View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16569_high_39 (Length: 379)

Name: NF16569_high_39
Description: NF16569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16569_high_39
NF16569_high_39
[»] chr2 (47 HSPs)
chr2 (15-235)||(36143145-36143365)
chr2 (261-361)||(36143031-36143130)
chr2 (16-97)||(11796775-11796857)
chr2 (53-97)||(16111170-16111214)
chr2 (28-96)||(1366389-1366459)
chr2 (121-219)||(30392799-30392898)
chr2 (133-219)||(32857914-32858001)
chr2 (16-96)||(37199564-37199646)
chr2 (49-96)||(38910702-38910749)
chr2 (26-97)||(7939353-7939426)
chr2 (121-225)||(22653605-22653710)
chr2 (57-97)||(5475141-5475181)
chr2 (53-97)||(11563823-11563867)
chr2 (53-97)||(34248066-34248110)
chr2 (276-308)||(36143013-36143045)
chr2 (53-97)||(37009021-37009065)
chr2 (123-179)||(38249174-38249230)
chr2 (191-222)||(25622223-25622254)
chr2 (55-97)||(3044954-3044996)
chr2 (121-179)||(4562760-4562818)
chr2 (55-97)||(8313682-8313724)
chr2 (55-97)||(10357126-10357168)
chr2 (183-225)||(15939356-15939398)
chr2 (172-221)||(18254644-18254694)
chr2 (55-97)||(20894286-20894328)
chr2 (55-97)||(40947458-40947500)
chr2 (55-97)||(44332388-44332430)
chr2 (27-97)||(6229860-6229932)
chr2 (55-96)||(7939999-7940040)
chr2 (55-96)||(13873991-13874032)
chr2 (55-96)||(14014116-14014157)
chr2 (121-178)||(18278426-18278483)
chr2 (49-110)||(20893217-20893278)
chr2 (27-97)||(22298226-22298298)
chr2 (184-225)||(32854600-32854641)
chr2 (16-110)||(33476521-33476617)
chr2 (55-96)||(41078164-41078205)
chr2 (16-97)||(3045563-3045646)
chr2 (121-181)||(5474910-5474970)
chr2 (49-97)||(16110507-16110555)
chr2 (52-100)||(20126061-20126109)
chr2 (184-224)||(20497157-20497197)
chr2 (144-219)||(24439693-24439769)
chr2 (16-97)||(31597251-31597334)
chr2 (53-97)||(32875183-32875227)
chr2 (49-93)||(35899818-35899862)
chr2 (49-93)||(38973144-38973188)
[»] chr1 (49 HSPs)
chr1 (27-97)||(27225702-27225774)
chr1 (121-228)||(6702580-6702688)
chr1 (16-97)||(45738026-45738109)
chr1 (26-96)||(1114857-1114929)
chr1 (49-97)||(25068351-25068399)
chr1 (16-97)||(36604753-36604836)
chr1 (55-97)||(8061052-8061094)
chr1 (55-97)||(38011859-38011901)
chr1 (55-97)||(41321539-41321581)
chr1 (55-96)||(19071739-19071780)
chr1 (55-96)||(19119629-19119670)
chr1 (191-228)||(34824243-34824280)
chr1 (16-93)||(4007583-4007662)
chr1 (49-97)||(25813048-25813096)
chr1 (53-93)||(29344551-29344591)
chr1 (133-225)||(29527130-29527222)
chr1 (49-97)||(41322195-41322243)
chr1 (53-93)||(41575846-41575886)
chr1 (27-96)||(49129651-49129722)
chr1 (55-107)||(50144057-50144109)
chr1 (49-97)||(52505974-52506022)
chr1 (135-225)||(15775757-15775848)
chr1 (57-96)||(18407209-18407248)
chr1 (55-98)||(42831207-42831250)
chr1 (55-93)||(794753-794791)
chr1 (121-179)||(4482606-4482664)
chr1 (55-97)||(4601709-4601751)
chr1 (55-97)||(16536398-16536440)
chr1 (55-97)||(18406556-18406598)
chr1 (121-179)||(18534005-18534063)
chr1 (121-179)||(30360416-30360474)
chr1 (49-107)||(38011187-38011245)
chr1 (55-97)||(43504464-43504506)
chr1 (121-179)||(43884798-43884856)
chr1 (54-96)||(44645288-44645330)
chr1 (55-97)||(45737331-45737373)
chr1 (16-107)||(47233076-47233169)
chr1 (56-97)||(1846546-1846587)
chr1 (121-178)||(13773172-13773229)
chr1 (184-225)||(18512536-18512577)
chr1 (133-225)||(27579435-27579528)
chr1 (27-97)||(33126829-33126901)
chr1 (55-96)||(36605406-36605447)
chr1 (133-181)||(923110-923158)
chr1 (49-97)||(20585114-20585162)
chr1 (57-97)||(27521945-27521985)
chr1 (57-97)||(27931313-27931353)
chr1 (49-97)||(45195135-45195183)
chr1 (53-97)||(45738674-45738718)
[»] chr7 (48 HSPs)
chr7 (16-97)||(22711661-22711744)
chr7 (144-219)||(12428217-12428294)
chr7 (47-96)||(40344434-40344483)
chr7 (53-97)||(10412559-10412603)
chr7 (49-97)||(38670022-38670070)
chr7 (121-179)||(30806119-30806177)
chr7 (55-96)||(29823358-29823399)
chr7 (16-110)||(38987766-38987862)
chr7 (49-97)||(317957-318005)
chr7 (49-97)||(6185332-6185380)
chr7 (49-97)||(6191848-6191896)
chr7 (15-96)||(11696237-11696320)
chr7 (49-97)||(25606951-25606999)
chr7 (57-97)||(29615543-29615583)
chr7 (20-97)||(40401520-40401599)
chr7 (49-96)||(25946-25993)
chr7 (49-96)||(29824029-29824076)
chr7 (55-98)||(34999211-34999254)
chr7 (16-96)||(36688824-36688906)
chr7 (54-97)||(42813583-42813626)
chr7 (55-97)||(25283-25325)
chr7 (55-97)||(317305-317347)
chr7 (55-97)||(2146063-2146105)
chr7 (55-97)||(3341446-3341488)
chr7 (55-97)||(5228644-5228686)
chr7 (55-97)||(11639923-11639965)
chr7 (55-93)||(12677130-12677168)
chr7 (121-218)||(15716654-15716751)
chr7 (55-97)||(20261587-20261629)
chr7 (121-179)||(21066890-21066948)
chr7 (151-228)||(27162253-27162331)
chr7 (55-97)||(27619639-27619681)
chr7 (125-179)||(27633939-27633993)
chr7 (55-97)||(33869220-33869262)
chr7 (55-97)||(38670689-38670731)
chr7 (55-97)||(38790099-38790141)
chr7 (55-97)||(40400929-40400971)
chr7 (55-96)||(6184680-6184720)
chr7 (141-217)||(10690871-10690948)
chr7 (53-110)||(22263777-22263834)
chr7 (55-96)||(25607617-25607658)
chr7 (126-179)||(30004557-30004610)
chr7 (57-97)||(1573105-1573145)
chr7 (49-97)||(2146874-2146922)
chr7 (53-97)||(2935764-2935808)
chr7 (182-222)||(2996590-2996630)
chr7 (53-97)||(32388151-32388195)
chr7 (55-107)||(48982544-48982596)
[»] chr6 (49 HSPs)
chr6 (20-97)||(12767575-12767654)
chr6 (27-97)||(21802580-21802652)
chr6 (16-97)||(14306818-14306901)
chr6 (49-107)||(22268527-22268585)
chr6 (55-97)||(25527756-25527798)
chr6 (55-96)||(6936402-6936443)
chr6 (27-97)||(21847345-21847417)
chr6 (126-178)||(2500523-2500575)
chr6 (49-97)||(9241539-9241587)
chr6 (49-97)||(11523477-11523525)
chr6 (49-97)||(14873697-14873745)
chr6 (49-97)||(27923749-27923797)
chr6 (49-97)||(34709917-34709965)
chr6 (16-96)||(2092302-2092384)
chr6 (49-96)||(3767092-3767139)
chr6 (55-110)||(4125890-4125945)
chr6 (53-96)||(9240886-9240929)
chr6 (55-110)||(12026203-12026258)
chr6 (54-97)||(25528422-25528465)
chr6 (29-97)||(34250686-34250756)
chr6 (49-96)||(34280043-34280090)
chr6 (54-97)||(34794527-34794570)
chr6 (55-97)||(188439-188481)
chr6 (55-97)||(2522695-2522737)
chr6 (133-179)||(7072094-7072140)
chr6 (55-97)||(11522826-11522868)
chr6 (55-97)||(12033123-12033165)
chr6 (59-97)||(14224500-14224538)
chr6 (121-175)||(14579298-14579352)
chr6 (59-97)||(17312108-17312146)
chr6 (55-97)||(21801965-21802007)
chr6 (55-97)||(22022280-22022322)
chr6 (121-179)||(29284270-29284328)
chr6 (54-95)||(2091716-2091757)
chr6 (121-225)||(3294768-3294873)
chr6 (124-228)||(5694921-5695025)
chr6 (184-225)||(18904333-18904374)
chr6 (141-229)||(31104906-31104994)
chr6 (184-225)||(32621543-32621584)
chr6 (49-97)||(187796-187844)
chr6 (49-97)||(4100649-4100697)
chr6 (49-97)||(4126011-4126059)
chr6 (57-97)||(7448255-7448295)
chr6 (20-97)||(10702903-10702982)
chr6 (49-97)||(12025543-12025591)
chr6 (49-97)||(12767065-12767113)
chr6 (57-97)||(14313857-14313897)
chr6 (57-97)||(14873044-14873084)
chr6 (55-107)||(25577207-25577259)
[»] chr5 (53 HSPs)
chr5 (16-97)||(20183978-20184061)
chr5 (125-211)||(29499183-29499270)
chr5 (53-96)||(42598991-42599034)
chr5 (184-225)||(33909073-33909114)
chr5 (121-225)||(42320321-42320426)
chr5 (49-97)||(4055408-4055456)
chr5 (141-228)||(16745105-16745193)
chr5 (126-209)||(32392103-32392187)
chr5 (55-97)||(4877380-4877422)
chr5 (27-97)||(31850031-31850103)
chr5 (49-97)||(8572726-8572774)
chr5 (16-97)||(8573313-8573396)
chr5 (53-97)||(9017674-9017718)
chr5 (49-97)||(20540981-20541029)
chr5 (49-97)||(20570827-20570875)
chr5 (49-97)||(20691141-20691189)
chr5 (49-97)||(24624844-24624892)
chr5 (123-175)||(32389646-32389698)
chr5 (53-97)||(36737452-36737496)
chr5 (49-97)||(37333930-37333978)
chr5 (49-97)||(37657408-37657456)
chr5 (55-107)||(37658080-37658132)
chr5 (133-219)||(546818-546905)
chr5 (121-219)||(8241054-8241153)
chr5 (49-100)||(30782840-30782891)
chr5 (54-97)||(31476969-31477012)
chr5 (121-179)||(2328596-2328654)
chr5 (18-97)||(10687615-10687696)
chr5 (55-97)||(13685995-13686037)
chr5 (55-97)||(19408566-19408608)
chr5 (55-97)||(20570155-20570197)
chr5 (30-97)||(36762141-36762210)
chr5 (121-179)||(38642205-38642263)
chr5 (121-179)||(39919101-39919159)
chr5 (121-179)||(42525404-42525462)
chr5 (184-225)||(3741022-3741063)
chr5 (27-97)||(3933954-3934026)
chr5 (184-225)||(6734700-6734741)
chr5 (121-213)||(39147731-39147824)
chr5 (15-100)||(141582-141669)
chr5 (57-97)||(6029481-6029521)
chr5 (49-97)||(9119547-9119595)
chr5 (58-110)||(13686630-13686682)
chr5 (27-96)||(14594097-14594168)
chr5 (16-97)||(15145043-15145126)
chr5 (53-97)||(15175232-15175276)
chr5 (53-97)||(17781049-17781092)
chr5 (121-181)||(22228968-22229028)
chr5 (49-97)||(22730516-22730564)
chr5 (57-97)||(27979258-27979298)
chr5 (49-97)||(31850659-31850707)
chr5 (57-97)||(38497355-38497395)
chr5 (57-97)||(40957422-40957462)
[»] chr4 (77 HSPs)
chr4 (28-97)||(51019678-51019749)
chr4 (121-219)||(39697830-39697928)
chr4 (55-97)||(55815003-55815045)
chr4 (29-97)||(25010035-25010105)
chr4 (53-96)||(30192537-30192580)
chr4 (15-97)||(46076376-46076459)
chr4 (55-97)||(13482210-13482252)
chr4 (121-218)||(42395231-42395329)
chr4 (55-97)||(46095433-46095475)
chr4 (55-97)||(47030488-47030530)
chr4 (133-178)||(10042427-10042472)
chr4 (27-97)||(21037325-21037397)
chr4 (48-97)||(29429698-29429747)
chr4 (121-225)||(34932499-34932604)
chr4 (121-225)||(39696299-39696403)
chr4 (56-97)||(56310073-56310114)
chr4 (49-97)||(615461-615509)
chr4 (55-107)||(6233109-6233161)
chr4 (49-97)||(7165423-7165471)
chr4 (49-97)||(12250701-12250749)
chr4 (49-97)||(13392751-13392799)
chr4 (53-97)||(13395216-13395260)
chr4 (49-97)||(13395890-13395938)
chr4 (49-97)||(23309478-23309526)
chr4 (126-178)||(27103110-27103162)
chr4 (124-180)||(41871261-41871317)
chr4 (49-97)||(47029844-47029892)
chr4 (183-222)||(5803543-5803582)
chr4 (54-97)||(23265789-23265832)
chr4 (54-97)||(23308825-23308868)
chr4 (27-107)||(32448916-32448998)
chr4 (144-179)||(34760848-34760883)
chr4 (55-110)||(47931236-47931291)
chr4 (55-110)||(55068857-55068912)
chr4 (55-97)||(616137-616179)
chr4 (55-97)||(796410-796452)
chr4 (47-97)||(4649698-4649747)
chr4 (55-97)||(8192996-8193038)
chr4 (121-179)||(9661554-9661612)
chr4 (121-179)||(10417229-10417287)
chr4 (55-97)||(16192321-16192363)
chr4 (55-97)||(17722777-17722819)
chr4 (55-97)||(19313372-19313414)
chr4 (181-219)||(23241581-23241619)
chr4 (55-97)||(23269195-23269237)
chr4 (55-97)||(23722057-23722099)
chr4 (55-97)||(26705675-26705717)
chr4 (55-97)||(35667289-35667331)
chr4 (55-97)||(35667572-35667614)
chr4 (55-97)||(35667762-35667804)
chr4 (54-96)||(38720624-38720666)
chr4 (55-97)||(41919914-41919956)
chr4 (121-219)||(43978012-43978110)
chr4 (55-96)||(4949962-4950003)
chr4 (121-225)||(6371118-6371223)
chr4 (27-97)||(7479322-7479394)
chr4 (48-97)||(7796973-7797022)
chr4 (121-225)||(26919429-26919534)
chr4 (55-96)||(33047235-33047276)
chr4 (184-225)||(36099144-36099185)
chr4 (26-96)||(56309442-56309514)
chr4 (53-97)||(721349-721393)
chr4 (55-107)||(721985-722037)
chr4 (49-93)||(796991-797035)
chr4 (49-97)||(6232448-6232496)
chr4 (16-97)||(6711259-6711342)
chr4 (126-225)||(13161756-13161855)
chr4 (56-96)||(13772389-13772429)
chr4 (49-97)||(18362697-18362745)
chr4 (57-97)||(20545026-20545066)
chr4 (53-97)||(28464228-28464272)
chr4 (53-97)||(35667385-35667429)
chr4 (49-97)||(36600181-36600229)
chr4 (53-97)||(37147766-37147810)
chr4 (143-179)||(38413560-38413596)
chr4 (49-97)||(46096119-46096167)
chr4 (49-97)||(46138620-46138668)
[»] chr3 (62 HSPs)
chr3 (16-97)||(1262426-1262509)
chr3 (48-96)||(30605344-30605392)
chr3 (55-97)||(27255314-27255356)
chr3 (55-96)||(4757025-4757066)
chr3 (121-225)||(8964737-8964842)
chr3 (121-225)||(31586951-31587056)
chr3 (48-97)||(44500041-44500090)
chr3 (27-96)||(49079989-49080058)
chr3 (27-97)||(54403588-54403660)
chr3 (49-97)||(4757127-4757175)
chr3 (49-97)||(11056559-11056607)
chr3 (49-97)||(14600406-14600454)
chr3 (49-97)||(22130396-22130444)
chr3 (49-97)||(23308965-23309013)
chr3 (54-97)||(1263063-1263106)
chr3 (16-97)||(11397616-11397699)
chr3 (29-97)||(13623204-13623274)
chr3 (121-219)||(15975156-15975255)
chr3 (57-96)||(16067254-16067293)
chr3 (55-110)||(41587316-41587371)
chr3 (55-97)||(2756612-2756654)
chr3 (55-97)||(4558061-4558103)
chr3 (126-219)||(4640447-4640541)
chr3 (121-179)||(8762088-8762146)
chr3 (55-97)||(10887739-10887781)
chr3 (55-97)||(11345364-11345406)
chr3 (121-179)||(11820008-11820066)
chr3 (121-179)||(18194342-18194400)
chr3 (55-97)||(18364659-18364701)
chr3 (55-97)||(18365286-18365328)
chr3 (55-97)||(45241230-45241272)
chr3 (121-219)||(52945899-52945997)
chr3 (55-97)||(54605791-54605833)
chr3 (121-179)||(54769838-54769896)
chr3 (184-225)||(25883949-25883990)
chr3 (184-225)||(27329893-27329934)
chr3 (121-225)||(31528919-31529024)
chr3 (183-228)||(37076239-37076284)
chr3 (55-96)||(37183108-37183149)
chr3 (49-110)||(37183759-37183820)
chr3 (121-225)||(39719939-39720044)
chr3 (121-201)||(42496355-42496435)
chr3 (184-225)||(51879163-51879204)
chr3 (49-102)||(54606320-54606373)
chr3 (193-225)||(2106101-2106133)
chr3 (55-107)||(3089769-3089821)
chr3 (49-97)||(4558738-4558786)
chr3 (49-97)||(7725405-7725453)
chr3 (49-93)||(10888403-10888447)
chr3 (49-97)||(11388969-11389017)
chr3 (53-97)||(27255977-27256021)
chr3 (49-97)||(27395074-27395122)
chr3 (133-216)||(29559644-29559728)
chr3 (162-225)||(36472392-36472456)
chr3 (121-229)||(39300388-39300495)
chr3 (165-225)||(39709087-39709147)
chr3 (16-97)||(40036360-40036443)
chr3 (49-97)||(41865006-41865054)
chr3 (53-97)||(48223589-48223633)
chr3 (53-97)||(48224140-48224184)
chr3 (53-97)||(49764519-49764563)
chr3 (49-97)||(54404127-54404175)
[»] scaffold0004 (1 HSPs)
scaffold0004 (16-96)||(351296-351378)
[»] scaffold0068 (1 HSPs)
scaffold0068 (27-97)||(59287-59359)
[»] chr8 (47 HSPs)
chr8 (53-98)||(24778016-24778061)
chr8 (27-93)||(37266118-37266186)
chr8 (16-96)||(14879550-14879632)
chr8 (18-97)||(44284317-44284398)
chr8 (53-97)||(14880192-14880236)
chr8 (49-97)||(25597802-25597850)
chr8 (49-97)||(29636386-29636434)
chr8 (53-97)||(32904223-32904267)
chr8 (27-96)||(40791076-40791147)
chr8 (26-110)||(5551569-5551655)
chr8 (121-207)||(8698559-8698646)
chr8 (55-98)||(11140122-11140165)
chr8 (16-96)||(17564698-17564780)
chr8 (55-110)||(25598463-25598518)
chr8 (54-97)||(34679929-34679972)
chr8 (121-179)||(94519-94577)
chr8 (121-179)||(1632448-1632506)
chr8 (55-97)||(3075335-3075377)
chr8 (56-110)||(8442672-8442726)
chr8 (55-97)||(11760073-11760115)
chr8 (179-229)||(13105154-13105204)
chr8 (55-97)||(14363804-14363846)
chr8 (121-179)||(22274619-22274677)
chr8 (55-97)||(22934318-22934360)
chr8 (20-97)||(36016729-36016807)
chr8 (55-97)||(39998399-39998441)
chr8 (121-179)||(43283974-43284032)
chr8 (26-100)||(8438542-8438618)
chr8 (55-96)||(25485432-25485473)
chr8 (184-225)||(31024362-31024403)
chr8 (184-225)||(33810708-33810749)
chr8 (121-225)||(33838328-33838433)
chr8 (184-225)||(34873154-34873195)
chr8 (184-225)||(36035140-36035181)
chr8 (53-110)||(37837581-37837638)
chr8 (184-225)||(44053401-44053442)
chr8 (57-97)||(6099484-6099524)
chr8 (57-97)||(6293205-6293245)
chr8 (49-97)||(8297128-8297176)
chr8 (53-93)||(8297806-8297846)
chr8 (16-97)||(8443290-8443373)
chr8 (49-93)||(10215485-10215529)
chr8 (20-97)||(14094119-14094198)
chr8 (53-93)||(24809616-24809656)
chr8 (53-97)||(32905331-32905375)
chr8 (57-97)||(41312388-41312428)
chr8 (49-93)||(44283726-44283770)
[»] scaffold2113 (1 HSPs)
scaffold2113 (55-97)||(753-795)
[»] scaffold0460 (1 HSPs)
scaffold0460 (49-95)||(13485-13531)
[»] scaffold0368 (1 HSPs)
scaffold0368 (55-98)||(11263-11306)
[»] scaffold0608 (1 HSPs)
scaffold0608 (121-179)||(8970-9028)
[»] scaffold0289 (2 HSPs)
scaffold0289 (55-97)||(3435-3477)
scaffold0289 (53-97)||(4051-4095)
[»] scaffold0189 (1 HSPs)
scaffold0189 (55-97)||(11316-11358)
[»] scaffold0115 (1 HSPs)
scaffold0115 (49-107)||(33344-33402)
[»] scaffold0105 (1 HSPs)
scaffold0105 (55-97)||(19652-19694)
[»] scaffold0098 (1 HSPs)
scaffold0098 (48-97)||(34313-34362)
[»] scaffold0003 (1 HSPs)
scaffold0003 (55-96)||(421175-421216)
[»] scaffold0695 (1 HSPs)
scaffold0695 (20-97)||(2250-2329)
[»] scaffold0102 (1 HSPs)
scaffold0102 (53-97)||(27006-27050)
[»] scaffold0067 (1 HSPs)
scaffold0067 (49-97)||(18742-18790)
[»] scaffold0043 (1 HSPs)
scaffold0043 (27-100)||(67739-67814)


Alignment Details
Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 15 - 235
Target Start/End: Complemental strand, 36143365 - 36143145
Alignment:
Q  15 cataggggagaagagtataaatgttagttttcaagagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaagtttatttgagaggcaga 114  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36143365 cataggagagaagagtataaatgttagttttcaagagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaagtttatttgagaggcaga 36143266  T
Q  115 agagtctgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaactcaaacacccaacttcttcacatttaaaatgtatg 214  Q
    |||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36143265 agagcctgagtttagctcagttggtcgggatattgcatattatacgtaggagtcggagttcgaacccaaacacccaacttcttcacatttaaaatgtatg 36143166  T
Q  215 agctccagccattatattgat 235  Q
    |||||  | ||||||||||||    
T  36143165 agctctggtcattatattgat 36143145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 261 - 361
Target Start/End: Complemental strand, 36143130 - 36143031
Alignment:
Q  261 tacagacaagtgaacattaaggtgtatatttcaatagaaagaagtgtaccattagattgatccaaaaataaaagttacagacaaatattaaggtgtatat 360  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  36143130 tacagacaagtgaacattaag-tgtatatttcaatagaaagaagtgtgccattaaattgatccaaaaataaaagttacagacaaatattaaggtgtatat 36143032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 11796775 - 11796857
Alignment:
Q  16 ataggggagaagagtataaatgttagttttcaag-agtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||  |||||||||| ||| |||||||| || ||| ||||||||||||| |||||| ||||| ||||||||||||||    
T  11796775 ataggggaggggagtataaattttacttttcaaggagggaaatgtatattttaacttaagaggggaggggagtgtaattcaag 11796857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 16111170 - 16111214
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||    
T  16111170 gaagtgtatattttaacttaagagtggaggggagtgtaattcaag 16111214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 1366389 - 1366459
Alignment:
Q  28 agtataaatgttagttttcaagagtg--aagtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    ||||||||| ||| |||||||||| |  || ||||||||||||| |||||| |||||||||||||||||||    
T  1366389 agtataaattttacttttcaagagagggaaatgtatattttaacataagagaggaggagagtgtaattcaa 1366459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 219
Target Start/End: Complemental strand, 30392898 - 30392799
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaa-ctcaaacacccaacttcttcacatttaaaatgtatgagctc 219  Q
    |||| |||||| ||||||| |||||||| ||||||||| ||||||||||| ||||||| | || |||| | |||| |||||| ||||| ||| |||||||    
T  30392898 tgagcttagctcagttggtagggatattgcatattatatgtaggagtcggggttcgaaccccagacactccacttgttcacaattaaattgtgtgagctc 30392799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 219
Target Start/End: Complemental strand, 32858001 - 32857914
Alignment:
Q  133 agttggtcgggatattacatattatacgtaggagtcggagttcgaact-caaacacccaacttcttcacatttaaaatgtatgagctc 219  Q
    ||||||| |||||||||||||||| | | | | ||| ||||||||||  |||||||||||||||| ||||||||| |||| |||||||    
T  32858001 agttggtagggatattacatattacatgcatgtgtctgagttcgaaccacaaacacccaacttctccacatttaatatgtgtgagctc 32857914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 37199564 - 37199646
Alignment:
Q  16 ataggggagaagagtataaatgttagttttcaag--agtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    |||||||||  |||||||||| ||| ||||||||  || | ||||||||||||||| |||||| ||||| |||||||||||||    
T  37199564 ataggggaggggagtataaattttacttttcaagggaggggagtgtatattttaacataagaggggaggggagtgtaattcaa 37199646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 38910749 - 38910702
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    ||||||||||||||||||||| |||||| ||||| |||||||||||||    
T  38910749 gagtgaagtgtatattttaacataagagaggaggggagtgtaattcaa 38910702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 7939426 - 7939353
Alignment:
Q  26 agagtataaatgttagttttcaagagtg--aagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||| ||| |||||||| | |  |||||||||||||||| |||||| | ||||||||||||||||||    
T  7939426 agagtataaattttacttttcaagggaggtaagtgtatattttaacataagagggaaggagagtgtaattcaag 7939353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 22653710 - 22653605
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaactcaa-acacccaacttcttcacatttaaaatgtatgagctc 219  Q
    |||| |||||| ||||||| |||||||| ||||||||| | ||||||||| |||||||| |   |||| | |||||| |||| ||||| |||||||||||    
T  22653710 tgagcttagctcagttggtagggatattgcatattatatgcaggagtcggggttcgaaccccggacactccacttctccacaattaaattgtatgagctc 22653611  T
Q  220 cagcca 225  Q
     |||||    
T  22653610 tagcca 22653605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 5475141 - 5475181
Alignment:
Q  57 tgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||| |||||| ||||||||||||||||||||    
T  5475141 tgtatattttaacataagaggggaggagagtgtaattcaag 5475181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 11563867 - 11563823
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||| |||||| ||| ||||||||||||||||    
T  11563867 gaagtgtatattttaacataagaggggatgagagtgtaattcaag 11563823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 34248066 - 34248110
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||| |||||| ||||| ||||||||||||||    
T  34248066 gaagtgtatattttaacttaagaggggaggggagtgtaattcaag 34248110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 308
Target Start/End: Complemental strand, 36143045 - 36143013
Alignment:
Q  276 attaaggtgtatatttcaatagaaagaagtgta 308  Q
    |||||||||||||||||||||||||||||||||    
T  36143045 attaaggtgtatatttcaatagaaagaagtgta 36143013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 37009065 - 37009021
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||| |||||| ||||| ||||||||||||||    
T  37009065 gaagtgtatattttaacataagaggggaggggagtgtaattcaag 37009021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 38249174 - 38249230
Alignment:
Q  123 agtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac 179  Q
    ||||||| ||||||||| | |||||||||||||||| ||| | ||||||||||||||    
T  38249174 agtttagtttagttggtagagatattacatattatatgtatgtgtcggagttcgaac 38249230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 222
Target Start/End: Complemental strand, 25622254 - 25622223
Alignment:
Q  191 acttcttcacatttaaaatgtatgagctccag 222  Q
    ||||||||||||||||||||||||||||||||    
T  25622254 acttcttcacatttaaaatgtatgagctccag 25622223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 3044996 - 3044954
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| ||||||  |||||||||||||||||||    
T  3044996 agtgtatattttaacataagaggtgaggagagtgtaattcaag 3044954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 4562818 - 4562760
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac 179  Q
    ||||||||||| ||||||| |||||||| ||||||||| | ||||| ||| ||||||||    
T  4562818 tgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaac 4562760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 8313724 - 8313682
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  8313724 agtgtatattttaacataagaggggaggggagtgtaattcaag 8313682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 10357126 - 10357168
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  10357126 agtgtatattttaacataagaggggaggggagtgtaattcaag 10357168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 225
Target Start/End: Original strand, 15939356 - 15939398
Alignment:
Q  183 aacacccaacttcttcacatttaaaatgtatgagctccagcca 225  Q
    ||||||| |||||| |||||||||||||| |||||||||||||    
T  15939356 aacaccccacttctccacatttaaaatgtgtgagctccagcca 15939398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 18254644 - 18254694
Alignment:
Q  172 gttcgaactcaa-acacccaacttcttcacatttaaaatgtatgagctcca 221  Q
    |||||||||| | |||||| ||||||||||||||||||||| |||||||||    
T  18254644 gttcgaactccagacaccccacttcttcacatttaaaatgtgtgagctcca 18254694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 20894286 - 20894328
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  20894286 agtgtatattttaacttaagaggggaggggagtgtaattcaag 20894328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 40947500 - 40947458
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| ||| || ||||||||||||||||||||    
T  40947500 agtgtatattttaacataaaaggggaggagagtgtaattcaag 40947458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 44332388 - 44332430
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||| ||||||||||||||||    
T  44332388 agtgtatattttaacataagaggggatgagagtgtaattcaag 44332430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 6229860 - 6229932
Alignment:
Q  27 gagtataaatgttagttttcaag--agtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||| ||| ||||||||  || | ||||||||||||||| |||||| | ||| ||||||||||||||    
T  6229860 gagtataaatcttacttttcaagggaggggagtgtatattttaacataagagggaaggggagtgtaattcaag 6229932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 7939999 - 7940040
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    ||||||||||||||| ||| || |||||||||||||||||||    
T  7939999 agtgtatattttaacataaaaggggaggagagtgtaattcaa 7940040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 13873991 - 13874032
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    ||||||||||||||| |||||| |||| ||||||||||||||    
T  13873991 agtgtatattttaacataagagaggagaagagtgtaattcaa 13874032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 14014116 - 14014157
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    ||||||||||||||| |||||| |||| ||||||||||||||    
T  14014116 agtgtatattttaacataagagaggagaagagtgtaattcaa 14014157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 18278483 - 18278426
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaa 178  Q
    ||||||||||| ||||||| |||||||| ||||||||| | ||||| ||| |||||||    
T  18278483 tgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaa 18278426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 110
Target Start/End: Complemental strand, 20893278 - 20893217
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaagtttatttgagagg 110  Q
    |||| |||||||||||||||| |||||| ||||| || |||||||||||  | |||||||||    
T  20893278 gagtaaagtgtatattttaacttaagaggggaggggattgtaattcaagcatctttgagagg 20893217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 22298226 - 22298298
Alignment:
Q  27 gagtataaatgttagttttcaagagtgaag--tgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||| ||| |||||||| | ||||  ||||||||||||| |||||| ||||  ||||||||||||||    
T  22298226 gagtataaattttatttttcaagggagaagagtgtatattttaacataagaggggagaggagtgtaattcaag 22298298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 32854600 - 32854641
Alignment:
Q  184 acacccaacttcttcacatttaaaatgtatgagctccagcca 225  Q
    |||||| |||||| |||||||||||||| |||||||||||||    
T  32854600 acaccctacttctccacatttaaaatgtgtgagctccagcca 32854641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 33476521 - 33476617
Alignment:
Q  16 ataggggagaagagtataaatgttagttttcaagagtga--agtgtatattttaacgtaagagtggaggagagtgtaattcaagtttatttgagagg 110  Q
    ||||||||| ||||| ||||| ||| |||||||||| |   || |||||||||||| |||||| ||||  ||||||||||||||  | |||||||||    
T  33476521 ataggggaggagagtgtaaattttacttttcaagagaggggagcgtatattttaacataagagaggagatgagtgtaattcaagcatttttgagagg 33476617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 41078164 - 41078205
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    ||||||||||||||| |||||| ||||||||||||| |||||    
T  41078164 agtgtatattttaacataagagaggaggagagtgtagttcaa 41078205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 3045563 - 3045646
Alignment:
Q  16 ataggggagaagagtataaatgttagttttcaagagtg--aagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||  |||||||||| ||| |||||||||| |  |||||||||||||||| |||||| | || ||| | |||||||||    
T  3045563 ataggggaggggagtataaattttacttttcaagagagggaagtgtatattttaacataagagggaagaagaatttaattcaag 3045646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 5474910 - 5474970
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaactc 181  Q
    |||| |||||| ||||||  |||||||| ||||||||||| ||||| ||| ||||||||||    
T  5474910 tgagcttagctcagttggcagggatattgcatattatacgcaggagccggggttcgaactc 5474970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 16110555 - 16110507
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||  ||||||||||||||    
T  16110555 gagtaaagtgtatattttaacttaagaggggagaggagtgtaattcaag 16110507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 20126061 - 20126109
Alignment:
Q  52 tgaagtgtatattttaacgtaagagtggaggagagtgtaattcaagttt 100  Q
    ||||||||| |||||||| |||||| ||||| || ||||||||||||||    
T  20126061 tgaagtgtagattttaacataagaggggaggggaatgtaattcaagttt 20126109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 20497197 - 20497157
Alignment:
Q  184 acacccaacttcttcacatttaaaatgtatgagctccagcc 224  Q
    |||||| |||||| |||||||||||||| ||||||||||||    
T  20497197 acaccccacttctccacatttaaaatgtgtgagctccagcc 20497157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 219
Target Start/End: Complemental strand, 24439769 - 24439693
Alignment:
Q  144 atattacatattatacgtaggagtcggagttcgaactc-aaacacccaacttcttcacatttaaaatgtatgagctc 219  Q
    ||||||||| |||||  ||||||| || ||||||| || ||| |||| |||| |||||||||||||||| |||||||    
T  24439769 atattacattttatatttaggagttggggttcgaattccaaataccccacttattcacatttaaaatgtgtgagctc 24439693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 31597334 - 31597251
Alignment:
Q  16 ataggggagaagagtataaatgttagttttcaag--agtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||  |||| ||||| ||| ||||||||  || | ||| ||||||||||| |||||| ||||| ||||||||||||||    
T  31597334 ataggggaggggagtgtaaattttacttttcaagggaggggagtttatattttaacataagaggggaggtgagtgtaattcaag 31597251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 32875227 - 32875183
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||| |||||| | || |||||||||||||||    
T  32875227 gaagtgtatattttaacataagagagaagaagagtgtaattcaag 32875183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 93
Target Start/End: Original strand, 35899818 - 35899862
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaatt 93  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||    
T  35899818 gagtaaagtgtatattttaacttaagaggggaggggagtgtaatt 35899862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 93
Target Start/End: Original strand, 38973144 - 38973188
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaatt 93  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||    
T  38973144 gagtaaagtgtatattttaacttaagaggggaggggagtgtaatt 38973188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 27225774 - 27225702
Alignment:
Q  27 gagtataaatgttagttttcaag--agtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||| ||| ||||||||  || ||||||||||||||||| |||||| ||||||||||||||||||||    
T  27225774 gagtataaattttacttttcaagggagggaagtgtatattttaacataagaggggaggagagtgtaattcaag 27225702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 121 - 228
Target Start/End: Original strand, 6702580 - 6702688
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaactcaa-acacccaacttcttcacatttaaaatgtatgagctc 219  Q
    |||| |||||| ||||||| |||||||| ||||||||| | ||||||||| |||||||| | | |||| | ||||||||||| ||||| ||| |||||||    
T  6702580 tgagcttagctcagttggtagggatattgcatattatatgcaggagtcggggttcgaaccccagacactccacttcttcacaattaaattgtgtgagctc 6702679  T
Q  220 cagccatta 228  Q
     ||||||||    
T  6702680 tagccatta 6702688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 45738109 - 45738026
Alignment:
Q  16 ataggggagaagagtataaatgttagttttcaag--agtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||  |||||||||| ||| |||| |||  || ||||||||||||||||| |||||| ||||||||||||||||||||    
T  45738109 ataggggaggggagtataaattttactttttaagggagggaagtgtatattttaacataagaggggaggagagtgtaattcaag 45738026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 1114857 - 1114929
Alignment:
Q  26 agagtataaatgttagttttcaagagtgaa--gtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    ||||||||||| ||| |||||||| |||||  |||||||||||||| |||||| ||||| |||||||||||||    
T  1114857 agagtataaattttatttttcaagggtgaaaagtgtatattttaacataagaggggaggggagtgtaattcaa 1114929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 25068399 - 25068351
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||||||||||||||||||    
T  25068399 gagtaaagtgtatattttaacttaagaggggaggagagtgtaattcaag 25068351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 36604836 - 36604753
Alignment:
Q  16 ataggggagaagagtataaatgttagttttcaa--gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||| ||||||||||| ||| |||||||  ||| ||||||||||||||||| |||||| | ||  ||||||||||||||    
T  36604836 ataggggaggagagtataaattttacttttcaaaggagggaagtgtatattttaacataagagggaagaggagtgtaattcaag 36604753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 8061094 - 8061052
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  8061094 agtgtatattttaacataagagaggaggagagtgtaattcaag 8061052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 38011859 - 38011901
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||||||||| ||||||||||||||    
T  38011859 agtgtatattttaacttaagagtggaggggagtgtaattcaag 38011901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 41321581 - 41321539
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  41321581 agtgtatattttaacttaagaggggaggagagtgtaattcaag 41321539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 19071780 - 19071739
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    ||||||||||||||| |||||| |||||||||||||||||||    
T  19071780 agtgtatattttaacataagaggggaggagagtgtaattcaa 19071739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 19119670 - 19119629
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    ||||||||||||||| |||||| |||||||||||||||||||    
T  19119670 agtgtatattttaacataagaggggaggagagtgtaattcaa 19119629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 228
Target Start/End: Original strand, 34824243 - 34824280
Alignment:
Q  191 acttcttcacatttaaaatgtatgagctccagccatta 228  Q
    |||||||||||||||| |||||||||||||||||||||    
T  34824243 acttcttcacatttaatatgtatgagctccagccatta 34824280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 4007662 - 4007583
Alignment:
Q  16 ataggggagaagagtataaatgttagttttcaa--gagtgaagtgtatattttaacgtaagagtggaggagagtgtaatt 93  Q
    |||||| ||| |||||||||| ||| |||||||  ||| |  |||||||||||||| |||||| ||||||||||||||||    
T  4007662 atagggaagaggagtataaattttacttttcaaaggagaggggtgtatattttaacataagaggggaggagagtgtaatt 4007583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 25813096 - 25813048
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||||||    
T  25813096 gagtaaagtgtatattttaacttaagaggggaggggagtgtaattcaag 25813048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 29344591 - 29344551
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaatt 93  Q
    ||||||||||||||||| |||||| ||||||||||||||||    
T  29344591 gaagtgtatattttaacataagaggggaggagagtgtaatt 29344551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 225
Target Start/End: Original strand, 29527130 - 29527222
Alignment:
Q  133 agttggtcgggatattacatattatacgtaggagtcggagttcgaactcaaacacccaacttcttcacatttaaaatgtatgagctccagcca 225  Q
    |||||||  |||||||  |||||||| | |||||| ||||||||||| ||||||  | ||| || |||||||||||||| ||||||| |||||    
T  29527130 agttggtatggatattgtatattatatgcaggagttggagttcgaacccaaacattccactcctccacatttaaaatgtgtgagctctagcca 29527222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 41322195 - 41322243
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||||||    
T  41322195 gagtaaagtgtatattttaacttaagaggggaggggagtgtaattcaag 41322243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 41575846 - 41575886
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaatt 93  Q
    ||||||||||||||||| |||||| ||||||||||||||||    
T  41575846 gaagtgtatattttaacataagaggggaggagagtgtaatt 41575886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 49129651 - 49129722
Alignment:
Q  27 gagtataaatgttagttttcaagagtgaag--tgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    |||||||||| ||| |||||||| | ||||  ||||||||||||| |||||| ||||| |||||||||||||    
T  49129651 gagtataaattttatttttcaagggagaagattgtatattttaacataagaggggaggggagtgtaattcaa 49129722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 50144057 - 50144109
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaagtttatttgag 107  Q
    ||||||||||||||| |||||| ||| ||||||||||||||||| | ||||||    
T  50144057 agtgtatattttaacataagaggggatgagagtgtaattcaagtatctttgag 50144109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 52505974 - 52506022
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||||||    
T  52505974 gagtaaagtgtatattttaacttaagaggggaggggagtgtaattcaag 52506022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 15775757 - 15775848
Alignment:
Q  135 ttggtcgggatattacatattatacgtaggagtcggagttcgaa-ctcaaacacccaacttcttcacatttaaaatgtatgagctccagcca 225  Q
    ||||| |||||||| ||||||||| | ||||| ||||||||||| | || |||| |||||||| |||| ||||| ||| ||||||| |||||    
T  15775757 ttggtagggatattgcatattatatgcaggagccggagttcgaaccccagacactcaacttctacacaattaaattgtgtgagctctagcca 15775848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 57 - 96
Target Start/End: Original strand, 18407209 - 18407248
Alignment:
Q  57 tgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  18407209 tgtatattttaacataagaggggaggagagtgtaattcaa 18407248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 98
Target Start/End: Original strand, 42831207 - 42831250
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaagt 98  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||    
T  42831207 agtgtatattttaacataagagcggaggggagtgtaattcaagt 42831250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 93
Target Start/End: Original strand, 794753 - 794791
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaatt 93  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  794753 agtgtatattttaacataagaggggaggagagtgtaatt 794791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 4482664 - 4482606
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac 179  Q
    |||| |||||| ||||||| |||||||| ||||||||| | ||||| ||||||||||||    
T  4482664 tgagcttagctcagttggtagggatattgcatattatatgcaggagccggagttcgaac 4482606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 4601709 - 4601751
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| | ||||||||||||||||||    
T  4601709 agtgtatattttaacataagagggaaggagagtgtaattcaag 4601751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 16536440 - 16536398
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  16536440 agtgtatattttaacataagaggggaggggagtgtaattcaag 16536398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 18406598 - 18406556
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  18406598 agtgtatattttaacataagagaggaggggagtgtaattcaag 18406556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 179
Target Start/End: Original strand, 18534005 - 18534063
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac 179  Q
    |||| |||||| ||||||| | |||||| ||||||||| ||||||||||| ||||||||    
T  18534005 tgagcttagctcagttggtagagatattgcatattatatgtaggagtcggggttcgaac 18534063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 179
Target Start/End: Original strand, 30360416 - 30360474
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac 179  Q
    ||||||||||||||||||| | |||||| ||| ||||| ||||| ||||| ||||||||    
T  30360416 tgagtttagcttagttggtagagatattgcattttatatgtaggggtcggggttcgaac 30360474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 38011245 - 38011187
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaagtttatttgag 107  Q
    |||| |||||||||||||||| |||||| ||||| |||| |||||||||  ||||||||    
T  38011245 gagtaaagtgtatattttaacttaagaggggaggtgagtataattcaagcatatttgag 38011187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 43504464 - 43504506
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| |||||||||| |||||||||    
T  43504464 agtgtatattttaacataagaggggaggagagtataattcaag 43504506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 179
Target Start/End: Original strand, 43884798 - 43884856
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac 179  Q
    ||||||||||| ||||||| |||||||| ||||||||| | ||||| ||| ||||||||    
T  43884798 tgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaac 43884856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 44645330 - 44645288
Alignment:
Q  54 aagtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    |||||||||||||||| |||||| ||| |||||||||||||||    
T  44645330 aagtgtatattttaacataagagaggatgagagtgtaattcaa 44645288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 45737373 - 45737331
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  45737373 agtgtatattttaacataagaggggaggggagtgtaattcaag 45737331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 47233169 - 47233076
Alignment:
Q  16 ataggggagaagagtataaatgttagttttcaag--agtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaagtttatttgag 107  Q
    |||||||||| |||||||||| ||  ||||||||  || | | ||||||||||||| |||||  ||||| ||||||||||||||| | ||||||    
T  47233169 ataggggagaggagtataaattttgcttttcaaggaaggggaatgtatattttaacataagaagggaggggagtgtaattcaagtatctttgag 47233076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 1846546 - 1846587
Alignment:
Q  56 gtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||||||| |||||| ||||| ||||||||||||||    
T  1846546 gtgtatattttaacttaagaggggaggggagtgtaattcaag 1846587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 13773172 - 13773229
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaa 178  Q
    ||||||||||| ||||||| |||||||| ||||||||| | ||||| ||| |||||||    
T  13773172 tgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaa 13773229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 18512577 - 18512536
Alignment:
Q  184 acacccaacttcttcacatttaaaatgtatgagctccagcca 225  Q
    |||||| |||||| |||||||||||||| |||||||||||||    
T  18512577 acaccccacttctccacatttaaaatgtgtgagctccagcca 18512536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 225
Target Start/End: Complemental strand, 27579528 - 27579435
Alignment:
Q  133 agttggtcgggatattacatattatacgtaggagtcggagttcgaactcaa-acacccaacttcttcacatttaaaatgtatgagctccagcca 225  Q
    |||||||  ||||||||||||||||| | ||| | || ||||||||| | | |||||| | |||| |||||||||||||| ||||||| |||||    
T  27579528 agttggtatggatattacatattatatgcaggggccgaagttcgaaccctagacaccccatttctccacatttaaaatgtgtgagctctagcca 27579435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 33126829 - 33126901
Alignment:
Q  27 gagtataaatgttagttttcaagagtg--aagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||| ||| |||||||| | |  |||||||||||||||| ||||| ||||||  |||||||||||||    
T  33126829 gagtataaattttacttttcaagggaggaaagtgtatattttaacataagaatggaggtaagtgtaattcaag 33126901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 36605406 - 36605447
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    ||||||||||||||| |||||| ||||| |||||||||||||    
T  36605406 agtgtatattttaacataagaggggaggggagtgtaattcaa 36605447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 923158 - 923110
Alignment:
Q  133 agttggtcgggatattacatattatacgtaggagtcggagttcgaactc 181  Q
    ||||||| |||||||| ||||||||| | ||||| ||||||||||||||    
T  923158 agttggtagggatattgcatattatatgcaggaggcggagttcgaactc 923110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 20585162 - 20585114
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| ||||||| |||||||| |||||| |||||||| |||||||||||    
T  20585162 gagtaaagtgtagattttaacataagaggggaggagaatgtaattcaag 20585114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 27521945 - 27521985
Alignment:
Q  57 tgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||  |||||| ||||||||||||||||||||    
T  27521945 tgtatattttaatataagaggggaggagagtgtaattcaag 27521985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 27931313 - 27931353
Alignment:
Q  57 tgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||| |||||| ||||| ||||||||||||||    
T  27931313 tgtatattttaacataagaggggaggggagtgtaattcaag 27931353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 45195135 - 45195183
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| ||||||| |||||||| |||||| |||||||| |||||||||||    
T  45195135 gagtaaagtgtagattttaacataagaggggaggagaatgtaattcaag 45195183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 45738674 - 45738718
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||| |||||| ||||  ||||||||||||||    
T  45738674 gaagtgtatattttaacataagaggggagaggagtgtaattcaag 45738718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 22711744 - 22711661
Alignment:
Q  16 ataggggagaagagtataaatgttagttttcaagag--tgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||  |||||||||| ||| ||||||||||  || ||||||||||||||| |||||| |||||||||||||| |||||    
T  22711744 ataggggaggggagtataaattttacttttcaagagagtggagtgtatattttaacataagaggggaggagagtgtaaatcaag 22711661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 144 - 219
Target Start/End: Original strand, 12428217 - 12428294
Alignment:
Q  144 atattacatattatacgtaggagtcggagttcgaactc--aaacacccaacttcttcacatttaaaatgtatgagctc 219  Q
    ||||| ||||||||| | ||| || || ||||||||||  ||||||||||||||| ||||||||||||||||||||||    
T  12428217 atattgcatattatatgcaggggttggggttcgaactcccaaacacccaacttctccacatttaaaatgtatgagctc 12428294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 40344434 - 40344483
Alignment:
Q  47 aagagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    |||||| |||||||||||||||| |||||| |||||||||||||||||||    
T  40344434 aagagtaaagtgtatattttaacataagaggggaggagagtgtaattcaa 40344483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 10412559 - 10412603
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||    
T  10412559 gaagtgtatattttaacataagaggggaggagagtgtaattcaag 10412603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 38670070 - 38670022
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||||||||||||||||||    
T  38670070 gagtaaagtgtatattttaacttaagaggggaggagagtgtaattcaag 38670022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 179
Target Start/End: Original strand, 30806119 - 30806177
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac 179  Q
    ||||||||||| ||||||| |||||||| ||||||||| | ||| ||||||||||||||    
T  30806119 tgagtttagctcagttggtagggatattgcatattatatgcaggggtcggagttcgaac 30806177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 29823399 - 29823358
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    ||||||||||||||| |||||| |||||||||||||||||||    
T  29823399 agtgtatattttaacttaagaggggaggagagtgtaattcaa 29823358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 110
Target Start/End: Complemental strand, 38987862 - 38987766
Alignment:
Q  16 ataggggagaagagtataaatgttagttttcaagag--tgaagtgtatattttaacgtaagagtggaggagagtgtaattcaagtttatttgagagg 110  Q
    |||||||||  |||| ||||| ||| ||||||||||  || ||||||||||||||| |||||| ||||| |||| |||||||||  | |||||||||    
T  38987862 ataggggaggggagtgtaaattttacttttcaagagagtggagtgtatattttaacataagaggggaggggagtttaattcaagcatctttgagagg 38987766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 317957 - 318005
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||||||    
T  317957 gagtaaagtgtatattttaacttaagaggggaggggagtgtaattcaag 318005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 6185332 - 6185380
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||||||    
T  6185332 gagtaaagtgtatattttaacttaagaggggaggggagtgtaattcaag 6185380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 6191848 - 6191896
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||||||    
T  6191848 gagtaaagtgtatattttaacttaagaggggaggggagtgtaattcaag 6191896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 11696320 - 11696237
Alignment:
Q  15 cataggggagaagagtataaatgttagttttcaa--gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    ||||||||||| |||||||||| ||| |||||||  |||  |||||||| ||||||| |||||  ||| |||||||||||||||    
T  11696320 cataggggagaggagtataaattttacttttcaatggaggaaagtgtatcttttaacataagaaaggatgagagtgtaattcaa 11696237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 25606999 - 25606951
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||||||    
T  25606999 gagtaaagtgtatattttaacttaagaggggaggggagtgtaattcaag 25606951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 97
Target Start/End: Complemental strand, 29615583 - 29615543
Alignment:
Q  57 tgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||| |||||| ||||||||||||||||||||    
T  29615583 tgtatattttaacataagaggggaggagagtgtaattcaag 29615543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 40401520 - 40401599
Alignment:
Q  20 gggagaagagtataaatgttagttttcaagagt--gaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||| ||||||||||| ||| |||||||| |   | ||||||||||||||| |||||| ||||| ||||||||||||||    
T  40401520 gggaggagagtataaattttacttttcaagggaagggagtgtatattttaacataagaggggaggggagtgtaattcaag 40401599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 25946 - 25993
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    |||| |||||||||||||||| |||||| ||||| |||||||||||||    
T  25946 gagtaaagtgtatattttaacttaagaggggaggtgagtgtaattcaa 25993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 29824029 - 29824076
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    |||| |||||||||||||||| |||||| ||||| |||||||||||||    
T  29824029 gagtaaagtgtatattttaacttaagaggggaggggagtgtaattcaa 29824076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 98
Target Start/End: Complemental strand, 34999254 - 34999211
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaagt 98  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||    
T  34999254 agtgtatattttaacataagaggggaggggagtgtaattcaagt 34999211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 36688824 - 36688906
Alignment:
Q  16 ataggggagaagagtataaatgttagttttcaagagtg--aagtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    |||||||||  |||||||| | ||| |||||||| | |  |||||||||||||||| |||||| ||||| |||||||||||||    
T  36688824 ataggggaggggagtataacttttacttttcaagggaggaaagtgtatattttaacataagaggggaggggagtgtaattcaa 36688906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 97
Target Start/End: Original strand, 42813583 - 42813626
Alignment:
Q  54 aagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||||||||| |||||| ||||| ||||||||||||||    
T  42813583 aagtgtatattttaacataagagaggaggggagtgtaattcaag 42813626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 25325 - 25283
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  25325 agtgtatattttaacttaagaggggaggggagtgtaattcaag 25283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 317347 - 317305
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  317347 agtgtatattttaacttaagaggggaggggagtgtaattcaag 317305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 2146105 - 2146063
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  2146105 agtgtatattttaacttaagaggggaggggagtgtaattcaag 2146063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 3341446 - 3341488
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| ||||||  |||||||||||||||||||    
T  3341446 agtgtatattttaacataagaggagaggagagtgtaattcaag 3341488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 5228644 - 5228686
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| ||| || ||||||||||||||||||||    
T  5228644 agtgtatattttaacataaaaggggaggagagtgtaattcaag 5228686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 11639965 - 11639923
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  11639965 agtgtatattttaacataagaggggaggggagtgtaattcaag 11639923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 93
Target Start/End: Complemental strand, 12677168 - 12677130
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaatt 93  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  12677168 agtgtatattttaacataagaggggaggagagtgtaatt 12677130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 218
Target Start/End: Complemental strand, 15716751 - 15716654
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac-tcaaacacccaacttcttcacatttaaaatgtatgagct 218  Q
    ||||||||||| ||||||| |||||||| | ||||||| | | | ||||| |||||||| ||  |||||| |||| ||||||||| |||||||||||||    
T  15716751 tgagtttagctcagttggtagggatattgcgtattatatgcaagggtcggggttcgaacttcggacaccccacttattcacattt-aaatgtatgagct 15716654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 20261587 - 20261629
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||| ||||||||||||||||    
T  20261587 agtgtatattttaacataagaggggatgagagtgtaattcaag 20261629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 179
Target Start/End: Original strand, 21066890 - 21066948
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac 179  Q
    ||||||||||| ||||||| |||||||| ||||||||| ||||| | ||| ||||||||    
T  21066890 tgagtttagctcagttggtagggatattgcatattatatgtaggggccggggttcgaac 21066948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 228
Target Start/End: Complemental strand, 27162331 - 27162253
Alignment:
Q  151 atattatacgtaggagtcggagttcgaactcaaacaccca-acttcttcacatttaaaatgtatgagctccagccatta 228  Q
    |||||||| | ||| |||||||||||||| |  ||  ||| |||||| |||||||||||||| ||||||||||||||||    
T  27162331 atattatatgcaggggtcggagttcgaaccccgaccaccacacttctgcacatttaaaatgtgtgagctccagccatta 27162253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 27619639 - 27619681
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  27619639 agtgtatattttaacataagaggggaggggagtgtaattcaag 27619681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 27633939 - 27633993
Alignment:
Q  125 tttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac 179  Q
    ||||||||||||||| |||||||| ||||||||| | ||| ||||| ||||||||    
T  27633939 tttagcttagttggtagggatattgcatattatatgcaggggtcggggttcgaac 27633993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 33869262 - 33869220
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| ||||||  |||||||||||||||||||    
T  33869262 agtgtatattttaacataagaggagaggagagtgtaattcaag 33869220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 38670689 - 38670731
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  38670689 agtgtatattttaacttaagaggggaggggagtgtaattcaag 38670731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 38790141 - 38790099
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  38790141 agtgtatattttaacataagaggggaggggagtgtaattcaag 38790099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 40400971 - 40400929
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||| ||||||||||||||||    
T  40400971 agtgtatattttaacataagaggggatgagagtgtaattcaag 40400929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 6184720 - 6184680
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    ||||||||||||||| |||||| |||||||||||||||||||    
T  6184720 agtgtatattttaacttaagag-ggaggagagtgtaattcaa 6184680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 10690871 - 10690948
Alignment:
Q  141 gggatattacatattatacgtaggagtcggagttcgaa-ctcaaacacccaacttcttcacatttaaaatgtatgagc 217  Q
    |||||||| ||||||||| | ||| ||||||||||||| | ||||||||| |||||| |||| ||||| ||| |||||    
T  10690871 gggatattgcatattatatgcaggggtcggagttcgaaccccaaacaccccacttctccacaattaaattgtgtgagc 10690948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 22263834 - 22263777
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaagtttatttgagagg 110  Q
    ||||||||||||||||| |||||| |||| ||| |||||||||||  | |||||||||    
T  22263834 gaagtgtatattttaacataagagaggagaagaatgtaattcaagcatctttgagagg 22263777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 25607617 - 25607658
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    ||||||||||||||| |||||| ||||| |||||||||||||    
T  25607617 agtgtatattttaacttaagaggggaggggagtgtaattcaa 25607658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 30004610 - 30004557
Alignment:
Q  126 ttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac 179  Q
    |||||| ||||||| ||||||||||||||||||  |||| ||||| ||||||||    
T  30004610 ttagctcagttggtagggatattacatattatatataggggtcggggttcgaac 30004557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 97
Target Start/End: Complemental strand, 1573145 - 1573105
Alignment:
Q  57 tgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||| |||||| ||||| ||||||||||||||    
T  1573145 tgtatattttaacataagaggggaggggagtgtaattcaag 1573105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 2146874 - 2146922
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| | ||| ||||||||||||||    
T  2146874 gagtaaagtgtatattttaacttaagagggaaggggagtgtaattcaag 2146922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 2935764 - 2935808
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||| |||||| ||| | ||||||||||||||    
T  2935764 gaagtgtatattttaacataagaggggaagggagtgtaattcaag 2935808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 2996590 - 2996630
Alignment:
Q  182 aaacacccaacttcttcacatttaaaatgtatgagctccag 222  Q
    |||||||| |||||| |||||||||||||| ||||||||||    
T  2996590 aaacaccctacttctccacatttaaaatgtttgagctccag 2996630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 32388151 - 32388195
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||| |||||| ||||  ||||||||||||||    
T  32388151 gaagtgtatattttaacataagaggggagtggagtgtaattcaag 32388195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 48982544 - 48982596
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaagtttatttgag 107  Q
    ||||||||||||||| |||||| |||||  |||||||||||||  ||||||||    
T  48982544 agtgtatattttaacataagaggggagggaagtgtaattcaagcatatttgag 48982596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 12767575 - 12767654
Alignment:
Q  20 gggagaagagtataaatgttagttttcaag--agtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||| ||||||||||| ||| ||||||||  || ||||||||||||||||| |||||| ||||| ||||||||||||||    
T  12767575 gggaggagagtataaattttatttttcaagggagggaagtgtatattttaacataagaggggaggggagtgtaattcaag 12767654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 21802580 - 21802652
Alignment:
Q  27 gagtataaatgttagttttcaag--agtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||| ||| ||||||||  || | ||||||||||||||| |||||| ||||||||||||||||||||    
T  21802580 gagtataaattttacttttcaagggaggggagtgtatattttaacataagaggggaggagagtgtaattcaag 21802652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 14306901 - 14306818
Alignment:
Q  16 ataggggagaagagtataaatgttagttttcaag--agtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||| | ||||| ||||| ||| ||||||||  || ||||||||||||||||| |||||| |||||||| |||||||||||    
T  14306901 atagggggggagagtgtaaattttacttttcaaggaagggaagtgtatattttaacataagaggggaggagaatgtaattcaag 14306818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 22268585 - 22268527
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaagtttatttgag 107  Q
    |||| ||||||| |||||||| |||||| |||||||||||||||||||| || ||||||    
T  22268585 gagtaaagtgtaaattttaacataagaggggaggagagtgtaattcaagcttctttgag 22268527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 25527798 - 25527756
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  25527798 agtgtatattttaacttaagaggggaggagagtgtaattcaag 25527756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 6936443 - 6936402
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    ||||||||||||||| |||||| |||||||||||||||||||    
T  6936443 agtgtatattttaacataagaggggaggagagtgtaattcaa 6936402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 21847345 - 21847417
Alignment:
Q  27 gagtataaatgttagttttcaa--gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||| ||| ||| |||  ||| ||||||||||||||||| |||||| |||||||||| |||||||||    
T  21847345 gagtataaattttactttgcaaaggagggaagtgtatattttaacataagaggggaggagagtctaattcaag 21847417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 2500575 - 2500523
Alignment:
Q  126 ttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaa 178  Q
    |||||||||||||| |||||||| ||||||||| ||||  |||||||||||||    
T  2500575 ttagcttagttggtagggatattgcatattatatgtagaggtcggagttcgaa 2500523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 9241539 - 9241587
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||||||    
T  9241539 gagtaaagtgtatattttaacttaagaggggaggggagtgtaattcaag 9241587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 11523477 - 11523525
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||||||    
T  11523477 gagtaaagtgtatattttaacttaagaggggaggggagtgtaattcaag 11523525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 14873697 - 14873745
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||||||    
T  14873697 gagtaaagtgtatattttaacttaagaggggaggggagtgtaattcaag 14873745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 27923749 - 27923797
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||||||    
T  27923749 gagtaaagtgtatattttaacttaagaggggaggggagtgtaattcaag 27923797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 34709917 - 34709965
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||||||    
T  34709917 gagtaaagtgtatattttaacttaagaggggaggggagtgtaattcaag 34709965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 2092302 - 2092384
Alignment:
Q  16 ataggggagaagagtataaatgttagttttcaagagt--gaagtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    |||||||||  |||||||||| ||| |||||||| |   ||||||||||||||||  |||||| ||||| |||||||||||||    
T  2092302 ataggggaggggagtataaattttacttttcaagggatggaagtgtatattttaatataagaggggaggggagtgtaattcaa 2092384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 3767139 - 3767092
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    |||| |||||||||||||||| |||||| ||| |||||||||||||||    
T  3767139 gagtaaagtgtatattttaacttaagaggggatgagagtgtaattcaa 3767092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 4125945 - 4125890
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaagtttatttgagagg 110  Q
    ||||||||||||||| |||||| |||||||||||||||| |||  | |||||||||    
T  4125945 agtgtatattttaacataagaggggaggagagtgtaatttaagcatctttgagagg 4125890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 9240929 - 9240886
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    ||||||||||||||||| |||||| ||||| |||||||||||||    
T  9240929 gaagtgtatattttaacttaagaggggaggggagtgtaattcaa 9240886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 12026203 - 12026258
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaagtttatttgagagg 110  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||  | |||||||||    
T  12026203 agtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgagagg 12026258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 97
Target Start/End: Original strand, 25528422 - 25528465
Alignment:
Q  54 aagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||||||||| |||||| ||||| ||||||||||||||    
T  25528422 aagtgtatattttaacttaagagaggaggggagtgtaattcaag 25528465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 34250686 - 34250756
Alignment:
Q  29 gtataaatgttagttttcaagagtg--aagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||| ||| |||||||| |||  |||||||||||||| | |||||| |||| |||||||||||||||    
T  34250686 gtataaattttaattttcaagggtgggaagtgtatattttagcataagaggggagaagagtgtaattcaag 34250756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 34280090 - 34280043
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    |||| |||||||||||||||| |||||| ||||| |||||||||||||    
T  34280090 gagtaaagtgtatattttaacttaagaggggaggggagtgtaattcaa 34280043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 97
Target Start/End: Original strand, 34794527 - 34794570
Alignment:
Q  54 aagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||||||||| |||||| ||||| ||||||||||||||    
T  34794527 aagtgtatattttaacataagaggggaggggagtgtaattcaag 34794570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 188439 - 188481
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  188439 agtgtatattttaacttaagaggggaggggagtgtaattcaag 188481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 2522737 - 2522695
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||  |||||| ||||||||||||||||||||    
T  2522737 agtgtatattttaatataagaggggaggagagtgtaattcaag 2522695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 7072094 - 7072140
Alignment:
Q  133 agttggtcgggatattacatattatacgtaggagtcggagttcgaac 179  Q
    ||||||| |||||||||||||||||| | ||||||||| ||||||||    
T  7072094 agttggtagggatattacatattatatgcaggagtcggggttcgaac 7072140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 11522868 - 11522826
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  11522868 agtgtatattttaacttaagaggggaggggagtgtaattcaag 11522826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 12033123 - 12033165
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  12033123 agtgtatattttaacttaagaggggaggggagtgtaattcaag 12033165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 97
Target Start/End: Original strand, 14224500 - 14224538
Alignment:
Q  59 tatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||| ||||||| |||||||||||||||||||    
T  14224500 tatattttaacataagagtagaggagagtgtaattcaag 14224538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 14579352 - 14579298
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttc 175  Q
    ||||||||||||| ||||| |||||||| || |||||| | ||||||||||||||    
T  14579352 tgagtttagcttatttggtagggatattgcaaattatatgcaggagtcggagttc 14579298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 97
Target Start/End: Original strand, 17312108 - 17312146
Alignment:
Q  59 tatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  17312108 tatattttaacataagagtggaggggagtgtaattcaag 17312146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 21802007 - 21801965
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| ||||| |||||| ||||||||||||||    
T  21802007 agtgtatattttaacataagaatggaggggagtgtaattcaag 21801965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 22022280 - 22022322
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||| ||||||||||||||||    
T  22022280 agtgtatattttaacataagaggggatgagagtgtaattcaag 22022322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 179
Target Start/End: Original strand, 29284270 - 29284328
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac 179  Q
    ||||||||||| ||||||| |||||||| ||||||||| | ||| | ||||||||||||    
T  29284270 tgagtttagctcagttggtagggatattgcatattatatgaaggggccggagttcgaac 29284328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 2091757 - 2091716
Alignment:
Q  54 aagtgtatattttaacgtaagagtggaggagagtgtaattca 95  Q
    |||||||||||||||| |||||| ||||| ||||||||||||    
T  2091757 aagtgtatattttaacataagaggggaggggagtgtaattca 2091716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 3294768 - 3294873
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaactcaa-acacccaacttcttcacatttaaaatgtatgagctc 219  Q
    |||| |||||| ||||||| |||||||| ||||||||| | ||| ||||| |||||||| |   |||||| ||||||||||| ||||| ||| |||| ||    
T  3294768 tgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttcgaaccccggacaccccacttcttcacaattaaattgtgtgagttc 3294867  T
Q  220 cagcca 225  Q
     |||||    
T  3294868 tagcca 3294873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 5694921 - 5695025
Alignment:
Q  124 gtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac-tcaaacacccaacttcttcacatttaaaatgtatgagctccag 222  Q
    |||||| | ||||||| ||||||||  |||||||| | ||| || |||||| |||| ||  |||||| |||||| |||||| ||||||| ||||||||||    
T  5694921 gtttaggtcagttggtagggatattgtatattatatgcaggggtaggagtttgaacctcggacaccccacttctccacatt-aaaatgtgtgagctccag 5695019  T
Q  223 ccatta 228  Q
    ||||||    
T  5695020 ccatta 5695025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 18904333 - 18904374
Alignment:
Q  184 acacccaacttcttcacatttaaaatgtatgagctccagcca 225  Q
    |||||| |||||| |||||||||||||| |||||||||||||    
T  18904333 acaccccacttctccacatttaaaatgtgtgagctccagcca 18904374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 31104906 - 31104994
Alignment:
Q  141 gggatattacatattatacgtaggagtcggagttcgaa-ctcaaacacccaacttcttcacatttaaaatgtatgagctccagccattat 229  Q
    |||||||||||||||||| | ||| | ||||||||||| | |  |||||| |||||| |||| ||||||||| ||||||| |||||||||    
T  31104906 gggatattacatattatatgcaggggccggagttcgaatcccggacaccccacttctccaca-ttaaaatgtgtgagctctagccattat 31104994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 32621584 - 32621543
Alignment:
Q  184 acacccaacttcttcacatttaaaatgtatgagctccagcca 225  Q
    |||||| |||||| |||||||||||||| |||||||||||||    
T  32621584 acaccccacttctccacatttaaaatgtgtgagctccagcca 32621543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 187844 - 187796
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| | ||| ||||||||||||||    
T  187844 gagtaaagtgtatattttaacttaagagggaaggtgagtgtaattcaag 187796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 4100697 - 4100649
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| ||||||| |||||||| |||||| |||||||| |||||||||||    
T  4100697 gagtaaagtgtagattttaacataagaggggaggagaatgtaattcaag 4100649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 4126059 - 4126011
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| ||||||| |||||||| |||||| |||||||| |||||||||||    
T  4126059 gagtaaagtgtagattttaacataagaggggaggagaatgtaattcaag 4126011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 97
Target Start/End: Complemental strand, 7448295 - 7448255
Alignment:
Q  57 tgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||| |||||| | ||||||||||||||||||    
T  7448295 tgtatattttaacataagagagaaggagagtgtaattcaag 7448255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 10702903 - 10702982
Alignment:
Q  20 gggagaagagtataaatgttagttttcaag--agtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||| ||||||||||| | | ||||||||  || ||||||||||||||||| |||||| ||||   |||||||||||||    
T  10702903 gggaggagagtataaatttaatttttcaagggagggaagtgtatattttaacataagaggggagagaagtgtaattcaag 10702982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 12025591 - 12025543
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| | ||| ||||||||||||||    
T  12025591 gagtaaagtgtatattttaacttaagagggaaggggagtgtaattcaag 12025543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 12767113 - 12767065
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| ||||||| |||||||| |||||| |||||||| |||||||||||    
T  12767113 gagtaaagtgtaaattttaacataagaggggaggagaatgtaattcaag 12767065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 14313857 - 14313897
Alignment:
Q  57 tgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||| |||||| ||||| ||||||||||||||    
T  14313857 tgtatattttaacataagaggggaggggagtgtaattcaag 14313897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 97
Target Start/End: Complemental strand, 14873084 - 14873044
Alignment:
Q  57 tgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||| |||||| ||||| ||||||||||||||    
T  14873084 tgtatattttaacttaagaggggaggggagtgtaattcaag 14873044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 25577207 - 25577259
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaagtttatttgag 107  Q
    ||||||||||||||| |||||| ||| | |||||||||||||| || ||||||    
T  25577207 agtgtatattttaacttaagaggggatgggagtgtaattcaagcttctttgag 25577259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 20183978 - 20184061
Alignment:
Q  16 ataggggagaagagtataaatgttagttttcaag--agtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||  |||||||||| ||||||||||||  || |||||||||||| |||| |||||| ||||| ||||||||||||||    
T  20183978 ataggggaggggagtataaattttagttttcaagggagggaagtgtatattgtaacataagaggggaggggagtgtaattcaag 20184061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 211
Target Start/End: Original strand, 29499183 - 29499270
Alignment:
Q  125 tttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaact-caaacacccaacttcttcacatttaaaatgt 211  Q
    ||||||||||||||| | ||||||| |||||||| | ||| ||||||||||||||| ||||||||| || ||| || |||||||||||    
T  29499183 tttagcttagttggtagagatattagatattatatgcaggggtcggagttcgaactccaaacaccctacctctccatatttaaaatgt 29499270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 42598991 - 42599034
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  42598991 gaagtgtatattttaacataagagtggaggagagtgtaattcaa 42599034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 33909073 - 33909114
Alignment:
Q  184 acacccaacttcttcacatttaaaatgtatgagctccagcca 225  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  33909073 acacccaacttctccacatttaaaatgtatgagctccagcca 33909114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 42320321 - 42320426
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaa-ctcaaacacccaacttcttcacatttaaaatgtatgagctc 219  Q
    |||| |||||| ||||||| |||||||| ||||||||| | ||||||||||||||||| | | ||||| | |||||| |||| ||||| ||| |||||||    
T  42320321 tgagcttagctcagttggtagggatattgcatattatatgcaggagtcggagttcgaaccccgaacactccacttctccacaattaaattgtgtgagctc 42320420  T
Q  220 cagcca 225  Q
     |||||    
T  42320421 tagcca 42320426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 4055408 - 4055456
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||||||||||||||||||    
T  4055408 gagtaaagtgtatattttaacttaagaggggaggagagtgtaattcaag 4055456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 228
Target Start/End: Original strand, 16745105 - 16745193
Alignment:
Q  141 gggatattacatattatacgtaggagtcggagttcgaact-caaacacccaacttcttcacatttaaaatgtatgagctccagccatta 228  Q
    |||||||| ||||||||| ||||| ||||||||||||||| || |||||| |||||| |||| ||||| | | ||||||| ||||||||    
T  16745105 gggatattgcatattatatgtaggggtcggagttcgaactccagacaccccacttctccacaattaaattatgtgagctctagccatta 16745193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 126 - 209
Target Start/End: Complemental strand, 32392187 - 32392103
Alignment:
Q  126 ttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac-tcaaacacccaacttcttcacatttaaaat 209  Q
    |||||||||||||| |||||||| |||||||||||||||  || ||||| |||| ||  |||||| ||||||||| |||||||||    
T  32392187 ttagcttagttggtagggatattgcatattatacgtagggatcagagtttgaacttcggacaccctacttcttcatatttaaaat 32392103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 4877380 - 4877422
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  4877380 agtgtatattttaacataagaggggaggagagtgtaattcaag 4877422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 31850103 - 31850031
Alignment:
Q  27 gagtataaatgttagttttcaa--gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||| ||| |||||||  |||  |||||||||||||||| |||||| ||| ||||||||||||||||    
T  31850103 gagtataaattttatttttcaaaggaggaaagtgtatattttaacataagagaggatgagagtgtaattcaag 31850031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 8572774 - 8572726
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||||||| ||||||  |||| ||||||||||||||    
T  8572774 gagtgaagtgtatattttaacataagagatgaggggagtgtaattcaag 8572726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 8573313 - 8573396
Alignment:
Q  16 ataggggagaagagtataaatgttagttttcaa--gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||  |||| ||||| ||| |||||||  ||| | ||||||||||||||| |||||| | ||||||||||||||||||    
T  8573313 ataggggaggggagtgtaaattttacttttcaaaggaggggagtgtatattttaacataagagggaaggagagtgtaattcaag 8573396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 9017718 - 9017674
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||| |||||| ||||| ||||||||||||||    
T  9017718 gaagtgtatattttaacataagaggggaggggagtgtaattcaag 9017674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 20540981 - 20541029
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| |||||||| |||||||||||    
T  20540981 gagtaaagtgtatattttaacttaagaggggaggagaatgtaattcaag 20541029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 20570827 - 20570875
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||| ||||||||||||||| |||||| |||||||||||| |||||||    
T  20570827 gagtggagtgtatattttaacataagaggggaggagagtgtgattcaag 20570875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 20691189 - 20691141
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||||||    
T  20691189 gagtaaagtgtatattttaacttaagaggggaggggagtgtaattcaag 20691141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 24624892 - 24624844
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||||||    
T  24624892 gagtaaagtgtatattttaacttaagaggggaggggagtgtaattcaag 24624844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 32389698 - 32389646
Alignment:
Q  123 agtttagcttagttggtcgggatattacatattatacgtaggagtcggagttc 175  Q
    ||||||||| ||||||| | |||||| ||||||||| ||||||||||||||||    
T  32389698 agtttagctcagttggtagagatattgcatattatatgtaggagtcggagttc 32389646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 36737452 - 36737496
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||| |||||| ||||| ||||||||||||||    
T  36737452 gaagtgtatattttaacataagaggggaggggagtgtaattcaag 36737496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 37333978 - 37333930
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||||||    
T  37333978 gagtaaagtgtatattttaacttaagaggggaggggagtgtaattcaag 37333930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 37657456 - 37657408
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||||||    
T  37657456 gagtaaagtgtatattttaacttaagaggggaggggagtgtaattcaag 37657408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 37658080 - 37658132
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaagtttatttgag 107  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||  ||||||||    
T  37658080 agtgtatattttaacttaagaggggaggggagtgtaattcaagcatatttgag 37658132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 219
Target Start/End: Original strand, 546818 - 546905
Alignment:
Q  133 agttggtcgggatattacatattatacgtaggagtcggagttcgaac-tcaaacacccaacttcttcacatttaaaatgtatgagctc 219  Q
    ||||||| |||||||| ||||||||| | ||| ||||| |||||||| || |||| || ||||||||||| ||||| ||| |||||||    
T  546818 agttggtagggatattgcatattatatgcaggggtcggggttcgaacctcgaacatcccacttcttcacaattaaattgtgtgagctc 546905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 121 - 219
Target Start/End: Original strand, 8241054 - 8241153
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaactcaa-acacccaacttcttcacatttaaaatgtatgagctc 219  Q
    |||| |||||| ||||||| |||||||| ||||||||| | | | ||||| |||||||| |   |||||| |||||| |||||||||||||| |||||||    
T  8241054 tgagcttagctcagttggtagggatattgcatattatatgcaagggtcggggttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctc 8241153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 30782891 - 30782840
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaagttt 100  Q
    |||| ||||||| |||||||| |||||| |||||||| ||||||||||||||    
T  30782891 gagtaaagtgtagattttaacataagaggggaggagaatgtaattcaagttt 30782840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 97
Target Start/End: Original strand, 31476969 - 31477012
Alignment:
Q  54 aagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||||||||| |||||| ||||| ||||||||||||||    
T  31476969 aagtgtatattttaacataagaggggaggggagtgtaattcaag 31477012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 179
Target Start/End: Original strand, 2328596 - 2328654
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac 179  Q
    |||| |||||||||||||| |||||||| ||||||||| | ||||| ||| ||||||||    
T  2328596 tgagcttagcttagttggtagggatattgcatattatatgcaggagccggggttcgaac 2328654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 10687696 - 10687615
Alignment:
Q  18 aggggagaagagtataaatgttagttttcaag--agtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||  |||| ||||||||| ||||||||  || |||||||||| |||||| ||||||  || ||||||||||||||||    
T  10687696 aggggaggggagtgtaaatgttacttttcaagggagggaagtgtataatttaacataagagatgatgagagtgtaattcaag 10687615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 13686037 - 13685995
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||| ||||||||||||||||    
T  13686037 agtgtatattttaacataagaggggatgagagtgtaattcaag 13685995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 19408608 - 19408566
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  19408608 agtgtatattttaacataagaggggaggggagtgtaattcaag 19408566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 20570197 - 20570155
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  20570197 agtgtatattttaacataagagaggaggggagtgtaattcaag 20570155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 36762210 - 36762141
Alignment:
Q  30 tataaatgttagttttcaag--agtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||| ||| ||||||||  || ||||||||||||||||  |||||| ||||| ||||||||||||||    
T  36762210 tataaattttacttttcaagggagggaagtgtatattttaaaataagaggggaggggagtgtaattcaag 36762141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 38642263 - 38642205
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac 179  Q
    ||||||||||||||||||| || ||||||||||||||| | |||  | |||||||||||    
T  38642263 tgagtttagcttagttggtaggaatattacatattatatgcagggattggagttcgaac 38642205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 39919159 - 39919101
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac 179  Q
    |||| |||||||||||||| |||||||| ||||||||| | ||||| ||| ||||||||    
T  39919159 tgagcttagcttagttggtagggatattgcatattatatgcaggagccggggttcgaac 39919101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 179
Target Start/End: Original strand, 42525404 - 42525462
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac 179  Q
    ||||||||||| ||||||| |||||||| ||||||||| | ||||| ||| ||||||||    
T  42525404 tgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaac 42525462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 3741022 - 3741063
Alignment:
Q  184 acacccaacttcttcacatttaaaatgtatgagctccagcca 225  Q
    |||||| |||||| |||||||||||||| |||||||||||||    
T  3741022 acaccccacttctccacatttaaaatgtgtgagctccagcca 3741063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 3933954 - 3934026
Alignment:
Q  27 gagtataaatgttagttttcaag--agtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||| ||| ||||||||  || ||| ||||||||||||| |||||| |||||  |||||||||||||    
T  3933954 gagtataaattttacttttcaaggaagggaaatgtatattttaacataagaggggagggaagtgtaattcaag 3934026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 6734741 - 6734700
Alignment:
Q  184 acacccaacttcttcacatttaaaatgtatgagctccagcca 225  Q
    |||||| |||||| |||||||||||||| |||||||||||||    
T  6734741 acaccccacttctccacatttaaaatgtgtgagctccagcca 6734700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 39147731 - 39147824
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaactc-aaacacccaacttcttcacatttaaaatgtat 213  Q
    |||||||| || ||||||| || ||| | ||||||||| || ||||  ||||||||||| | |||||||| |||||| | ||||||||||||||    
T  39147731 tgagtttatctcagttggtaggaatactgcatattatatgttggagctggagttcgaaccccaaacaccccacttctccgcatttaaaatgtat 39147824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 141582 - 141669
Alignment:
Q  15 cataggggagaagagtataaatgttagttttcaa--gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaagttt 100  Q
    ||||||||||  |||||||||| ||| |||||||  ||| | | ||||||||||||| |||||||||| || | | ||||||||||||    
T  141582 cataggggaggggagtataaattttacttttcaaaggaggggattgtatattttaacataagagtggaagaaaatataattcaagttt 141669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 97
Target Start/End: Complemental strand, 6029521 - 6029481
Alignment:
Q  57 tgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||| |||||| ||| ||||||||||||||||    
T  6029521 tgtatattttaacataagagaggatgagagtgtaattcaag 6029481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 9119547 - 9119595
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| ||||||| |||||||| |||||| ||||| ||||||||||||||    
T  9119547 gagtaaagtgtacattttaacttaagaggggaggggagtgtaattcaag 9119595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 13686630 - 13686682
Alignment:
Q  58 gtatattttaacgtaagagtggaggagagtgtaattcaagtttatttgagagg 110  Q
    |||||||||||| |||||| ||| ||||||||||||||||  | |||||||||    
T  13686630 gtatattttaacataagaggggatgagagtgtaattcaagcatctttgagagg 13686682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 14594168 - 14594097
Alignment:
Q  27 gagtataaatgttagttttcaag--agtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    |||||||||| ||| ||||||||  || ||||||||||||||||| |||||| ||||  || ||||||||||    
T  14594168 gagtataaattttacttttcaagggagggaagtgtatattttaacataagaggggagatgattgtaattcaa 14594097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 15145043 - 15145126
Alignment:
Q  16 ataggggagaagagtataaatgttagttttcaagagtgaag--tgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||| ||| |||||||||| ||| |||||||| | | ||  ||||||||||||  |||| | ||||||||||||||||||||    
T  15145043 atagggaagaggagtataaattttacttttcaagggaggagattgtatattttaatataagtggggaggagagtgtaattcaag 15145126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 15175276 - 15175232
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||| |||||| |||||  |||||||||||||    
T  15175276 gaagtgtatattttaacataagaggggagggaagtgtaattcaag 15175232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 17781049 - 17781092
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||| |||||| ||||| ||||||||||||||    
T  17781049 gaagtgtatattttaacataagaggggagg-gagtgtaattcaag 17781092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 22229028 - 22228968
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaactc 181  Q
    ||||||||||| |||||||  ||||||| ||| ||||| | ||| ||||||||||||||||    
T  22229028 tgagtttagctcagttggtatggatattgcatgttatatgcaggggtcggagttcgaactc 22228968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 22730564 - 22730516
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| ||||||| |||||||| |||||| |||||||| |||||||||||    
T  22730564 gagtaaagtgtagattttaacataagaggggaggagaatgtaattcaag 22730516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 97
Target Start/End: Complemental strand, 27979298 - 27979258
Alignment:
Q  57 tgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||| |||||| ||||| ||||||||||||||    
T  27979298 tgtatattttaacataagaggggaggggagtgtaattcaag 27979258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 31850659 - 31850707
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||| ||||||||||||| |||||| ||  ||||||||||||||||    
T  31850659 gagtgaaatgtatattttaacataagaggggtagagagtgtaattcaag 31850707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 97
Target Start/End: Complemental strand, 38497395 - 38497355
Alignment:
Q  57 tgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||| |||||| |||| |||||||||||||||    
T  38497395 tgtatattttaacataagaggggagaagagtgtaattcaag 38497355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 40957422 - 40957462
Alignment:
Q  57 tgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||| |||||| ||||| ||||||||||||||    
T  40957422 tgtatattttaacctaagaggggaggtgagtgtaattcaag 40957462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 51019749 - 51019678
Alignment:
Q  28 agtataaatgttagttttcaag--agtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||| ||| ||||||||  || ||||||||||||||||| |||||| ||||||||||||||||||||    
T  51019749 agtataaattttacttttcaagggagggaagtgtatattttaacataagaggggaggagagtgtaattcaag 51019678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 121 - 219
Target Start/End: Complemental strand, 39697928 - 39697830
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaactcaaacacccaacttcttcacatttaaaatgtatgagctc 219  Q
    |||| |||||| ||||| | |||||||| ||||||||| | ||| ||||| ||||||| || ||||||| ||||||||||| ||||| ||| |||||||    
T  39697928 tgagcttagctcagttgatagggatattgcatattatatgcaggggtcggggttcgaattcgaacaccccacttcttcacaattaaattgtgtgagctc 39697830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 55815003 - 55815045
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  55815003 agtgtatattttaacgtaagagaggaggagagtgtaattcaag 55815045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 25010035 - 25010105
Alignment:
Q  29 gtataaatgttagttttcaagag--tgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||| ||| |||||||| |  || ||||||||||||||| |||||| ||||||||||||||||||||    
T  25010035 gtataaattttacttttcaagggaatggagtgtatattttaacataagaggggaggagagtgtaattcaag 25010105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 30192580 - 30192537
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    ||||||||||||||||| |||||| |||||||||||||||||||    
T  30192580 gaagtgtatattttaacataagaggggaggagagtgtaattcaa 30192537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 46076459 - 46076376
Alignment:
Q  15 cataggggagaagagtataaatgttagttttcaagag-tgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||| ||| |||||||||| ||| ||||||| || || ||||||||||||||| | |||||||| |||||| |||||||||    
T  46076459 catagggaagaggagtataaattttacttttcaaaagatgtagtgtatattttaacatgagagtggatgagagtctaattcaag 46076376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 13482252 - 13482210
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  13482252 agtgtatattttaacataagaggggaggagagtgtaattcaag 13482210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 218
Target Start/End: Original strand, 42395231 - 42395329
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaact-caaacacccaacttcttcacatttaaaatgtatgagct 218  Q
    |||| |||||||||||||| |||||||| ||||||||| ||||| | ||| ||||||||| |  |||||| |||||| |||| ||||| ||| ||||||    
T  42395231 tgagcttagcttagttggtagggatattgcatattatatgtaggggccggggttcgaactccggacaccccacttctccacaattaaattgtgtgagct 42395329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 46095475 - 46095433
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  46095475 agtgtatattttaacttaagaggggaggagagtgtaattcaag 46095433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 47030488 - 47030530
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  47030488 agtgtatattttaacttaagaggggaggagagtgtaattcaag 47030530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 10042472 - 10042427
Alignment:
Q  133 agttggtcgggatattacatattatacgtaggagtcggagttcgaa 178  Q
    ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  10042472 agttggtagggatattgcatattatatgtaggagtcggagttcgaa 10042427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 21037397 - 21037325
Alignment:
Q  27 gagtataaatgttagttttcaagagtg--aagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||| ||| |||||||| | |  |||||||||||||||| |||||| ||||| ||||||||||||||    
T  21037397 gagtataaattttacttttcaagggaggaaagtgtatattttaacataagagaggaggggagtgtaattcaag 21037325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 29429698 - 29429747
Alignment:
Q  48 agagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| ||||||||||||||||| |||||| | ||||||||||||||||||    
T  29429698 agagggaagtgtatattttaacataagagagaaggagagtgtaattcaag 29429747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 34932499 - 34932604
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaactc-aaacacccaacttcttcacatttaaaatgtatgagctc 219  Q
    |||| |||||| ||||||| || ||||| ||  ||||| ||||| ||||| |||||||| | |||||||| |||||| |||| ||||| |||||||||||    
T  34932499 tgagcttagctcagttggtaggaatattgcacgttatatgtaggggtcggggttcgaaccccaaacaccctacttctccacaattaaattgtatgagctc 34932598  T
Q  220 cagcca 225  Q
     |||||    
T  34932599 tagcca 34932604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 39696403 - 39696299
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaa-ctcaaacacccaacttcttcacatttaaaatgtatgagctc 219  Q
    |||| |||||| ||||||| |||||||| ||||||||| ||||||||||| ||||||| | | ||||| | |||||| |||| ||||| ||| |||||||    
T  39696403 tgagcttagctcagttggtagggatattgcatattatatgtaggagtcgg-gttcgaaccccgaacactctacttctccacaattaaattgtgtgagctc 39696305  T
Q  220 cagcca 225  Q
     |||||    
T  39696304 tagcca 39696299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 56310073 - 56310114
Alignment:
Q  56 gtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||||||| |||||| ||||||||||||||||||||    
T  56310073 gtgtatattttaacataagagaggaggagagtgtaattcaag 56310114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 615509 - 615461
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||||| ||| ||||||||||||||    
T  615509 gagtaaagtgtatattttaacttaagagtgaaggggagtgtaattcaag 615461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 6233109 - 6233161
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaagtttatttgag 107  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||| | ||||||    
T  6233109 agtgtatattttaacttaagaggggaggggagtgtaattcaagtatctttgag 6233161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 7165471 - 7165423
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||||||    
T  7165471 gagtaaagtgtatattttaacttaagaggggaggggagtgtaattcaag 7165423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 12250749 - 12250701
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||||||    
T  12250749 gagtaaagtgtatattttaacttaagaggggaggggagtgtaattcaag 12250701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 13392751 - 13392799
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||||||    
T  13392751 gagtaaagtgtatattttaacttaagaggggaggggagtgtaattcaag 13392799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 13395260 - 13395216
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||| |||||| ||||| ||||||||||||||    
T  13395260 gaagtgtatattttaacttaagaggggaggggagtgtaattcaag 13395216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 13395890 - 13395938
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||||||    
T  13395890 gagtaaagtgtatattttaacttaagaggggaggggagtgtaattcaag 13395938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 23309478 - 23309526
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||||||    
T  23309478 gagtaaagtgtatattttaacttaagaggggaggggagtgtaattcaag 23309526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 27103162 - 27103110
Alignment:
Q  126 ttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaa 178  Q
    |||||||||||||| |||||||| ||||||||| ||||  |||||||||||||    
T  27103162 ttagcttagttggtagggatattgcatattatatgtagaggtcggagttcgaa 27103110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 41871261 - 41871317
Alignment:
Q  124 gtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaact 180  Q
    ||||| |||||||||| | |||||||||||||||| | || ||||||||||||||||    
T  41871261 gtttaacttagttggtagagatattacatattatatgcagtagtcggagttcgaact 41871317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 47029892 - 47029844
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||||||    
T  47029892 gagtaaagtgtatattttaacttaagaggggaggggagtgtaattcaag 47029844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 5803543 - 5803582
Alignment:
Q  183 aacacccaacttcttcacatttaaaatgtatgagctccag 222  Q
    ||||||| ||||||||||||||||||||| ||||||||||    
T  5803543 aacaccccacttcttcacatttaaaatgtgtgagctccag 5803582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 97
Target Start/End: Original strand, 23265789 - 23265832
Alignment:
Q  54 aagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||||||||| |||||| ||| ||||||||||||||||    
T  23265789 aagtgtatattttaacttaagaggggaagagagtgtaattcaag 23265832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 97
Target Start/End: Complemental strand, 23308868 - 23308825
Alignment:
Q  54 aagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||||||||| |||||| ||||| ||||||||||||||    
T  23308868 aagtgtatattttaacttaagaggggaggggagtgtaattcaag 23308825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 32448916 - 32448998
Alignment:
Q  27 gagtataaatgttagttttcaa--gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaagtttatttgag 107  Q
    |||||||| | ||| |||||||  ||| ||||||||||||||||| |||||| ||||  ||||||||||||||| | ||||||    
T  32448916 gagtataacttttacttttcaaaggagggaagtgtatattttaacataagaggggagtggagtgtaattcaagtatctttgag 32448998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 179
Target Start/End: Original strand, 34760848 - 34760883
Alignment:
Q  144 atattacatattatacgtaggagtcggagttcgaac 179  Q
    |||||||||||||||||||||||| |||||||||||    
T  34760848 atattacatattatacgtaggagttggagttcgaac 34760883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 47931236 - 47931291
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaagtttatttgagagg 110  Q
    ||||||||||||||| |||||| ||||  |||||||||||||  ||||||||||||    
T  47931236 agtgtatattttaacataagaggggagatgagtgtaattcaaacttatttgagagg 47931291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 55068912 - 55068857
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaagtttatttgagagg 110  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||  | |||||||||    
T  55068912 agtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgagagg 55068857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 616137 - 616179
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  616137 agtgtatattttaacttaagagaggaggggagtgtaattcaag 616179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 796452 - 796410
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  796452 agtgtatattttaacttaagaggggaggggagtgtaattcaag 796410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 4649698 - 4649747
Alignment:
Q  47 aagagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||||||||| ||||||  |||| ||||||||||||||    
T  4649698 aagagtgaagtgtatattttaacataagag-cgaggggagtgtaattcaag 4649747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 8192996 - 8193038
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  8192996 agtgtatattttaacttaagaggggaggggagtgtaattcaag 8193038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 179
Target Start/End: Original strand, 9661554 - 9661612
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac 179  Q
    |||||||| || |||||||  ||||||| ||||||||| ||| ||||||||||||||||    
T  9661554 tgagtttatctcagttggtatggatattgcatattatatgtaagagtcggagttcgaac 9661612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 10417287 - 10417229
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac 179  Q
    |||| |||||| ||||||| |||||||||||||||||| | ||||||| | ||||||||    
T  10417287 tgagcttagctcagttggtagggatattacatattatatgcaggagtcagggttcgaac 10417229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 16192321 - 16192363
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  16192321 agtgtatattttaacataagagaggaggggagtgtaattcaag 16192363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 17722819 - 17722777
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  17722819 agtgtatattttaacataagaggggaggggagtgtaattcaag 17722777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 19313414 - 19313372
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||| ||||||||||||||||    
T  19313414 agtgtatattttaacataagaggggatgagagtgtaattcaag 19313372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 23241581 - 23241619
Alignment:
Q  181 caaacacccaacttcttcacatttaaaatgtatgagctc 219  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  23241581 caaacacccaacttcttcacatttaatatgtgtgagctc 23241619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 23269237 - 23269195
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  23269237 agtgtatattttaacttaagaggggaggggagtgtaattcaag 23269195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 23722057 - 23722099
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  23722057 agtgtatattttaacataagaggggaggggagtgtaattcaag 23722099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 26705675 - 26705717
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  26705675 agtgtatattttaacataagagaggaggggagtgtaattcaag 26705717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 35667289 - 35667331
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  35667289 agtgtatattttaacataagaggggaggggagtgtaattcaag 35667331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 35667572 - 35667614
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| |||||| |||||||||||||    
T  35667572 agtgtatattttaacataagaggggaggaaagtgtaattcaag 35667614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 35667762 - 35667804
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  35667762 agtgtatattttaacataagaggggaggggagtgtaattcaag 35667804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 38720624 - 38720666
Alignment:
Q  54 aagtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    |||||||||||||||| |||||| ||| |||||||||||||||    
T  38720624 aagtgtatattttaacataagagaggatgagagtgtaattcaa 38720666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 41919914 - 41919956
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| |||| |||||||||||||||    
T  41919914 agtgtatattttaacataagagaggagaagagtgtaattcaag 41919956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 219
Target Start/End: Original strand, 43978012 - 43978110
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaactcaaacacccaacttcttcacatttaaaatgtatgagctc 219  Q
    |||| |||||| ||||||| |||||||| ||||||||| | ||| ||||| |||||||| |  |||| | |||||| |||| || || |||||||||||    
T  43978012 tgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttcgaacccgtacactccacttctccacaatttaattgtatgagctc 43978110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 4950003 - 4949962
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    ||||||||||||||| |||||| ||||| |||||||||||||    
T  4950003 agtgtatattttaacataagagaggaggggagtgtaattcaa 4949962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 6371118 - 6371223
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaactcaa-acacccaacttcttcacatttaaaatgtatgagctc 219  Q
    |||| |||||| ||||||| |||||||| ||||||||| | ||||| ||| |||||||| |   |||| | ||||||||||| ||||| ||| |||||||    
T  6371118 tgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttcttcacaattaaattgtgtgagctc 6371217  T
Q  220 cagcca 225  Q
     |||||    
T  6371218 tagcca 6371223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 7479322 - 7479394
Alignment:
Q  27 gagtataaatgttagttttcaag--agtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||| ||| ||||||||  || ||||||||||||||||| |||||| ||| || ||||| |||||||    
T  7479322 gagtataaattttacttttcaagggagggaagtgtatattttaacataagaggggatgaaagtgtgattcaag 7479394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 7797022 - 7796973
Alignment:
Q  48 agagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| ||||||||||||||||| || ||| ||||| ||||||||||||||    
T  7797022 agagggaagtgtatattttaacataggaggggaggggagtgtaattcaag 7796973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 26919534 - 26919429
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaactcaa-acacccaacttcttcacatttaaaatgtatgagctc 219  Q
    |||| |||||| ||||||| |||||||| ||||||||| | |||||  || ||||||||||   |||| | ||||||||||| ||||| ||| |||||||    
T  26919534 tgagcttagctcagttggtagggatattgcatattatatgcaggagctggggttcgaactccggacactccacttcttcacaattaaattgtgtgagctc 26919435  T
Q  220 cagcca 225  Q
     |||||    
T  26919434 tagcca 26919429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 33047235 - 33047276
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    ||||||||||||||| |||||| ||||| |||||||||||||    
T  33047235 agtgtatattttaacataagaggggaggggagtgtaattcaa 33047276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 36099185 - 36099144
Alignment:
Q  184 acacccaacttcttcacatttaaaatgtatgagctccagcca 225  Q
    |||||| |||||| |||||||||||||| |||||||||||||    
T  36099185 acaccccacttctccacatttaaaatgtgtgagctccagcca 36099144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 56309514 - 56309442
Alignment:
Q  26 agagtataaatgttagttttcaagagtga--agtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    ||||||||||| ||| |||||||||| ||  ||||| ||||||||| |||||| ||| || ||||||||||||    
T  56309514 agagtataaattttatttttcaagagagaggagtgtgtattttaacataagaggggatgaaagtgtaattcaa 56309442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 721393 - 721349
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||  |||||| ||||| ||||||||||||||    
T  721393 gaagtgtatattttaatataagaggggaggggagtgtaattcaag 721349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 721985 - 722037
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaagtttatttgag 107  Q
    ||||||||||||||| |||||| ||||  ||||||||||||||| | ||||||    
T  721985 agtgtatattttaacataagaggggagaggagtgtaattcaagtatctttgag 722037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 93
Target Start/End: Original strand, 796991 - 797035
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaatt 93  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||    
T  796991 gagtaaagtgtatattttaacttaagaggggaggggagtgtaatt 797035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 6232496 - 6232448
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| ||||||  |||| ||||||||||||||    
T  6232496 gagtaaagtgtatattttaacttaagaggagaggggagtgtaattcaag 6232448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 6711342 - 6711259
Alignment:
Q  16 ataggggagaagagtataaatgttagttttcaag--agtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||  |||||||||| ||| ||||||||  || || ||||||||||||||  ||||| |||||  |||||||||||||    
T  6711342 ataggggaggggagtataaattttacttttcaagggagggaggtgtatattttaacacaagaggggagggaagtgtaattcaag 6711259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 225
Target Start/End: Original strand, 13161756 - 13161855
Alignment:
Q  126 ttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaa-ctcaaacacccaacttcttcacatttaaaatgtatgagctccagcc 224  Q
    |||||| ||||||| ||||||||||||||| || | ||| ||||| ||||||| | || |||| | ||||| ||||||||||||| | ||||||| ||||    
T  13161756 ttagctcagttggttgggatattacatattttatgcaggggtcggggttcgaaccccagacacaccacttc-tcacatttaaaatttgtgagctctagcc 13161854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 13772389 - 13772429
Alignment:
Q  56 gtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    |||||||||||||| |||||| ||| |||||||||||||||    
T  13772389 gtgtatattttaacataagagaggatgagagtgtaattcaa 13772429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 18362697 - 18362745
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||| ||||||||||||||  |||||| | ||||||||||||||||||    
T  18362697 gagtggagtgtatattttaatataagagggtaggagagtgtaattcaag 18362745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 20545026 - 20545066
Alignment:
Q  57 tgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||| |||||| ||||| ||||||||||||||    
T  20545026 tgtatattttaacataagaggggaggggagtgtaattcaag 20545066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 28464272 - 28464228
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||| |||||| |||||  |||||||||||||    
T  28464272 gaagtgtatattttaacataagaggggagggaagtgtaattcaag 28464228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 35667385 - 35667429
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||| |||||| |||||  |||||||||||||    
T  35667385 gaagtgtatattttaacataagaggggagggaagtgtaattcaag 35667429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 36600229 - 36600181
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||| ||||||||||||||  |||||| | ||||||||||||||||||    
T  36600229 gagtggagtgtatattttaatataagagggtaggagagtgtaattcaag 36600181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 37147810 - 37147766
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||| |||||| ||||  ||||||||||||||    
T  37147810 gaagtgtatattttaacataagaggggagaggagtgtaattcaag 37147766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 38413560 - 38413596
Alignment:
Q  143 gatattacatattatacgtaggagtcggagttcgaac 179  Q
    |||||| |||||||||||||| |||||||||||||||    
T  38413560 gatattgcatattatacgtagaagtcggagttcgaac 38413596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 46096119 - 46096167
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||| | ||||||||||||||    
T  46096119 gagtaaagtgtatattttaacttaagaggggaagggagtgtaattcaag 46096167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 46138620 - 46138668
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||| | ||||||||||||||    
T  46138620 gagtaaagtgtatattttaacttaagaggggaagggagtgtaattcaag 46138668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 1262509 - 1262426
Alignment:
Q  16 ataggggagaagagtataaatgttagttttcaagagtgaag--tgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||| |||||||||| ||| |||||||||| | ||  ||||||||||||| |||||| ||||| ||||||||||||||    
T  1262509 ataggggagaggagtataaattttacttttcaagagaggagagtgtatattttaacataagaggggaggggagtgtaattcaag 1262426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 30605344 - 30605392
Alignment:
Q  48 agagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    |||| ||||||||||||||||| |||||||||||| |||||||||||||    
T  30605344 agagggaagtgtatattttaacataagagtggaggggagtgtaattcaa 30605392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 27255356 - 27255314
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  27255356 agtgtatattttaacataagaggggaggagagtgtaattcaag 27255314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 4757066 - 4757025
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    ||||||||||||||| |||||| |||||||||||||||||||    
T  4757066 agtgtatattttaacttaagaggggaggagagtgtaattcaa 4757025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 8964842 - 8964737
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaact-caaacacccaacttcttcacatttaaaatgtatgagctc 219  Q
    ||||||||||| ||||||| |||||||| ||||| ||| | ||||| ||| ||||||||| | ||||| | |||||| |||| ||||| ||| |||||||    
T  8964842 tgagtttagctcagttggtagggatattgcatatcatatgcaggagccggggttcgaactccgaacactccacttctccacaattaaattgtgtgagctc 8964743  T
Q  220 cagcca 225  Q
     |||||    
T  8964742 tagcca 8964737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 31586951 - 31587056
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaa-ctcaaacacccaacttcttcacatttaaaatgtatgagctc 219  Q
    |||| |||||| ||||||| |||||||| ||||||||| | ||| ||||||||||||| | |  |||||| |||||| |||| ||||| ||| |||||||    
T  31586951 tgagcttagctcagttggtagggatattgcatattatatgcaggggtcggagttcgaatcccggacaccccacttctccacaattaaattgtgtgagctc 31587050  T
Q  220 cagcca 225  Q
     |||||    
T  31587051 tagcca 31587056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 44500041 - 44500090
Alignment:
Q  48 agagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| ||||||||||||||||| |||||| ||||| ||||||||||||||    
T  44500041 agagggaagtgtatattttaacataagaggggaggggagtgtaattcaag 44500090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 49080058 - 49079989
Alignment:
Q  27 gagtataaatgttagttttcaagagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    |||||||||| ||| |||||||| | |  | |||||||||||| |||||| |||||||||||||||||||    
T  49080058 gagtataaatcttacttttcaagggaggggagtatattttaacataagaggggaggagagtgtaattcaa 49079989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 54403660 - 54403588
Alignment:
Q  27 gagtataaatgttagttttcaag--agtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||| | ||| ||||||||  || ||||||||||||||||| |||||| ||||| ||||||||||||||    
T  54403660 gagtataacttttacttttcaagggagggaagtgtatattttaacataagaggggaggggagtgtaattcaag 54403588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 4757175 - 4757127
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| ||||||| |||||||| ||||||||||||||| |||||||||||    
T  4757175 gagtaaagtgtagattttaacataagagtggaggagaatgtaattcaag 4757127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 11056559 - 11056607
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||||||    
T  11056559 gagtaaagtgtatattttaacttaagaggggaggggagtgtaattcaag 11056607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 14600454 - 14600406
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||||||| |||| | ||||| ||||||||||||||    
T  14600454 gagtgaagtgtatattttaacataagtggggaggggagtgtaattcaag 14600406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 22130396 - 22130444
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||||||    
T  22130396 gagtaaagtgtatattttaacttaagaggggaggggagtgtaattcaag 22130444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 23309013 - 23308965
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||||||    
T  23309013 gagtaaagtgtatattttaacttaagaggggaggggagtgtaattcaag 23308965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 97
Target Start/End: Original strand, 1263063 - 1263106
Alignment:
Q  54 aagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||||||||| |||||| ||||| ||||||||||||||    
T  1263063 aagtgtatattttaacataagaggggaggggagtgtaattcaag 1263106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 11397699 - 11397616
Alignment:
Q  16 ataggggagaagagtataaatgttagttttcaagag-tga-agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||  |||||||||| ||| |||||||| | ||| ||||||||||||||| |||||| |||||  |||||||||||||    
T  11397699 ataggggagtggagtataaattttacttttcaagggatgagagtgtatattttaacataagaggggagggaagtgtaattcaag 11397616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 13623274 - 13623204
Alignment:
Q  29 gtataaatgttagttttcaag--agtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||| ||| ||||||||  || ||||||||||||||||| |||||| |||||  |||||||||||||    
T  13623274 gtataaattttaattttcaagggagggaagtgtatattttaacataagaggggagggaagtgtaattcaag 13623204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 121 - 219
Target Start/End: Original strand, 15975156 - 15975255
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac-tcaaacacccaacttcttcacatttaaaatgtatgagctc 219  Q
    |||| |||||| ||||||| |||||||| ||||||||| | ||||| ||| |||||||| ||  |||| | ||||||||||| ||||| ||| |||||||    
T  15975156 tgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaacctcggacactccacttcttcacaattaaattgtgtgagctc 15975255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 57 - 96
Target Start/End: Complemental strand, 16067293 - 16067254
Alignment:
Q  57 tgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  16067293 tgtatattttaacataagaggggaggagagtgtaattcaa 16067254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 41587316 - 41587371
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaagtttatttgagagg 110  Q
    ||||||||||||||| |||||| ||||  ||||||||||||||| | |||||||||    
T  41587316 agtgtatattttaacataagaggggagaggagtgtaattcaagtatctttgagagg 41587371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 2756612 - 2756654
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  2756612 agtgtatattttaacataagaggggaggggagtgtaattcaag 2756654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 4558103 - 4558061
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  4558103 agtgtatattttaacttaagaggggaggggagtgtaattcaag 4558061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 4640541 - 4640447
Alignment:
Q  126 ttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac-tcaaacacccaacttcttcacatttaaaatgtatgagctc 219  Q
    |||||| ||||||| |||||||| ||||||||| | |||||  || |||||||| || ||||| | ||||||||||| ||||| ||| |||||||    
T  4640541 ttagctcagttggtagggatattgcatattatatgcaggagctggggttcgaacctcgaacactccacttcttcacaattaaattgtgtgagctc 4640447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 8762146 - 8762088
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac 179  Q
    |||| ||| |||||||||| |||||||||||||||||| | ||| ||||| ||||||||    
T  8762146 tgagcttaacttagttggtagggatattacatattatatgcaggtgtcggggttcgaac 8762088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 10887781 - 10887739
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  10887781 agtgtatattttaacttaagaggggaggggagtgtaattcaag 10887739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 11345364 - 11345406
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  11345364 agtgtatattttaacataagaggggaggggagtgtaattcaag 11345406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 179
Target Start/End: Original strand, 11820008 - 11820066
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac 179  Q
    |||| |||||| ||||||| |||||||| ||| ||||| ||||||||||| ||||||||    
T  11820008 tgagcttagctcagttggtagggatattgcatgttatatgtaggagtcggggttcgaac 11820066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 179
Target Start/End: Original strand, 18194342 - 18194400
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac 179  Q
    ||||||||||| ||||||| |||||||| ||||||||| | ||||| ||| ||||||||    
T  18194342 tgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaac 18194400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 18364701 - 18364659
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  18364701 agtgtatattttaacataagaggggaggggagtgtaattcaag 18364659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 18365286 - 18365328
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  18365286 agtgtatattttaacataagaggggaggggagtgtaattcaag 18365328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 45241272 - 45241230
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  45241272 agtgtatattttaacataagagaggaggggagtgtaattcaag 45241230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 219
Target Start/End: Original strand, 52945899 - 52945997
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaactcaaacacccaacttcttcacatttaaaatgtatgagctc 219  Q
    |||| |||||| ||||||| |||||||| ||||||||| | ||| ||||| |||||||| |  |||| | |||||| |||| || || |||||||||||    
T  52945899 tgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttcgaacccgtacactccacttctccacaatttaattgtatgagctc 52945997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 54605833 - 54605791
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  54605833 agtgtatattttaacataagaggggaggggagtgtaattcaag 54605791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 54769896 - 54769838
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac 179  Q
    |||| |||||||||||||| |||||||| ||||||||| | ||| | ||||||||||||    
T  54769896 tgagcttagcttagttggtagggatattgcatattatatgcaggtgccggagttcgaac 54769838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 25883990 - 25883949
Alignment:
Q  184 acacccaacttcttcacatttaaaatgtatgagctccagcca 225  Q
    |||||| |||||| |||||||||||||| |||||||||||||    
T  25883990 acaccccacttctccacatttaaaatgtgtgagctccagcca 25883949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 27329934 - 27329893
Alignment:
Q  184 acacccaacttcttcacatttaaaatgtatgagctccagcca 225  Q
    |||||| |||||| |||||||||||||| |||||||||||||    
T  27329934 acaccccacttctccacatttaaaatgtgtgagctccagcca 27329893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 31529024 - 31528919
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaactcaa-acacccaacttcttcacatttaaaatgtatgagctc 219  Q
    |||| |||||| ||||||| ||||||||  |||||||| | ||||||||| |||||||| |   |||| | |||||| |||| ||||| |||||||||||    
T  31529024 tgagcttagctcagttggtagggatattgaatattatatgcaggagtcggggttcgaaccccggacactccacttctccacaattaaattgtatgagctc 31528925  T
Q  220 cagcca 225  Q
     |||||    
T  31528924 tagcca 31528919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 228
Target Start/End: Complemental strand, 37076284 - 37076239
Alignment:
Q  183 aacacccaacttcttcacatttaaaatgtatgagctccagccatta 228  Q
    ||||||| ||||||| | ||||||||||| ||||||||||||||||    
T  37076284 aacaccctacttctttatatttaaaatgtgtgagctccagccatta 37076239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 37183149 - 37183108
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    ||||||||||||||| |||||| ||||| |||||||||||||    
T  37183149 agtgtatattttaacttaagaggggaggggagtgtaattcaa 37183108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 37183759 - 37183820
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaagtttatttgagagg 110  Q
    |||| |||||||||||||||| |||||| ||| | ||||||||||||||  | |||||||||    
T  37183759 gagtaaagtgtatattttaacttaagaggggacgggagtgtaattcaagcatttttgagagg 37183820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 39719939 - 39720044
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaa-ctcaaacacccaacttcttcacatttaaaatgtatgagctc 219  Q
    ||||||||||| ||||||| |||||||| ||||||||| | ||| | ||| ||||||| | |  |||||| |||||| |||| ||||| ||| |||||||    
T  39719939 tgagtttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgagctc 39720038  T
Q  220 cagcca 225  Q
     |||||    
T  39720039 tagcca 39720044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 201
Target Start/End: Complemental strand, 42496435 - 42496355
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaa-ctcaaacacccaacttcttcaca 201  Q
    ||||||||||||||||||| |  ||||| ||||||||| ||||| ||||| ||||||| | ||||||||| |||||| ||||    
T  42496435 tgagtttagcttagttggtagaaatattgcatattatatgtaggggtcgg-gttcgaaccccaaacaccctacttctccaca 42496355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 51879163 - 51879204
Alignment:
Q  184 acacccaacttcttcacatttaaaatgtatgagctccagcca 225  Q
    |||||| |||||| |||||||||||||| |||||||||||||    
T  51879163 acaccccacttctccacatttaaaatgtgtgagctccagcca 51879204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 54606320 - 54606373
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaagtttat 102  Q
    |||| ||||||| |||||||| |||||| ||||| |||||||||||||| ||||    
T  54606320 gagtaaagtgtagattttaacataagaggggaggggagtgtaattcaagcttat 54606373  T

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Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 225
Target Start/End: Original strand, 2106101 - 2106133
Alignment:
Q  193 ttcttcacatttaaaatgtatgagctccagcca 225  Q
    ||||||||||||||||||| |||||||||||||    
T  2106101 ttcttcacatttaaaatgtgtgagctccagcca 2106133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 3089821 - 3089769
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaagtttatttgag 107  Q
    ||||||||||||||| |||||| |||||  |||||||||||||| | ||||||    
T  3089821 agtgtatattttaacataagaggggagggaagtgtaattcaagtatctttgag 3089769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 4558738 - 4558786
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||| |||| |||||||||    
T  4558738 gagtaaagtgtatattttaacttaagaggggaggggagtataattcaag 4558786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 7725405 - 7725453
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||||||| ||||||  | || ||||||||||||||    
T  7725405 gagtgaagtgtatattttaacataagaggagtggggagtgtaattcaag 7725453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 93
Target Start/End: Original strand, 10888403 - 10888447
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaatt 93  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||    
T  10888403 gagtaaagtgtatattttaacttaagaggggaggggagtgtaatt 10888447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 11388969 - 11389017
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| ||||||| |||||||| |||||| |||||||| |||||||||||    
T  11388969 gagtaaagtgtagattttaacataagaggggaggagaatgtaattcaag 11389017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 27255977 - 27256021
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||  |||||| ||||| ||||||||||||||    
T  27255977 gaagtgtatattttaatataagaggggaggggagtgtaattcaag 27256021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 27395074 - 27395122
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||| ||||||||||||||| |||||| ||||| || |||||||||||    
T  27395074 gagtggagtgtatattttaacataagaggggaggggaatgtaattcaag 27395122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 29559728 - 29559644
Alignment:
Q  133 agttggtcgggatattacatattatacgtaggagtcggagttcgaact-caaacacccaacttcttcacatttaaaatgtatgag 216  Q
    ||||||| |||||||| ||||||||| ||||  ||||| ||| ||||| |  |||||| |||||| |||||||||||||| ||||    
T  29559728 agttggtagggatattgcatattatatgtagaggtcggggtttgaacttcggacaccccacttctccacatttaaaatgtgtgag 29559644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 36472456 - 36472392
Alignment:
Q  162 aggagtcggagttcgaactc-aaacacccaacttcttcacatttaaaatgtatgagctccagcca 225  Q
    |||||||||  ||||||||| ||||| || |||||| |||||| ||||||| |||||||||||||    
T  36472456 aggagtcgggattcgaactccaaacaacccacttctccacattaaaaatgtgtgagctccagcca 36472392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 229
Target Start/End: Original strand, 39300388 - 39300495
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaactcaaacacccaacttcttcacatttaaaatgtatgagctcc 220  Q
    |||| |||||| ||||||| |||||||||||| ||||| | |||||  || |||||||| |  |||| | | ||||||||| ||||| ||| |||||||     
T  39300388 tgagcttagctcagttggtagggatattacattttata-gcaggagctggggttcgaaccccgacactccatttcttcacaattaaattgtgtgagctct 39300486  T
Q  221 agccattat 229  Q
    |||||||||    
T  39300487 agccattat 39300495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 39709087 - 39709147
Alignment:
Q  165 agtcggagttcgaactcaaacacccaacttcttcacatttaaaatgtatgagctccagcca 225  Q
    |||| |||||||||| |  |||| | |||||| |||||||||||||| |||||||||||||    
T  39709087 agtcagagttcgaaccccgacactccacttctccacatttaaaatgtgtgagctccagcca 39709147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 40036360 - 40036443
Alignment:
Q  16 ataggggagaagagtataaatgttagttttcaag--agtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||  |||||||||| ||| ||| ||||  || | ||||||||||||||| |||||| ||||| || |||||||||||    
T  40036360 ataggggaggggagtataaattttactttgcaagggaggggagtgtatattttaacataagaggggaggggaatgtaattcaag 40036443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 41865054 - 41865006
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| | | ||||||||||||||||    
T  41865054 gagtaaagtgtatattttaacttaagagggaatgagagtgtaattcaag 41865006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 48223633 - 48223589
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||| |||||  |||||| |||||||||||||    
T  48223633 gaagtgtatattttaacataagaagggaggaaagtgtaattcaag 48223589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 48224140 - 48224184
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||| |||||  ||||| ||||||||||||||    
T  48224140 gaagtgtatattttaacataagatgggaggggagtgtaattcaag 48224184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 49764563 - 49764519
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||| |||||| |||||  |||||||||||||    
T  49764563 gaagtgtatattttaacataagaggggagggaagtgtaattcaag 49764519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 54404127 - 54404175
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| ||||||| |||||||| |||||| ||||| ||||||||||||||    
T  54404127 gagtaaagtgtagattttaacataagaggggaggggagtgtaattcaag 54404175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 351378 - 351296
Alignment:
Q  16 ataggggagaagagtataaatgttagttttcaag--agtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    |||||||||  |||||||||||||| ||||||||  |||||||||||||||||||| |||||| | || ||| ||||||||||    
T  351378 ataggggaggggagtataaatgttatttttcaagggagtgaagtgtatattttaacataagagagaagaagattgtaattcaa 351296  T

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Target: scaffold0068 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 59359 - 59287
Alignment:
Q  27 gagtataaatgttagttttcaag--agtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||| ||| ||||||||  || | ||||||||||||||| |||||| ||||||||||||||||||||    
T  59359 gagtataaattttacttttcaagggaggggagtgtatattttaacataagaggggaggagagtgtaattcaag 59287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 24778061 - 24778016
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaagt 98  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||    
T  24778061 gaagtgtatattttaacataagaggggaggagagtgtaattcaagt 24778016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 37266118 - 37266186
Alignment:
Q  27 gagtataaatgttagttttcaag--agtgaagtgtatattttaacgtaagagtggaggagagtgtaatt 93  Q
    |||||||||| ||| ||||||||  |||| ||||||||||||||| |||||| ||||||||||||||||    
T  37266118 gagtataaatcttacttttcaagggagtggagtgtatattttaacataagaggggaggagagtgtaatt 37266186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 14879632 - 14879550
Alignment:
Q  16 ataggggagaagagtataaatgttagttttcaagagt--gaagtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    |||||||||  |||||||||| ||| |||||||| |   ||| ||||||||||||| |||||| |||||||||||||||||||    
T  14879632 ataggggaggggagtataaattttacttttcaagggacggaaatgtatattttaacataagaggggaggagagtgtaattcaa 14879550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 44284317 - 44284398
Alignment:
Q  18 aggggagaagagtataaatgttagttttcaagagtg--aagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||  |||||||||| ||| |||||||| | |  |||||||||||||||| |||||| ||||| ||||||||||||||    
T  44284317 aggggaggggagtataaattttatttttcaagggaggaaagtgtatattttaacataagaggggaggggagtgtaattcaag 44284398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 14880192 - 14880236
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||| |||||| ||||| ||||||||||||||    
T  14880192 gaagtgtatattttaacataagaggggaggggagtgtaattcaag 14880236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 25597850 - 25597802
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||||||    
T  25597850 gagtaaagtgtatattttaacttaagagaggaggggagtgtaattcaag 25597802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 29636386 - 29636434
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||| ||||||||||||||| |||||| ||||| ||||||||||||||    
T  29636386 gagtggagtgtatattttaacttaagaggggaggggagtgtaattcaag 29636434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 32904223 - 32904267
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||| |||||| ||||| ||||||||||||||    
T  32904223 gaagtgtatattttaacataagaggggaggggagtgtaattcaag 32904267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 40791147 - 40791076
Alignment:
Q  27 gagtataaatgttagttttcaag--agtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    |||||||||| ||| ||||||||  || | ||||||||||||||| |||||| |||||||||| ||||||||    
T  40791147 gagtataaattttacttttcaagggagggtagtgtatattttaacataagaggggaggagagtataattcaa 40791076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 5551655 - 5551569
Alignment:
Q  26 agagtataaatgttagttttcaagagtgaag--tgtatattttaacgtaagagtggaggagagtgtaattcaagtttatttgagagg 110  Q
    ||||||||||| ||| |||||||| | | ||  ||||||||||| | |||||| ||||||||||||||||||||  | |||||||||    
T  5551655 agagtataaattttacttttcaagggaggagattgtatattttagcataagagaggaggagagtgtaattcaagcatctttgagagg 5551569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 121 - 207
Target Start/End: Complemental strand, 8698646 - 8698559
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaa-ctcaaacacccaacttcttcacatttaaa 207  Q
    |||| |||||| ||||||| |||||||| ||||||||| ||||| || || ||||||| | |  |||||| |||||||||||||||||    
T  8698646 tgagcttagctcagttggtagggatattgcatattatatgtaggggttggggttcgaatcccggacaccccacttcttcacatttaaa 8698559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 98
Target Start/End: Complemental strand, 11140165 - 11140122
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaagt 98  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||    
T  11140165 agtgtatattttaacataagaggggaggggagtgtaattcaagt 11140122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 17564780 - 17564698
Alignment:
Q  16 ataggggagaagagtataaatgttagttttcaag--agtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    |||||||||  |||||||||| ||| ||||||||  || | ||||||||||||||| |||||| |||||  ||||||||||||    
T  17564780 ataggggaggggagtataaattttacttttcaagggaggggagtgtatattttaacataagaggggagggaagtgtaattcaa 17564698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 25598463 - 25598518
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaagtttatttgagagg 110  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||  | |||||||||    
T  25598463 agtgtatattttaacttaagaggggaggggagtgtaattcaagcatctttgagagg 25598518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 97
Target Start/End: Original strand, 34679929 - 34679972
Alignment:
Q  54 aagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||||||||||||||| || ||| ||||||||||||||||||||    
T  34679929 aagtgtatattttaacatacgaggggaggagagtgtaattcaag 34679972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 94577 - 94519
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac 179  Q
    |||| |||||| ||||||| |||||||| ||||||||| | ||||| ||||||||||||    
T  94577 tgagcttagctcagttggtagggatattgcatattatatgcaggagccggagttcgaac 94519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 1632506 - 1632448
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac 179  Q
    |||| |||||| ||||||| || ||||||||||||||| | ||||||||| ||||||||    
T  1632506 tgagcttagctcagttggtaggaatattacatattatatgcaggagtcggggttcgaac 1632448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 3075377 - 3075335
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  3075377 agtgtatattttaacataagaggggaggggagtgtaattcaag 3075335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 8442726 - 8442672
Alignment:
Q  56 gtgtatattttaacgtaagagtggaggagagtgtaattcaagtttatttgagagg 110  Q
    |||||||||||||| |||||| ||| ||||||||||||||||  | |||||||||    
T  8442726 gtgtatattttaacataagaggggaagagagtgtaattcaagcatctttgagagg 8442672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 11760073 - 11760115
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| |||||||| |||||||||||    
T  11760073 agtgtatattttaacataagagaggaggagaatgtaattcaag 11760115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 13105154 - 13105204
Alignment:
Q  179 ctcaaacacccaacttcttcacatttaaaatgtatgagctccagccattat 229  Q
    |||| |||||| |||||| |||||||||||||| |||||||||| ||||||    
T  13105154 ctcagacaccccacttctccacatttaaaatgtgtgagctccagtcattat 13105204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 14363846 - 14363804
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  14363846 agtgtatattttaacttaagaggggaggggagtgtaattcaag 14363804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 22274677 - 22274619
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac 179  Q
    ||||||||||| ||||||| |||||||| ||||||||| | ||||| ||| ||||||||    
T  22274677 tgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaac 22274619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 22934360 - 22934318
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  22934360 agtgtatattttaacttaagaggggaggggagtgtaattcaag 22934318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 36016729 - 36016807
Alignment:
Q  20 gggagaagagtataaatgttagttttcaagagtga-agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||| ||||||||||| ||| |||||||| | |  ||||||||||||||| |||||| ||||| || |||||||||||    
T  36016729 gggaggagagtataaattttacttttcaagggagggagtgtatattttaacataagagaggaggggattgtaattcaag 36016807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 39998441 - 39998399
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||    
T  39998441 agtgtgtattttaacttaagaggggaggagagtgtaattcaag 39998399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 43284032 - 43283974
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac 179  Q
    ||||||||||| ||||||| |||||||| ||||||||| | ||||| ||| ||||||||    
T  43284032 tgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaac 43283974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 100
Target Start/End: Original strand, 8438542 - 8438618
Alignment:
Q  26 agagtataaatgttagttttcaa--gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaagttt 100  Q
    ||||||||||| ||| |||||||  ||| | ||||||||||||||| |||||| | ||  |||||||||||||||||    
T  8438542 agagtataaattttatttttcaatagaggggagtgtatattttaacataagagagaagtggagtgtaattcaagttt 8438618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 25485432 - 25485473
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    ||||||||||||||| |||||| ||||| |||||||||||||    
T  25485432 agtgtatattttaacttaagaggggaggggagtgtaattcaa 25485473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 31024362 - 31024403
Alignment:
Q  184 acacccaacttcttcacatttaaaatgtatgagctccagcca 225  Q
    |||||| |||||| |||||||||||||| |||||||||||||    
T  31024362 acaccccacttctccacatttaaaatgtgtgagctccagcca 31024403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 33810708 - 33810749
Alignment:
Q  184 acacccaacttcttcacatttaaaatgtatgagctccagcca 225  Q
    |||||| |||||| |||||||||||||| |||||||||||||    
T  33810708 acaccccacttctccacatttaaaatgtgtgagctccagcca 33810749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 33838328 - 33838433
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaact-caaacacccaacttcttcacatttaaaatgtatgagctc 219  Q
    ||||||||||| ||||||| |||||||| || |||||| |||| || ||| ||||||||| || |||| | | |||| |||| ||||| ||| |||||||    
T  33838328 tgagtttagctcagttggtagggatattgcaaattatatgtagaagccggggttcgaactccagacactccatttctccacaattaaattgtgtgagctc 33838427  T
Q  220 cagcca 225  Q
     |||||    
T  33838428 tagcca 33838433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 34873154 - 34873195
Alignment:
Q  184 acacccaacttcttcacatttaaaatgtatgagctccagcca 225  Q
    |||||| |||||| |||||||||||||| |||||||||||||    
T  34873154 acaccccacttctccacatttaaaatgtgtgagctccagcca 34873195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 36035181 - 36035140
Alignment:
Q  184 acacccaacttcttcacatttaaaatgtatgagctccagcca 225  Q
    |||||| |||||| |||||||||||||| |||||||||||||    
T  36035181 acaccccacttctccacatttaaaatgtgtgagctccagcca 36035140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 110
Target Start/End: Original strand, 37837581 - 37837638
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaagtttatttgagagg 110  Q
    ||||||||||||||||  |||||| |||||||| |||||||||||  | |||||||||    
T  37837581 gaagtgtatattttaagataagaggggaggagaatgtaattcaagcatctttgagagg 37837638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 44053442 - 44053401
Alignment:
Q  184 acacccaacttcttcacatttaaaatgtatgagctccagcca 225  Q
    |||||| |||||| |||||||||||||| |||||||||||||    
T  44053442 acaccccacttctccacatttaaaatgtgtgagctccagcca 44053401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 6099484 - 6099524
Alignment:
Q  57 tgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||| ||||||  |||||||||||||||||||    
T  6099484 tgtatattttaacataagaggagaggagagtgtaattcaag 6099524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 6293205 - 6293245
Alignment:
Q  57 tgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||| |||||| ||||| ||||||||||||||    
T  6293205 tgtatattttaacttaagaggggaggggagtgtaattcaag 6293245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 8297176 - 8297128
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| |||||||||||||||| |||||| |||||  |||||||||||||    
T  8297176 gagtaaagtgtatattttaacttaagaggggagggaagtgtaattcaag 8297128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 8297806 - 8297846
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaatt 93  Q
    ||||||||||||||||| |||||| ||||| ||||||||||    
T  8297806 gaagtgtatattttaacttaagaggggaggggagtgtaatt 8297846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 8443290 - 8443373
Alignment:
Q  16 ataggggagaagagtataaatgttagttttcaa--gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||| ||||||||||| ||| |||||||  ||  ||||||||||||||||| ||||||   ||| ||||||||| ||||    
T  8443290 ataggggaggagagtataaattttacttttcaagggaaggaagtgtatattttaacataagaggataggggagtgtaatacaag 8443373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 93
Target Start/End: Complemental strand, 10215529 - 10215485
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaatt 93  Q
    |||| |||||||||||||||| |||||| ||||| ||||||||||    
T  10215529 gagtaaagtgtatattttaacttaagaggggaggggagtgtaatt 10215485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 14094119 - 14094198
Alignment:
Q  20 gggagaagagtataaatgttagttttcaag--agtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||| ||||||||||| ||  ||||||||  || | |||||| |||||||| |||||| ||||| ||||||||||||||    
T  14094119 gggaggagagtataaatttttcttttcaagggaggggagtgtaaattttaacataagaggggaggggagtgtaattcaag 14094198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 24809656 - 24809616
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaatt 93  Q
    ||||||||||||||||| |||||| ||||| ||||||||||    
T  24809656 gaagtgtatattttaacataagaggggaggggagtgtaatt 24809616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 32905331 - 32905375
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||| ||| |  ||||||||||||||||||||    
T  32905331 gaagtgtatattttaacataaaaagggaggagagtgtaattcaag 32905375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 41312388 - 41312428
Alignment:
Q  57 tgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||| |||||| ||||| ||||||||||||||    
T  41312388 tgtatattttaacataagaggggaggggagtgtaattcaag 41312428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 93
Target Start/End: Complemental strand, 44283770 - 44283726
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaatt 93  Q
    ||||||||||||||||||||| |||||| || || ||||||||||    
T  44283770 gagtgaagtgtatattttaacataagaggggtggggagtgtaatt 44283726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2113 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold2113
Description:

Target: scaffold2113; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 795 - 753
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||||||||| ||||||||||||||    
T  795 agtgtatattttaacttaagagtggaggggagtgtaattcaag 753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 95
Target Start/End: Complemental strand, 13531 - 13485
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattca 95  Q
    |||| |||||||||||||||| |||||| ||||||||||||||||||    
T  13531 gagtaaagtgtatattttaacttaagaggggaggagagtgtaattca 13485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 98
Target Start/End: Original strand, 11263 - 11306
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaagt 98  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||    
T  11263 agtgtatattttaacataagagcggaggggagtgtaattcaagt 11306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 179
Target Start/End: Original strand, 8970 - 9028
Alignment:
Q  121 tgagtttagcttagttggtcgggatattacatattatacgtaggagtcggagttcgaac 179  Q
    |||| |||||| ||||||| |||||||| ||||||||| | ||||| ||||||||||||    
T  8970 tgagcttagctcagttggtagggatattgcatattatatgcaggagccggagttcgaac 9028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 3477 - 3435
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||||| ||||||||||||    
T  3477 agtgtatattttaacataagaggggaggagtgtgtaattcaag 3435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 4051 - 4095
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||| |||||  ||||| ||||||||||||||    
T  4051 gaagtgtatattttaacataagatgggaggggagtgtaattcaag 4095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 11358 - 11316
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| |||||| |||||||||||||    
T  11358 agtgtatattttaacataagaggggaggaaagtgtaattcaag 11316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 33344 - 33402
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaagtttatttgag 107  Q
    |||| |||||||||||||||| |||||| | ||| ||||||||||||||| | ||||||    
T  33344 gagtaaagtgtatattttaacttaagagggaaggggagtgtaattcaagtatctttgag 33402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 19652 - 19694
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||    
T  19652 agtgtatattttaacttaagaggggaggggagtgtaattcaag 19694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 34313 - 34362
Alignment:
Q  48 agagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| ||||||||||||||||| |||||| ||||| ||| ||||||||||    
T  34313 agagggaagtgtatattttaacttaagaggggaggggagcgtaattcaag 34362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 421216 - 421175
Alignment:
Q  55 agtgtatattttaacgtaagagtggaggagagtgtaattcaa 96  Q
    ||||||||||||||| |||||| ||||| |||||||||||||    
T  421216 agtgtatattttaacataagaggggaggggagtgtaattcaa 421175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 2329 - 2250
Alignment:
Q  20 gggagaagagtataaatgttagttttcaag--agtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||| ||||||||||| ||  ||||||||  || | |||||| |||||||| |||||| ||||| ||||||||||||||    
T  2329 gggaggagagtataaatttttcttttcaagggaggggagtgtaaattttaacataagaggggaggggagtgtaattcaag 2250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 27006 - 27050
Alignment:
Q  53 gaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    ||||||||||||||||| |||||| ||||  ||||||||||||||    
T  27006 gaagtgtatattttaacataagaggggagatgagtgtaattcaag 27050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 18742 - 18790
Alignment:
Q  49 gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaag 97  Q
    |||| ||||||| |||||||| |||||| ||||| ||||||||||||||    
T  18742 gagtaaagtgtagattttaacttaagaggggaggggagtgtaattcaag 18790  T

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Target: scaffold0043 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 67814 - 67739
Alignment:
Q  27 gagtataaatgttagttttcaa--gagtgaagtgtatattttaacgtaagagtggaggagagtgtaattcaagttt 100  Q
    |||||||||| ||| |||||||  |||  |||||||||||||| | |||||| ||||| |||||||||||| ||||    
T  67814 gagtataaattttacttttcaaaggagaaaagtgtatattttatcataagaggggaggggagtgtaattcatgttt 67739  T

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