatccataaggatct 51791373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 221 - 373
Target Start/End: Complemental strand, 22119859 - 22119705
Alignment:
Q  221 ttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaa--ataatcatagtttaaacctgcaaaatcacgcgag-aaacagatctaaaaatttc 317  Q
    |||||||||||| | ||||||||||||||||   |  |||||||  |||||||  ||| ||||||| ||||||||||||  |||||||||||||||||||    
T  22119859 ttcaaccaaaacttaaggtaaaactcagaattcctcttcaaaaattataatcacggtt-aaacctgtaaaatcacgcgaacaaacagatctaaaaatttc 22119761  T
Q  318 cagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatc 373  Q
    ||||||||||||| |||| | ||||||||| ||| ||| |||||||||||||||||    
T  22119760 cagaattcaaagataaaatcataaccgtaaacacaaaacctagatccataaggatc 22119705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 204 - 374
Target Start/End: Original strand, 6226341 - 6226512
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaat---aatcatagtttaaacctgcaaaatcacgcgag-a 299  Q
    |||||||||||||| |||||||||||||| | ||||||||||||   || | ||||| ||| |   ||||| |||| ||||||| ||||||||||||| |    
T  6226341 tttcctccattaaaagtttcaaccaaaacttcaggtaaaactcatt-tcctctctcagaaagtgttaatcacagtt-aaacctgtaaaatcacgcgagca 6226438  T
Q  300 aacagatc-taaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    | || |||  |||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||    
T  6226439 agcatatcaaaaaaatttccagaattcaa--agaaaaccgtaaccgtaagcacgaaacctagatccataaggatct 6226512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 204 - 374
Target Start/End: Original strand, 18251930 - 18252109
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata---atcatagtttaaacctgcaaaa------tcacg 294  Q
    |||||||||||||| |||||||||||||| | ||||||||||||   |||| ||| | ||| ||   ||||  ||||||||||| ||||      |||||    
T  18251930 tttcctccattaaaagtttcaaccaaaacttcaggtaaaactcattttcttctcttagaaagtattaatcacggtttaaacctgtaaaaaaaaaatcacg 18252029  T
Q  295 cgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    | || ||||||||||||||||||||||||||||||| || || |||||||||| ||| ||| ||||||||||||||||||    
T  18252030 caagcaacagatctaaaaatttccagaattcaaagataagactgtaaccgtaaacacaaaacctagatccataaggatct 18252109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 268 - 374
Target Start/End: Complemental strand, 18283323 - 18283216
Alignment:
Q  268 atcatagtttaaacctgcaaaa-tcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatcca 365  Q
    ||||||||||||||||| |||| |||||| || |||||||||||||| ||||||||||||||||  ||| |||||||||||| ||| ||| |||||||||    
T  18283323 atcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaa-tttccagaattcaaaggtaaagccgtaaccgtaaacacaaaacctagatcca 18283225  T
Q  366 taaggatct 374  Q
    |||||||||    
T  18283224 taaggatct 18283216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 268 - 374
Target Start/End: Complemental strand, 18298624 - 18298517
Alignment:
Q  268 atcatagtttaaacctgcaaaa-tcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatcca 365  Q
    ||||||||||||||||| |||| |||||| || |||||||||||||| ||||||||||||||||  ||| |||||||||||| ||| ||| |||||||||    
T  18298624 atcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaa-tttccagaattcaaaggtaaagccgtaaccgtaaacacaaaacctagatcca 18298526  T
Q  366 taaggatct 374  Q
    |||||||||    
T  18298525 taaggatct 18298517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 268 - 374
Target Start/End: Complemental strand, 18313925 - 18313818
Alignment:
Q  268 atcatagtttaaacctgcaaaa-tcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatcca 365  Q
    ||||||||||||||||| |||| |||||| || |||||||||||||| ||||||||||||||||  ||| |||||||||||| ||| ||| |||||||||    
T  18313925 atcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaa-tttccagaattcaaaggtaaagccgtaaccgtaaacacaaaacctagatcca 18313827  T
Q  366 taaggatct 374  Q
    |||||||||    
T  18313826 taaggatct 18313818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 204 - 374
Target Start/End: Complemental strand, 26680857 - 26680682
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaat---aatcatagtttaaacctgcaaaa--tcacgcgag 298  Q
    |||||||||||||| |||||| ||||||| | ||||||||||||   || | ||||||||| |   |||||||||||||||||| ||||  |||||| ||    
T  26680857 tttcctccattaaaagtttcagccaaaacttcaggtaaaactcatt-tcctctctcaaaaagtgttaatcatagtttaaacctgtaaaaaatcacgcaag 26680759  T
Q  299 aaa--cagatctaaaaa-tttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
     ||  || ||| ||||| |||||||| ||||||||  ||||||||||||||||||||||| ||||||||||||||||||    
T  26680758 caaagcatatcaaaaaaatttccagagttcaaaga--aaaccgtaaccgtaagcacgaaacctagatccataaggatct 26680682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 204 - 374
Target Start/End: Original strand, 24322075 - 24322253
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata---atcatagtttaaacctgcaaaa------tcacg 294  Q
    |||||||||||||| |||||||||||||| | ||||||||||||   |||| ||| | ||| ||   ||||  ||||||||||| ||||      |||||    
T  24322075 tttcctccattaaaagtttcaaccaaaacttcaggtaaaactcattttcttctcttagaaagtattaatcacggtttaaacctgtaaaaaaggaatcacg 24322174  T
Q  295 cgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    | || | |||||||||||||| |||||||||||||| || || |||||||||| ||||||| ||||||||||||||||||    
T  24322175 caagcagcagatctaaaaatt-ccagaattcaaagataagactgtaaccgtaaacacgaaacctagatccataaggatct 24322253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 204 - 374
Target Start/End: Original strand, 24337427 - 24337605
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata---atcatagtttaaacctgcaaaa------tcacg 294  Q
    |||||||||||||| |||||||||||||| | ||||||||||||   |||| ||| | ||| ||   ||||  ||||||||||| ||||      |||||    
T  24337427 tttcctccattaaaagtttcaaccaaaacttcaggtaaaactcattttcttctcttagaaagtattaatcacggtttaaacctgtaaaaaaggaatcacg 24337526  T
Q  295 cgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    | || | |||||||||||||| |||||||||||||| || || |||||||||| ||||||| ||||||||||||||||||    
T  24337527 caagcagcagatctaaaaatt-ccagaattcaaagataagactgtaaccgtaaacacgaaacctagatccataaggatct 24337605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 289
Target Start/End: Original strand, 8205720 - 8205814
Alignment:
Q  197 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaat--aatcatagtttaaacctgcaaaa 289  Q
    |||||||||||||||||||||||||||| ||||||||| | |||||||||||| | | |||| | |||||  |||||||||||||||||| ||||    
T  8205720 ccaaagatttcctccattaaaggtttcagccaaaacctcaagtaaaactcagattttcttcttagaaaatagaatcatagtttaaacctgtaaaa 8205814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 289
Target Start/End: Original strand, 8220889 - 8220983
Alignment:
Q  197 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaat--aatcatagtttaaacctgcaaaa 289  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||| | | |||| | |||||  ||| |||||||||||||| ||||    
T  8220889 ccaaagatttcctccattaaaggtttcagccaaaacctcaggtaaaactcagattttcttcttagaaaatagaattatagtttaaacctgtaaaa 8220983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 276 - 374
Target Start/End: Original strand, 43716695 - 43716790
Alignment:
Q  276 ttaaacctgcaaaatcacgcgagaaa-cagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||||||||| ||||||||||||| || || |||  |||||||||||||||||||||  ||||| ||||||||| ||||||| ||||||||||||||||||    
T  43716695 ttaaacctgtaaaatcacgcgagcaagcatatc--aaaatttccagaattcaaaga--aaaccataaccgtaaacacgaaacctagatccataaggatct 43716790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 17975709 - 17975657
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatctttt 256  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  17975709 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcatactctttt 17975657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 17991257 - 17991205
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatctttt 256  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  17991257 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcatactctttt 17991205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 18219137 - 18219189
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatctttt 256  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  18219137 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcatactctttt 18219189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 18234445 - 18234497
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatctttt 256  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  18234445 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcatactctttt 18234497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 374
Target Start/End: Complemental strand, 47197439 - 47197298
Alignment:
Q  236 aggtaaaactcagaatcttttctc-aaaaaata--atcatagtttaaacctgc-aaaatcacgcg-agaaacagatctaaaaatttccagaattcaaaga 330  Q
    |||||||||||||||| | |  || ||||||||  |||||||||||||||||| ||||||||| | | |||||||||| ||| ||||||||| ||| | |    
T  47197439 aggtaaaactcagaatttctcttcaaaaaaataatatcatagtttaaacctgcaaaaatcacgtgaataaacagatct-aaattttccagaa-tcacaaa 47197342  T
Q  331 gaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||||||| ||||||||| ||| ||||||||||||||||||||||    
T  47197341 gaaaaccataaccgtaaacacaaaatctagatccataaggatct 47197298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 323
Target Start/End: Complemental strand, 22769097 - 22769008
Alignment:
Q  236 aggtaaaactcagaatcttttctcaaaaa--ataatcatagtttaaacctgcaaaatcacgcgagaaacagatctaaaaatttccagaat 323  Q
    ||||||||||||||| || || |||||||  | ||||||||||||||||||||||||||||| || |||| | |||||| ||||||||||    
T  22769097 aggtaaaactcagaacctcttttcaaaaataaaaatcatagtttaaacctgcaaaatcacgcaagcaacaaacctaaaattttccagaat 22769008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 204 - 374
Target Start/End: Complemental strand, 16401467 - 16401289
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata---atcatagtttaaacctgca------aaatcacg 294  Q
    |||||||||||||| |||||||||||||| | ||||||||||||   |||| ||| | ||| ||   ||||  ||||||||||| |      ||||||||    
T  16401467 tttcctccattaaaagtttcaaccaaaacttcaggtaaaactcattttcttctcttagaaagtattaatcacggtttaaacctgtagaagaaaaatcacg 16401368  T
Q  295 cgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    | || | ||||||||||| ||||||||||||||||| ||    |||||||||| ||| ||| ||||||||||||||||||    
T  16401367 caagcagcagatctaaaa-tttccagaattcaaagataaggttgtaaccgtaaacacaaaacctagatccataaggatct 16401289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 204 - 330
Target Start/End: Original strand, 18217727 - 18217862
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata---atcatagtttaaacctgcaaaa------tcacg 294  Q
    |||||||||||||| |||||||||||||| | ||||||||||||   |||| ||| | ||| ||   ||||  ||||||||||| ||||      |||||    
T  18217727 tttcctccattaaaagtttcaaccaaaacttcaggtaaaactcattttcttctcttagaaagtattaatcacggtttaaacctgtaaaaaaaaaatcacg 18217826  T
Q  295 cgagaaacagatctaaaaatttccagaattcaaaga 330  Q
    | || |||||||||||||||||||||||||||||||    
T  18217827 caagcaacagatctaaaaatttccagaattcaaaga 18217862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 311
Target Start/End: Original strand, 7067358 - 7067436
Alignment:
Q  236 aggtaaaactcagaatcttttctcaaaaaataat--catagtttaaacctgcaaaatcacgcg-agaaacagatctaaa 311  Q
    |||||||||||| ||| | |  ||||||||||||  ||||||||||||||||||||||||| | | |||||||||||||    
T  7067358 aggtaaaactcaaaatttctcttcaaaaaataatatcatagtttaaacctgcaaaatcacgtgaataaacagatctaaa 7067436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 311
Target Start/End: Original strand, 7082310 - 7082388
Alignment:
Q  236 aggtaaaactcagaatcttttctcaaaaaataat--catagtttaaacctgcaaaatcacgcg-agaaacagatctaaa 311  Q
    |||||||||||| ||| | |  ||||||||||||  ||||||||||||||||||||||||| | | |||||||||||||    
T  7082310 aggtaaaactcaaaatttctcttcaaaaaataatatcatagtttaaacctgcaaaatcacgtgaataaacagatctaaa 7082388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 37003436 - 37003381
Alignment:
Q  240 aaaactcagaatcttttctcaaaaaataatcatagtttaaacctgcaaaatcacgc 295  Q
    ||||||||||| || ||  ||||| | |||||||||||||||||||||||||||||    
T  37003436 aaaactcagaacctctttacaaaataaaatcatagtttaaacctgcaaaatcacgc 37003381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 6533664 - 6533603
Alignment:
Q  313 atttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||||||||||||  ||  |||||||||||| ||  ||| ||||||||||||||||||    
T  6533664 atttccagaattcaaagccaaggccgtaaccgtaaacataaaacctagatccataaggatct 6533603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 6547495 - 6547434
Alignment:
Q  313 atttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||||||||||||  ||  |||||||||||| ||  ||| ||||||||||||||||||    
T  6547495 atttccagaattcaaagccaaggccgtaaccgtaaacataaaacctagatccataaggatct 6547434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 2e-53; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 180 - 374
Target Start/End: Complemental strand, 16963225 - 16963031
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa--aataatcatagttt 277  Q
    |||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||  |||| |||  |||     
T  16963225 aacagaatcaagatttcc-aaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatctcttttcaaaagtaata-tcacggtt- 16963129  T
Q  278 aaacctgcaaaatcacgcgagaaacagatctaaaaatttccag-aattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||| ||| ||| ||||||||||||||||||    
T  16963128 aaacctgtaaaatcacgcgagaaacagatctaaaaatttccagaaattcaaagataaaatcgtaaccgtaaacacaaaacctagatccataaggatct 16963031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 180 - 374
Target Start/End: Complemental strand, 12707597 - 12707400
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaa---ataatcatagtt 276  Q
    |||||||||||  | | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||    |||||||||||    
T  12707597 aacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataatctcttttcaaaaagtgttaatcatagtt 12707498  T
Q  277 taaacctgcaa--aatcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatc 373  Q
    ||| |||| ||  |||||||  || || || ||| |||||||||||||||||||  |||||||||||||||||| ||||||| |||||||||||||||||    
T  12707497 taagcctgtaaacaatcacgtaagcaagcatatc-aaaaatttccagaattcaa--agaaaaccgtaaccgtaaacacgaaacctagatccataaggatc 12707401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 180 - 374
Target Start/End: Complemental strand, 12722997 - 12722800
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaa---ataatcatagtt 276  Q
    |||||||||||  | | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||    |||||||||||    
T  12722997 aacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataatctcttttcaaaaagtgttaatcatagtt 12722898  T
Q  277 taaacctgcaa--aatcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatc 373  Q
    ||| |||| ||  |||||||  || || || ||| |||||||||||||||||||  |||||||||||||||||| ||||||| |||||||||||||||||    
T  12722897 taagcctgtaaacaatcacgtaagcaagcatatc-aaaaatttccagaattcaa--agaaaaccgtaaccgtaaacacgaaacctagatccataaggatc 12722801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 16861255 - 16861172
Alignment:
Q  12 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16861255 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 16861172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 180 - 374
Target Start/End: Original strand, 27797761 - 27797960
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaa---ataatcatagtt 276  Q
    |||||||||||  | | ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| || |||| ||    |||||||||||    
T  27797761 aacagaatcaaagttttccaaagatttcctccgttaaaggtttcaaccaaaaccttaggtaaaactcataatctcttttcaagaagtgttaatcatagtt 27797860  T
Q  277 taaacctg---caaaatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataagga 371  Q
    |||||| |    |||||||||| ||  |||||||||  ||||||||||||||||||  |||||||||||||||||||||||||| |||||||| ||||||    
T  27797861 taaaccggtaaaaaaatcacgcaagcaaaacagatc-caaaatttccagaattcaa--agaaaaccgtaaccgtaagcacgaaacctagatccgtaagga 27797957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 180 - 374
Target Start/End: Original strand, 27812850 - 27813049
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaa---ataatcatagtt 276  Q
    |||||||||||  | | ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| || |||| ||    |||||||||||    
T  27812850 aacagaatcaaagttttccaaagatttcctccgttaaaggtttcaaccaaaaccttaggtaaaactcataatctcttttcaagaagtgttaatcatagtt 27812949  T
Q  277 taaacctg---caaaatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataagga 371  Q
    |||||| |    |||||||||| ||  |||||||||  ||||||||||||||||||  |||||||||||||||||||||||||| |||||||| ||||||    
T  27812950 taaaccggtaaaaaaatcacgcaagcaaaacagatc-caaaatttccagaattcaa--agaaaaccgtaaccgtaagcacgaaacctagatccgtaagga 27813046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 187 - 374
Target Start/End: Complemental strand, 22919210 - 22919016
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa--aataatcatagtttaaacctg 284  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||  | |||||||||    
T  22919210 tcaagttttcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaagtaat-atcactg-ttaaacctg 22919113  T
Q  285 -----caaaatcacgcgag--aaacagatctaaa--aatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
          | |||||||||||  || || ||| |||  ||||||||||||||||  |||||||||||||||||| ||||||| ||||||||||||||||||    
T  22919112 tagaaaacaatcacgcgagcaaagcacatcaaaaagaatttccagaattcaa--agaaaaccgtaaccgtaaacacgaaacctagatccataaggatct 22919016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 187 - 374
Target Start/End: Complemental strand, 22932320 - 22932126
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa--aataatcatagtttaaacctg 284  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||  | |||||||||    
T  22932320 tcaagttttcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaagtaat-atcactg-ttaaacctg 22932223  T
Q  285 -----caaaatcacgcgag--aaacagatctaaa--aatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
          | |||||||||||  || || ||| |||  ||||||||||||||||  |||||||||||||||||| ||||||| ||||||||||||||||||    
T  22932222 tagaaaacaatcacgcgagcaaagcacatcaaaaagaatttccagaattcaa--agaaaaccgtaaccgtaaacacgaaacctagatccataaggatct 22932126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 187 - 374
Target Start/End: Complemental strand, 19407545 - 19407354
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa-aataatcatagtttaaacctgc 285  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   | ||||  | ||||||||      
T  19407545 tcaagttttcccaaagttttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaagtgttatcactg-ttaaacctat 19407447  T
Q  286 aaa-----atcacgcgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||     ||||||| || || |||||  ||||||||||||| |||||||  ||||||||||||||| ||||||| ||||||||||||||||||    
T  19407446 aaaaaaatatcacgcaagcaatagatc-caaaatttccagaactcaaagacgaaaccgtaaccgtaaacacgaaacctagatccataaggatct 19407354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 187 - 374
Target Start/End: Complemental strand, 19422545 - 19422354
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa-aataatcatagtttaaacctgc 285  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   | ||||  | ||||||||      
T  19422545 tcaagttttcccaaagttttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaagtgttatcactg-ttaaacctat 19422447  T
Q  286 aaa-----atcacgcgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||     ||||||| || || |||||  ||||||||||||| |||||||  ||||||||||||||| ||||||| ||||||||||||||||||    
T  19422446 aaaaaaatatcacgcaagcaatagatc-caaaatttccagaactcaaagacgaaaccgtaaccgtaaacacgaaacctagatccataaggatct 19422354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 180 - 374
Target Start/End: Complemental strand, 37942899 - 37942700
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata--atcatagttt 277  Q
    |||||||||||| | ||| | ||||||||||||||||||||||||||||||||||||||||||||||| || || |||||| ||||||  ||||||||||    
T  37942899 aacagaatcaagatttcc-agagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataacctcttctcagaaaataatatcatagttt 37942801  T
Q  278 aaacctg-----caaaatcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataagga 371  Q
    |||||||      ||||||||||||| || || ||  |||||||||||||||||||  ||||| ||||||| |||| ||| ||| |||||||||||||||    
T  37942800 aaacctgtaaaaaaaaatcacgcgagcaagcatatagaaaaatttccagaattcaa--agaaagccgtaactgtaaacacaaaacctagatccataagga 37942703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 2730165 - 2730248
Alignment:
Q  12 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 95  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2730165 cacagaatcaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaaacagt 2730248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 180 - 374
Target Start/End: Original strand, 16159755 - 16159955
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaa---ataatcatagtt 276  Q
    |||||||||||  | | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||| ||    |||||||||||    
T  16159755 aacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataatctcttttcaagaagtgttaatcatagtt 16159854  T
Q  277 taaacctg----caaaatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataagg 370  Q
    |||||| |     |||||||||| ||  || ||||||  | ||||||||||||||||  |||||||||||||||||||||||||| |||||||| |||||    
T  16159855 taaaccggtaaaaaaaatcacgcaagcaaagcagatc-cagaatttccagaattcaa--agaaaaccgtaaccgtaagcacgaaacctagatccgtaagg 16159951  T
Q  371 atct 374  Q
    ||||    
T  16159952 atct 16159955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 180 - 374
Target Start/End: Original strand, 16170656 - 16170856
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaa---ataatcatagtt 276  Q
    |||||||||||  | | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||| ||    |||||||||||    
T  16170656 aacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataatctcttttcaagaagtgttaatcatagtt 16170755  T
Q  277 taaacctg----caaaatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataagg 370  Q
    |||||| |     |||||||||| ||  || ||||||  | ||||||||||||||||  |||||||||||||||||||||||||| |||||||| |||||    
T  16170756 taaaccggtaaaaaaaatcacgcaagcaaagcagatc-cagaatttccagaattcaa--agaaaaccgtaaccgtaagcacgaaacctagatccgtaagg 16170852  T
Q  371 atct 374  Q
    ||||    
T  16170853 atct 16170856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 180 - 374
Target Start/End: Original strand, 34273301 - 34273492
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaataatcatagtttaa 279  Q
    |||||||||||||| ||| | |||||| ||| || ||| |||||||||||||| | |||||||||||||||||| |  |||||| |  ||||||||||||    
T  34273301 aacagaatcaagttttcc-agagattttctctatcaaaagtttcaaccaaaac-tcaggtaaaactcagaatctctcttcaaaataatatcatagtttaa 34273398  T
Q  280 acctgcaaaatcacgcg-agaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||||||||||||||| | | ||||| |||| ||| ||||||||| ||| | |||||||| ||||||||| ||| ||| ||||||||||||||||||    
T  34273399 acctgcaaaatcacgtgaataaacaaatct-aaattttccagaa-tcacaaagaaaaccataaccgtaaacacaaaacctagatccataaggatct 34273492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 180 - 373
Target Start/End: Complemental strand, 39042894 - 39042698
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata--atcatagttt 277  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||| | | |||| | ||||||  ||||||||||    
T  39042894 aacagaatcaagttttcc-aaagatttcctccattaaaggtttcaaccaaaacctcaggtaaaactcagattttcttcttagaaaatagtatcatagttt 39042796  T
Q  278 aaacctg-caaaatcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagca-cgaaatctagatccataaggatc 373  Q
    |||||||  |||||||||  || ||  ||||| |||||||||||||| |||||| |||| |  ||||||||| || | ||| |||||||| ||||||||    
T  39042795 aaacctgtaaaaatcacgtaagcaagaagatc-aaaaatttccagaactcaaagtgaaagctataaccgtaaacatcaaaacctagatccgtaaggatc 39042698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 180 - 373
Target Start/End: Complemental strand, 39058228 - 39058032
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata--atcatagttt 277  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||| | | |||| | ||||||  ||||||||||    
T  39058228 aacagaatcaagttttcc-aaagatttcctccattaaaggtttcaaccaaaacctcaggtaaaactcagattttcttcttagaaaatagtatcatagttt 39058130  T
Q  278 aaacctg-caaaatcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagca-cgaaatctagatccataaggatc 373  Q
    |||||||  |||||||||  || ||  ||||| |||||||||||||| |||||| |||| |  ||||||||| || | ||| |||||||| ||||||||    
T  39058129 aaacctgtaaaaatcacgtaagcaagaagatc-aaaaatttccagaactcaaagtgaaagctataaccgtaaacatcaaaacctagatccgtaaggatc 39058032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 180 - 374
Target Start/End: Complemental strand, 34802054 - 34801855
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaa---ataatcatagtt 276  Q
    |||||||||||  | | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||    |||||||||||    
T  34802054 aacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataatctcttttcaaaaagtgttaatcatagtt 34801955  T
Q  277 taaacctgcaa--aatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggat 372  Q
    |||||| | ||  |||||||| ||  || || |||| | | ||||||||| ||| | ||||| || ||||||||| ||| ||| ||||||||||||||||    
T  34801954 taaaccggtaaacaatcacgcaagcaaagcatatct-agattttccagaa-tcacaaagaaagccataaccgtaaacacaaaacctagatccataaggat 34801857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 236 - 374
Target Start/End: Complemental strand, 31473346 - 31473205
Alignment:
Q  236 aggtaaaactcagaatcttttctcaaaaaataa--tcatagtttaaacctgcaaaa-tcacgcgagaaacagatctaaaaatttccagaattcaaagaga 332  Q
    ||||||||||||||| || || |||| ||||||  |||||||||||||||| |||| |||||| || |||||||| |||| ||||||||| ||||||| |    
T  31473346 aggtaaaactcagaacctcttttcaacaaataaaatcatagtttaaacctgtaaaaatcacgcaagcaacagatccaaaa-tttccagaactcaaagaca 31473248  T
Q  333 aaa-ccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||| |||||||||||| ||| ||| ||||||||||||||||||    
T  31473247 aaaaccgtaaccgtaaacacaaaacctagatccataaggatct 31473205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 34300347 - 34300499
Alignment:
Q  220 tttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaataatcatagtttaaacctgcaaaatcacgcg-agaaacagatctaaaaatttcc 318  Q
    ||||||||||||| | |||||||||||||||||| |  |||||| |  ||||||||||||||||||||||||||| | | ||||| |||| ||| |||||    
T  34300347 tttcaaccaaaac-tcaggtaaaactcagaatctctcttcaaaataatatcatagtttaaacctgcaaaatcacgtgaataaacaaatct-aaattttcc 34300444  T
Q  319 agaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||| ||| | |||||||| ||||||||| ||| ||| ||||||||||||||||||    
T  34300445 agaa-tcacaaagaaaaccataaccgtaaacacaaaacctagatccataaggatct 34300499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 373
Target Start/End: Original strand, 5799664 - 5799843
Alignment:
Q  200 aagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaa---ataatcatagtttaaacctg---caaaatcac 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| || || ||||    ||||||| ||||||||| |    ||||||||    
T  5799664 aagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataatctcttttccaaaagtgttaatcatggtttaaaccggtaaaaaaatcac 5799763  T
Q  294 gcgagaaaca-gatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagca-cgaaatctagatccataaggatc 373  Q
    |  || || | ||||  |||||||||||||||||||||||||||  ||||||||| || | ||| |||||||| ||||||||    
T  5799764 gtaagcaagaggatc--aaaatttccagaattcaaagagaaaactataaccgtaaacatcaaaacctagatccgtaaggatc 5799843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 236 - 374
Target Start/End: Complemental strand, 34184115 - 34183974
Alignment:
Q  236 aggtaaaactcagaatcttttctcaaaaaataa--tcatagtttaaacctgcaaaa-tcacgcgagaaacagatctaaaaatttccagaattcaaagaga 332  Q
    ||||||||||||||| || || |||| ||||||  |||||||||||||||| |||| |||||| || |||||||| |||| ||||||||| ||||||| |    
T  34184115 aggtaaaactcagaacctcttttcaacaaataaaatcatagtttaaacctgtaaaaatcacgcaagcaacagatccaaaa-tttccagaactcaaagaca 34184017  T
Q  333 aaa-ccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||| ||| |||||||| ||| ||| ||||||||||||||||||    
T  34184016 aaaaccgcaaccgtaaacacaaaacctagatccataaggatct 34183974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 208 - 261
Target Start/End: Complemental strand, 13927627 - 13927574
Alignment:
Q  208 ctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaa 261  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  13927627 ctccattgaaggtttcaaccaaaaccttaggtaaaactcagaatctcttctcaa 13927574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 208 - 261
Target Start/End: Complemental strand, 13942823 - 13942770
Alignment:
Q  208 ctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaa 261  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  13942823 ctccattgaaggtttcaaccaaaaccttaggtaaaactcagaatctcttctcaa 13942770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 16820349 - 16820297
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatctttt 256  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  16820349 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcatactctttt 16820297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 16875571 - 16875519
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatctttt 256  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  16875571 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcatactctttt 16875519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 32043790 - 32043842
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatctttt 256  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  32043790 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcatactctttt 32043842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 32058986 - 32059038
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatctttt 256  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  32058986 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcatactctttt 32059038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 373
Target Start/End: Complemental strand, 15707384 - 15707210
Alignment:
Q  197 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaataat--catagtttaaacctgcaaaatcacg 294  Q
    |||||||||| ||| || ||| |||||||||||||| | |||||||||||||| | || |||  |||||||||  |||||||||||||||||||||||||    
T  15707384 ccaaagattttctctatcaaaagtttcaaccaaaac-tcaggtaaaactcagagt-ttctcttcaaaaataatatcatagtttaaacctgcaaaatcacg 15707287  T
Q  295 cg-agaaacagatctaaaaatttccagaat-tcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatc 373  Q
     | | |||||     |||| ||||||||||  ||||||  ||||| ||||||||| ||| ||| |||||||||||||||||    
T  15707286 tgaataaaca----aaaaattttccagaatcacaaagatgaaaccataaccgtaaacacaaaacctagatccataaggatc 15707210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 10985457 - 10985518
Alignment:
Q  313 atttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||||||||||||  ||| |||||||||||| ||| ||| ||||||||||||||||||    
T  10985457 atttccagaattcaaagccaaagccgtaaccgtaaacacaaaacctagatccataaggatct 10985518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 330
Target Start/End: Original strand, 37369087 - 37369232
Alignment:
Q  187 tcaagttctcccaaagattt-cctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaa---ataatcatagtttaaacc 282  Q
    ||||||| | |||||||||| ||||||||||| |||||||||||||| | ||||||||||||   || | |||||||||    |||||| || | |||||    
T  37369087 tcaagtttttccaaagattttcctccattaaaagtttcaaccaaaacttcaggtaaaactca-tttcctctctcaaaaagtgttaatcacag-tcaaacc 37369184  T
Q  283 tgcaaaatcacgcgag-aaacagatctaaaaatttccagaattcaaaga 330  Q
    || ||||||||||||| || || ||| ||||||||||||||||||||||    
T  37369185 tgtaaaatcacgcgagcaagcatatc-aaaaatttccagaattcaaaga 37369232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 330
Target Start/End: Original strand, 37386921 - 37387066
Alignment:
Q  187 tcaagttctcccaaagattt-cctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaa---ataatcatagtttaaacc 282  Q
    ||||||| | |||||||||| ||||||||||| |||||||||||||| | ||||||||||||   || | |||||||||    |||||| || | |||||    
T  37386921 tcaagtttttccaaagattttcctccattaaaagtttcaaccaaaacttcaggtaaaactca-tttcctctctcaaaaagtgttaatcacag-tcaaacc 37387018  T
Q  283 tgcaaaatcacgcgag-aaacagatctaaaaatttccagaattcaaaga 330  Q
    || ||||||||||||| || || ||| ||||||||||||||||||||||    
T  37387019 tgtaaaatcacgcgagcaagcatatc-aaaaatttccagaattcaaaga 37387066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 347
Target Start/End: Original strand, 27114830 - 27114907
Alignment:
Q  268 atcatagtttaaacctgcaaaatcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaa 347  Q
    ||||||||||||||||| |||||||||| || ||| |||||| ||||||||||||||  | |||||||||| |||||||||    
T  27114830 atcatagtttaaacctgtaaaatcacgcaagcaaatagatct-aaaatttccagaat--acagagaaaaccataaccgtaa 27114907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 347
Target Start/End: Original strand, 27125795 - 27125872
Alignment:
Q  268 atcatagtttaaacctgcaaaatcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaa 347  Q
    ||||||||||||||||| |||||||||| || ||| |||||| ||||||||||||||  | |||||||||| |||||||||    
T  27125795 atcatagtttaaacctgtaaaatcacgcaagcaaatagatct-aaaatttccagaat--acagagaaaaccataaccgtaa 27125872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 247
Target Start/End: Complemental strand, 251529 - 251486
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactca 247  Q
    |||||||||||||| |||||||||||||| | ||||||||||||    
T  251529 tttcctccattaaaagtttcaaccaaaacttcaggtaaaactca 251486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 247
Target Start/End: Complemental strand, 267059 - 267016
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactca 247  Q
    |||||||||||||| |||||||||||||| | ||||||||||||    
T  267059 tttcctccattaaaagtttcaaccaaaacttcaggtaaaactca 267016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 374
Target Start/End: Original strand, 34281044 - 34281130
Alignment:
Q  286 aaaatcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||||| || |||| ||||||||| |||||||||| ||  || ||| |||||||||||| ||| ||| ||||||||||||||||||    
T  34281044 aaaatcacgcaagcaaacggatctaaaa-tttccagaataca--gataaagccgtaaccgtaaacacaaaacctagatccataaggatct 34281130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 2e-40; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 180 - 374
Target Start/End: Complemental strand, 19510289 - 19510091
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa--aataatcatagttt 277  Q
    |||||||||||  | | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||    ||||||||||||    
T  19510289 aacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataatctcttttcaaaagtgttaatcatagttt 19510190  T
Q  278 aaacctgcaa--aatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatc 373  Q
    ||||||| ||  |||||||| ||  || || ||| | |||||||||||||||||  |||||||||||||||||| ||| ||| |||||||||||||||||    
T  19510189 aaacctgtaaacaatcacgcaagcaaagcatatcaagaaatttccagaattcaa--agaaaaccgtaaccgtaaacacaaaacctagatccataaggatc 19510092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 15904215 - 15904132
Alignment:
Q  12 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15904215 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 15904132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 180 - 374
Target Start/End: Complemental strand, 28353115 - 28352920
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata--atcatagttt 277  Q
    |||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||  ||||||||||    
T  28353115 aacagaatcaagatttcc-aaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataaccttttctcagaaaataatatcatagttt 28353017  T
Q  278 aaacctgcaaa--atcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||||||| |||  ||||||| || || || ||| ||||||||||||||||   ||| ||| |||||||||||| ||| ||||||||||||  ||||||||    
T  28353016 aaacctgtaaaagatcacgcaagcaagcatatc-aaaaatttccagaatt--tagataaagccgtaaccgtaaacacaaaatctagatccgcaaggatct 28352920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 180 - 374
Target Start/End: Complemental strand, 28368300 - 28368105
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata--atcatagttt 277  Q
    |||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||  ||||||||||    
T  28368300 aacagaatcaagatttcc-aaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataaccttttctcagaaaataatatcatagttt 28368202  T
Q  278 aaacctgcaaa--atcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||||||| |||  ||||||| || || || ||| ||||||||||||||||   ||| ||| |||||||||||| ||| ||||||||||||  ||||||||    
T  28368201 aaacctgtaaaagatcacgcaagcaagcatatc-aaaaatttccagaatt--tagataaagccgtaaccgtaaacacaaaatctagatccgcaaggatct 28368105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 19668187 - 19668270
Alignment:
Q  12 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 95  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19668187 cacagaatcaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaaacagt 19668270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 19683549 - 19683632
Alignment:
Q  12 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 95  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19683549 cacagaatcaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaaacagt 19683632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 180 - 374
Target Start/End: Complemental strand, 19199470 - 19199277
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctca-aaaaataatcatagttta 278  Q
    |||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |  ||||  | |||    
T  19199470 aacagaatcaagatttcc-aaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataaacttttctcagaaataatatcactg-tta 19199373  T
Q  279 aacctgcaaaatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||  |||||||||| ||  |||||||||  |||||||||||||||||||   ||| |||||||||||| ||| ||| ||||||||||||||||||    
T  19199372 aacct-aaaaatcacgcaagcaaaacagatc-caaaatttccagaattcaaaaccaaagccgtaaccgtaaacacaaaacctagatccataaggatct 19199277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 180 - 374
Target Start/End: Complemental strand, 19214525 - 19214332
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctca-aaaaataatcatagttta 278  Q
    |||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |  ||||  | |||    
T  19214525 aacagaatcaagatttcc-aaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataaacttttctcagaaataatatcactg-tta 19214428  T
Q  279 aacctgcaaaatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||  |||||||||| ||  |||||||||  |||||||||||||||||||   ||| |||||||||||| ||| ||| ||||||||||||||||||    
T  19214427 aacct-aaaaatcacgcaagcaaaacagatc-caaaatttccagaattcaaaaccaaagccgtaaccgtaaacacaaaacctagatccataaggatct 19214332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 204 - 374
Target Start/End: Original strand, 31349901 - 31350078
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata---atcatagtttaaacctgcaaaa-----tcacgc 295  Q
    |||||||||||||| |||||||||||||| | ||||||||||||   |||| ||| | ||| ||   ||||  ||||||||||| ||||     ||||||    
T  31349901 tttcctccattaaaagtttcaaccaaaacttcaggtaaaactcattttcttctcttagaaagtattaatcacggtttaaacctgtaaaaaagaatcacgc 31350000  T
Q  296 gagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
     || | |||||||||||||| |||||||||||||| || || |||||||||| ||||||| ||||||||||||||||||    
T  31350001 aagcagcagatctaaaaatt-ccagaattcaaagataagactgtaaccgtaaacacgaaacctagatccataaggatct 31350078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 204 - 374
Target Start/End: Original strand, 31363701 - 31363878
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata---atcatagtttaaacctgcaaaa-----tcacgc 295  Q
    |||||||||||||| |||||||||||||| | ||||||||||||   |||| ||| | ||| ||   ||||  ||||||||||| ||||     ||||||    
T  31363701 tttcctccattaaaagtttcaaccaaaacttcaggtaaaactcattttcttctcttagaaagtattaatcacggtttaaacctgtaaaaaagaatcacgc 31363800  T
Q  296 gagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
     || | |||||||||||||| |||||||||||||| || || |||||||||| ||||||| ||||||||||||||||||    
T  31363801 aagcagcagatctaaaaatt-ccagaattcaaagataagactgtaaccgtaaacacgaaacctagatccataaggatct 31363878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 266 - 374
Target Start/End: Complemental strand, 3338541 - 3338431
Alignment:
Q  266 taatcatagtttaaacctgcaaaa--tcacgcgagaaa--cagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctaga 361  Q
    ||||||||||||||||||| ||||  |||||| || ||  || ||| | ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  3338541 taatcatagtttaaacctgtaaaaaatcacgcaagcaaagcatatcaagaaatttccagaattcaaaga--aaaccgtaaccgtaagcacgaaacctaga 3338444  T
Q  362 tccataaggatct 374  Q
    |||||||||||||    
T  3338443 tccataaggatct 3338431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 236 - 374
Target Start/End: Complemental strand, 4487272 - 4487134
Alignment:
Q  236 aggtaaaactcagaatcttttctcaaaaaata-atcatagtttaaacctgcaaaatcacgcgag-aaacagatctaaaaatttccagaattcaaagagaa 333  Q
    |||||||||||||||||| |  |||||||  | ||||||||||||||||||||||||||| ||  |||||||   ||||||||||||||| || | ||||    
T  4487272 aggtaaaactcagaatctctcttcaaaaataatatcatagtttaaacctgcaaaatcacgtgaataaacagaaa-aaaaatttccagaat-cacaaagaa 4487175  T
Q  334 aaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||| ||||||||| ||| ||| ||||||||||||||||||    
T  4487174 aaccataaccgtaaacacaaaacctagatccataaggatct 4487134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 276 - 374
Target Start/End: Complemental strand, 40008648 - 40008553
Alignment:
Q  276 ttaaacctgcaaaatcacgcgagaaa-cagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||||||||| ||||||||||||| || || |||  |||||||||||||||||||||  ||||| ||||||||| ||||||| ||||||||||||||||||    
T  40008648 ttaaacctgtaaaatcacgcgagcaagcatatc--aaaatttccagaattcaaaga--aaaccataaccgtaaacacgaaacctagatccataaggatct 40008553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 256
Target Start/End: Complemental strand, 31480829 - 31480770
Alignment:
Q  197 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatctttt 256  Q
    ||||||| || ||||||||||||||||| |||||||||||||||||||||| | ||||||    
T  31480829 ccaaagaatttctccattaaaggtttcagccaaaaccttaggtaaaactcatactctttt 31480770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 256
Target Start/End: Complemental strand, 31495975 - 31495916
Alignment:
Q  197 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatctttt 256  Q
    ||||||| || ||||||||||||||||| |||||||||||||||||||||| | ||||||    
T  31495975 ccaaagaatttctccattaaaggtttcagccaaaaccttaggtaaaactcatactctttt 31495916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 301 - 374
Target Start/End: Original strand, 44570303 - 44570375
Alignment:
Q  301 acagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||||||| ||| ||||||||||||||||| |||  |||||||||||| ||| ||| ||||||||||||||||||    
T  44570303 acagatccaaagatttccagaattcaaagcgaag-ccgtaaccgtaaacacaaaacctagatccataaggatct 44570375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 294
Target Start/End: Original strand, 3987863 - 3987938
Alignment:
Q  220 tttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata--atcatagtttaaacctgcaaaatcacg 294  Q
    ||||||||||||| | |||||||||||||||| | |  ||||| ||||  |||||||||||||||||||||||||||    
T  3987863 tttcaaccaaaac-tcaggtaaaactcagaatttctcttcaaagaatagtatcatagtttaaacctgcaaaatcacg 3987938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 33252701 - 33252756
Alignment:
Q  240 aaaactcagaatcttttctcaaaaaataatcatagtttaaacctgcaaaatcacgc 295  Q
    ||||||||||| || ||  ||||| | |||||||||||||||||||||||||||||    
T  33252701 aaaactcagaacctctttgcaaaataaaatcatagtttaaacctgcaaaatcacgc 33252756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 33267904 - 33267959
Alignment:
Q  240 aaaactcagaatcttttctcaaaaaataatcatagtttaaacctgcaaaatcacgc 295  Q
    ||||||||||| || ||  ||||| | |||||||||||||||||||||||||||||    
T  33267904 aaaactcagaacctctttgcaaaataaaatcatagtttaaacctgcaaaatcacgc 33267959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 373
Target Start/End: Complemental strand, 4818823 - 4818673
Alignment:
Q  221 ttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaa--ataatcatagtttaaacctgcaaaatcacgcgag-aaacagatctaaaaatttc 317  Q
    |||||||||||| | ||||||||||||||||   |  |||||||  |||||||  ||| ||||||| ||||||||| ||  |||||||   |||| ||||    
T  4818823 ttcaaccaaaacttcaggtaaaactcagaattcctcttcaaaaattataatcacggtt-aaacctgtaaaatcacgtgaataaacaga---aaaattttc 4818728  T
Q  318 cagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatc 373  Q
    |||||| || | |||||||| ||||||||| ||| ||| |||||||||||||||||    
T  4818727 cagaat-cacaaagaaaaccataaccgtaaacacaaaacctagatccataaggatc 4818673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 6053984 - 6053923
Alignment:
Q  313 atttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||||||||||||||||    || |||||||||||| ||| ||| ||||||||||||||||||    
T  6053984 atttccagaattcaaaagcgaagccgtaaccgtaaacacaaaacctagatccataaggatct 6053923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 247
Target Start/End: Complemental strand, 3338641 - 3338574
Alignment:
Q  180 aacagaatcaagttctcccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaactca 247  Q
    ||||||||||| || | ||||||| |||||||||| ||| |||||||||||||| | ||||||||||||    
T  3338641 aacagaatcaaatt-ttccaaagattttcctccataaaaagtttcaaccaaaacttcaggtaaaactca 3338574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 2e-40; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 180 - 374
Target Start/End: Original strand, 26522010 - 26522207
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaa---ataatcatagtt 276  Q
    |||||||||||  | | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||    |||||||||||    
T  26522010 aacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataatctcttttcaaaaagtgttaatcatagtt 26522109  T
Q  277 taaacctgcaa--aatcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatc 373  Q
    ||| |||| ||  |||||||  || || || ||| |||||||||||||||||||  |||||||||||||||||| ||||||| |||||||||||||||||    
T  26522110 taagcctgtaaacaatcacgtaagcaagcatatc-aaaaatttccagaattcaa--agaaaaccgtaaccgtaaacacgaaacctagatccataaggatc 26522206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 26429027 - 26429110
Alignment:
Q  12 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26429027 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 26429110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 26444465 - 26444548
Alignment:
Q  12 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26444465 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 26444548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 187 - 374
Target Start/End: Original strand, 31118973 - 31119165
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa--aataatcatagtttaaacctg 284  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||  | |||||||||    
T  31118973 tcaagttttcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaagtaat-atcactg-ttaaacctg 31119070  T
Q  285 -----caaaatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
          | |||||||| ||  || || ||| |||||||||||||||||||  |||||||||||||||||| ||||||| ||||||||||||||||||    
T  31119071 tagaaaacaatcacgcaagcaaagcatatcaaaaaatttccagaattcaa--agaaaaccgtaaccgtaaacacgaaacctagatccataaggatct 31119165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 187 - 374
Target Start/End: Original strand, 31133148 - 31133340
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa--aataatcatagtttaaacctg 284  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||  | |||||||||    
T  31133148 tcaagttttcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaagtaat-atcactg-ttaaacctg 31133245  T
Q  285 -----caaaatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
          | |||||||| ||  || || ||| |||||||||||||||||||  |||||||||||||||||| ||||||| ||||||||||||||||||    
T  31133246 tagaaaacaatcacgcaagcaaagcatatcaaaaaatttccagaattcaa--agaaaaccgtaaccgtaaacacgaaacctagatccataaggatct 31133340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 187 - 374
Target Start/End: Complemental strand, 32999454 - 32999266
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa-aataatcatagtttaaacctgc 285  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||  | ||||||||      
T  32999454 tcaagttttcccaaagttttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaagtattatcactg-ttaaacctaa 32999356  T
Q  286 aaa--atcacgcgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||  ||||||| || || |||||  ||||||||||||| |||||||  ||||||||||||||| ||| ||| ||||||||||||||||||    
T  32999355 aaaatatcacgcaagcaatagatc-caaaatttccagaactcaaagacgaaaccgtaaccgtaaacacaaaacctagatccataaggatct 32999266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 197 - 374
Target Start/End: Original strand, 26696037 - 26696216
Alignment:
Q  197 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa--aataatcatagtttaaacctg-caaaatcac 293  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||  |||||||| ||||||    |||||||||||||||| ||  ||||||||    
T  26696037 ccaaagagtttctccattaaaggtttcaaccaaaaccttaggtaaaactcgtaatcttttttcaaaagtgttaatcatagtttaaacttgtaaaaatcac 26696136  T
Q  294 gcgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    || || || |||||  ||||||||||||||||||||  |||||||||||||||| ||| ||| ||||||||||||||||||    
T  26696137 gcaagcaatagatc-caaaatttccagaattcaaagccaaaaccgtaaccgtaaacacaaaacctagatccataaggatct 26696216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 204 - 374
Target Start/End: Complemental strand, 5138212 - 5138036
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaat---aatcatagtttaaacctgcaaaa--tcacgcgag 298  Q
    |||||||||||||| |||||||||||||| | ||||||||||||   ||| | |||||||| |   |||||||||||||||||| ||||  |||||| ||    
T  5138212 tttcctccattaaaagtttcaaccaaaacttcaggtaaaactcattttctct-ctcaaaaagtgttaatcatagtttaaacctgtaaaaaatcacgcaag 5138114  T
Q  299 --aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
      |||||||||||||||||||||||||||||||| || ||||||||||||| ||| ||||||||||||||||||||||    
T  5138113 cgaaacagatctaaaaatttccagaattcaaagataagaccgtaaccgtaaacacaaaatctagatccataaggatct 5138036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 204 - 374
Target Start/End: Complemental strand, 5151485 - 5151309
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaat---aatcatagtttaaacctgcaaaa--tcacgcgag 298  Q
    |||||||||||||| |||||||||||||| | ||||||||||||   ||| | |||||||| |   |||||||||||||||||| ||||  |||||| ||    
T  5151485 tttcctccattaaaagtttcaaccaaaacttcaggtaaaactcattttctct-ctcaaaaagtgttaatcatagtttaaacctgtaaaaaatcacgcaag 5151387  T
Q  299 --aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
      |||||||||||||||||||||||||||||||| || ||||||||||||| ||| ||||||||||||||||||||||    
T  5151386 cgaaacagatctaaaaatttccagaattcaaagataagaccgtaaccgtaaacacaaaatctagatccataaggatct 5151309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 276 - 371
Target Start/End: Original strand, 16161161 - 16161256
Alignment:
Q  276 ttaaacctgcaaaatcacgcgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataagga 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||| ||| |||||||||||||||    
T  16161161 ttaaacctgcaaaatcacgcgagaaacagatctaaaaatttccagaattcaaagataagaccgtaaccgtaaacacaaaacctagatccataagga 16161256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 197 - 374
Target Start/End: Original strand, 4273534 - 4273716
Alignment:
Q  197 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata--atcatagttt-aaacctg---caaaat 290  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||  | | |||||| ||||||  |||||||||| |||||||    |||||    
T  4273534 ccaaagattttctccattaaaggtttcaaccaaaacctcaggtaaaactcagtttttcttctcagaaaatagtatcatagtttaaaacctgtaaaaaaat 4273633  T
Q  291 cacgcgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||||| || ||||||||  ||||||||||||| |||||||  ||||||||||||||| ||| ||| ||||||||||||||||||    
T  4273634 cacgcaagcaacagatc-caaaatttccagaactcaaagacgaaaccgtaaccgtaaacacaaaacctagatccataaggatct 4273716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 187 - 374
Target Start/End: Complemental strand, 26686235 - 26686043
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa--aataatcatagtttaaacctg 284  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| ||||  | |||||||||    
T  26686235 tcaagttttcccaaagatttcctccattaaaggtttcaaccagaaccttaggtaaaactcagaatcttttctcaaaagtaat-atcactg-ttaaacctg 26686138  T
Q  285 -----caaaatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
          | |||||||| ||  || |  ||| |||||||||||||||||||  ||||| |||||||||||| ||||||| ||||||||||||||||||    
T  26686137 tagaaaacaatcacgcaagtaaagcgtatcaaaaaatttccagaattcaa--agaaagccgtaaccgtaaacacgaaacctagatccataaggatct 26686043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 187 - 374
Target Start/End: Complemental strand, 26689776 - 26689584
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa--aataatcatagtttaaacctg 284  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| ||||  | |||||||||    
T  26689776 tcaagttttcccaaagatttcctccattaaaggtttcaaccagaaccttaggtaaaactcagaatcttttctcaaaagtaat-atcactg-ttaaacctg 26689679  T
Q  285 -----caaaatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
          | |||||||| ||  || |  ||| |||||||||||||||||||  ||||| |||||||||||| ||||||| ||||||||||||||||||    
T  26689678 tagaaaacaatcacgcaagtaaagcgtatcaaaaaatttccagaattcaa--agaaagccgtaaccgtaaacacgaaacctagatccataaggatct 26689584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 187 - 374
Target Start/End: Complemental strand, 26265844 - 26265652
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa-aataatcatagtttaaacctgc 285  Q
    ||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  || ||||  | ||||||||      
T  26265844 tcaagttttctcaaagttttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagcatcttttctcaaaagtattatcactg-ttaaacctaa 26265746  T
Q  286 aaa----atcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||    ||||||| ||  |||||||||  |||||||||||||||||||   |||||||||||||||| ||| ||| ||||||||||||||||||    
T  26265745 aaaaaatatcacgcaagtaaaacagatc-caaaatttccagaattcaaaaccaaaaccgtaaccgtaaacacaaaacctagatccataaggatct 26265652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 187 - 374
Target Start/End: Complemental strand, 26325876 - 26325684
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa-aataatcatagtttaaacctgc 285  Q
    ||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  || ||||  | ||||||||      
T  26325876 tcaagttttctcaaagttttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagcatcttttctcaaaagtattatcactg-ttaaacctaa 26325778  T
Q  286 aaa----atcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||    ||||||| ||  |||||||||  |||||||||||||||||||   |||||||||||||||| ||| ||| ||||||||||||||||||    
T  26325777 aaaaaatatcacgcaagtaaaacagatc-caaaatttccagaattcaaaaccaaaaccgtaaccgtaaacacaaaacctagatccataaggatct 26325684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 187 - 374
Target Start/End: Complemental strand, 26676098 - 26675906
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa--aataatcatagtttaaacctg 284  Q
    ||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||  ||| ||||  | |||||||||    
T  26676098 tcaagttttcccaaagatttcctccattaaaggtttcaaccaggaccttaggtaaaactcagaatcttttctcaaaagtaat-atcactg-ttaaacctg 26676001  T
Q  285 -----caaaatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
          | |||||||| ||  || |  ||| |||||||||||||||||||  ||||| |||||||||||| ||||||| ||||||||||||||||||    
T  26676000 tagaaaacaatcacgcaagtaaagcgtatcaaaaaatttccagaattcaa--agaaagccgtaaccgtaaacacgaaacctagatccataaggatct 26675906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 180 - 374
Target Start/End: Complemental strand, 4136319 - 4136126
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctca-aaaaataatcatagttta 278  Q
    |||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||| ||| |  ||||  | |||    
T  4136319 aacagaatcaagatttcc-aaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataaactttcctcagaaataatatcactg-tta 4136222  T
Q  279 aacctgcaaaatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||  |||||||||| ||  ||| |||||  ||||||||||||||||||||  |||||||||||||||| ||| ||| ||||||||||||| ||||    
T  4136221 aacct-aaaaatcacgcaagcaaaatagatc-caaaatttccagaattcaaagccaaaaccgtaaccgtaaacacaaaacctagatccataagaatct 4136126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 180 - 374
Target Start/End: Complemental strand, 4151245 - 4151052
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctca-aaaaataatcatagttta 278  Q
    |||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||| ||| |  ||||  | |||    
T  4151245 aacagaatcaagatttcc-aaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataaactttcctcagaaataatatcactg-tta 4151148  T
Q  279 aacctgcaaaatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||  |||||||||| ||  ||| |||||  ||||||||||||||||||||  |||||||||||||||| ||| ||| ||||||||||||| ||||    
T  4151147 aacct-aaaaatcacgcaagcaaaatagatc-caaaatttccagaattcaaagccaaaaccgtaaccgtaaacacaaaacctagatccataagaatct 4151052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 187 - 374
Target Start/End: Complemental strand, 26660905 - 26660713
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa--aataatcatagtttaaacctg 284  Q
    ||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||  ||| ||||  | |||||||||    
T  26660905 tcaagttttcccaaagatttcctccattaaaggtttcaaccaggaccttaggtaaaactcataatcttttctcaaaagtaat-atcactg-ttaaacctg 26660808  T
Q  285 -----caaaatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
          | |||||||| ||  || |  ||| |||||||||||||||||||  ||||| |||||||||||| ||||||| ||||||||||||||||||    
T  26660807 tagaaaacaatcacgcaagtaaagcgtatcaaaaaatttccagaattcaa--agaaagccgtaaccgtaaacacgaaacctagatccataaggatct 26660713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 373
Target Start/End: Complemental strand, 11028017 - 11027834
Alignment:
Q  197 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata--atcatagttt-aaacctg----caaaa 289  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||  | | |||| | ||||||  |||||||||| |||||||     ||||    
T  11028017 ccaaagattttctccattaaaggtttcaaccaaaacctcaggtaaaactcagtttttcttcttagaaaatagtatcatagtttaaaacctgtcaaaaaaa 11027918  T
Q  290 tcacgcgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagca-cgaaatctagatccataaggatc 373  Q
    |||||| || ||||||||  ||||||||||||| ||||||| ||||| |||||||||| || | ||| |||||||| ||||||||    
T  11027917 tcacgcaagcaacagatc-caaaatttccagaactcaaagacaaaactgtaaccgtaaacatcaaaacctagatccgtaaggatc 11027834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 3439483 - 3439538
Alignment:
Q  240 aaaactcagaatcttttctcaaaaaataatcatagtttaaacctgcaaaatcacgc 295  Q
    ||||||||||| || ||  ||||| | |||||||||||||||||||||||||||||    
T  3439483 aaaactcagaacctctttacaaaataaaatcatagtttaaacctgcaaaatcacgc 3439538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 21475472 - 21475527
Alignment:
Q  240 aaaactcagaatcttttctcaaaaaataatcatagtttaaacctgcaaaatcacgc 295  Q
    ||||||||||| || ||  ||||| | |||||||||||||||||||||||||||||    
T  21475472 aaaactcagaacctctttacaaaataaaatcatagtttaaacctgcaaaatcacgc 21475527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 24583537 - 24583482
Alignment:
Q  240 aaaactcagaatcttttctcaaaaaataatcatagtttaaacctgcaaaatcacgc 295  Q
    ||||||||||| || ||  ||||| | |||||||||||||||||||||||||||||    
T  24583537 aaaactcagaacctctttacaaaataaaatcatagtttaaacctgcaaaatcacgc 24583482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 8e-40; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 10934946 - 10935029
Alignment:
Q  12 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10934946 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 10935029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 10954137 - 10954220
Alignment:
Q  12 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10954137 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 10954220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 187 - 374
Target Start/End: Original strand, 14893641 - 14893833
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa--aataatcatagtttaaacctg 284  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||  | |||||||||    
T  14893641 tcaagttttcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaagtaat-atcactg-ttaaacctg 14893738  T
Q  285 -----caaaatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
          | |||||||| ||  || || ||| |||||||||||||||||||  |||||||||||||||||| ||||||| ||||||||||||||||||    
T  14893739 tagaaaacaatcacgcaagcaaagcatatcaaaaaatttccagaattcaa--agaaaaccgtaaccgtaaacacgaaacctagatccataaggatct 14893833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 180 - 374
Target Start/End: Complemental strand, 30728365 - 30728169
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata--atcatagttt 277  Q
    |||||||||||| | ||| |||||||| ||||||||||||||||||||||||||| |||||||||||||| | | |||| | ||||||  ||||||||||    
T  30728365 aacagaatcaaggtttcc-aaagattttctccattaaaggtttcaaccaaaacctcaggtaaaactcagattttcttcttagaaaatagtatcatagttt 30728267  T
Q  278 aaacctg-caaaatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||  |||||||||| ||  |||||||||||||||||||||||||  | ||| ||| |||||||||||| ||| ||| ||||||||||||||||||    
T  30728266 aaacctgtaaaaatcacgcaagcaaaacagatctaaaaatttccagaat--acagataaagccgtaaccgtaaacacaaaacctagatccataaggatct 30728169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 9078470 - 9078553
Alignment:
Q  12 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  9078470 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgatctcaagcactgatcacgaggaagcagt 9078553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 187 - 374
Target Start/End: Complemental strand, 41784388 - 41784197
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa-aataatcatagtttaaacctgc 285  Q
    ||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||  | ||||||||      
T  41784388 tcaagttttcccaaagtcttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaagtattatcactg-ttaaacctat 41784290  T
Q  286 aaa-----atcacgcgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||     ||||||| || || |||||  ||||||||||||| |||||||  ||||||||||||||| ||||||| ||||||||||||||||||    
T  41784289 aaaaaaatatcacgcaagcaatagatc-caaaatttccagaactcaaagacgaaaccgtaaccgtaaacacgaaacctagatccataaggatct 41784197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 187 - 374
Target Start/End: Complemental strand, 41799656 - 41799465
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa-aataatcatagtttaaacctgc 285  Q
    ||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||  | ||||||||      
T  41799656 tcaagttttcccaaagtcttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaagtattatcactg-ttaaacctat 41799558  T
Q  286 aaa-----atcacgcgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||     ||||||| || || |||||  ||||||||||||| |||||||  ||||||||||||||| ||||||| ||||||||||||||||||    
T  41799557 aaaaaaatatcacgcaagcaatagatc-caaaatttccagaactcaaagacgaaaccgtaaccgtaaacacgaaacctagatccataaggatct 41799465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 197 - 374
Target Start/End: Original strand, 36507078 - 36507259
Alignment:
Q  197 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggt-aaaactcagaatcttttctcaaaa---aataatcatagtttaaa-cctg-caaaat 290  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || ||||||     ||||||||||||||| ||||  |||||    
T  36507078 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaaactcataatctcttttcaaaaggtgttaatcatagtttaaagcctgtaaaaat 36507177  T
Q  291 cacgcgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||||  ||    |||   | |||||||||||| |||||||||||||| ||||||||| ||||||| ||||||||||||||||||    
T  36507178 cacgtaag--cgagaagaataaatttccagaactcaaagagaaaaccataaccgtaaacacgaaacctagatccataaggatct 36507259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 180 - 289
Target Start/End: Original strand, 16671282 - 16671392
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata--atcatagttt 277  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||  | |||||| | ||||||  ||||||||||    
T  16671282 aacagaatcaagttttcc-aaagatttcctccattaaaggtttcaaccaaaacctcaggtaaaactcagttttttttcttagaaaatagtatcatagttt 16671380  T
Q  278 aaacctgcaaaa 289  Q
    ||||||| ||||    
T  16671381 aaacctgtaaaa 16671392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 286 - 374
Target Start/End: Original strand, 47200998 - 47201086
Alignment:
Q  286 aaaatcacgcgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||||| || | ||||||||||||||||||||||||||||  |||||||||||||||| ||| |||  |||||||||||||||||    
T  47200998 aaaatcacgcaagcagcagatctaaaaatttccagaattcaaagccaaaaccgtaaccgtaaacacaaaacttagatccataaggatct 47201086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 180 - 374
Target Start/End: Original strand, 47766505 - 47766695
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata-atcatagttta 278  Q
    |||||||||||||||||| || ||||| | | || ||| ||||||| |||||| | |||||||||||||||| | || |||||||  | |||||||||||    
T  47766505 aacagaatcaagttctccgaa-gattttccctatcaaaagtttcaatcaaaacttcaggtaaaactcagaatttcttttcaaaaacaatatcatagttta 47766603  T
Q  279 aacctgcaaaatcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    | |||||||||||||| ||  |||||||   |||| |||||||||| || | |||||||| ||||||||| ||| ||| ||||||||||||||||||    
T  47766604 a-cctgcaaaatcacgtgaataaacaga---aaaattttccagaat-cacaaagaaaaccataaccgtaaacacaaaacctagatccataaggatct 47766695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 208 - 261
Target Start/End: Complemental strand, 13768163 - 13768110
Alignment:
Q  208 ctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaa 261  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  13768163 ctccattgaaggtttcaaccaaaaccttaggtaaaactcagaatctcttctcaa 13768110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 28579044 - 28579105
Alignment:
Q  313 atttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||||||||||||  ||  |||||||||||| ||| ||| ||||||||||||||||||    
T  28579044 atttccagaattcaaagccaaggccgtaaccgtaaacacaaaacctagatccataaggatct 28579105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 28594470 - 28594531
Alignment:
Q  313 atttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||||||||||||  ||  |||||||||||| ||| ||| ||||||||||||||||||    
T  28594470 atttccagaattcaaagccaaggccgtaaccgtaaacacaaaacctagatccataaggatct 28594531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 47353939 - 47353878
Alignment:
Q  313 atttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||||||||||||  ||  |||||||||||| ||| ||| ||||||||||||||||||    
T  47353939 atttccagaattcaaagccaaggccgtaaccgtaaacacaaaacctagatccataaggatct 47353878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 10937467 - 10937510
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactca 247  Q
    |||||||||||||| |||||||||||||| | ||||||||||||    
T  10937467 tttcctccattaaaagtttcaaccaaaacttcaggtaaaactca 10937510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 10956658 - 10956701
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactca 247  Q
    |||||||||||||| |||||||||||||| | ||||||||||||    
T  10956658 tttcctccattaaaagtttcaaccaaaacttcaggtaaaactca 10956701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 10971884 - 10971927
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactca 247  Q
    |||||||||||||| |||||||||||||| | ||||||||||||    
T  10971884 tttcctccattaaaagtttcaaccaaaacttcaggtaaaactca 10971927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 16186921 - 16186976
Alignment:
Q  240 aaaactcagaatcttttctcaaaaaataatcatagtttaaacctgcaaaatcacgc 295  Q
    ||||||||||| || ||  ||||| | |||||||||||||||||||||||||||||    
T  16186921 aaaactcagaacctctttacaaaataaaatcatagtttaaacctgcaaaatcacgc 16186976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 47200907 - 47200950
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactca 247  Q
    |||||||||||||| |||||||||||||| | ||||||||||||    
T  47200907 tttcctccattaaaagtttcaaccaaaacttcaggtaaaactca 47200950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1629 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold1629
Description:

Target: scaffold1629; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 180 - 373
Target Start/End: Complemental strand, 1150 - 957
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaataatcatagtttaa 279  Q
    |||||||||||| | ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |  ||||||||||||    
T  1150 aacagaatcaagatttcc-aaatatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatctcttctcaaaataagatcatagtttaa 1052  T
Q  280 acctg-caaaatcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatc-tagatccataaggatc 373  Q
    |||||  |||||||||| || ||||||||||  |||||||||||||||||| | |||||  ||||||||| ||| ||| | ||||||| ||||||||    
T  1051 acctgtaaaaatcacgcaagcaaacagatct-gaaatttccagaattcaaa-aaaaaactataaccgtaaacaccaaaacttagatccgtaaggatc 957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 180 - 374
Target Start/End: Original strand, 2262 - 2457
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata--atcatagttt 277  Q
    |||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||| ||||||  ||||||||||    
T  2262 aacagaatcaagatttcc-aaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaacttcttctcagaaaataatatcatagttt 2360  T
Q  278 aaacctg--caaaatcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||   |||||||||| || || || ||| |||||||||||||||||  ||| ||| |||||||||||| ||| ||| ||||||||| ||||||||    
T  2361 aaacctgtaaaaaatcacgcaagcaagcatatc-aaaaatttccagaattc--agataaagccgtaaccgtaaacacaaaacctagatccacaaggatct 2457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 187 - 374
Target Start/End: Complemental strand, 16937 - 16743
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa--aataatcatagtttaaacctg 284  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||  | |||||||||    
T  16937 tcaagttttcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaagtaat-atcactg-ttaaacctg 16840  T
Q  285 -----caaaatcacgcgag--aaacagatc--taaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
          | |||||||||||  || || |||   |||||||||||||||||||  |||||||||||||||||| ||||||| ||||||||||||||||||    
T  16839 tagaaaacaatcacgcgagcaaagcacatcaaaaaaaatttccagaattcaa--agaaaaccgtaaccgtaaacacgaaacctagatccataaggatct 16743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1179 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold1179
Description:

Target: scaffold1179; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 197 - 373
Target Start/End: Complemental strand, 1661 - 1480
Alignment:
Q  197 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa--aataatcatagtttaaacctgcaa--aatca 292  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||    ||||||||||||||||||| ||  |||||    
T  1661 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataatctcttttcaaaagtgttaatcatagtttaaacctgtaaacaatca 1562  T
Q  293 cgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagca-cgaaatctagatccataaggatc 373  Q
    ||| ||  || || ||| | |||||||||||||||||  |||||||||||||||||| || | ||| |||||||| ||||||||    
T  1561 cgcaagcaaagcatatcaagaaatttccagaattcaa--agaaaaccgtaaccgtaaacatcaaaacctagatccgtaaggatc 1480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 11190 - 11107
Alignment:
Q  12 cacagaaccaatttcctcgcaattcaaagtgcgagttcatcactgaaacgcgacgaactcaagcactgatcacgaggaagcagt 95  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  11190 cacagaatcaatttcctcgcaattcaaagtgcgagttcatcactgcaacgcgacgaactcaagcactgatcacgaggaaacagt 11107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 187 - 374
Target Start/End: Complemental strand, 13522 - 13331
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaa-aataatcatagtttaaacctgc 285  Q
    ||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  || ||||  | ||||||||      
T  13522 tcaagttttcccaaagttttcctccattaaaggtttcaaccaaaa-cttaggtaaaactcagaatcttttctcaaaagtattatcactg-ttaaacctaa 13425  T
Q  286 aaa------atcacgcgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||      ||||||| || || |||||  ||||||||||||| |||||||  ||||||||||||||| ||| ||| ||||||||||||||||||    
T  13424 aaaaaatatatcacgcaagcaatagatc-caaaatttccagaactcaaagacgaaaccgtaaccgtaaacacaaaacctagatccataaggatct 13331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 180 - 374
Target Start/End: Complemental strand, 28830 - 28631
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaa---ataatcatagtt 276  Q
    |||||||||||  | | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||    |||||||||||    
T  28830 aacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataatctattttcaaaaagtgttaatcatagtt 28731  T
Q  277 taaacctgcaa--aatcacgcgag--aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggat 372  Q
    |||||| | ||  |||||||| ||  || || |||| | | ||||||||| ||| | ||||| || ||||||||| ||| ||| ||||||||||||||||    
T  28730 taaaccggtaaacaatcacgcaagcaaagcatatct-agattttccagaa-tcacaaagaaagccataaccgtaaacacaaaacctagatccataaggat 28633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 258 - 374
Target Start/End: Original strand, 3146 - 3265
Alignment:
Q  258 tcaaaaaataat--catagtttaaacctgcaaaa-tcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacga 353  Q
    ||||||||||||  ||||| ||||||||| |||| |||||| || |||||||||||||| ||||||||||||||||| |||||||||||||||| ||| |    
T  3146 tcaaaaaataatatcatagcttaaacctgtaaaaatcacgcaagcaaacagatctaaaa-tttccagaattcaaagataaaaccgtaaccgtaaacacaa 3244  T
Q  354 aatctagatccataaggatct 374  Q
    || ||||||||||||||||||    
T  3245 aacctagatccataaggatct 3265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 180 - 374
Target Start/End: Original strand, 15291 - 15490
Alignment:
Q  180 aacagaatcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatct-tttctcaaa--aaataatcatagtt 276  Q
    |||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||     |||||||||||    
T  15291 aacagaatcaagatttcc-aaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcataatctctttttcaaaggtgttaatcatagtt 15389  T
Q  277 taaacctgcaa--aatcacgcgag---aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataagga 371  Q
    | |||| | ||  |||||||| ||   || || ||| | |||||||||||||||||  |||||  | ||||||||| ||| ||| |||||||||||||||    
T  15390 tgaaccggtaaacaatcacgcaagcaaaagcatatcaagaaatttccagaattcaa--agaaagtcataaccgtaaacacaaaacctagatccataagga 15487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0252 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 187 - 373
Target Start/End: Complemental strand, 1818 - 1634
Alignment:
Q  187 tcaagttctcccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaa-ataatcatagtttaaacctgc 285  Q
    ||||||| | || ||||||| ||| || ||| |||||||||||||| | |||||||||||||||| | || ||||||| |  |||||||||| |||||||    
T  1818 tcaagtttttccgaagattttctctatcaaaagtttcaaccaaaacttcaggtaaaactcagaatttcttttcaaaaacaatatcatagttt-aacctgc 1720  T
Q  286 aaaatcacgcg-agaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatc 373  Q
    ||||||||| | | |||||||   |||||||||||||| ||| | |||||||| ||||||||| ||| ||| |||||||||||||||||    
T  1719 aaaatcacgtgaataaacaga--aaaaaatttccagaa-tcacaaagaaaaccataaccgtaaacacaaaacctagatccataaggatc 1634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 268 - 374
Target Start/End: Complemental strand, 16674 - 16567
Alignment:
Q  268 atcatagtttaaacctgcaaaa-tcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatcca 365  Q
    ||||||||||||||||| |||| |||||| || ||||||||||||||||| |||||||||||||  ||| |||||||||||| ||| ||| |||||||||    
T  16674 atcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaaatt-ccagaattcaaaggtaaagccgtaaccgtaaacacaaaacctagatcca 16576  T
Q  366 taaggatct 374  Q
    |||||||||    
T  16575 taaggatct 16567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 9385 - 9274
Alignment:
Q  236 aggtaaaactcagaatcttttctcaaaaa-ataatcatagtttaaacctgcaaaatcacgcgagaaacagatctaaaaatttccagaattcaaagagaaa 334  Q
    ||||||||||||||| || || ||||||| | ||||||||||||||||||||||||||||| || |||| | |||||| ||||||||| ||| | |||||    
T  9385 aggtaaaactcagaacctcttttcaaaaataaaatcatagtttaaacctgcaaaatcacgcaagcaacaaacctaaaattttccagaa-tcacaaagaaa 9287  T
Q  335 accgtaaccgtaa 347  Q
    |||||||||||||    
T  9286 accgtaaccgtaa 9274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1760 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold1760
Description:

Target: scaffold1760; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 204 - 374
Target Start/End: Original strand, 869 - 1047
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaata---atcatagtttaaacctgcaaaa------tcacg 294  Q
    |||||||||||||| |||||||||||||| | ||||||||||||   |||| ||| | ||| ||   ||||  ||||||||||| ||||      |||||    
T  869 tttcctccattaaaagtttcaaccaaaacttcaggtaaaactcattttcttctcttagaaagtattaatcacggtttaaacctgtaaaaaaagaatcacg 968  T
Q  295 cgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    | || | |||||||||||||| |||||||||||||| || || |||||||||| ||||||| ||||||||||||||||||    
T  969 caagcagcagatctaaaaatt-ccagaattcaaagataagactgtaaccgtaaacacgaaacctagatccataaggatct 1047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 374
Target Start/End: Complemental strand, 416 - 329
Alignment:
Q  286 aaaatcacgcgagaaa-cagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||||||||||||| || || ||||||||||||||||||||||||||  ||||| ||||||||| ||||||| ||||||||||||||||||    
T  416 aaaatcacgcgagcaagcatatctaaaaatttccagaattcaaaga--aaaccataaccgtaaacacgaaacctagatccataaggatct 329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 130623 - 130571
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatctttt 256  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  130623 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactcatactctttt 130571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 373
Target Start/End: Complemental strand, 56296 - 56122
Alignment:
Q  197 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaactcagaatcttttctcaaaaaataat--catagtttaaacctgcaaaatcacg 294  Q
    |||||||||| ||| || ||| |||||||||||||| | |||||||||||||| | || |||  |||||||||  |||||||||||||||||||||||||    
T  56296 ccaaagattttctctatcaaaagtttcaaccaaaac-tcaggtaaaactcagagt-ttctcttcaaaaataatatcatagtttaaacctgcaaaatcacg 56199  T
Q  295 cg-agaaacagatctaaaaatttccagaat-tcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatc 373  Q
     | | |||||     |||| ||||||||||  ||||||  ||||| ||||||||| ||| ||| |||||||||||||||||    
T  56198 tgaataaaca----aaaaattttccagaatcacaaagatgaaaccataaccgtaaacacaaaacctagatccataaggatc 56122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 295
Target Start/End: Original strand, 91841 - 91900
Alignment:
Q  236 aggtaaaactcagaatcttttctcaaaaaataatcatagtttaaacctgcaaaatcacgc 295  Q
    ||||||||||||||| || || |||||| | |||||||||||||||||||||||||||||    
T  91841 aggtaaaactcagaacctcttttcaaaataaaatcatagtttaaacctgcaaaatcacgc 91900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1816 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1816
Description:

Target: scaffold1816; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 310 - 374
Target Start/End: Complemental strand, 1056 - 994
Alignment:
Q  310 aaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||||||||||||||||||||  || |||||||||||| ||| ||| ||||||||||||||||||    
T  1056 aaaatttccagaattcaaaga--aagccgtaaccgtaaacacaaaacctagatccataaggatct 994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1536 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1536
Description:

Target: scaffold1536; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 374
Target Start/End: Original strand, 520 - 657
Alignment:
Q  236 aggtaaaactcagaatcttttctcaaaaaata-atcatagtttaaacctgcaaaatcacgcg-agaaacagatctaaaaatttccagaattcaaagagaa 333  Q
    |||||||||||||||||| |  |||||||  | ||||||||||||||||||||||||||| | | ||||| |   |||| ||||||||| ||| | ||||    
T  520 aggtaaaactcagaatctctcttcaaaaataatatcatagtttaaacctgcaaaatcacgtgaataaacaca--aaaaagtttccagaa-tcacaaagaa 616  T
Q  334 aaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    |||| || |||||| ||| ||| ||||||||||||||||||    
T  617 aaccatagccgtaaacacaaaacctagatccataaggatct 657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 429 - 368
Alignment:
Q  313 atttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatccataaggatct 374  Q
    ||||||||||||||||    || |||||||||||||||| ||| ||||||||||||||||||    
T  429 atttccagaattcaaaagcgaagccgtaaccgtaagcacaaaacctagatccataaggatct 368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1803 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold1803
Description:

Target: scaffold1803; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 781 - 824
Alignment:
Q  204 tttcctccattaaaggtttcaaccaaaaccttaggtaaaactca 247  Q
    |||||||||||||| |||||||||||||| | ||||||||||||    
T  781 tttcctccattaaaagtttcaaccaaaacttcaggtaaaactca 824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1803; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 373
Target Start/End: Original strand, 876 - 962
Alignment:
Q  286 aaaatcacgcgagaaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagca-cgaaatctagatccataaggatc 373  Q
    |||||||||| || |||||||||| || ||||||||||||||  |||||||  ||||||||| || | ||| |||||||| ||||||||    
T  876 aaaatcacgcaagcaacagatctagaattttccagaattcaa--agaaaactataaccgtaaacatcaaaacctagatccgtaaggatc 962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University