View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16566_low_46 (Length: 285)
Name: NF16566_low_46
Description: NF16566
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16566_low_46 |
 | |
|
| [»] scaffold0277 (2 HSPs) |
| | |
|
| [»] scaffold0349 (1 HSPs) |
| | |
|
| [»] scaffold0419 (1 HSPs) |
| | |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0277 (Bit Score: 235; Significance: 1e-130; HSPs: 2)
Name: scaffold0277
Description:
Target: scaffold0277; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 4121 - 3855
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
4121 |
cttggaaaagcaatttataattttattgctgatgaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatc |
4022 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4021 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagttaggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
3922 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttgatgatatcgagcaactacaggctttggctggagaacctgat |
267 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
3921 |
gattcttttgattctcgatgatgttgacgatatggagcaactacaggctttggcaggagaacctgat |
3855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277; HSP #2
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 13084 - 12818
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
13084 |
cttggaaaagcaatttataattttatttctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatc |
12985 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| ||| |||||| ||| ||||||||||||||||| || |||||||||||||||||||| ||||||| |
|
|
| T |
12984 |
tccaggaggaactccttttaaaaacacttcaacagaaaactaagttaggaagtgttagtgagggaattccttatataaaggaaaggctgcatacaaagaa |
12885 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttgatgatatcgagcaactacaggctttggctggagaacctgat |
267 |
Q |
| |
|
|| |||||||||||||||||||||||| ||||| |||||||||| |||||||| |||| ||||||| |
|
|
| T |
12884 |
gactcttttgattctcgatgatgttgacgatatgaagcaactacatgctttggcaggaggacctgat |
12818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 235; Significance: 1e-130; HSPs: 41)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 27604113 - 27603847
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
27604113 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatc |
27604014 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
27604013 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagttaggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaatgaa |
27603914 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttgatgatatcgagcaactacaggctttggctggagaacctgat |
267 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| | |||||||||||||||||| |||||||||||| |
|
|
| T |
27603913 |
gattcttttgattctcgatgatgttgacgatatggggcaactacaggctttggcaggagaacctgat |
27603847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 27610529 - 27610263
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||| |
|
|
| T |
27610529 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcaacttcaaataaattgaaacatc |
27610430 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||| |||||| |
|
|
| T |
27610429 |
ttcaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaattccttatataaaggaaaggctacatagaaagaa |
27610330 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttgatgatatcgagcaactacaggctttggctggagaacctgat |
267 |
Q |
| |
|
| ||||||||||||| ||||||||||| |||| |||||||||| ||||||||||||| ||||||| |
|
|
| T |
27610329 |
ggttcttttgattcttgatgatgttgacaatatgaagcaactacatgctttggctggaggacctgat |
27610263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 27717908 - 27717642
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||| |
|
|
| T |
27717908 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcaacttcaaataaattgaaacatc |
27717809 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||| |||||| |
|
|
| T |
27717808 |
ttcagaaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaattccttatataaaggaaaggctacatagaaagaa |
27717709 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttgatgatatcgagcaactacaggctttggctggagaacctgat |
267 |
Q |
| |
|
| ||||||||||||| ||||||||||| |||| |||||||||| ||||||||||||| ||||||| |
|
|
| T |
27717708 |
ggttcttttgattcttgatgatgttgacaatatgaagcaactacatgctttggctggaggacctgat |
27717642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 28787011 - 28787277
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
28787011 |
cttggaaaagcaatttataattttatttctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatc |
28787110 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| || |||||||||||||||||||| ||||||| |
|
|
| T |
28787111 |
tccaggaggtgctccttttaaaaacacttcaactgaaaattaagttaggaggtgttagtgagggaattccttatataaaggaaaggctgcatacaaagaa |
28787210 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttgatgatatcgagcaactacaggctttggctggagaacctgat |
267 |
Q |
| |
|
|| |||||||||||||||||||||||| ||||| |||||||||| |||||||| |||| ||||||| |
|
|
| T |
28787211 |
gactcttttgattctcgatgatgttgacgatatgaagcaactacatgctttggcaggaggacctgat |
28787277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 28781874 - 28782140
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
|||| ||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
28781874 |
cttgtaaaagcagtttataacttaattgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatc |
28781973 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||| || |||||||||||||||||||| ||||||| |
|
|
| T |
28781974 |
tccaggaggagctccttttaaaagcacttcaactgaaaattaagttaggaggtgttagtgagggaattccttatataaaggaaaggctgcatacaaagaa |
28782073 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttgatgatatcgagcaactacaggctttggctggagaacctgat |
267 |
Q |
| |
|
|| |||||||||||||||||||||||| ||||| ||||||||||| |||||||| |||| ||||||| |
|
|
| T |
28782074 |
gactcttttgattctcgatgatgttgacgatatggagcaactacatgctttggcaggaggacctgat |
28782140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 28793132 - 28793398
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| | ||||||||| |
|
|
| T |
28793132 |
cttggaaaagcaatttataattttatttctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagagttcagcttcaaatagattgaaacatc |
28793231 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| || |||||||||||||||| ||| ||||||| |
|
|
| T |
28793232 |
tccaggaggtgctccttttaaaaacacttcaactgaaaattaagttaggaggtgttagtgagggaattccttatataaaggaaaggctacatacaaagaa |
28793331 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttgatgatatcgagcaactacaggctttggctggagaacctgat |
267 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| |||||||||| |||||||| |||| ||||||| |
|
|
| T |
28793332 |
gattcttttgattctcgatgatgttgacgatatgaagcaactacatgctttggcaggaggacctgat |
28793398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 27677029 - 27676803
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||| ||||| ||| |
|
|
| T |
27677029 |
cttgcgaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgtgaaagagagttcagcttcaaataacttgaaaaatc |
27676930 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||| || |||||| || | |||||||||||||| ||| |||||| |
|
|
| T |
27676929 |
tccagcaggagctccttttaaaaacacttcaacttgaaattaagttaggaagtgttagcgaaggaattcctaaaataaaggaaaggctacatggaaagaa |
27676830 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttga |
227 |
Q |
| |
|
||||||||||||||| ||||||||||| |
|
|
| T |
27676829 |
gattcttttgattcttgatgatgttga |
27676803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 27592430 - 27592204
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||| ||||| ||| |
|
|
| T |
27592430 |
cttgcgaaagcaatttataactttattgctgatcaatttgaatgctcatgttttcttgaaaatgtgaaagagagttcagcttcaaataacttgaaaaatc |
27592331 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||| || |||||| || | |||||||||||||| ||| |||||| |
|
|
| T |
27592330 |
tccagcaggagctccttttaaaaacacttcaacttgaaattaagttaggaagtgttagcgaaggaattcctaaaataaaggaaaggctacatggaaagaa |
27592231 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttga |
227 |
Q |
| |
|
||||||||||||||| ||||||||||| |
|
|
| T |
27592230 |
gattcttttgattcttgatgatgttga |
27592204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 26884843 - 26885101
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
|||||||||||||||||||||| | ||||||||||||||||||| ||||||||| | || || || ||||||||| || ||||| ||||||||| |
|
|
| T |
26884843 |
cttgcaaaagcaatttataattatgttgctgatcaatttgaatgtgtatgttttctgcataaagtcagggagaattcaactcataataacttgaaacatc |
26884942 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
|||||||||| ||||||||||||||| || || | | |||||||| |||| |||||||||||||||| | | ||||||||||| || ||| |||||| |
|
|
| T |
26884943 |
tccaggaggaactccttttaaaaacaattaaattaaacattaagttaggagatgttagtgagggaattccactcataaaggaaagactacatagaaagaa |
26885042 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttgatgatatcgagcaactacaggctttggctggag |
259 |
Q |
| |
|
||||||||||||||| ||||||||||| | || ||||| ||| ||||||||||||||| |
|
|
| T |
26885043 |
gattcttttgattcttgatgatgttgacaaaatggagcagctagaggctttggctggag |
26885101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 27427021 - 27426763
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||||| |||||| ||||||||| ||||||||||||||||| | | ||||||||||||| | || |||||||||||||||||||||| |||||| | |
|
|
| T |
27427021 |
cttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttgaacaagtcagagagaattcagcttcaaatagcttgaaacgtt |
27426922 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
|||||||| |||||||| ||| ||||||||||| |||||||||| | || ||| ||||||||||| || |||||||||||| || | |||||| |
|
|
| T |
27426921 |
tccaggagatgctcctttcaaagacacttcaactgaaaattaagttagcagatgtcagtgagggaatctcaatcataaaggaaaggttgtgtagaaagaa |
27426822 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttgatgatatcgagcaactacaggctttggctggag |
259 |
Q |
| |
|
||||||||||||||||||||| ||||| |||| ||||||| | ||||||||||||| |
|
|
| T |
27426821 |
gattcttttgattctcgatgacgttgacaatatgaagcaactgaatgctttggctggag |
27426763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 26862353 - 26862579
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||||||||| | |||||||||| | || ||||||||||||||| || |||| ||||||||| |
|
|
| T |
26862353 |
cttgcaaaagcaatttataattttgttgccgatcaatttgaaggtgtatgttttcttcataaagttagagagaattcaactcataatagcttgaaacatc |
26862452 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaa-attaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaaga |
199 |
Q |
| |
|
||||| ||||||| |||||||||||| || || ||||| |||||||| |||| || ||||||||||||| | | |||||||||||| || || || || |
|
|
| T |
26862453 |
tccagaaggagcttcttttaaaaacagtt-aaattgaacattaagttaggagatgctagtgagggaattccacttataaaggaaagactaaatagaatga |
26862551 |
T |
|
| Q |
200 |
agattcttttgattctcgatgatgttga |
227 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
26862552 |
agattcttttgattctcgatgatgttga |
26862579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 26656738 - 26656964
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||| |||||||||||||||||| | ||||||||||||||| | |||||||||| | ||||| ||||||||||||||| ||||| ||||||||| |
|
|
| T |
26656738 |
cttgccaaagcaatttataattttgtcgctgatcaatttgaaggtgtatgttttcttcacaatgtcagagagaattcagctcataataatttgaaacatc |
26656837 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
|||||||||||||||||| |||||| || | | | |||||||| |||| |||||||||||||||| | ||||||||||| || | |||||| |
|
|
| T |
26656838 |
tccaggaggagctcctttcaaaaactgttagagtgaatattaagttaggagatgttagtgagggaattccaatcataaaggaaagactatctagaaagaa |
26656937 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttga |
227 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
26656938 |
gattcttttgattctcgatgatgttga |
26656964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 26762709 - 26762935
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||| |||||||||||||||||| | ||||||||||||||| | |||||||||| | ||||| ||||||||||||||| ||||| ||||||||| |
|
|
| T |
26762709 |
cttgccaaagcaatttataattttgtcgctgatcaatttgaaggtgtatgttttcttcacaatgtcagagagaattcagctcataataatttgaaacatc |
26762808 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
|||||||||||||||||| |||||| || | | | |||||||| |||| |||||||||||||||| | ||||||||||| || | |||||| |
|
|
| T |
26762809 |
tccaggaggagctcctttcaaaaactgttagagtgaatattaagttaggagatgttagtgagggaattccaatcataaaggaaagactatctagaaagaa |
26762908 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttga |
227 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
26762909 |
gattcttttgattctcgatgatgttga |
26762935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 26803219 - 26803485
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||||| |||||| ||||||||| ||||||||||||||||| | | |||||||||| | |||| ||||||||||||||| |||||| ||||||||| |
|
|
| T |
26803219 |
cttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatc |
26803318 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
|||| ||| |||| ||| |||||||| | | | |||| ||||| | |||| ||||||| ||| | |||||||||||| ||| | ||| || |
|
|
| T |
26803319 |
tccaagagaagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataa |
26803418 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttgatgatatcgagcaactacaggctttggctggagaacctgat |
267 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||| ||||||| |
|
|
| T |
26803419 |
gattcttttgattctcgatgatgttgacgatatggagcaactacatgctttggctggaggacctgat |
26803485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 27337504 - 27337278
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||| | ||| |||||| | ||||||||||||||||||||| || || ||||||||| |
|
|
| T |
27337504 |
cttgcaaaagcaatttataatttcattgctgatcaatttgaaggagtatgctttcttcataatgttagagagaattcagctcgtaaaaacttgaaacatc |
27337405 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
||||| |||||||||||| ||||||| ||||||| | |||||||| ||| |||| |||||||||| | || ||||||||||| | ||||| |
|
|
| T |
27337404 |
tccagaaggagctcctttcaaaaacagttcaactgaacattaagttaagagatgtttctgagggaattccaatcattaaggaaaggctatgtaggaagaa |
27337305 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttga |
227 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
27337304 |
gattcttttgattctcgatgatgttga |
27337278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 27398244 - 27398018
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||| | ||| |||||| | ||||||||||||||||||||| || || ||||||||| |
|
|
| T |
27398244 |
cttgcaaaagcaatttataatttcattgctgatcaatttgaaggagtatgctttcttcataatgttagagagaattcagctcgtaaaaacttgaaacatc |
27398145 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
||||| |||||||||||| ||||||| ||||||| | |||||||| ||| |||| |||||||||| | || ||||||||||| | ||||| |
|
|
| T |
27398144 |
tccagaaggagctcctttcaaaaacagttcaactgaacattaagttaagagatgtttctgagggaattccaatcattaaggaaaggctatgtaggaagaa |
27398045 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttga |
227 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
27398044 |
gattcttttgattctcgatgatgttga |
27398018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 27530710 - 27530484
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||| | ||||||||| |||||||| |||| |||||| ||||| |||| ||||||||| |
|
|
| T |
27530710 |
cttgcaaaagcaatttataatttcattgctgatcaatttgaagttttatgttttctagaaaatgtgagagtgaattcgacttcagataacttgaaacatc |
27530611 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
|||| ||| | ||||||||||||||| || | | || |||||||| |||||||||||| |||||||| | || ||| ||||||| | |||||| |
|
|
| T |
27530610 |
tccaagagaaactccttttaaaaacagttagattggacattaagttaggaggtgttagtcagggaattccaatcattaagcaaaggctatgtagaaagaa |
27530511 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttga |
227 |
Q |
| |
|
||||||||||||||| ||||||||||| |
|
|
| T |
27530510 |
gattcttttgattcttgatgatgttga |
27530484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 31285332 - 31285590
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||||| |||||| ||||||||||||| |||||||||||| | | |||||||||| | |||| ||||||||||||||| |||||| ||||||||| |
|
|
| T |
31285332 |
cttgcaagagcaatctataattttattggtgatcaatttgacggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatc |
31285431 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
|||| ||| |||||||||| |||||| || | | ||||||||||| | |||||||||||||||| | || ||||||||||| | |||||| |
|
|
| T |
31285432 |
tccaagagaagctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaa |
31285531 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttgatgatatcgagcaactacaggctttggctggag |
259 |
Q |
| |
|
||||||||||||||||||||||||||| |||| | ||||| || ||||||||||||| |
|
|
| T |
31285532 |
gattcttttgattctcgatgatgttgacaatatgaatcaactgcatgctttggctggag |
31285590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 26647252 - 26647476
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||| ||||| |||||||||||| ||||||||||||||||| | ||| |||||| | ||||| ||||||||||||||| ||||| ||||||||| |
|
|
| T |
26647252 |
cttgccaaagcgatttataattttgttgctgatcaatttgaaggtgtatgctttcttcataatgtcagagagaattcagctcataataacttgaaacatc |
26647351 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
||||| |||||||||||| ||||||| || || | | |||||||||||| | || ||||||||||| | || ||||||||||| | |||||| |
|
|
| T |
26647352 |
tccagaaggagctcctttcaaaaacagttaaagtgaacattaagtttggacatatttgtgagggaattccaatcattaaggaaaggctatgtagaaagaa |
26647451 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgtt |
225 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
26647452 |
gattcttttgattctcgatgatgtt |
26647476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 26753220 - 26753444
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||| ||||| |||||||||||| ||||||||||||||||| | ||| |||||| | ||||| ||||||||||||||| ||||| ||||||||| |
|
|
| T |
26753220 |
cttgccaaagcgatttataattttgttgctgatcaatttgaaggtgtatgctttcttcataatgtcagagagaattcagctcataataacttgaaacatc |
26753319 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
||||| |||||||||||| ||||||| || || | | |||||||||||| | || ||||||||||| | || ||||||||||| | |||||| |
|
|
| T |
26753320 |
tccagaaggagctcctttcaaaaacagttaaagtgaacattaagtttggacatatttgtgagggaattccaatcattaaggaaaggctatgtagaaagaa |
26753419 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgtt |
225 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
26753420 |
gattcttttgattctcgatgatgtt |
26753444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 26143641 - 26143899
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||||||||| | |||||||||| | ||||| |||||||||||| | ||||| ||||||||| |
|
|
| T |
26143641 |
cttgcaaaagcagtttataattttgttgctgatcaatttgaaggtgtatgttttcttcataatgtcagagagaattcaagtcataataacctgaaacatc |
26143740 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaa-attaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaaga |
199 |
Q |
| |
|
||||||| || |||||||||| |||| || || ||||| |||||| |||| |||||||||||||||||| || |||||||| || | ||||| |
|
|
| T |
26143741 |
tccaggaagatctccttttaagaacagtt-aaattgaaccataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaaga |
26143839 |
T |
|
| Q |
200 |
agattcttttgattctcgatgatgttgatgatatcgagcaactacaggctttggctggag |
259 |
Q |
| |
|
|||||||||||||||| ||||||||||| | | ||||| ||| ||||||||||||||| |
|
|
| T |
26143840 |
agattcttttgattcttgatgatgttgacaaactggagcagctagaggctttggctggag |
26143899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 26624044 - 26624267
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||||| |||||| ||||| ||| ||||||||||||||||| | | |||||||||| | |||| ||||||||||||||| |||||| ||||||||| |
|
|
| T |
26624044 |
cttgcaagagcaatctataactttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatc |
26624143 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
|||| ||| |||||||||| |||||| | | | ||||||||||| | |||||||||||||||||| || ||||||||||| | |||||| |
|
|
| T |
26624144 |
tccaagagaagctcctttttaaaacaactggattggaaattaagttggaccatgttagtgagggaatttcaatcattaaggaaaggctatgtagaaagaa |
26624243 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgt |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
26624244 |
gattcttttgattctcgatgatgt |
26624267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 26730021 - 26730244
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||||| |||||| ||||| ||| ||||||||||||||||| | | |||||||||| | |||| ||||||||||||||| |||||| ||||||||| |
|
|
| T |
26730021 |
cttgcaagagcaatctataactttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatc |
26730120 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
|||| ||| |||||||||| |||||| | | | ||||||||||| | |||||||||||||||||| || ||||||||||| | |||||| |
|
|
| T |
26730121 |
tccaagagaagctcctttttaaaacaactggattggaaattaagttggaccatgttagtgagggaatttcaatcattaaggaaaggctatgtagaaagaa |
26730220 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgt |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
26730221 |
gattcttttgattctcgatgatgt |
26730244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 27705813 - 27705557
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||||| |||||||||||||||| ||||||||||||||||| | | |||||||||| | |||| ||||||||||||||| |||| | ||||||||| |
|
|
| T |
27705813 |
cttgcaagagcaatttataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaatgacttgaaacatc |
27705714 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
|||| ||| |||| ||| |||||||| | | |||| ||||| | |||| ||||||| ||| | ||||||||||||||| | |||||| |
|
|
| T |
27705713 |
tccaagagaagcttcttctaaaaacaactggatcgaaaataaagttagatcatgtttgtgaggggattccattcataaaggaaaggctgtgtagaaagaa |
27705614 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttgatgatatcgagcaactacaggctttggctgg |
257 |
Q |
| |
|
||||||||||||||||||||||||||| |||| ||||||| || ||||||||||| |
|
|
| T |
27705613 |
gattcttttgattctcgatgatgttgacgataggaagcaactgcatgctttggctgg |
27705557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 259
Target Start/End: Original strand, 27679738 - 27679981
Alignment:
| Q |
16 |
tataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatctccaggaggagctcc |
115 |
Q |
| |
|
||||||||| |||| |||||||| ||| | |||||||||||| | |||| ||||||||||||||| |||||| ||||| ||||||| ||| |||||| |
|
|
| T |
27679738 |
tataattttgttgcagatcaattcgaaggttcatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaatatctccaagagaagctcc |
27679837 |
T |
|
| Q |
116 |
ttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaagattcttttgattct |
215 |
Q |
| |
|
||||||||||| | ||||||||||| | |||||||||||||||| | ||||||||||| | | ||||||||||||||||||||| |
|
|
| T |
27679838 |
ttttaaaaacaacaggtttggaaattaagttagaccatgttagtgagggaattccagtcataaaggaaagattatgtagaaagaagattcttttgattct |
27679937 |
T |
|
| Q |
216 |
cgatgatgttgatgatatcgagcaactacaggctttggctggag |
259 |
Q |
| |
|
|||||||||||| || | ||||||| || ||||||||||||| |
|
|
| T |
27679938 |
cgatgatgttgacaatttgaagcaactgcatgctttggctggag |
27679981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 25511665 - 25511923
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
|||||||||||| ||| ||||| ||||||||||||||||||| | |||||||||| | ||||| |||||||||||| || || || ||||||||| |
|
|
| T |
25511665 |
cttgcaaaagcagtttttaattctattgctgatcaatttgaaagtgtatgttttcttcataatgtcagagagaattcaactcttaagaacttgaaacatc |
25511764 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
||||| || ||||||||| ||||| | || || |||| | || | | || ||||||||||||||| | |||||||||||| || | |||||| |
|
|
| T |
25511765 |
tccagaagaagctcctttcaaaaatagttaaatttgacggtcagatagaagatgttagtgagggaataccaattataaaggaaagactatctagaaagaa |
25511864 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttgatgatatcgagcaactacaggctttggctggag |
259 |
Q |
| |
|
||||||||||||||| || |||||||| | | ||||| ||| ||||||||||||||| |
|
|
| T |
25511865 |
gattcttttgattcttgacgatgttgacaaactggagcagctagaggctttggctggag |
25511923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 25539316 - 25539574
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
|||||||||||| ||| ||||||| ||||||||||||||||| |||||||||| | ||||| |||||||||||| | ||||| ||||||||| |
|
|
| T |
25539316 |
cttgcaaaagcagtttttaattttgttgctgatcaatttgaagttgtatgttttcttcataatgtcagagagaattcaagtcataataacttgaaacatc |
25539415 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
|||| || ||||||||| ||||| | || || |||| |||||| | || ||||||||||||||| | ||||||||||| || | |||||| |
|
|
| T |
25539416 |
tccaaaagaagctcctttcaaaaatagttaaatttgacggtaagttagaagatgttagtgagggaataacaatcataaaggaaagactatctaaaaagaa |
25539515 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttgatgatatcgagcaactacaggctttggctggag |
259 |
Q |
| |
|
||||||||||||||| ||||||||||| | | ||||| ||| ||||||||||||||| |
|
|
| T |
25539516 |
gattcttttgattcttgatgatgttgacaaactagagcagctagaggctttggctggag |
25539574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 26056695 - 26056921
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
|||||||||||| ||| ||||| ||||||||||||||||||| | |||||||||| | ||||| |||||||||||| || || || ||||||||| |
|
|
| T |
26056695 |
cttgcaaaagcagtttttaattctattgctgatcaatttgaaggtgtatgttttcttcataatgtcagagagaattcaactcttaagaacttgaaacatc |
26056794 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
||||| || ||||||||| ||||| | || || |||| | |||| | || ||||||||||||||| | |||||||||||| || | |||||| |
|
|
| T |
26056795 |
tccagaagaagctcctttcaaaaatagttaaatttgacggtcagttagaagatgttagtgagggaataccaattataaaggaaagactatctagaaagaa |
26056894 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttga |
227 |
Q |
| |
|
||||||||||||||| || |||||||| |
|
|
| T |
26056895 |
gattcttttgattcttgacgatgttga |
26056921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 27215225 - 27215483
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
|||||||||||||||| |||||| ||||||||||| |||||| | |||| |||||| ||| |||| | |||||||||| ||| |||||| ||||||| | |
|
|
| T |
27215225 |
cttgcaaaagcaatttttaatttcattgctgatcagtttgaaggttcatattttctagaagatgtgaaagagaattcaactttaaataacttgaaacacc |
27215324 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
| ||||| || ||||| | ||||| || | | || |||||| ||||||||||||||||| ||| | | ||||| ||| ||| | |||||| |
|
|
| T |
27215325 |
tgcaggaaaagatccttatgaaaacggttagattagacgataagttaggaggtgttagtgaggggattacaaagataaaaaaaatgctatgtcaaaagaa |
27215424 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttgatgatatcgagcaactacaggctttggctggag |
259 |
Q |
| |
|
||||||||||||||| ||||||||||| | | ||||| ||| ||||||||||||||| |
|
|
| T |
27215425 |
gattcttttgattcttgatgatgttgacaaactagagcagctagaggctttggctggag |
27215483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 25483832 - 25484090
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
|||||||||||| ||| ||||||| ||||||||||||||||| | |||||||||| | ||||| |||||||||||| | ||||| ||||||||| |
|
|
| T |
25483832 |
cttgcaaaagcagtttttaattttcttgctgatcaatttgaaggtgtatgttttcttcataatgtcagagagaattcaagtcataataacctgaaacatc |
25483931 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
|||| || |||||||| ||||| | || || |||| |||||| | || ||||||||||||||| | ||||||||||| || | |||||| |
|
|
| T |
25483932 |
tccaaaagatgctcctttcaaaaatagttaaatttgacggtaagttagaagatgttagtgagggaataccaatcataaaggaaagactatctagaaagaa |
25484031 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttgatgatatcgagcaactacaggctttggctggag |
259 |
Q |
| |
|
||||||||||||| | ||||||||||| | | ||||| ||| ||||||||||||||| |
|
|
| T |
25484032 |
gattcttttgattgttgatgatgttgacaaactggagcagctagaggctttggctggag |
25484090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 25580495 - 25580753
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||||||||| | |||||||||| | ||||| ||||||| |||| | ||||| ||||||||| |
|
|
| T |
25580495 |
cttgcaaaagcagtttataattttgttgctgatcaatttgaaggtgtatgttttcttcataatgtcagagagatttcaattcttaataacttgaaacatc |
25580594 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
|||| | | |||||||||| || | || || || | ||||||| | || |||||||||||||||||| || |||||||| || | |||||| |
|
|
| T |
25580595 |
tccattattatctccttttaataatagttaaattttactttaagttagtagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaa |
25580694 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttgatgatatcgagcaactacaggctttggctggag |
259 |
Q |
| |
|
||||||||||||| | ||||||||||| | | ||||| ||| ||||||||||||||| |
|
|
| T |
25580695 |
gattcttttgatttttgatgatgttgacaaactggagcagctagaggctttggctggag |
25580753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 26076665 - 26076891
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
|||||||||||| ||| ||||| ||||||||||||||||||| | |||||||||| | ||||| |||||||||||| || || || ||||||||| |
|
|
| T |
26076665 |
cttgcaaaagcagtttttaattctattgctgatcaatttgaaggtgtatgttttcttcataatgtcagagagaattcaactcttaagaacttgaaacatc |
26076764 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
||||| || ||||||||| ||||| | || || |||| | || | | || ||||||||||||||| | |||||||||||| || | |||||| |
|
|
| T |
26076765 |
tccagaagaagctcctttcaaaaatagttaaatttgacggtcagatagaagatgttagtgagggaataccaattataaaggaaagactatctagaaagaa |
26076864 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttga |
227 |
Q |
| |
|
||||||||||||||| || |||||||| |
|
|
| T |
26076865 |
gattcttttgattcttgacgatgttga |
26076891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 27697995 - 27697737
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||||| |||||| |||||||| ||||||||||||||||| | | |||||||||| | ||||| ||| |||||||||| |||||| || |||||| |
|
|
| T |
27697995 |
cttgcaagagcaatctataatttggttgctgatcaatttgaaggtttatgttttcttcataatgtgagaatgaattcagctaaaaataacttggaacatc |
27697896 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
|||| ||| |||||||||| |||||| | | |||||||| || | ||||||||| |||||| | || ||||||||||| | |||||| |
|
|
| T |
27697895 |
tccaagagaagctcctttttaaaacaactggatcggaaattaatttagaccatgttagtgacggaattccaatcattaaggaaaggctatgtagaaagaa |
27697796 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttgatgatatcgagcaactacaggctttggctggag |
259 |
Q |
| |
|
|||||||||||||||||| |||||||| | | || || ||||||||||||||||||| |
|
|
| T |
27697795 |
gattcttttgattctcgacgatgttgacaaactggatcagctacaggctttggctggag |
27697737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 28140308 - 28140388
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagct |
81 |
Q |
| |
|
|||||| |||||||||||||||||||||| |||||||||||||| | ||||||||| | ||||| ||||| | ||||||| |
|
|
| T |
28140308 |
cttgcacaagcaatttataattttattgccgatcaatttgaatgtttgtgttttcttcataatgtgagagaaatttcagct |
28140388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 25492728 - 25492622
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||||||| |||| ||||| || |||||||||||||||||| | | ||||||||| | | |||| |||||||||||| || ||| || ||||| ||| |
|
|
| T |
25492728 |
cttgcaaaatcaatctataacttcattgctgatcaatttgaaggtttatgttttctaggagatgtgagagagaattcaactccaagaaacttgaaagatc |
25492629 |
T |
|
| Q |
101 |
tccagga |
107 |
Q |
| |
|
||||||| |
|
|
| T |
25492628 |
tccagga |
25492622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 26824592 - 26824672
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagct |
81 |
Q |
| |
|
||||||||||||| || ||||| |||||||||| |||||||| | ||||||||||| || || ||||||||||||||| |
|
|
| T |
26824592 |
cttgcaaaagcaacttttaattctattgctgataaatttgaagttttttgttttcttgagaacgtgagagagaattcagct |
26824672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 26950523 - 26950594
Alignment:
| Q |
8 |
aagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcag |
79 |
Q |
| |
|
||||| ||||||| || |||||| |||||||||||||| |||||||||| | ||||| ||||| ||||||| |
|
|
| T |
26950523 |
aagcagtttataacttgattgctaatcaatttgaatgcaaatgttttcttcacaatgtgagagaaaattcag |
26950594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Complemental strand, 25492532 - 25492502
Alignment:
| Q |
197 |
agaagattcttttgattctcgatgatgttga |
227 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
25492532 |
agaagattcttttgattctcgatgatgttga |
25492502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 25074647 - 25074683
Alignment:
| Q |
8 |
aagcaatttataattttattgctgatcaatttgaatg |
44 |
Q |
| |
|
|||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
25074647 |
aagcaatttataatttgattgctaatcaatttgaatg |
25074683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 29674476 - 29674432
Alignment:
| Q |
33 |
tcaatttgaatgctcatgttttcttgaaaatgttagagagaattc |
77 |
Q |
| |
|
|||||||||||| || |||||||||||||| |||||||| ||||| |
|
|
| T |
29674476 |
tcaatttgaatgttcctgttttcttgaaaaagttagagaaaattc |
29674432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 29843388 - 29843340
Alignment:
| Q |
9 |
agcaatttataattttattgctgatcaatttgaatgctcatgttttctt |
57 |
Q |
| |
|
||||||||||||||| ||||||||| |||||||||| | ||||||||| |
|
|
| T |
29843388 |
agcaatttataatttgattgctgataaatttgaatgtttgtgttttctt |
29843340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0349
Description:
Target: scaffold0349; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 2948 - 2682
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
2948 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatc |
2849 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||| |||||| |
|
|
| T |
2848 |
ttcagttggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaattccttatataaaggaaaggctacatagaaagaa |
2749 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttgatgatatcgagcaactacaggctttggctggagaacctgat |
267 |
Q |
| |
|
| ||||||||||||| ||||||||||| |||| |||||||||| ||||||||||||| ||||||| |
|
|
| T |
2748 |
ggttcttttgattcttgatgatgttgacaatatgaagcaactacatgctttggctggaggacctgat |
2682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0419 (Bit Score: 183; Significance: 5e-99; HSPs: 1)
Name: scaffold0419
Description:
Target: scaffold0419; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 8260 - 8526
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
8260 |
cttggaaaagcaatttataattttatttctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatc |
8359 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| ||| |||||| ||| ||||||||||||||||| || |||||||||||||||||||| ||||||| |
|
|
| T |
8360 |
tccaggaggaactccttttaaaaacacttcaacagaaaactaagttaggaagtgttagtgagggaattccttatataaaggaaaggctgcatacaaagaa |
8459 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttgatgatatcgagcaactacaggctttggctggagaacctgat |
267 |
Q |
| |
|
|| |||||||||||||||||||||||| ||||| |||||||||| |||||||| |||| ||||||| |
|
|
| T |
8460 |
gactcttttgattctcgatgatgttgacgatatgaagcaactacatgctttggcaggaggacctgat |
8526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 175; Significance: 3e-94; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 18698805 - 18698547
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||| |
|
|
| T |
18698805 |
cttgcgaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaatcaattgaaacatc |
18698706 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||| |||||||||| ||||||||||||||||||||| || |||||||||||||||||||| ||||||| |
|
|
| T |
18698705 |
tccaggaggaactccttttaaaaacactagcactgaaaattaagttaggaggtgttagtgagggaattccttatataaaggaaaggctgcatacaaagaa |
18698606 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttgatgatatcgagcaactacaggctttggctggag |
259 |
Q |
| |
|
||||||||||||||||||||||||||| || | || ||||| || ||||||||||||| |
|
|
| T |
18698605 |
gattcttttgattctcgatgatgttgacaatttggaacaactgcatgctttggctggag |
18698547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 18678965 - 18678742
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||| |
|
|
| T |
18678965 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaatcaattgaaacatc |
18678866 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||| |||||||||| ||||||||||||||||||||| || |||||||||||||||| ||| ||||||| |
|
|
| T |
18678865 |
tccaggaggaactccttttaaaaacactttcactgaaaattaagttaggaggtgttagtgagggaattccttatataaaggaaaggctacatacaaagaa |
18678766 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgt |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
18678765 |
gattcttttgattctcgatgatgt |
18678742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 18730909 - 18730651
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||| |
|
|
| T |
18730909 |
cttgctaaagtaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaatcaattgaaacatc |
18730810 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||| |||||||||| ||||||||||||||||||||| | |||||||||||||||| ||| ||||||| |
|
|
| T |
18730809 |
tccaggaggaactccttttaaaaacactagcactgaaaattaagttaggaggtgttagtgagggaattccctatataaaggaaaggctacatacaaagaa |
18730710 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttgatgatatcgagcaactacaggctttggctggag |
259 |
Q |
| |
|
||||||||||||||||||||||||||| || | || ||||| || ||||||||||||| |
|
|
| T |
18730709 |
gattcttttgattctcgatgatgttgacaatttggaacaactgcatgctttggctggag |
18730651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 18723490 - 18723224
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| || ||||||||| |
|
|
| T |
18723490 |
cttgcaaaaggaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaacgtgagagagaattcagcttcaaatcaattgaaacatc |
18723391 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||| ||||||| || ||||||||||||||| ||||| || |||||||| ||||||| ||| ||||||| |
|
|
| T |
18723390 |
tccaggaggaactccttttaaaaacactttcactgaaaattaacttaggaggtgttagtgagagaattccttatataaagaaaaggctacatacaaagaa |
18723291 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttgatgatatcgagcaactacaggctttggctggagaacctgat |
267 |
Q |
| |
|
||||||||||||||||||||||||||| || | | ||||| || ||||||||||||| ||||||| |
|
|
| T |
18723290 |
gattcttttgattctcgatgatgttgacaatttgaaacaactgcatgctttggctggaggacctgat |
18723224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 18654882 - 18654659
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| || ||||||||| |
|
|
| T |
18654882 |
cttgcaaaatcaattaataattgtattgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagaaaattcatcttcaaatcaattgaaacatc |
18654783 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||| |||||||||| ||||||||||||||||||||| || |||||||||||||||| ||| ||||||| |
|
|
| T |
18654782 |
tccaggaggaactccttttaaaaacactttcactgaaaattaagttaggaggtgttagtgagggaattccttatataaaggaaaggctacatacaaagaa |
18654683 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgt |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
18654682 |
gattcttttgattctcgatgatgt |
18654659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 18074534 - 18074792
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||||| |||||| ||||||||| ||||||||||||||||| | | ||||||||||||| | || |||||||||||||||||||||| |||||| | |
|
|
| T |
18074534 |
cttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttgaacaagtcagagagaattcagcttcaaatagcttgaaacgtt |
18074633 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
|||||||| |||||||| ||| ||||||||||| |||||||||| | || ||| ||||||||||| || |||||||||||| || | |||||| |
|
|
| T |
18074634 |
tccaggagatgctcctttcaaagacacttcaactgaaaattaagttagcagatgtcagtgagggaatctcaatcataaaggaaaggttgtgtagaaagaa |
18074733 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttgatgatatcgagcaactacaggctttggctggag |
259 |
Q |
| |
|
||||||||||||||||||||| ||||| |||| ||||||| | ||||||||||||| |
|
|
| T |
18074734 |
gattcttttgattctcgatgacgttgacaatatgaagcaactgaatgctttggctggag |
18074792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 60342 - 60600
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||||| |||||| ||||||||| ||||||||||||||||| | | ||||||||||||| | || |||||||||||||||||||||| |||||| | |
|
|
| T |
60342 |
cttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttgaacaagtcagagagaattcagcttcaaatagcttgaaacgtt |
60441 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
|||||||| |||||||| ||| ||||||||||| |||||||||| | || ||| ||||||||||| || |||||||||||| || | |||||| |
|
|
| T |
60442 |
tccaggagatgctcctttcaaagacacttcaactgaaaattaagttagcagatgtcagtgagggaatctcaatcataaaggaaaggttgtgtagaaagaa |
60541 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttgatgatatcgagcaactacaggctttggctggag |
259 |
Q |
| |
|
||||||||||||||||||||| ||||| |||| ||||||| | ||||||||||||| |
|
|
| T |
60542 |
gattcttttgattctcgatgacgttgacaatatgaagcaactgaatgctttggctggag |
60600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 29273247 - 29272989
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||||| |||||| ||||||||| ||||||||||||||||| | |||||||||| | |||| ||||||||||||||| |||||| ||||||||| |
|
|
| T |
29273247 |
cttgcaagagcaatctataatttttttgctgatcaatttgaagatttatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatc |
29273148 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
|||| ||| | ||||||||||||||| | | | ||||||||||| | |||||||||||| ||| | ||||||||| ||||| | |||||| |
|
|
| T |
29273147 |
tccaagagaaactccttttaaaaacaactggattggaaattaagttagatcatgttagtgaggggattccaattataaaggagaggctaagtagaaagaa |
29273048 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttgatgatatcgagcaactacaggctttggctggag |
259 |
Q |
| |
|
||||||||||||||||||||||||||| || | |||||||||| ||||||||||||| |
|
|
| T |
29273047 |
aattcttttgattctcgatgatgttgataatttgaagcaactacatgctttggctggag |
29272989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 28127084 - 28126826
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||| | | ||||||||| ||| |||| ||||||| |||| || || |||| ||||||||| |
|
|
| T |
28127084 |
cttgcaaaagcaatttataatttcattgctgatcaatttgaaggtttatgttttctagaagatgtgagagagatttcaactccatataatttgaaacatc |
28126985 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
|||| || |||||||||| |||||| || | | || |||||||| ||||||||||||||||||||| | ||||| ||||||| |||||| |
|
|
| T |
28126984 |
tccaagaaaagctccttttgaaaacagttggattggacattaagttaggaggtgttagtgagggaattgcaatcataaaacaaaggctatgcagaaagaa |
28126885 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttgatgatatcgagcaactacaggctttggctggag |
259 |
Q |
| |
|
||||||||||||||| |||||||| || | | ||||| ||| ||||||||||||||| |
|
|
| T |
28126884 |
gattcttttgattcttgatgatgtcgacaaactggagcagctagaggctttggctggag |
28126826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 267749 - 267491
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||||| |||||| ||||||||||||||||||||||||||| | | |||||||||| | |||| ||||| ||||||||| || ||| ||||||||| |
|
|
| T |
267749 |
cttgcaagagcaatctataattttattgctgatcaatttgaaggattatgttttcttcatgatgtgagagaaaattcagctataagtaacttgaaacatc |
267650 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
|||| ||| ||||||||||||||||| | | | ||||||||||| | |||||||||||| ||| | || ||||||||||| | |||||| |
|
|
| T |
267649 |
tccaagagaagctccttttaaaaacaactggattggaaattaagttagaccatgttagtgagggcattccaatcattaaggaaaggctatgtagaaagaa |
267550 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgttgatgatatcgagcaactacaggctttggctggag |
259 |
Q |
| |
|
||||||||||||||||||||||||| | ||||| | ||| | || ||||||||||||| |
|
|
| T |
267549 |
gattcttttgattctcgatgatgttaacgatataaaacaattgcatgctttggctggag |
267491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 28163784 - 28163562
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagcttcaaataaagtgaaacatc |
100 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||| | | ||||||||| ||| |||| |||||||||||| || || || ||||||||| |
|
|
| T |
28163784 |
cttgcaaaagcaatttataatttcattgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatc |
28163685 |
T |
|
| Q |
101 |
tccaggaggagctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaa |
200 |
Q |
| |
|
||||||| ||||| ||||| ||||| || | || |||||||| ||||||||||||||||||||| | ||||| ||||||| ||| ||| || |
|
|
| T |
28163684 |
tccaggaagagct-ctttttgaaacagttagatcggacattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaataa |
28163586 |
T |
|
| Q |
201 |
gattcttttgattctcgatgatgt |
224 |
Q |
| |
|
|||||||||||||| |||||||| |
|
|
| T |
28163585 |
aattcttttgattcttgatgatgt |
28163562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 3280432 - 3280511
Alignment:
| Q |
1 |
cttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgttagagagaattcagc |
80 |
Q |
| |
|
||||||| |||| |||||||||| |||||| ||||||||||||| |||||||||| | ||||| ||||| |||||||| |
|
|
| T |
3280432 |
cttgcaagagcagtttataatttcattgctaatcaatttgaatgtgtatgttttcttcacaatgtgagagaaaattcagc |
3280511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 16691648 - 16691696
Alignment:
| Q |
9 |
agcaatttataattttattgctgatcaatttgaatgctcatgttttctt |
57 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| | ||||||||| |
|
|
| T |
16691648 |
agcaatttataatttgattgctgatcaatttgaatgtttgtgttttctt |
16691696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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