View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16566_low_41 (Length: 303)
Name: NF16566_low_41
Description: NF16566
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16566_low_41 |
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Alignment Details
Target: chr8 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 10 - 285
Target Start/End: Complemental strand, 32649597 - 32649322
Alignment:
| Q |
10 |
aagaatatcaacataaaatggttggatattatagacgaggggtccataacccataattatgcattttctatgttccaaaatcccccattaagcatgagaa |
109 |
Q |
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| T |
32649597 |
aagaatatcaacataaaatggttggatattatagacgaggggtccataacccataattatgcattttctatgttccaaaatcccccattaagcatgagaa |
32649498 |
T |
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| Q |
110 |
tgttaggcgatctgctcccacatacaaaaaccacgtgtttcccttagatgtgatgaaccttaagtgacaatttgcacgcttaatttggataattcaattg |
209 |
Q |
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| T |
32649497 |
tattaggcgatctgctcccacatacaaaaaccacgtgtttcccttagatgtgatgaaccttaagtgacaatttgcacgcttaatttggataattcaattg |
32649398 |
T |
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| Q |
210 |
gtattgcttgatgatcctaatcagacaatatcatctattcataaaattcttgtttacactattaattggtgagtaa |
285 |
Q |
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||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
32649397 |
gtattgcttgatggtcctaatcagacaatatcatctattcataaaattcttgtttacactattaattggggagtaa |
32649322 |
T |
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