View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16566_low_54 (Length: 249)

Name: NF16566_low_54
Description: NF16566
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16566_low_54
NF16566_low_54
[»] chr3 (33 HSPs)
chr3 (104-184)||(21783586-21783666)
chr3 (205-249)||(13948871-13948915)
chr3 (205-249)||(29118629-29118673)
chr3 (208-249)||(23458070-23458111)
chr3 (208-249)||(26463723-26463764)
chr3 (208-249)||(29118832-29118873)
chr3 (208-249)||(40758406-40758447)
chr3 (208-249)||(46475077-46475118)
chr3 (209-249)||(10307670-10307710)
chr3 (209-249)||(11910790-11910830)
chr3 (209-249)||(32306515-32306555)
chr3 (205-249)||(41422063-41422107)
chr3 (209-249)||(52032229-52032269)
chr3 (210-249)||(3469291-3469330)
chr3 (210-249)||(21185993-21186032)
chr3 (211-249)||(42343030-42343068)
chr3 (208-249)||(2796410-2796451)
chr3 (208-249)||(33689472-33689513)
chr3 (208-249)||(35643942-35643983)
chr3 (208-249)||(36417984-36418025)
chr3 (208-249)||(37778567-37778608)
chr3 (208-249)||(40033597-40033638)
chr3 (208-249)||(40788714-40788755)
chr3 (208-245)||(43384579-43384616)
chr3 (208-249)||(47551584-47551625)
chr3 (208-249)||(51994042-51994083)
chr3 (208-249)||(55052370-55052411)
chr3 (209-249)||(3469495-3469535)
chr3 (209-249)||(3596200-3596240)
chr3 (209-249)||(32306719-32306759)
chr3 (205-249)||(36417779-36417823)
chr3 (209-249)||(43998236-43998276)
chr3 (209-249)||(53757020-53757060)
[»] chr7 (31 HSPs)
chr7 (103-184)||(43123363-43123444)
chr7 (205-249)||(25628769-25628813)
chr7 (205-249)||(42618202-42618246)
chr7 (208-249)||(2640269-2640310)
chr7 (208-249)||(6571244-6571285)
chr7 (208-249)||(17886786-17886827)
chr7 (208-249)||(25628569-25628610)
chr7 (208-249)||(37657146-37657187)
chr7 (208-249)||(42731715-42731756)
chr7 (205-249)||(6253733-6253777)
chr7 (209-249)||(25453219-25453259)
chr7 (209-249)||(32934439-32934479)
chr7 (205-249)||(32934639-32934683)
chr7 (205-249)||(33828265-33828309)
chr7 (209-249)||(43266561-43266601)
chr7 (209-249)||(46205604-46205644)
chr7 (211-249)||(28469101-28469139)
chr7 (208-246)||(46204515-46204553)
chr7 (208-249)||(17102285-17102326)
chr7 (208-249)||(22081650-22081691)
chr7 (208-249)||(22827085-22827126)
chr7 (208-249)||(22871399-22871440)
chr7 (212-249)||(23058520-23058557)
chr7 (208-249)||(24389081-24389122)
chr7 (208-249)||(27992004-27992045)
chr7 (208-249)||(32068390-32068431)
chr7 (208-249)||(32688514-32688555)
chr7 (205-249)||(10600240-10600284)
chr7 (205-249)||(28890670-28890714)
chr7 (209-249)||(42618002-42618042)
chr7 (205-249)||(43266357-43266401)
[»] scaffold0771 (1 HSPs)
scaffold0771 (205-249)||(1011-1055)
[»] chr6 (18 HSPs)
chr6 (205-249)||(31407169-31407213)
chr6 (202-249)||(12065311-12065358)
chr6 (208-249)||(21627804-21627845)
chr6 (208-249)||(21836324-21836365)
chr6 (208-249)||(30726055-30726096)
chr6 (208-249)||(30804157-30804198)
chr6 (208-249)||(33517830-33517871)
chr6 (209-249)||(6517593-6517633)
chr6 (209-249)||(7160895-7160935)
chr6 (205-249)||(12080929-12080973)
chr6 (205-249)||(15913839-15913883)
chr6 (211-249)||(11435968-11436006)
chr6 (208-249)||(17734287-17734328)
chr6 (208-249)||(22502865-22502906)
chr6 (208-249)||(30337714-30337755)
chr6 (205-249)||(7905334-7905378)
chr6 (205-249)||(14196706-14196750)
chr6 (209-249)||(31406969-31407009)
[»] chr4 (37 HSPs)
chr4 (205-249)||(27891675-27891719)
chr4 (205-249)||(51692812-51692856)
chr4 (103-184)||(55866297-55866379)
chr4 (208-249)||(10408183-10408224)
chr4 (208-249)||(14802031-14802072)
chr4 (208-249)||(27069001-27069042)
chr4 (208-249)||(46661210-46661251)
chr4 (208-249)||(51859498-51859539)
chr4 (208-249)||(52573319-52573360)
chr4 (208-249)||(54858651-54858692)
chr4 (209-249)||(1178134-1178174)
chr4 (205-249)||(5818066-5818110)
chr4 (205-249)||(8438371-8438415)
chr4 (205-249)||(34765471-34765515)
chr4 (205-249)||(52909546-52909590)
chr4 (209-249)||(54858855-54858895)
chr4 (210-249)||(8439522-8439561)
chr4 (210-249)||(22718030-22718069)
chr4 (210-249)||(22987147-22987186)
chr4 (211-249)||(37976244-37976282)
chr4 (208-249)||(7452099-7452140)
chr4 (208-249)||(13058278-13058319)
chr4 (208-249)||(17356016-17356057)
chr4 (208-249)||(30642442-30642483)
chr4 (208-249)||(39701203-39701244)
chr4 (208-249)||(44967160-44967201)
chr4 (208-249)||(49879298-49879339)
chr4 (208-249)||(50418759-50418800)
chr4 (208-249)||(50503916-50503957)
chr4 (208-249)||(53129597-53129638)
chr4 (208-249)||(54086786-54086827)
chr4 (205-249)||(9400610-9400654)
chr4 (209-249)||(10407980-10408020)
chr4 (209-249)||(36008935-36008975)
chr4 (209-249)||(45463164-45463204)
chr4 (209-249)||(50504120-50504160)
chr4 (209-249)||(51859701-51859741)
[»] chr2 (21 HSPs)
chr2 (205-249)||(13692513-13692557)
chr2 (205-249)||(36755381-36755425)
chr2 (208-249)||(15604633-15604674)
chr2 (208-249)||(15848384-15848425)
chr2 (208-249)||(34448091-34448132)
chr2 (208-249)||(44713886-44713927)
chr2 (209-249)||(8342278-8342318)
chr2 (208-246)||(22051088-22051126)
chr2 (208-249)||(6658143-6658184)
chr2 (208-249)||(8710762-8710803)
chr2 (208-249)||(10713019-10713060)
chr2 (208-249)||(11163145-11163186)
chr2 (208-249)||(16099320-16099361)
chr2 (208-249)||(36382423-36382464)
chr2 (208-249)||(36480014-36480055)
chr2 (208-249)||(37895438-37895479)
chr2 (208-249)||(39423811-39423852)
chr2 (208-249)||(41588352-41588393)
chr2 (209-249)||(15604430-15604470)
chr2 (209-249)||(28226039-28226079)
chr2 (205-249)||(41587325-41587369)
[»] chr1 (43 HSPs)
chr1 (205-249)||(35152636-35152680)
chr1 (207-249)||(37929509-37929551)
chr1 (208-249)||(1841755-1841796)
chr1 (208-249)||(6367858-6367899)
chr1 (208-249)||(14879267-14879308)
chr1 (208-249)||(40210461-40210502)
chr1 (208-249)||(48779415-48779456)
chr1 (205-249)||(7821247-7821291)
chr1 (205-249)||(8898608-8898652)
chr1 (205-249)||(12905950-12905994)
chr1 (209-249)||(13914159-13914199)
chr1 (209-249)||(20760800-20760840)
chr1 (205-249)||(24009666-24009710)
chr1 (209-249)||(31051041-31051081)
chr1 (209-249)||(35040909-35040949)
chr1 (205-249)||(36694373-36694417)
chr1 (205-249)||(36710474-36710518)
chr1 (209-249)||(40714738-40714778)
chr1 (205-249)||(41099026-41099070)
chr1 (210-249)||(49955643-49955682)
chr1 (211-249)||(17661942-17661980)
chr1 (103-145)||(25065804-25065846)
chr1 (205-247)||(43759115-43759157)
chr1 (208-249)||(183312-183353)
chr1 (208-249)||(1103757-1103798)
chr1 (208-249)||(4960805-4960846)
chr1 (208-249)||(7371381-7371422)
chr1 (208-249)||(7821045-7821086)
chr1 (208-249)||(19017720-19017761)
chr1 (208-249)||(26024688-26024729)
chr1 (208-249)||(28324895-28324936)
chr1 (208-249)||(30711623-30711664)
chr1 (208-249)||(34464540-34464581)
chr1 (208-249)||(35038546-35038587)
chr1 (208-249)||(37578283-37578324)
chr1 (208-249)||(40714535-40714576)
chr1 (208-249)||(49723022-49723063)
chr1 (208-249)||(49955438-49955479)
chr1 (209-249)||(8898812-8898852)
chr1 (205-249)||(28011630-28011674)
chr1 (209-249)||(28325099-28325139)
chr1 (205-249)||(35473722-35473766)
chr1 (209-249)||(45749933-45749973)
[»] scaffold0328 (2 HSPs)
scaffold0328 (208-249)||(11231-11272)
scaffold0328 (208-249)||(11434-11475)
[»] scaffold0042 (1 HSPs)
scaffold0042 (208-249)||(12074-12115)
[»] scaffold0006 (1 HSPs)
scaffold0006 (208-249)||(222083-222124)
[»] scaffold0005 (1 HSPs)
scaffold0005 (208-249)||(37655-37696)
[»] chr8 (32 HSPs)
chr8 (208-249)||(8316744-8316785)
chr8 (208-249)||(15230225-15230266)
chr8 (208-249)||(23663636-23663677)
chr8 (208-249)||(36928772-36928813)
chr8 (208-249)||(38862859-38862900)
chr8 (208-249)||(39071938-39071979)
chr8 (208-249)||(42945205-42945246)
chr8 (205-249)||(8997980-8998024)
chr8 (205-249)||(12199041-12199085)
chr8 (205-249)||(12443469-12443513)
chr8 (205-249)||(34685551-34685595)
chr8 (205-249)||(35634390-35634434)
chr8 (209-249)||(37542520-37542560)
chr8 (205-249)||(41353864-41353908)
chr8 (208-249)||(2535846-2535887)
chr8 (208-249)||(10445629-10445670)
chr8 (208-249)||(12273009-12273050)
chr8 (208-249)||(25124654-25124695)
chr8 (208-249)||(34061624-34061665)
chr8 (208-249)||(34177266-34177307)
chr8 (208-249)||(35756878-35756919)
chr8 (208-249)||(42945408-42945449)
chr8 (208-249)||(44664599-44664640)
chr8 (209-249)||(234035-234075)
chr8 (209-249)||(710446-710486)
chr8 (209-249)||(747658-747698)
chr8 (209-249)||(871553-871593)
chr8 (209-249)||(6471985-6472025)
chr8 (209-249)||(15230022-15230062)
chr8 (205-249)||(27500379-27500423)
chr8 (209-249)||(38003546-38003586)
chr8 (205-249)||(38955965-38956009)
[»] chr5 (37 HSPs)
chr5 (208-249)||(5994185-5994226)
chr5 (208-249)||(6150716-6150757)
chr5 (208-249)||(8322700-8322741)
chr5 (208-249)||(11047733-11047774)
chr5 (208-249)||(13362318-13362359)
chr5 (208-249)||(14194514-14194555)
chr5 (208-249)||(16156946-16156987)
chr5 (208-249)||(28269513-28269554)
chr5 (208-249)||(39453595-39453636)
chr5 (208-249)||(43159110-43159151)
chr5 (205-249)||(186712-186756)
chr5 (205-249)||(5255108-5255152)
chr5 (205-249)||(17544339-17544383)
chr5 (209-249)||(20152872-20152912)
chr5 (205-249)||(38442360-38442404)
chr5 (202-249)||(11741807-11741854)
chr5 (210-249)||(33871430-33871469)
chr5 (211-249)||(35920319-35920357)
chr5 (208-249)||(3528964-3529005)
chr5 (208-249)||(6301839-6301880)
chr5 (208-249)||(8875540-8875581)
chr5 (208-249)||(11762013-11762054)
chr5 (208-249)||(13963125-13963166)
chr5 (208-249)||(17202695-17202736)
chr5 (208-249)||(19892399-19892440)
chr5 (208-249)||(20153212-20153253)
chr5 (208-249)||(20814226-20814267)
chr5 (208-249)||(21265234-21265275)
chr5 (208-249)||(27587411-27587452)
chr5 (208-249)||(27937144-27937185)
chr5 (208-249)||(32242538-32242579)
chr5 (208-249)||(33871632-33871673)
chr5 (208-249)||(38475124-38475165)
chr5 (208-248)||(5024111-5024151)
chr5 (205-249)||(17544139-17544183)
chr5 (209-249)||(21287834-21287874)
chr5 (209-249)||(22298633-22298673)
[»] scaffold0599 (1 HSPs)
scaffold0599 (209-249)||(2484-2524)
[»] scaffold0347 (1 HSPs)
scaffold0347 (103-149)||(14463-14509)
[»] scaffold0295 (1 HSPs)
scaffold0295 (208-249)||(2439-2480)
[»] scaffold0031 (1 HSPs)
scaffold0031 (208-249)||(69261-69302)


Alignment Details
Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 184
Target Start/End: Complemental strand, 21783666 - 21783586
Alignment:
Q  104 agggaagattttgagaagatgaacacatgggcttaatggtcttttcacatttgtctgtaaagctcaggggtattttagtcc 184  Q
    |||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||| ||| ||| ||||||||| ||||    
T  21783666 agggaagattttaagaagatgaacacatgggtataatggtcttttcacatttgtctgtgaagttcaagggtattttcgtcc 21783586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 13948915 - 13948871
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||  ||||||||||||||||||||||    
T  13948915 tgacagtgattaagttggtcaaaggacgaaattttaaatgattaa 13948871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 29118673 - 29118629
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||  ||||||||||||||||||||||    
T  29118673 tgacagtgattaagttggtcaaaggacgaaattttaaatgattaa 29118629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 23458111 - 23458070
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  23458111 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 23458070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 26463764 - 26463723
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  26463764 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 26463723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 29118832 - 29118873
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  29118832 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 29118873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 40758406 - 40758447
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  40758406 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 40758447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 46475077 - 46475118
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  46475077 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 46475118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 10307670 - 10307710
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  10307670 agtgattaagttggtcaaaggacgaaattttaaatgattaa 10307710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 11910830 - 11910790
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  11910830 agtgattaagttggtcaaaggacgaaattttaaatgattaa 11910790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 32306555 - 32306515
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  32306555 agtgattaagttggtcaaaggacgaaattttaaatgattaa 32306515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 41422107 - 41422063
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||   |||||||||||||||||||||    
T  41422107 tgacagtgattaagttggtcaaatgacgaaattttaaatgattaa 41422063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 52032269 - 52032229
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  52032269 agtgattaagttggtcaaaggacgaaattttaaatgattaa 52032229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 210 - 249
Target Start/End: Complemental strand, 3469330 - 3469291
Alignment:
Q  210 gtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  3469330 gtgattaagttggtcaaaggacgaaattttaaatgattaa 3469291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 210 - 249
Target Start/End: Original strand, 21185993 - 21186032
Alignment:
Q  210 gtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||| ||||| |||||||||||||||||||||||    
T  21185993 gtgattaagtgggtcaagggacgaaattttaaatgattaa 21186032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 249
Target Start/End: Original strand, 42343030 - 42343068
Alignment:
Q  211 tgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  42343030 tgattaagttggtcaaaggacgaaattttaaatgattaa 42343068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 2796410 - 2796451
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  |||||||||||||| |||||||    
T  2796410 cagtgattaagttggtcaaaggacgaaattttaactgattaa 2796451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 33689513 - 33689472
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  |||| |||||||||||||||||    
T  33689513 cagtgattaagttggtcaaaggacaaaattttaaatgattaa 33689472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 35643983 - 35643942
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||| ||||  ||||||||||||||||||||||    
T  35643983 cagtgattaagtttgtcaaaggacgaaattttaaatgattaa 35643942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 36417984 - 36418025
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||| ||||  ||||||||||||||||||||||    
T  36417984 cagtgattaagtttgtcaaaggacgaaattttaaatgattaa 36418025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 37778567 - 37778608
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||| ||||||||||||||||||    
T  37778567 cagtgattaagttggtcaaaggatgaaattttaaatgattaa 37778608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 40033638 - 40033597
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||   |||||||||||||||||||||    
T  40033638 cagtgattaagttggtcaaatgacgaaattttaaatgattaa 40033597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 40788714 - 40788755
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||| ||||||    
T  40788714 cagtgattaagttggtcaaaggacgaaattttaaaagattaa 40788755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 245
Target Start/End: Original strand, 43384579 - 43384616
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatga 245  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  43384579 cagtgattaagttggtcaaaggacgaaattttaaatga 43384616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 47551625 - 47551584
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||| ||||||||||||||||||    
T  47551625 cagtgattaagttggtcaaaggatgaaattttaaatgattaa 47551584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 51994083 - 51994042
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  |||| |||||||||||||||||    
T  51994083 cagtgattaagttggtcaaaggactaaattttaaatgattaa 51994042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 55052411 - 55052370
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  |||| |||||||||||||||||    
T  55052411 cagtgattaagttggtcaaaggactaaattttaaatgattaa 55052370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 3469495 - 3469535
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||  ||||| ||||||||||||||||    
T  3469495 agtgattaagttggtcaaaggacggaattttaaatgattaa 3469535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 3596240 - 3596200
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||  | ||||||||||||||||||||    
T  3596240 agtgattaagttggtcaaagaacgaaattttaaatgattaa 3596200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 32306719 - 32306759
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||   |||||||||||||||||||||    
T  32306719 agtgattaagttggtcaaatgacgaaattttaaatgattaa 32306759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 36417823 - 36417779
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||| ||||||||||| ||||  ||||||||||||||||||||||    
T  36417823 tgacggtgattaagtttgtcaaaggacgaaattttaaatgattaa 36417779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 43998276 - 43998236
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||   |||||||||||||||||||||    
T  43998276 agtgattaagttggtcaaatgacgaaattttaaatgattaa 43998236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 53757020 - 53757060
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||| |  ||||||||||||||||||||||    
T  53757020 agtgattaagttggttaaaggacgaaattttaaatgattaa 53757060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 184
Target Start/End: Complemental strand, 43123444 - 43123363
Alignment:
Q  103 gagggaagattttgagaagatgaacacatgggcttaatggtcttttcacatttgtctgtaaagctcaggggtattttagtcc 184  Q
    ||||||||||||| ||||||||||||||||||  ||||||||||||||| ||||||||| ||| | | ||||||||| ||||    
T  43123444 gagggaagattttaagaagatgaacacatgggtataatggtcttttcacgtttgtctgtgaagttgaagggtattttcgtcc 43123363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 25628769 - 25628813
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||  ||||||||||||||||||||||    
T  25628769 tgacagtgattaagttggtcaaaggacgaaattttaaatgattaa 25628813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 42618202 - 42618246
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||  ||||||||||||||||||||||    
T  42618202 tgacagtgattaagttggtcaaaggacgaaattttaaatgattaa 42618246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 2640310 - 2640269
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  2640310 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 2640269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 6571244 - 6571285
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  6571244 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 6571285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 17886786 - 17886827
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  17886786 cagtgattaagtgggtcaagggacgaaattttaaatgattaa 17886827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 25628610 - 25628569
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  25628610 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 25628569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 37657146 - 37657187
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  37657146 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 37657187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 42731715 - 42731756
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  42731715 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 42731756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 6253733 - 6253777
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||  |||| |||||||||||||||||    
T  6253733 tgacagtgattaagttggtcaaaggactaaattttaaatgattaa 6253777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 25453259 - 25453219
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  25453259 agtgattaagttggtcaaaggacgaaattttaaatgattaa 25453219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 32934479 - 32934439
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  32934479 agtgattaagttggtcaaaggacgaaattttaaatgattaa 32934439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 32934639 - 32934683
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||   |||||||||||||||||||||    
T  32934639 tgacagtgattaagttggtcaaatgacgaaattttaaatgattaa 32934683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 33828265 - 33828309
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||   |||||||||||||||||||||    
T  33828265 tgacagtgattaagttggtcaaatgacgaaattttaaatgattaa 33828309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 43266561 - 43266601
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  43266561 agtgattaagttggtcaaaggacgaaattttaaatgattaa 43266601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 46205604 - 46205644
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  46205604 agtgattaagttggtcaaaggacgaaattttaaatgattaa 46205644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 249
Target Start/End: Complemental strand, 28469139 - 28469101
Alignment:
Q  211 tgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  28469139 tgattaagttggtcaaaggacgaaattttaaatgattaa 28469101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 246
Target Start/End: Complemental strand, 46204553 - 46204515
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgat 246  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  46204553 cagtgattaagttggtcaatggacgaaattttaaatgat 46204515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 17102285 - 17102326
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  |||| |||||||||||||||||    
T  17102285 cagtgattaagttggtcaaaggactaaattttaaatgattaa 17102326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 22081691 - 22081650
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||| |||  ||||||||||||||||||||||    
T  22081691 cagtgattaagttgatcaaaggacgaaattttaaatgattaa 22081650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 22827126 - 22827085
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||| ||||| || ||||||||||||||||||||    
T  22827126 cagtgattaagtgggtcaaggaacgaaattttaaatgattaa 22827085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 22871440 - 22871399
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||| |||||||  ||||||||||||||||||||||    
T  22871440 cagtgattaaattggtcaaaggacgaaattttaaatgattaa 22871399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 212 - 249
Target Start/End: Complemental strand, 23058557 - 23058520
Alignment:
Q  212 gattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  23058557 gattaagttggtcaaaggacgaaattttaaatgattaa 23058520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 24389081 - 24389122
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  |||| |||||||||||||||||    
T  24389081 cagtgattaagttggtcaaaggacaaaattttaaatgattaa 24389122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 27992004 - 27992045
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  |||| |||||||||||||||||    
T  27992004 cagtgattaagttggtcaaaggactaaattttaaatgattaa 27992045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 32068390 - 32068431
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||   |||||||||||||||||||||    
T  32068390 cagtgattaagttggtcaaatgacgaaattttaaatgattaa 32068431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 32688514 - 32688555
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||| ||||||| ||||| |||||||||||||||||||||||    
T  32688514 cagttattaagtgggtcaagggacgaaattttaaatgattaa 32688555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 10600240 - 10600284
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||  |||| ||||||| |||||||||    
T  10600240 tgacagtgattaagttggtcaaaggacaaaattttgaatgattaa 10600284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 28890714 - 28890670
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||| ||||   |||||||||||||||||||||    
T  28890714 tgacagtgattaagttagtcaaaagacgaaattttaaatgattaa 28890670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 42618042 - 42618002
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||| |||  ||||||||||||||||||||||    
T  42618042 agtgattaagttgatcaaaggacgaaattttaaatgattaa 42618002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 43266401 - 43266357
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||   || ||||||||||||||||||    
T  43266401 tgacagtgattaagttggtcaaatgatgaaattttaaatgattaa 43266357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 1055 - 1011
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||  ||||||||||||||||||||||    
T  1055 tgacagtgattaagttggtcaaaggacgaaattttaaatgattaa 1011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000006; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 31407169 - 31407213
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||  ||||||||||||||||||||||    
T  31407169 tgacagtgattaagttggtcaaaggacgaaattttaaatgattaa 31407213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 249
Target Start/End: Complemental strand, 12065358 - 12065311
Alignment:
Q  202 acctgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||||||||  || |||||||||||||||||||    
T  12065358 acctgacagtgattaagttggtcaaaggtcgaaattttaaatgattaa 12065311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 21627845 - 21627804
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  21627845 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 21627804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 21836324 - 21836365
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  21836324 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 21836365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 30726055 - 30726096
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  30726055 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 30726096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 30804157 - 30804198
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  30804157 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 30804198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 33517830 - 33517871
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  33517830 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 33517871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 6517633 - 6517593
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  6517633 agtgattaagttggtcaaaggacgaaattttaaatgattaa 6517593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 7160935 - 7160895
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  7160935 agtgattaagttggtcaaaggacgaaattttaaatgattaa 7160895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 12080929 - 12080973
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||| |||||||||||||  ||||||||||||||||||||||    
T  12080929 tgacagtaattaagttggtcaaaggacgaaattttaaatgattaa 12080973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 15913839 - 15913883
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||  |||||||||||||||| |||||    
T  15913839 tgacagtgattaagttggtcaaaggacgaaattttaaattattaa 15913883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 249
Target Start/End: Original strand, 11435968 - 11436006
Alignment:
Q  211 tgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||| ||||| |||||||||||||||||||||||    
T  11435968 tgattaagtgggtcaagggacgaaattttaaatgattaa 11436006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 17734328 - 17734287
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||| |||||||  ||||||||||||||||||||||    
T  17734328 cagtgattaaattggtcaaaggacgaaattttaaatgattaa 17734287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 22502906 - 22502865
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||| |||||||||||||  ||||||||||||||||||||||    
T  22502906 cagttattaagttggtcaaaggacgaaattttaaatgattaa 22502865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 30337714 - 30337755
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||| |||||||  ||||||||||||||||||||||    
T  30337714 cagtgattaaattggtcaaaggacgaaattttaaatgattaa 30337755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 7905378 - 7905334
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||| ||||||||||||||||   |||||||||||||||||||||    
T  7905378 tgacggtgattaagttggtcaaatgacgaaattttaaatgattaa 7905334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 14196750 - 14196706
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||||   |||| |||||||||||||||||    
T  14196750 tgacagtgattaagttggtccaaggaccaaattttaaatgattaa 14196706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 31407009 - 31406969
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||| ||||  ||||||||||||||||||||||    
T  31407009 agtgattaagtttgtcaaaggacgaaattttaaatgattaa 31406969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000006; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 27891719 - 27891675
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||  ||||||||||||||||||||||    
T  27891719 tgacagtgattaagttggtcaaaggacgaaattttaaatgattaa 27891675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 51692812 - 51692856
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||  ||||||||||||||||||||||    
T  51692812 tgacagtgattaagttggtcaaaggacgaaattttaaatgattaa 51692856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 184
Target Start/End: Complemental strand, 55866379 - 55866297
Alignment:
Q  103 gagggaagattttgagaagat-gaacacatgggcttaatggtcttttcacatttgtctgtaaagctcaggggtattttagtcc 184  Q
    ||||||||||||| ||||||| |||||||||||  | |||||||||| || ||||||||| ||| ||| ||||||||| ||||    
T  55866379 gagggaagattttaagaagattgaacacatgggtatgatggtctttttacgtttgtctgtgaagttcaagggtattttcgtcc 55866297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 10408183 - 10408224
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  10408183 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 10408224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 14802031 - 14802072
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  14802031 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 14802072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 27069042 - 27069001
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  27069042 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 27069001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 46661210 - 46661251
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  46661210 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 46661251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 51859539 - 51859498
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  51859539 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 51859498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 52573360 - 52573319
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  52573360 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 52573319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 54858692 - 54858651
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  54858692 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 54858651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 1178174 - 1178134
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  1178174 agtgattaagttggtcaaaggacgaaattttaaatgattaa 1178134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 5818066 - 5818110
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||    
T  5818066 tgacagtgattaagttggtcaaaggatgaaattttaaatgattaa 5818110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 8438415 - 8438371
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||| |||||||||| ||||| |||||||||||||||||||||||    
T  8438415 tgacggtgattaagtgggtcaagggacgaaattttaaatgattaa 8438371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 34765515 - 34765471
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||    
T  34765515 tgacagtgattaagttgatcaaaggacgaaattttaaatgattaa 34765471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 52909546 - 52909590
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||  |||||||||||||||| |||||    
T  52909546 tgacagtgattaagttggtcaaaggacgaaattttaaataattaa 52909590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 54858855 - 54858895
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  54858855 agtgattaagttggtcaaaggacgaaattttaaatgattaa 54858895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 210 - 249
Target Start/End: Original strand, 8439522 - 8439561
Alignment:
Q  210 gtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||| ||||| |||||||||||||||||||||||    
T  8439522 gtgattaagtgggtcaagggacgaaattttaaatgattaa 8439561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 210 - 249
Target Start/End: Complemental strand, 22718069 - 22718030
Alignment:
Q  210 gtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  22718069 gtgattaagttggtcaaaggacgaaattttaaatgattaa 22718030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 210 - 249
Target Start/End: Original strand, 22987147 - 22987186
Alignment:
Q  210 gtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  22987147 gtgattaagttggtcaaaggacgaaattttaaatgattaa 22987186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 249
Target Start/End: Complemental strand, 37976282 - 37976244
Alignment:
Q  211 tgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  37976282 tgattaagttggtcaaaggacgaaattttaaatgattaa 37976244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 7452099 - 7452140
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  |||| |||||||||||||||||    
T  7452099 cagtgattaagttggtcaaaggactaaattttaaatgattaa 7452140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 13058278 - 13058319
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  |||| |||||||||||||||||    
T  13058278 cagtgattaagttggtcaaaggactaaattttaaatgattaa 13058319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 17356057 - 17356016
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||   |||||||||||||||||||||    
T  17356057 cagtgattaagttggtcaaatgacgaaattttaaatgattaa 17356016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 30642442 - 30642483
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||| ||||||| ||||| |||||||||||||||||||||||    
T  30642442 cagtcattaagtgggtcaagggacgaaattttaaatgattaa 30642483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 39701203 - 39701244
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||   |||||||||||||||||||||    
T  39701203 cagtgattaagttggtcaaatgacgaaattttaaatgattaa 39701244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 44967201 - 44967160
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  |||| |||||||||||||||||    
T  44967201 cagtgattaagttggtcaaaggactaaattttaaatgattaa 44967160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 49879339 - 49879298
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||| |||||||  ||||||||||||||||||||||    
T  49879339 cagtgattaaattggtcaaaggacgaaattttaaatgattaa 49879298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 50418800 - 50418759
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||| |||||||  ||||||||||||||||||||||    
T  50418800 cagtgattaaattggtcaaaggacgaaattttaaatgattaa 50418759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 50503957 - 50503916
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||| ||||||||||||||||    
T  50503957 cagtgattaagttggtcaaaggacggaattttaaatgattaa 50503916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 53129638 - 53129597
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  | ||||||||||||||||||||    
T  53129638 cagtgattaagttggtcaaagaacgaaattttaaatgattaa 53129597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 54086827 - 54086786
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  |||| |||||||||||||||||    
T  54086827 cagtgattaagttggtcaaaggacaaaattttaaatgattaa 54086786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 9400654 - 9400610
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||||   |||| |||||||||||||||||    
T  9400654 tgacagtgattaagttggtccaaggaccaaattttaaatgattaa 9400610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 10408020 - 10407980
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||| |||  ||||||||||||||||||||||    
T  10408020 agtgattaagttgatcaaaggacgaaattttaaatgattaa 10407980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 36008975 - 36008935
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||  |||| |||||||||||||||||    
T  36008975 agtgattaagttggtcaaaggactaaattttaaatgattaa 36008935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 45463204 - 45463164
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||   |||||||||||||||||||||    
T  45463204 agtgattaagttggtcaaatgacgaaattttaaatgattaa 45463164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 50504120 - 50504160
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||| ||||  ||||||||||||||||||||||    
T  50504120 agtgattaagtttgtcaaaggacgaaattttaaatgattaa 50504160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 51859701 - 51859741
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||| |||  ||||||||||||||||||||||    
T  51859701 agtgattaagttgatcaaaggacgaaattttaaatgattaa 51859741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000006; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 13692513 - 13692557
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||  ||||||||||||||||||||||    
T  13692513 tgacagtgattaagttggtcaaaggacgaaattttaaatgattaa 13692557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 36755381 - 36755425
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||  ||||||||||||||||||||||    
T  36755381 tgacagtgattaagttggtcaaaggacgaaattttaaatgattaa 36755425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 15604633 - 15604674
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  15604633 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 15604674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 15848384 - 15848425
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  15848384 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 15848425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 34448091 - 34448132
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  34448091 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 34448132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 44713927 - 44713886
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  44713927 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 44713886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 8342318 - 8342278
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  8342318 agtgattaagttggtcaaaggacgaaattttaaatgattaa 8342278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 246
Target Start/End: Complemental strand, 22051126 - 22051088
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgat 246  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  22051126 cagtgattaagttggtcaaaggacgaaattttaaatgat 22051088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 6658143 - 6658184
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  |||| |||||||||||||||||    
T  6658143 cagtgattaagttggtcaaaggactaaattttaaatgattaa 6658184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 8710762 - 8710803
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||| ||||||||||  ||||||||||||||||||||||    
T  8710762 cagtgataaagttggtcaaaggacgaaattttaaatgattaa 8710803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 10713019 - 10713060
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  |||||| |||||||||||||||    
T  10713019 cagtgattaagttggtcaaaggacgacattttaaatgattaa 10713060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 11163186 - 11163145
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  |||| |||||||||||||||||    
T  11163186 cagtgattaagttggtcaaaggactaaattttaaatgattaa 11163145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 16099320 - 16099361
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  |||| |||||||||||||||||    
T  16099320 cagtgattaagttggtcaaaggactaaattttaaatgattaa 16099361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 36382423 - 36382464
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||| ||  ||||||||||||||||||||||    
T  36382423 cagtgattaagttggccaaaggacgaaattttaaatgattaa 36382464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 36480014 - 36480055
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  |||||||||||||||| |||||    
T  36480014 cagtgattaagttggtcaaaggacgaaattttaaattattaa 36480055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 37895479 - 37895438
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||| ||||||||||||||||||    
T  37895479 cagtgattaagttggtcaaaggatgaaattttaaatgattaa 37895438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 39423811 - 39423852
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  |||| |||||||||||||||||    
T  39423811 cagtgattaagttggtcaaaggacaaaattttaaatgattaa 39423852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 41588352 - 41588393
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||| ||||||||||||||||||    
T  41588352 cagtgattaagttggtcaaaggatgaaattttaaatgattaa 41588393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 15604470 - 15604430
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||| |||  ||||||||||||||||||||||    
T  15604470 agtgattaagttgatcaaaggacgaaattttaaatgattaa 15604430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 28226039 - 28226079
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||  | ||||||||||||||||||||    
T  28226039 agtgattaagttggtcaaagtacgaaattttaaatgattaa 28226079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 41587369 - 41587325
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||| |  ||| ||||||||||||||||||    
T  41587369 tgacagtgattaagttggttaaaggatgaaattttaaatgattaa 41587325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000006; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 35152636 - 35152680
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||  ||||||||||||||||||||||    
T  35152636 tgacagtgattaagttggtcaaaggacgaaattttaaatgattaa 35152680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 207 - 249
Target Start/End: Complemental strand, 37929551 - 37929509
Alignment:
Q  207 acagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||  ||||||||||||||||||||||    
T  37929551 acagtgattaagttggtcaaaggacgaaattttaaatgattaa 37929509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 1841755 - 1841796
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  1841755 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 1841796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 6367858 - 6367899
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  6367858 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 6367899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 14879267 - 14879308
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  14879267 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 14879308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 40210502 - 40210461
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  40210502 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 40210461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 48779415 - 48779456
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  48779415 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 48779456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 7821247 - 7821291
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||  |||||||||| |||||||||||    
T  7821247 tgacagtgattaagttggtcaaaggacgaaattataaatgattaa 7821291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 8898652 - 8898608
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||| |||||||  ||||||||||||||||||||||    
T  8898652 tgacagtgattaaattggtcaaaggacgaaattttaaatgattaa 8898608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 12905950 - 12905994
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||   |||||||||||||||||||||    
T  12905950 tgacagtgattaagttggtcaaatgacgaaattttaaatgattaa 12905994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 13914199 - 13914159
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  13914199 agtgattaagttggtcaaaggacgaaattttaaatgattaa 13914159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 20760800 - 20760840
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  20760800 agtgattaagttggtcaaaggacgaaattttaaatgattaa 20760840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 24009710 - 24009666
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||    
T  24009710 tgacagtgattaagttggtcaaaggatgaaattttaaatgattaa 24009666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 31051081 - 31051041
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  31051081 agtgattaagttggtcaaaggacgaaattttaaatgattaa 31051041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 35040909 - 35040949
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  35040909 agtgattaagttggtcaaaggacgaaattttaaatgattaa 35040949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 36694417 - 36694373
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||  || |||||||||||||||||||    
T  36694417 tgacagtgattaagttggtcaaagggcgaaattttaaatgattaa 36694373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 36710518 - 36710474
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||  || |||||||||||||||||||    
T  36710518 tgacagtgattaagttggtcaaagggcgaaattttaaatgattaa 36710474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 40714738 - 40714778
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  40714738 agtgattaagttggtcaaaggacgaaattttaaatgattaa 40714778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 41099026 - 41099070
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||   |||||||||||||||||||||    
T  41099026 tgacagtgattaagttggtcaaatgacgaaattttaaatgattaa 41099070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 210 - 249
Target Start/End: Original strand, 49955643 - 49955682
Alignment:
Q  210 gtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  49955643 gtgattaagttggtcaaaggacgaaattttaaatgattaa 49955682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 249
Target Start/End: Complemental strand, 17661980 - 17661942
Alignment:
Q  211 tgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  17661980 tgattaagttggtcaaaggacgaaattttaaatgattaa 17661942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 145
Target Start/End: Original strand, 25065804 - 25065846
Alignment:
Q  103 gagggaagattttgagaagatgaacacatgggcttaatggtct 145  Q
    |||||||||||||||||||||||||||| |||  |||||||||    
T  25065804 gagggaagattttgagaagatgaacacaggggtataatggtct 25065846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 247
Target Start/End: Original strand, 43759115 - 43759157
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgatt 247  Q
    |||||||| ||||||||||||  ||||||||||||||||||||    
T  43759115 tgacagtggttaagttggtcaaaggacgaaattttaaatgatt 43759157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 183353 - 183312
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  |||| |||||||||||||||||    
T  183353 cagtgattaagttggtcaaaggactaaattttaaatgattaa 183312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 1103757 - 1103798
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||| |||||||||||  ||||||||||||||||||||||    
T  1103757 cagtgaataagttggtcaaaggacgaaattttaaatgattaa 1103798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 4960805 - 4960846
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||| |||  ||||||||||||||||||||||    
T  4960805 cagtgattaagttgatcaaaggacgaaattttaaatgattaa 4960846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 7371422 - 7371381
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  |||||||||||||||| |||||    
T  7371422 cagtgattaagttggtcaaaggacgaaattttaaataattaa 7371381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 7821086 - 7821045
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||| ||||||||  ||||||||||||||||||||||    
T  7821086 cagtgattacgttggtcaaaggacgaaattttaaatgattaa 7821045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 19017761 - 19017720
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  | ||||||||||||||||||||    
T  19017761 cagtgattaagttggtcaacgaacgaaattttaaatgattaa 19017720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 26024688 - 26024729
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||| |||||||  ||||||||||||||||||||||    
T  26024688 cagtgattaaattggtcaaaggacgaaattttaaatgattaa 26024729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 28324936 - 28324895
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||   |||||||||||||||||||||    
T  28324936 cagtgattaagttggtcaaaagacgaaattttaaatgattaa 28324895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 30711623 - 30711664
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||   |||||||||||||||||||||    
T  30711623 cagtgattaagttggtcaaatgacgaaattttaaatgattaa 30711664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 34464581 - 34464540
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||   |||||||||||||||||||||    
T  34464581 cagtgattaagttggtcaaatgacgaaattttaaatgattaa 34464540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 35038587 - 35038546
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||| |||||||||  ||||||||||||||||||||||    
T  35038587 cagtgattgagttggtcaaaggacgaaattttaaatgattaa 35038546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 37578324 - 37578283
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  | ||||||||||||||||||||    
T  37578324 cagtgattaagttggtcaaagaacgaaattttaaatgattaa 37578283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 40714576 - 40714535
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||   |||||||||||||||||||||    
T  40714576 cagtgattaagttggtcaaatgacgaaattttaaatgattaa 40714535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 49723022 - 49723063
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||| ||||||||||||||||||    
T  49723022 cagtgattaagttggtcaaaggatgaaattttaaatgattaa 49723063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 49955479 - 49955438
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  |||| |||||||||||||||||    
T  49955479 cagtgattaagttggtcaaaggacaaaattttaaatgattaa 49955438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 8898812 - 8898852
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||   |||||||||||||||||||||    
T  8898812 agtgattaagttggtcaaatgacgaaattttaaatgattaa 8898852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 28011630 - 28011674
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||||   |||| |||||||||||||||||    
T  28011630 tgacagtgattaagttggtccaaggaccaaattttaaatgattaa 28011674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 28325099 - 28325139
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||   |||||||||||||||||||||    
T  28325099 agtgattaagttggtcaaaagacgaaattttaaatgattaa 28325139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 35473766 - 35473722
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||  |||| |||||||||||| ||||    
T  35473766 tgacagtgattaagttggtcaaaggacaaaattttaaatgtttaa 35473722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 45749973 - 45749933
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||| ||||  ||||||||||||||||||||||    
T  45749973 agtgattaagtttgtcaaaggacgaaattttaaatgattaa 45749933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 11272 - 11231
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  11272 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 11231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 11434 - 11475
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||   |||||||||||||||||||||    
T  11434 cagtgattaagttggtcaaaagacgaaattttaaatgattaa 11475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 12074 - 12115
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  12074 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 12115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 222083 - 222124
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  222083 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 222124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 37696 - 37655
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  37696 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 37655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000003; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 8316785 - 8316744
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  8316785 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 8316744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 15230225 - 15230266
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  15230225 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 15230266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 23663677 - 23663636
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  23663677 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 23663636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 36928772 - 36928813
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  36928772 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 36928813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 38862859 - 38862900
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  38862859 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 38862900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 39071938 - 39071979
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  39071938 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 39071979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 42945246 - 42945205
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  42945246 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 42945205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 8997980 - 8998024
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||    
T  8997980 tgacagtgattaagttggtcaaaggacggaattttaaatgattaa 8998024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 12199085 - 12199041
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||| |||||||  ||||||||||||||||||||||    
T  12199085 tgacagtgattaaattggtcaaaggacgaaattttaaatgattaa 12199041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 12443513 - 12443469
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||| |||||||  ||||||||||||||||||||||    
T  12443513 tgacagtgattaaattggtcaaaggacgaaattttaaatgattaa 12443469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 34685551 - 34685595
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||   |||||||||||||||||||||    
T  34685551 tgacagtgattaagttggtcaaatgacgaaattttaaatgattaa 34685595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 35634390 - 35634434
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||| |  ||||||||||||||||||||||    
T  35634390 tgacagtgattaagttggttaaaggacgaaattttaaatgattaa 35634434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 37542520 - 37542560
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  37542520 agtgattaagttggtcaaaggacgaaattttaaatgattaa 37542560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 41353864 - 41353908
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||| ||||||||||||||||  ||||||||||||||||||||||    
T  41353864 tgacggtgattaagttggtcaaaggacgaaattttaaatgattaa 41353908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 2535846 - 2535887
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||| ||||||| ||||| |||||||||||||||||||||||    
T  2535846 cagtcattaagtgggtcaagggacgaaattttaaatgattaa 2535887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 10445629 - 10445670
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||   |||||||||||||||||||||    
T  10445629 cagtgattaagttggtcaaaagacgaaattttaaatgattaa 10445670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 12273050 - 12273009
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||| |||||||  ||||||||||||||||||||||    
T  12273050 cagtgattaaattggtcaaaggacgaaattttaaatgattaa 12273009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 25124695 - 25124654
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||| ||||||||||||  ||||||||||||||||||||||    
T  25124695 cagtggttaagttggtcaaaggacgaaattttaaatgattaa 25124654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 34061624 - 34061665
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||| |||||||  ||||||||||||||||||||||    
T  34061624 cagtgattaacttggtcaaaggacgaaattttaaatgattaa 34061665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 34177266 - 34177307
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||| ||||||| ||||| |||||||||||||||||||||||    
T  34177266 cagtcattaagtgggtcaagggacgaaattttaaatgattaa 34177307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 35756878 - 35756919
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||| ||||||||||||  ||||||||||||||||||||||    
T  35756878 cagtgcttaagttggtcaaaggacgaaattttaaatgattaa 35756919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 42945408 - 42945449
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||   |||||||||||||||||||||    
T  42945408 cagtgattaagttggtcaaatgacgaaattttaaatgattaa 42945449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 44664640 - 44664599
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||   |||||||||||||||||||||    
T  44664640 cagtgattaagttggtcaaatgacgaaattttaaatgattaa 44664599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 234035 - 234075
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||| |||  ||||||||||||||||||||||    
T  234035 agtgattaagttgatcaaaggacgaaattttaaatgattaa 234075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 710446 - 710486
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||| |||  ||||||||||||||||||||||    
T  710446 agtgattaagttgatcaaaggacgaaattttaaatgattaa 710486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 747658 - 747698
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||| |||  ||||||||||||||||||||||    
T  747658 agtgattaagttgatcaaaggacgaaattttaaatgattaa 747698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 871553 - 871593
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||| |||  ||||||||||||||||||||||    
T  871553 agtgattaagttgatcaaaggacgaaattttaaatgattaa 871593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 6471985 - 6472025
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||  |||| |||||||||||||||||    
T  6471985 agtgattaagttggtcaaaggacaaaattttaaatgattaa 6472025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 15230062 - 15230022
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||| |||  ||||||||||||||||||||||    
T  15230062 agtgattaagttgatcaaaggacgaaattttaaatgattaa 15230022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 27500379 - 27500423
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||   || ||||||||||||||||||    
T  27500379 tgacagtgattaagttggtcaaatgatgaaattttaaatgattaa 27500423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 38003586 - 38003546
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||  | ||||||||||||||||||||    
T  38003586 agtgattaagttggtcaaagaacgaaattttaaatgattaa 38003546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 38955965 - 38956009
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||| |||  |||| |||||||||||||||||    
T  38955965 tgacagtgattaagttgatcaaaggactaaattttaaatgattaa 38956009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000003; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 5994185 - 5994226
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  5994185 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 5994226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 6150716 - 6150757
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  6150716 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 6150757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 8322700 - 8322741
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  8322700 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 8322741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 11047733 - 11047774
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  11047733 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 11047774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 13362359 - 13362318
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  13362359 cagtgattaagttggtcagaggacgaaattttaaatgattaa 13362318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 14194555 - 14194514
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  14194555 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 14194514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 16156987 - 16156946
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  16156987 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 16156946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 28269554 - 28269513
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  28269554 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 28269513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 39453595 - 39453636
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  39453595 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 39453636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 43159110 - 43159151
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  43159110 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 43159151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 186712 - 186756
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||| |||||||||||||||  ||||||||||||||||||||||    
T  186712 tgacaatgattaagttggtcaaaggacgaaattttaaatgattaa 186756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 5255152 - 5255108
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||   |||||||||||||||||||||    
T  5255152 tgacagtgattaagttggtcaaatgacgaaattttaaatgattaa 5255108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 17544339 - 17544383
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||  |||| |||||||||||||||||    
T  17544339 tgacagtgattaagttggtcaaaggacaaaattttaaatgattaa 17544383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 20152912 - 20152872
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  20152912 agtgattaagttggtcaaaggacgaaattttaaatgattaa 20152872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 38442360 - 38442404
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||    
T  38442360 tgacagtgattaagttggtcaaaggacgaaattttaaatggttaa 38442404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 249
Target Start/End: Original strand, 11741807 - 11741854
Alignment:
Q  202 acctgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||| | |||||  ||||||||||||||||||||||    
T  11741807 acctgacagtgattaactgggtcaaaggacgaaattttaaatgattaa 11741854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 210 - 249
Target Start/End: Complemental strand, 33871469 - 33871430
Alignment:
Q  210 gtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  33871469 gtgattaagttggtcaaaggacgaaattttaaatgattaa 33871430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 249
Target Start/End: Complemental strand, 35920357 - 35920319
Alignment:
Q  211 tgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  35920357 tgattaagttggtcaaaggacgaaattttaaatgattaa 35920319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 3529005 - 3528964
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  |||| |||||||||||||||||    
T  3529005 cagtgattaagttggtcaaaggactaaattttaaatgattaa 3528964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 6301839 - 6301880
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||| |||||||  ||||||||||||||||||||||    
T  6301839 cagtgattaaattggtcaaaggacgaaattttaaatgattaa 6301880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 8875581 - 8875540
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  | ||||||||||||||||||||    
T  8875581 cagtgattaagttggtcaaagaacgaaattttaaatgattaa 8875540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 11762013 - 11762054
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  |||| |||||||||||||||||    
T  11762013 cagtgattaagttggtcaaaggactaaattttaaatgattaa 11762054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 13963125 - 13963166
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  | ||||||||||||||||||||    
T  13963125 cagtgattaagttggtcaaagaacgaaattttaaatgattaa 13963166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 17202695 - 17202736
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||   |||||||||||||||||||||    
T  17202695 cagtgattaagttggtcaaatgacgaaattttaaatgattaa 17202736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 19892440 - 19892399
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||| |||  ||||||||||||||||||||||    
T  19892440 cagtgattaagttgatcaaaggacgaaattttaaatgattaa 19892399  T

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Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 20153212 - 20153253
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  ||| ||||||||||||||||||    
T  20153212 cagtgattaagttggtcaaaggatgaaattttaaatgattaa 20153253  T

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Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 20814267 - 20814226
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||| |  ||||||||||||||||||||||    
T  20814267 cagtgattaagttggttaaaggacgaaattttaaatgattaa 20814226  T

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Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 21265275 - 21265234
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  |||||||||||||||| |||||    
T  21265275 cagtgattaagttggtcaaaggacgaaattttaaataattaa 21265234  T

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Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 27587411 - 27587452
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  |||| |||||||||||||||||    
T  27587411 cagtgattaagttggtcaaaggactaaattttaaatgattaa 27587452  T

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Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 27937185 - 27937144
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||   |||||||||||||||||||||    
T  27937185 cagtgattaagttggtcaaatgacgaaattttaaatgattaa 27937144  T

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Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 32242538 - 32242579
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  |||| |||||||||||||||||    
T  32242538 cagtgattaagttggtcaaaggacaaaattttaaatgattaa 32242579  T

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Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 33871632 - 33871673
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||   |||||||||||||||||||||    
T  33871632 cagtgattaagttggtcaaatgacgaaattttaaatgattaa 33871673  T

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Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 38475165 - 38475124
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||   |||||||||||||||||||||    
T  38475165 cagtgattaagttggtcaaatgacgaaattttaaatgattaa 38475124  T

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Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 5024151 - 5024111
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgatta 248  Q
    ||||||||||||||||||  |||| ||||||||||||||||    
T  5024151 cagtgattaagttggtcaaaggacaaaattttaaatgatta 5024111  T

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Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 17544183 - 17544139
Alignment:
Q  205 tgacagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||||||   ||| |||||||||||||||||    
T  17544183 tgacagtgattaagttggtcaaatgacaaaattttaaatgattaa 17544139  T

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Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 21287874 - 21287834
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||   |||||||||||||||||||||    
T  21287874 agtgattaagttggtcaaatgacgaaattttaaatgattaa 21287834  T

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Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 22298673 - 22298633
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||  ||| ||||||||||||||||||    
T  22298673 agtgattaagttggtcaaaggatgaaattttaaatgattaa 22298633  T

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Target: scaffold0599 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 2524 - 2484
Alignment:
Q  209 agtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  2524 agtgattaagttggtcaaaggacgaaattttaaatgattaa 2484  T

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Target: scaffold0347 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 149
Target Start/End: Original strand, 14463 - 14509
Alignment:
Q  103 gagggaagattttgagaagatgaacacatgggcttaatggtcttttc 149  Q
    |||||||||||||||||||||| ||||| |||  |||||||||||||    
T  14463 gagggaagattttgagaagatggacacaggggtataatggtcttttc 14509  T

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Target: scaffold0295 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 2439 - 2480
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    ||||||||||||||||||  || |||||||||||||||||||    
T  2439 cagtgattaagttggtcaaagggcgaaattttaaatgattaa 2480  T

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Target: scaffold0031 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 69261 - 69302
Alignment:
Q  208 cagtgattaagttggtcatgggacgaaattttaaatgattaa 249  Q
    |||||||||||||||| |  ||||||||||||||||||||||    
T  69261 cagtgattaagttggttaaaggacgaaattttaaatgattaa 69302  T

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