View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16569_high_74 (Length: 262)
Name: NF16569_high_74
Description: NF16569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16569_high_74 |
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Alignment Details
Target: chr1 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 18 - 247
Target Start/End: Original strand, 37979040 - 37979269
Alignment:
| Q |
18 |
gaagagatgggaataaccattcagatcttgaaatctaaatcatgcaatattttattcaattcatctgttttccttcttacttttcttgtatctttttatt |
117 |
Q |
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| T |
37979040 |
gaagagatgggaataaccattcagatcttgaaatctaaatcatgcaatattttattcaattcatctgtttttcttcttacttttcttgtatctttttatt |
37979139 |
T |
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| Q |
118 |
tatctaagaagcttgcatgtttctacacatggcatgtctctacactgactagtgactactaaactgnnnnnnngttttctccctgccattccccttaatt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
37979140 |
tatctaagaagcttgcatgtttctacacatggcatgtctctacactgactagtgactactaaactgtttttttgttttctccctgccattccccttaatt |
37979239 |
T |
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| Q |
218 |
catattgtattagggaaagaggatgggtat |
247 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
37979240 |
catattgtattagggaaagaggatgggtat |
37979269 |
T |
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