View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16561_low_90 (Length: 311)
Name: NF16561_low_90
Description: NF16561
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16561_low_90 |
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Alignment Details
Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 14 - 298
Target Start/End: Complemental strand, 44038855 - 44038570
Alignment:
| Q |
14 |
gaagagaaaaatgataaaagggagataataaataatataaatatacggtattgatgtcggattttgtgtaagaaaattttctcttaagataatggaaaca |
113 |
Q |
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| T |
44038855 |
gaagagaaaaatgattaaagggagataaaaaataatataaatatacggtattgatgtcggattttgtgtaagaaaattttctcttaagataatggaaaca |
44038756 |
T |
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| Q |
114 |
ctttcacctaataatagttttacctaataggcatgccaacctcaagctactgcaaggggaagcaccggactacaccattacaaatgatatgatttacatt |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44038755 |
ctttcacctaataatagttttacctaataggcatgccaacctcaatctactgcaaggggaagcaccggactacaccattacaaatgatatgatttacatt |
44038656 |
T |
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| Q |
214 |
acaggtctaaatcgcgataacttaaagcattttagttgctttaagggaaatttagcgaaatg-aattcaaatccagattctttgtg |
298 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| | ||||||||| |
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| T |
44038655 |
acaggtctaaatcgcgataacttaaagcattttagttgcgttaagggaaatttagcgaaatgaaattcaaatccgggttctttgtg |
44038570 |
T |
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