View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16565_low_22 (Length: 224)
Name: NF16565_low_22
Description: NF16565
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16565_low_22 |
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Alignment Details
Target: chr1 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 16 - 210
Target Start/End: Complemental strand, 10691826 - 10691631
Alignment:
| Q |
16 |
atgaaataatcaagttaaaagatttcgaaaggatcgaaaatcctcattctgcctaccgcatctaggaaattttgaggctaaagaatgataaagtgcacaa |
115 |
Q |
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| T |
10691826 |
atgaaataatcaagttaaaagatttcgaaaggaccgaaaatcctcattctgcctacagcatctaggaaattttgaggctaaagaatgataaagtgcacaa |
10691727 |
T |
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| Q |
116 |
aatgcatttaggtataagtaatttgattaagtgtttattgaatcacatgtac-aagcacttgtgtggctatttttgtaactaaaactaaacaaagt |
210 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10691726 |
aatgcatttaggtataagtaatttgattaagtatttattgaatctcatgtacaaagcacttgtgtggctatttttgtaactaaaactaaacaaagt |
10691631 |
T |
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