View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16566_high_50 (Length: 236)

Name: NF16566_high_50
Description: NF16566
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16566_high_50
NF16566_high_50
[»] chr4 (36 HSPs)
chr4 (1-221)||(51780591-51780811)
chr4 (1-49)||(44375945-44375993)
chr4 (1-49)||(14987892-14987940)
chr4 (1-49)||(15241073-15241121)
chr4 (1-49)||(16700881-16700929)
chr4 (1-49)||(19913675-19913723)
chr4 (1-49)||(20877147-20877195)
chr4 (1-49)||(27536149-27536197)
chr4 (1-49)||(33703941-33703989)
chr4 (1-49)||(1617184-1617232)
chr4 (1-49)||(1756809-1756857)
chr4 (1-49)||(2481453-2481501)
chr4 (1-49)||(11639623-11639671)
chr4 (1-49)||(15669283-15669331)
chr4 (1-49)||(23776504-23776552)
chr4 (1-49)||(38055257-38055305)
chr4 (1-49)||(43290005-43290053)
chr4 (1-49)||(44379232-44379280)
chr4 (1-49)||(45424579-45424627)
chr4 (1-49)||(50055146-50055194)
chr4 (1-49)||(52139303-52139351)
chr4 (1-49)||(54189645-54189693)
chr4 (1-43)||(16703921-16703963)
chr4 (1-43)||(37464821-37464863)
chr4 (1-49)||(6611405-6611453)
chr4 (1-49)||(8932223-8932271)
chr4 (3-35)||(9595950-9595982)
chr4 (1-49)||(23269091-23269139)
chr4 (1-49)||(23704254-23704302)
chr4 (1-49)||(27488693-27488741)
chr4 (1-49)||(31969781-31969829)
chr4 (1-49)||(35490818-35490866)
chr4 (1-49)||(47632135-47632183)
chr4 (1-49)||(50353901-50353949)
chr4 (1-49)||(53717509-53717557)
chr4 (1-49)||(54412728-54412776)
[»] chr1 (38 HSPs)
chr1 (1-192)||(23322749-23322945)
chr1 (1-49)||(1170501-1170549)
chr1 (1-49)||(19715218-19715266)
chr1 (1-49)||(20089571-20089619)
chr1 (1-49)||(29695776-29695824)
chr1 (1-49)||(46761066-46761114)
chr1 (1-42)||(17591788-17591829)
chr1 (1-49)||(1168603-1168651)
chr1 (1-49)||(2473822-2473870)
chr1 (1-49)||(6765559-6765607)
chr1 (1-49)||(7145307-7145355)
chr1 (1-49)||(17587562-17587610)
chr1 (1-49)||(25897474-25897522)
chr1 (1-49)||(26580327-26580375)
chr1 (1-49)||(29288249-29288297)
chr1 (1-49)||(33510584-33510632)
chr1 (1-49)||(40092591-40092639)
chr1 (1-49)||(42370852-42370900)
chr1 (1-49)||(52696891-52696939)
chr1 (1-43)||(8120969-8121011)
chr1 (1-43)||(13996786-13996828)
chr1 (1-43)||(15554215-15554257)
chr1 (191-221)||(23322694-23322724)
chr1 (5-43)||(40149567-40149605)
chr1 (1-43)||(43905754-43905796)
chr1 (1-49)||(2347756-2347805)
chr1 (1-49)||(970581-970629)
chr1 (1-49)||(1940804-1940852)
chr1 (1-49)||(5215485-5215533)
chr1 (1-49)||(15717884-15717932)
chr1 (1-49)||(16052196-16052244)
chr1 (1-49)||(23498560-23498608)
chr1 (1-49)||(26663358-26663406)
chr1 (1-49)||(29078616-29078664)
chr1 (1-49)||(38829169-38829217)
chr1 (1-49)||(39260403-39260451)
chr1 (1-49)||(51359274-51359322)
chr1 (1-49)||(52753204-52753252)
[»] chr7 (25 HSPs)
chr7 (1-49)||(33846571-33846619)
chr7 (1-45)||(36849588-36849632)
chr7 (1-49)||(933386-933434)
chr7 (1-49)||(3511424-3511472)
chr7 (1-49)||(7164285-7164333)
chr7 (1-49)||(12097637-12097685)
chr7 (1-49)||(12101225-12101273)
chr7 (1-49)||(15656013-15656061)
chr7 (1-49)||(16894554-16894602)
chr7 (1-49)||(17753701-17753749)
chr7 (1-49)||(24792379-24792427)
chr7 (1-49)||(25748588-25748636)
chr7 (1-49)||(30181071-30181119)
chr7 (1-49)||(32041643-32041691)
chr7 (1-49)||(33359137-33359185)
chr7 (1-49)||(42204256-42204304)
chr7 (1-49)||(42673562-42673610)
chr7 (1-49)||(42965043-42965091)
chr7 (1-49)||(43068020-43068068)
chr7 (1-49)||(48865734-48865782)
chr7 (1-43)||(8630767-8630809)
chr7 (1-43)||(19828371-19828413)
chr7 (1-43)||(22649747-22649789)
chr7 (1-49)||(20346589-20346637)
chr7 (5-49)||(46891386-46891430)
[»] chr3 (28 HSPs)
chr3 (1-49)||(53028314-53028362)
chr3 (1-49)||(15520185-15520233)
chr3 (1-49)||(35643314-35643362)
chr3 (1-49)||(37698186-37698234)
chr3 (1-49)||(42105014-42105062)
chr3 (1-49)||(54870217-54870265)
chr3 (1-43)||(34700438-34700480)
chr3 (1-49)||(2895282-2895330)
chr3 (1-49)||(8042704-8042752)
chr3 (1-49)||(12117701-12117749)
chr3 (1-49)||(15520733-15520781)
chr3 (1-49)||(20699246-20699294)
chr3 (1-49)||(20842391-20842439)
chr3 (1-49)||(21581139-21581187)
chr3 (1-49)||(22175033-22175081)
chr3 (1-49)||(25494328-25494376)
chr3 (1-49)||(25999485-25999533)
chr3 (1-49)||(26122911-26122959)
chr3 (1-49)||(32359356-32359404)
chr3 (1-49)||(35226544-35226592)
chr3 (1-49)||(38856190-38856238)
chr3 (1-49)||(42307948-42307996)
chr3 (1-49)||(44609376-44609424)
chr3 (1-49)||(50529026-50529074)
chr3 (1-34)||(12916003-12916036)
chr3 (1-42)||(38934042-38934083)
chr3 (1-49)||(32244217-32244265)
chr3 (1-49)||(48925046-48925094)
[»] chr2 (18 HSPs)
chr2 (1-43)||(22101210-22101252)
chr2 (1-49)||(5733499-5733547)
chr2 (1-49)||(28329894-28329942)
chr2 (1-49)||(30270736-30270784)
chr2 (1-49)||(31517272-31517320)
chr2 (1-49)||(2178826-2178874)
chr2 (1-49)||(3873301-3873349)
chr2 (1-49)||(16066351-16066399)
chr2 (1-49)||(26323243-26323291)
chr2 (1-49)||(33906104-33906152)
chr2 (1-49)||(39635552-39635600)
chr2 (1-49)||(42446626-42446674)
chr2 (2-49)||(30420224-30420271)
chr2 (1-43)||(1482966-1483008)
chr2 (1-43)||(19901201-19901243)
chr2 (1-49)||(1108379-1108427)
chr2 (1-49)||(6174885-6174933)
chr2 (1-49)||(18806941-18806989)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-49)||(145302-145350)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-49)||(36805-36853)
[»] chr8 (27 HSPs)
chr8 (1-49)||(2042581-2042629)
chr8 (1-49)||(10836812-10836860)
chr8 (1-49)||(18594639-18594687)
chr8 (1-49)||(24113223-24113271)
chr8 (1-49)||(35118088-35118136)
chr8 (1-43)||(8021821-8021863)
chr8 (1-43)||(44805007-44805049)
chr8 (2-43)||(9807363-9807404)
chr8 (1-49)||(144496-144544)
chr8 (1-49)||(2322069-2322117)
chr8 (1-49)||(4035949-4035997)
chr8 (1-49)||(14422805-14422853)
chr8 (1-49)||(22260687-22260735)
chr8 (1-49)||(28639384-28639432)
chr8 (1-49)||(29938163-29938211)
chr8 (1-49)||(33278502-33278550)
chr8 (1-49)||(33287082-33287130)
chr8 (1-49)||(34998953-34999001)
chr8 (1-49)||(38167212-38167260)
chr8 (1-49)||(40117909-40117957)
chr8 (1-49)||(41575615-41575663)
chr8 (1-49)||(6144330-6144378)
chr8 (1-49)||(7774866-7774914)
chr8 (1-49)||(7812097-7812145)
chr8 (5-49)||(13110510-13110554)
chr8 (1-49)||(34679514-34679562)
chr8 (1-49)||(39206688-39206736)
[»] chr6 (17 HSPs)
chr6 (1-49)||(52938-52986)
chr6 (1-49)||(53010-53058)
chr6 (1-49)||(3347580-3347628)
chr6 (1-49)||(6086656-6086704)
chr6 (1-49)||(11167342-11167390)
chr6 (1-49)||(26946933-26946981)
chr6 (4-49)||(18613643-18613688)
chr6 (1-49)||(1153695-1153743)
chr6 (1-49)||(3955823-3955871)
chr6 (1-49)||(9459665-9459713)
chr6 (1-49)||(20726889-20726937)
chr6 (1-49)||(26704396-26704444)
chr6 (1-49)||(30691953-30692001)
chr6 (1-49)||(33464431-33464479)
chr6 (1-49)||(16307065-16307113)
chr6 (1-49)||(17261130-17261178)
chr6 (1-49)||(21893557-21893605)
[»] chr5 (20 HSPs)
chr5 (1-49)||(31883247-31883295)
chr5 (1-49)||(1165658-1165706)
chr5 (1-49)||(1579139-1579187)
chr5 (1-49)||(1605628-1605676)
chr5 (1-49)||(3386543-3386591)
chr5 (1-49)||(3921684-3921732)
chr5 (1-49)||(4121040-4121088)
chr5 (1-49)||(8374395-8374443)
chr5 (1-49)||(9008114-9008162)
chr5 (1-49)||(16069456-16069504)
chr5 (1-49)||(16737504-16737552)
chr5 (1-41)||(24105736-24105776)
chr5 (1-49)||(27420961-27421009)
chr5 (1-49)||(27679226-27679274)
chr5 (1-49)||(38598507-38598555)
chr5 (1-34)||(26603014-26603047)
chr5 (1-49)||(20992203-20992251)
chr5 (1-49)||(27025059-27025107)
chr5 (1-49)||(33491253-33491301)
chr5 (1-49)||(33991243-33991291)
[»] scaffold0920 (1 HSPs)
scaffold0920 (1-49)||(3810-3858)
[»] scaffold0167 (1 HSPs)
scaffold0167 (1-49)||(23008-23056)
[»] scaffold1777 (1 HSPs)
scaffold1777 (1-49)||(63-111)
[»] scaffold0172 (1 HSPs)
scaffold0172 (1-49)||(10338-10386)


Alignment Details
Target: chr4 (Bit Score: 197; Significance: 1e-107; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 51780811 - 51780591
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagcttcgtatataatacggagcttatgccattataatgtcaccagcttcttttctc 100  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||    
T  51780811 tttcataagctgcttatgccatattttaataagcccaaattttaagctttgtatataatacggagcttatgccattataatgtcaccagcttcgattctc 51780712  T
Q  101 gcattccactttattcaaaacctataatttatttattatgtaattatcttttgctgtgacgagtagagaaaggggcctaattcgttatatacaatcacca 200  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51780711 gcattccactttattcaaaacctataatttatttaatatgtaattatcttttgctgtgacgagtagagaaaggggcctaattcgttatatacaatcacca 51780612  T
Q  201 tttaatatacaaattacaaac 221  Q
    |||||||||||||||||||||    
T  51780611 tttaatatacaaattacaaac 51780591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 44375945 - 44375993
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  44375945 tttcataaactgcttatgtcatattttaataagcctaaattttcagctt 44375993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14987892 - 14987940
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  14987892 tttcataagctgcttatgtcatattttaataagcctaaattttcagctt 14987940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15241121 - 15241073
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  15241121 tttcataagctgcttatgtcatattttaataagcctaaattttcagctt 15241073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 16700881 - 16700929
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  16700881 tttcataagctgcttatgtcatattttaataagcctaaattttcagctt 16700929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 19913723 - 19913675
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  19913723 tttcataagctgcttatgtcatattttaataagcctaaattttcagctt 19913675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 20877147 - 20877195
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  20877147 tttcataagctgcttatgtcatattttaataagcctaaattttcagctt 20877195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 27536197 - 27536149
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||||||||||||| |||||||||||||||| ||||||| |||||    
T  27536197 tttcataaactgcttatgccatattttaataagcctaaattttcagctt 27536149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 33703941 - 33703989
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  33703941 tttcataagctgcttatgtcatattttaataagcctaaattttcagctt 33703989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 1617184 - 1617232
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||| ||||||||||||||||||| ||||||| |||||    
T  1617184 tttcataagctgcttgtgtcatattttaataagcctaaattttcagctt 1617232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 1756857 - 1756809
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  1756857 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 1756809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2481501 - 2481453
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  2481501 tttcataagctgcttatgccatattttaataagccaaaattttcagctt 2481453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 11639671 - 11639623
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  11639671 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 11639623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 15669283 - 15669331
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||| ||||||||||| ||||||| |||||    
T  15669283 tttcataagctgcttatgtcatactttaataagcctaaattttcagctt 15669331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 23776552 - 23776504
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  23776552 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 23776504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 38055257 - 38055305
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  38055257 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 38055305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 43290053 - 43290005
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  43290053 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 43290005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 44379280 - 44379232
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    ||||||||  ||||||||||||||||||||||||| ||||||| |||||    
T  44379280 tttcataagttgcttatgtcatattttaataagcctaaattttcagctt 44379232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 45424627 - 45424579
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  45424627 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 45424579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 50055194 - 50055146
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  50055194 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 50055146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 52139303 - 52139351
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  52139303 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 52139351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 54189645 - 54189693
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  54189645 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 54189693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 16703921 - 16703963
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaatttt 43  Q
    |||||||| ||||||||| |||||||||||||||| |||||||    
T  16703921 tttcataagctgcttatgccatattttaataagcctaaatttt 16703963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 37464821 - 37464863
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaatttt 43  Q
    |||||||| ||||||||| |||||||||||||||| |||||||    
T  37464821 tttcataagctgcttatgccatattttaataagcctaaatttt 37464863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6611453 - 6611405
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||| |||||||||||||| ||||||| ||||||| |||||    
T  6611453 tttcataagctgtttatgtcatattttgataagcctaaattttcagctt 6611405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8932271 - 8932223
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| ||||||||||||| || ||||||| |||||    
T  8932271 tttcataagctgcttatgccatattttaataaacctaaattttcagctt 8932223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 9595982 - 9595950
Alignment:
Q  3 tcataaactgcttatgtcatattttaataagcc 35  Q
    |||||| ||||||||||||||||||||||||||    
T  9595982 tcataagctgcttatgtcatattttaataagcc 9595950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 23269139 - 23269091
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||  ||||||||||||||| ||||||| |||||    
T  23269139 tttcataagctgcttatgctatattttaataagcctaaattttcagctt 23269091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 23704302 - 23704254
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||  ||||||||||||||| ||||||| |||||    
T  23704302 tttcataagctgcttatgctatattttaataagcctaaattttcagctt 23704254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 27488741 - 27488693
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||  ||||||| |||||    
T  27488741 tttcataagctgcttatgccatattttaataagcttaaattttcagctt 27488693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 31969781 - 31969829
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||  ||||||||||||||| ||||||| |||||    
T  31969781 tttcataagctgcttatgctatattttaataagcctaaattttcagctt 31969829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 35490866 - 35490818
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    ||||||||  |||||||| |||||||||||||||| ||||||| |||||    
T  35490866 tttcataagttgcttatgccatattttaataagcctaaattttcagctt 35490818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 47632135 - 47632183
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||  ||||||| |||||    
T  47632135 tttcataagctgcttatgccatattttaataagcttaaattttcagctt 47632183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 50353901 - 50353949
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| || |||| |||||    
T  50353901 tttcataagctgcttatgccatattttaataagcctaatttttcagctt 50353949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 53717557 - 53717509
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| | |||||||||||||| ||||||| |||||    
T  53717557 tttcataagctgcttatgccctattttaataagcctaaattttcagctt 53717509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 54412728 - 54412776
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||| ||||||| | ||||||| |||||    
T  54412728 tttcataagctgcttatgtcatattctaataagtctaaattttcagctt 54412776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 2e-64; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 23322945 - 23322749
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagcttcgtata-----taatacggagcttatgccattataatgtcaccagcttctt 95  Q
    |||||||| |||||||||||||| |||||||||| ||||||||||||||| ||||     ||||||||||||||||||||||| ||||||| ||| ||      
T  23322945 tttcataagctgcttatgtcatactttaataagcgcaaattttaagcttcatatacagcttaatacggagcttatgccattattatgtcacgagcctcga 23322846  T
Q  96 ttctcgcattccactttattcaaaacctataatttatttattatgtaattatcttttgctgtgacgagtagagaaaggggcctaattcgttatatac 192  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  23322845 ttctagcattccactttactcaaaacctataatttatttattatgtaattatcttttgatgtgatgagtagagaaaggggcctaattcgttatatac 23322749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 1170549 - 1170501
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  1170549 tttcataagctgcttatgtcatattttaataagcctaaattttcagctt 1170501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 19715266 - 19715218
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  19715266 tttcataagctgcttatgtcatattttaataagcctaaatttttagctt 19715218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 20089571 - 20089619
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  20089571 tttcataagctgcttatgtcatattttaataagcctaaattttcagctt 20089619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 29695776 - 29695824
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  29695776 tttcataagctgcttatgtcatattttaataagcctaaattttcagctt 29695824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 46761066 - 46761114
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||||||||||||| |||||||||||||||| ||||||| |||||    
T  46761066 tttcataaactgcttatgccatattttaataagcctaaattttcagctt 46761114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 17591788 - 17591829
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattt 42  Q
    |||||||| |||||||||||||||||||||||||| ||||||    
T  17591788 tttcataagctgcttatgtcatattttaataagcctaaattt 17591829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 1168603 - 1168651
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  1168603 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 1168651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2473822 - 2473870
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||||||||||| |||||||| ||||||| |||||    
T  2473822 tttcataagctgcttatgtcatatttcaataagcctaaattttcagctt 2473870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 6765559 - 6765607
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||| | |||||||||||||||||||||||||| ||||||| |||||    
T  6765559 tttcatgagctgcttatgtcatattttaataagcctaaattttcagctt 6765607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 7145307 - 7145355
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  7145307 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 7145355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17587610 - 17587562
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  17587610 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 17587562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25897474 - 25897522
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  25897474 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 25897522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 26580375 - 26580327
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  26580375 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 26580327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 29288249 - 29288297
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  29288249 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 29288297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 33510584 - 33510632
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  33510584 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 33510632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 40092591 - 40092639
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  40092591 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 40092639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 42370900 - 42370852
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||| ||||||||||||||||||| ||||||| |||||    
T  42370900 tttcataagctgcttgtgtcatattttaataagcctaaattttcagctt 42370852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 52696891 - 52696939
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  52696891 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 52696939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8120969 - 8121011
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaatttt 43  Q
    |||||||| |||||||||||||||||||||||||  |||||||    
T  8120969 tttcataagctgcttatgtcatattttaataagcttaaatttt 8121011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 13996828 - 13996786
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaatttt 43  Q
    |||||||| ||||||||| |||||||||||||||| |||||||    
T  13996828 tttcataagctgcttatgccatattttaataagcctaaatttt 13996786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15554257 - 15554215
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaatttt 43  Q
    |||||||||||||| ||| |||||||||||||||| |||||||    
T  15554257 tttcataaactgctgatgccatattttaataagcctaaatttt 15554215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 221
Target Start/End: Complemental strand, 23322724 - 23322694
Alignment:
Q  191 acaatcaccatttaatatacaaattacaaac 221  Q
    |||||||||||||||||||||||||||||||    
T  23322724 acaatcaccatttaatatacaaattacaaac 23322694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 40149567 - 40149605
Alignment:
Q  5 ataaactgcttatgtcatattttaataagcccaaatttt 43  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  40149567 ataagctgcttatgtcatattttaataagcctaaatttt 40149605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 43905754 - 43905796
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaatttt 43  Q
    |||||||| ||||||||| |||||||||||||||| |||||||    
T  43905754 tttcataagctgcttatgccatattttaataagcctaaatttt 43905796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2347756 - 2347805
Alignment:
Q  1 tttcataaactgcttatgtcata-ttttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||| |||||||||||| ||||||| |||||    
T  2347756 tttcataagctgcttatgtcatatttttaataagcctaaattttcagctt 2347805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 970629 - 970581
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| ||||||||||||| || ||||||| |||||    
T  970629 tttcataagctgcttatgccatattttaataaacctaaattttcagctt 970581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 1940852 - 1940804
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    ||||||||  || |||||||||||||||||||||| ||||||| |||||    
T  1940852 tttcataagttgtttatgtcatattttaataagcctaaattttcagctt 1940804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 5215485 - 5215533
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    ||||||||  |||||||| |||||||||||||||| ||||||| |||||    
T  5215485 tttcataagttgcttatgccatattttaataagcctaaattttcagctt 5215533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 15717884 - 15717932
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||| ||||||||||| ||||||| |||||    
T  15717884 tttcataagctgcttatgccataatttaataagcctaaattttcagctt 15717932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 16052196 - 16052244
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| ||||||||||||||||  |||||| |||||    
T  16052196 tttcataagctgcttatgccatattttaataagcctgaattttcagctt 16052244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23498560 - 23498608
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    ||||||||  ||||||| ||||||||||||||||| ||||||| |||||    
T  23498560 tttcataagttgcttatatcatattttaataagcctaaattttcagctt 23498608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 26663358 - 26663406
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||| ||||| |||||||||||||||| ||||||| |||||    
T  26663358 tttcataagctgtttatgccatattttaataagcctaaattttcagctt 26663406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 29078616 - 29078664
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| ||||||||||||| || ||||||| |||||    
T  29078616 tttcataagctgcttatgccatattttaataaacctaaattttcagctt 29078664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 38829169 - 38829217
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||| || |||||||||||||||| ||||||| |||||    
T  38829169 tttcataagctgcttgtgccatattttaataagcctaaattttcagctt 38829217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 39260451 - 39260403
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    ||||||||  |||||||| |||||||||||||||| ||||||| |||||    
T  39260451 tttcataagttgcttatgccatattttaataagcctaaattttcagctt 39260403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 51359322 - 51359274
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    ||||||||  |||||||| |||||||||||||||| ||||||| |||||    
T  51359322 tttcataaggtgcttatgccatattttaataagcctaaattttcagctt 51359274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 52753252 - 52753204
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| || |||||| |||||||||||||||| ||||||| |||||    
T  52753252 tttcataagctacttatgccatattttaataagcctaaattttcagctt 52753204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 33846619 - 33846571
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  33846619 tttcataaactgcttatgtcatattttaataagcctaaattttcagctt 33846571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36849632 - 36849588
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaa 45  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||    
T  36849632 tttcataaactgtttatgtcatattttaataagctcaaattttaa 36849588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 933386 - 933434
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  933386 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 933434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 3511424 - 3511472
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  3511424 tttcataagctgcttatgccatattttaataagcctaaatttttagctt 3511472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 7164285 - 7164333
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  7164285 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 7164333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12097685 - 12097637
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| || ||||||||||||||||||||||| ||||||| |||||    
T  12097685 tttcataagctacttatgtcatattttaataagcctaaattttcagctt 12097637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12101273 - 12101225
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  12101273 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 12101225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 15656013 - 15656061
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  15656013 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 15656061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 16894602 - 16894554
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  16894602 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 16894554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 17753701 - 17753749
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  17753701 tttcataagctgcttatgccatattttaataagcctaaatttttagctt 17753749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 24792427 - 24792379
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  24792427 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 24792379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25748588 - 25748636
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  25748588 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 25748636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 30181119 - 30181071
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  30181119 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 30181071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 32041643 - 32041691
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||| ||||||| ||||||| |||||    
T  32041643 tttcataagctgcttatgtcatattttcataagcctaaattttcagctt 32041691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 33359185 - 33359137
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  33359185 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 33359137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 42204256 - 42204304
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  42204256 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 42204304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 42673562 - 42673610
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  42673562 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 42673610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 42965091 - 42965043
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  42965091 tttcataagctgcttatgccatattttaataagcctaaatttttagctt 42965043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 43068068 - 43068020
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| || ||||||||||||||||||||||| ||||||| |||||    
T  43068068 tttcataagcttcttatgtcatattttaataagcctaaattttcagctt 43068020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 48865734 - 48865782
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  48865734 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 48865782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8630767 - 8630809
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaatttt 43  Q
    |||||||| ||||||||| |||||||||||||||| |||||||    
T  8630767 tttcataagctgcttatgccatattttaataagcctaaatttt 8630809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19828371 - 19828413
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaatttt 43  Q
    ||||||||| |||||||| |||||||||||||||| |||||||    
T  19828371 tttcataaattgcttatgccatattttaataagccaaaatttt 19828413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 22649789 - 22649747
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaatttt 43  Q
    |||||||| ||||||||| |||||||||||||||| |||||||    
T  22649789 tttcataagctgcttatgccatattttaataagcctaaatttt 22649747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 20346589 - 20346637
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||| | ||||||| |||||    
T  20346589 tttcataagctgcttatgccatattttaataagtctaaattttcagctt 20346637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 46891430 - 46891386
Alignment:
Q  5 ataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||| ||||||||||||||||||||| |||| ||||||| |||||    
T  46891430 ataagctgcttatgtcatattttaattagcctaaattttcagctt 46891386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 53028314 - 53028362
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  53028314 tttcataaactgcttatgtcatattttaataagcctaaattttcagctt 53028362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15520233 - 15520185
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||||||||||||| |||||||||||||||| ||||||| |||||    
T  15520233 tttcataaactgcttatgccatattttaataagcctaaattttcagctt 15520185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 35643314 - 35643362
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  35643314 tttcataagctgcttatgtcatattttaataagcctaaattttgagctt 35643362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 37698234 - 37698186
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  37698234 tttcataagctgcttatgtcatattttaataagcctaaattttcagctt 37698186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 42105062 - 42105014
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  42105062 tttcataagctgcttatgtcatattttaataagcctaaattttcagctt 42105014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 54870265 - 54870217
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  54870265 tttcataagctgcttatgtcatattttaataagcctaaatttttagctt 54870217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 34700438 - 34700480
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaatttt 43  Q
    |||||||| |||||||||||||||||||||||||| |||||||    
T  34700438 tttcataagctgcttatgtcatattttaataagcctaaatttt 34700480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2895282 - 2895330
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  2895282 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 2895330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 8042704 - 8042752
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  8042704 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 8042752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12117749 - 12117701
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    ||||||||  ||||||||||||||||||||||||| ||||||| |||||    
T  12117749 tttcataagttgcttatgtcatattttaataagcctaaattttcagctt 12117701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 15520733 - 15520781
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  15520733 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 15520781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 20699246 - 20699294
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  20699246 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 20699294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20842439 - 20842391
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||| ||||||||||||||||| ||||||| |||||    
T  20842439 tttcataagctgcttatatcatattttaataagcctaaattttcagctt 20842391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 21581139 - 21581187
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  21581139 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 21581187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 22175081 - 22175033
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  22175081 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 22175033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 25494376 - 25494328
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  25494376 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 25494328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25999485 - 25999533
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  25999485 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 25999533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 26122911 - 26122959
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||||||||||| |||||||| ||||||| |||||    
T  26122911 tttcataagctgcttatgtcatatttcaataagcctaaattttcagctt 26122959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 32359356 - 32359404
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  32359356 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 32359404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 35226544 - 35226592
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  35226544 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 35226592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 38856190 - 38856238
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  38856190 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 38856238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 42307996 - 42307948
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  42307996 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 42307948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 44609424 - 44609376
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  44609424 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 44609376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 50529026 - 50529074
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  50529026 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 50529074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 12916003 - 12916036
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagc 34  Q
    |||||||||||||||||||||||||| |||||||    
T  12916003 tttcataaactgcttatgtcatatttaaataagc 12916036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 38934042 - 38934083
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattt 42  Q
    |||||||| |||||||||||||||||||||||| | ||||||    
T  38934042 tttcataagctgcttatgtcatattttaataagtctaaattt 38934083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 32244217 - 32244265
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||  ||||||| |||||    
T  32244217 tttcataagctgcttatgccatattttaataagcttaaattttcagctt 32244265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 48925094 - 48925046
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||| |||||||||||||||||||| | ||||||| |||||    
T  48925094 tttcataagctgtttatgtcatattttaataagtctaaatttttagctt 48925046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 22101252 - 22101210
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaatttt 43  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  22101252 tttcataagctgcttatgtcatattttaataagcccaaatttt 22101210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 5733499 - 5733547
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  5733499 tttcataagctgcttatgtcatattttaataagcctaaattttcagctt 5733547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 28329942 - 28329894
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||||||||||||| |||||||||||||||| ||||||| |||||    
T  28329942 tttcataaactgcttatgccatattttaataagcctaaattttcagctt 28329894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 30270784 - 30270736
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  30270784 tttcataagctgcttatgtcatattttaataagcctaaattttcagctt 30270736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 31517320 - 31517272
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||||||||||||| |||||||||||||||| ||||||| |||||    
T  31517320 tttcataaactgcttatgccatattttaataagcctaaattttcagctt 31517272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2178874 - 2178826
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  2178874 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 2178826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3873349 - 3873301
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  3873349 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 3873301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 16066399 - 16066351
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  16066399 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 16066351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 26323291 - 26323243
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  26323291 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 26323243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 33906152 - 33906104
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  33906152 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 33906104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 39635552 - 39635600
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||||||||||||| |||||| ||||||| |||||    
T  39635552 tttcataagctgcttatgtcatattttattaagcctaaattttcagctt 39635600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 42446674 - 42446626
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| ||||||||||||||  ||||||||||||||    
T  42446674 tttcataagctgcttatgccatattttaataagatcaaattttaagctt 42446626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 30420271 - 30420224
Alignment:
Q  2 ttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    ||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  30420271 ttcataagctgcttatgccatattttaataagcctaaattttcagctt 30420224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1483008 - 1482966
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaatttt 43  Q
    |||||||| ||||||||| |||||||||||||||| |||||||    
T  1483008 tttcataagctgcttatgccatattttaataagcctaaatttt 1482966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 19901243 - 19901201
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaatttt 43  Q
    |||||||||||||||||| ||||||| |||||||| |||||||    
T  19901243 tttcataaactgcttatgccatatttcaataagcctaaatttt 19901201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 1108379 - 1108427
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    ||||||||  |||||||| |||||||||||||||| ||||||| |||||    
T  1108379 tttcataagttgcttatgccatattttaataagcctaaattttcagctt 1108427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6174933 - 6174885
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||||||||||| | |||||| ||||||| |||||    
T  6174933 tttcataagctgcttatgtcatatttcattaagcctaaattttcagctt 6174885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 18806989 - 18806941
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||  ||||||||||||||| ||||||| |||||    
T  18806989 tttcataagctgcttatgctatattttaataagcctaaatttttagctt 18806941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 145350 - 145302
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  145350 tttcataagctgcttatgtcatattttaataagcctaaattttcagctt 145302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 36805 - 36853
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  36805 tttcataagctgcttatgtcatattttaataagcctaaattttcagctt 36853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000005; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2042629 - 2042581
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  2042629 tttcataagctgcttatgtcatattttaataagcctaaattttcagctt 2042581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10836860 - 10836812
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||||||||||||| |||||||||||||||| ||||||| |||||    
T  10836860 tttcataaactgcttatgccatattttaataagcctaaattttcagctt 10836812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 18594639 - 18594687
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  18594639 tttcataagctgcttatgtcatattttaataagcctaaattttcagctt 18594687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 24113271 - 24113223
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  24113271 tttcataagctgcttatgtcatattttaataagcctaaattttcagctt 24113223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 35118136 - 35118088
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  35118136 tttcataagctgcttatgtcatattttaataagcctaaattttcagctt 35118088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8021821 - 8021863
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaatttt 43  Q
    |||||||| |||||||||||||||||||||||||| |||||||    
T  8021821 tttcataagctgcttatgtcatattttaataagcctaaatttt 8021863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 44805049 - 44805007
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaatttt 43  Q
    |||||||| |||||||||||||||||||||||||| |||||||    
T  44805049 tttcataagctgcttatgtcatattttaataagcctaaatttt 44805007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 9807363 - 9807404
Alignment:
Q  2 ttcataaactgcttatgtcatattttaataagcccaaatttt 43  Q
    ||||||| |||||||||||||||||||||||||| |||||||    
T  9807363 ttcataagctgcttatgtcatattttaataagcctaaatttt 9807404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 144496 - 144544
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  144496 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 144544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2322117 - 2322069
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||| ||||||||| ||||||| |||||||||||||    
T  2322117 tttcataagctgcttatatcatattttgataagcctaaattttaagctt 2322069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 4035949 - 4035997
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  4035949 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 4035997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14422805 - 14422853
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  14422805 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 14422853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 22260735 - 22260687
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  22260735 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 22260687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 28639384 - 28639432
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  28639384 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 28639432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 29938163 - 29938211
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  29938163 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 29938211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 33278502 - 33278550
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  33278502 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 33278550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 33287130 - 33287082
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  33287130 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 33287082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 34999001 - 34998953
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  34999001 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 34998953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 38167260 - 38167212
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  38167260 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 38167212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 40117957 - 40117909
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||||||||||  ||||||| |||||    
T  40117957 tttcataagctgcttatgtcatattttaataagcttaaattttcagctt 40117909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 41575615 - 41575663
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||||||||||| |||||||| ||||||| |||||    
T  41575615 tttcataagctgcttatgtcatatttcaataagcctaaattttcagctt 41575663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6144378 - 6144330
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||  ||||||| |||||    
T  6144378 tttcataagctgcttatgccatattttaataagcataaattttcagctt 6144330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 7774866 - 7774914
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||||||||||||| |||||  ||||||| |||||    
T  7774866 tttcataagctgcttatgtcatattttattaagcttaaattttcagctt 7774914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 7812097 - 7812145
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||||||||||| |||||||  ||||||| |||||    
T  7812097 tttcataagctgcttatgtcatatttcaataagcttaaattttcagctt 7812145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 13110510 - 13110554
Alignment:
Q  5 ataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||| ||||||||| |||||||||||||||| ||||||| |||||    
T  13110510 ataagctgcttatgccatattttaataagcctaaattttcagctt 13110554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 34679562 - 34679514
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||  |||||||||||||||| ||||||| |||||    
T  34679562 tttcataagctgcttataccatattttaataagcctaaattttcagctt 34679514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 39206688 - 39206736
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||| | ||||||| |||||    
T  39206688 tttcataagctgcttatgccatattttaataagtctaaattttcagctt 39206736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000005; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 52938 - 52986
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  52938 tttcataagctgcttatgtcatattttaataagcctaaattttcagctt 52986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 53010 - 53058
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  53010 tttcataagctgcttatgtcatattttaataagcctaaattttcagctt 53058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3347628 - 3347580
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  3347628 tttcataagctgcttatgtcatattttaataagcctaaattttcagctt 3347580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6086704 - 6086656
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  6086704 tttcataagctgcttatgtcatattttaataagcctaaattttcagctt 6086656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 11167342 - 11167390
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  11167342 tttcataagctgcttatgtcatattttaataagcctaaattttcagctt 11167390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 26946981 - 26946933
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  26946981 tttcataagctgcttatgtcatattttaataagcctaaattttcagctt 26946933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 18613643 - 18613688
Alignment:
Q  4 cataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    ||||| |||||||||||||||||||||||||| ||||||| |||||    
T  18613643 cataagctgcttatgtcatattttaataagcctaaattttcagctt 18613688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 1153695 - 1153743
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  1153695 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 1153743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3955871 - 3955823
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    ||||||||||||||||||  ||||||||||||||| ||||||| |||||    
T  3955871 tttcataaactgcttatgctatattttaataagcctaaattttcagctt 3955823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 9459665 - 9459713
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  9459665 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 9459713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 20726889 - 20726937
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  20726889 tttcataagctgcttatgccatattttaataagcctaaatttttagctt 20726937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 26704444 - 26704396
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  26704444 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 26704396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 30691953 - 30692001
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  30691953 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 30692001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 33464431 - 33464479
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  33464431 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 33464479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 16307113 - 16307065
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||  ||||||| |||||    
T  16307113 tttcataagctgcttatgccatattttaataagcataaattttcagctt 16307065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17261178 - 17261130
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||  ||||||||||||||| ||||||| |||||    
T  17261178 tttcataagctgcttatgctatattttaataagcctaaattttcagctt 17261130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 21893557 - 21893605
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| || |||| |||||    
T  21893557 tttcataagctgcttatgccatattttaataagcctaatttttcagctt 21893605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000005; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 31883247 - 31883295
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  31883247 tttcataagctgcttatgtcatattttaataagcctaaatttttagctt 31883295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 1165706 - 1165658
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    ||||||||  ||||||||||||||||||||||||| ||||||| |||||    
T  1165706 tttcataagttgcttatgtcatattttaataagcctaaattttcagctt 1165658  T

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Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 1579139 - 1579187
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  1579139 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 1579187  T

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Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 1605676 - 1605628
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  1605676 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 1605628  T

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Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3386591 - 3386543
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  3386591 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 3386543  T

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Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 3921684 - 3921732
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  3921684 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 3921732  T

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Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 4121040 - 4121088
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  4121040 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 4121088  T

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Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8374443 - 8374395
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  8374443 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 8374395  T

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Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 9008162 - 9008114
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  9008162 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 9008114  T

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Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 16069456 - 16069504
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  16069456 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 16069504  T

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Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 16737552 - 16737504
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  16737552 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 16737504  T

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Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 24105776 - 24105736
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaatt 41  Q
    |||||||| |||||||||||||||||||||||||| |||||    
T  24105776 tttcataagctgcttatgtcatattttaataagcctaaatt 24105736  T

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Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 27420961 - 27421009
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  27420961 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 27421009  T

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Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 27679274 - 27679226
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  27679274 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 27679226  T

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Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 38598555 - 38598507
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  38598555 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 38598507  T

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Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 26603047 - 26603014
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagc 34  Q
    |||||||||||||||||| |||||||||||||||    
T  26603047 tttcataaactgcttatgccatattttaataagc 26603014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20992251 - 20992203
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||| ||||| |||||||||||||||| ||||||| |||||    
T  20992251 tttcataagctgattatgccatattttaataagcctaaattttcagctt 20992203  T

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Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 27025059 - 27025107
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| ||| |||||||||||| ||||||| |||||    
T  27025059 tttcataagctgcttatgccattttttaataagcctaaattttcagctt 27025107  T

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Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 33491301 - 33491253
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| |||||| || |||||||||||||||| ||||||| |||||    
T  33491301 tttcataagctgcttttgccatattttaataagcctaaattttcagctt 33491253  T

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Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 33991243 - 33991291
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    ||||||||  |||||||| |||||||||||||||| ||||||| |||||    
T  33991243 tttcataagttgcttatgccatattttaataagcctaaattttcagctt 33991291  T

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Target: scaffold0920 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0920
Description:

Target: scaffold0920; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 3810 - 3858
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  3810 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 3858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 23056 - 23008
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  23056 tttcataagctgcttatgccatattttaataagcctaaattttcagctt 23008  T

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Target: scaffold1777 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1777
Description:

Target: scaffold1777; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 111 - 63
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||| ||||||||||||| || ||||||| |||||    
T  111 tttcataagctgcttatgccatattttaataatcctaaattttcagctt 63  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10338 - 10386
Alignment:
Q  1 tttcataaactgcttatgtcatattttaataagcccaaattttaagctt 49  Q
    |||||||| ||||||||  |||||||||||||||| ||||||| |||||    
T  10338 tttcataagctgcttataccatattttaataagcctaaattttcagctt 10386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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