View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16569_high_115 (Length: 206)
Name: NF16569_high_115
Description: NF16569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16569_high_115 |
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Alignment Details
Target: chr2 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 24 - 195
Target Start/End: Original strand, 44695132 - 44695303
Alignment:
| Q |
24 |
ggaaggtctcaaattcatatcatcttgtatacaccaaagagcaactttaagagcagtcacaacactttcatctttctcatcaatatctatcttttggtca |
123 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
44695132 |
ggaaggtctcaaattcatatcatcttgtatacaccaaagagcaactttaagagcagtcacaacactttcatctttatcatcaatatctatcttttggtca |
44695231 |
T |
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| Q |
124 |
ataacttctcttatttttccttcctccatcattcttgatacataagaaggaaaatgtgctttctctgctcct |
195 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44695232 |
ataacttctcttatttttccttcctccatcattcttgatacataagaaggaaaatgtgctttctctgctcct |
44695303 |
T |
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