View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16568_high_3 (Length: 290)
Name: NF16568_high_3
Description: NF16568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16568_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 16951233 - 16950954
Alignment:
| Q |
1 |
aggacttgaagttatgttatcagacttaaatgccaccggattccaacatggataagtccatggaggagcagagtaataatgaagcgaatgtaaaggaatt |
100 |
Q |
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| T |
16951233 |
aggacttgaagttatgttatcagacttaaatgccactggattccaacatggataagtccatggaggagcagagtaataatgaagcgaatgtaaaggaatt |
16951134 |
T |
|
| Q |
101 |
aagccattgcattgtggtgtcaaagtcaaaccaacatgctctattccactttctgaatactccatttccccggattcagcagctctcacagaagagctgg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16951133 |
aagccattgcattgtggtgtcaaagtcaaaccaacatgctctattccactttctgaatactccatttccccggattcagcagctctcacagaagagctgg |
16951034 |
T |
|
| Q |
201 |
aagagttctcaatatcctctttgacagtagaagagtccatttcaatttttctatggcccttgagatttaacacaggttct |
280 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
16951033 |
aagagttctcaatatcctctttgacagtagaagagtccatttcaatttttctatggcccttgagatttaacacagtttct |
16950954 |
T |
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