View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16569_high_87 (Length: 246)

Name: NF16569_high_87
Description: NF16569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16569_high_87
NF16569_high_87
[»] chr1 (31 HSPs)
chr1 (112-240)||(5979710-5979838)
chr1 (1-111)||(27564653-27564762)
chr1 (4-111)||(41758881-41758987)
chr1 (1-107)||(50630531-50630636)
chr1 (1-111)||(9474794-9474903)
chr1 (1-111)||(48716200-48716309)
chr1 (4-107)||(32813323-32813425)
chr1 (1-111)||(2581988-2582097)
chr1 (10-110)||(37649280-37649379)
chr1 (1-95)||(38632255-38632348)
chr1 (1-111)||(47452238-47452347)
chr1 (1-111)||(8346305-8346415)
chr1 (1-111)||(43205-43314)
chr1 (10-107)||(49811449-49811545)
chr1 (1-112)||(3000392-3000502)
chr1 (4-91)||(45044498-45044584)
chr1 (1-111)||(38595227-38595336)
chr1 (1-107)||(51898605-51898710)
chr1 (1-61)||(44548343-44548403)
chr1 (4-95)||(37926372-37926462)
chr1 (1-107)||(44454052-44454161)
chr1 (6-95)||(11152312-11152400)
chr1 (4-81)||(5958948-5959024)
chr1 (4-81)||(50590948-50591024)
chr1 (1-111)||(26274505-26274611)
chr1 (1-62)||(13414834-13414895)
chr1 (4-107)||(41608415-41608517)
chr1 (1-107)||(6260943-6261048)
chr1 (4-107)||(47748518-47748620)
chr1 (4-81)||(44332319-44332395)
chr1 (1-54)||(48489373-48489426)
[»] chr8 (30 HSPs)
chr8 (1-111)||(12831120-12831229)
chr8 (1-111)||(504039-504148)
chr8 (1-112)||(23122514-23122624)
chr8 (1-111)||(14547995-14548104)
chr8 (1-111)||(34012214-34012323)
chr8 (1-113)||(15197406-15197517)
chr8 (3-107)||(40423865-40423968)
chr8 (1-107)||(8841354-8841459)
chr8 (1-111)||(9122258-9122367)
chr8 (1-111)||(44507006-44507114)
chr8 (4-107)||(43414503-43414605)
chr8 (1-107)||(5957903-5958008)
chr8 (10-111)||(1179858-1179958)
chr8 (1-107)||(10284553-10284658)
chr8 (25-111)||(42710212-42710297)
chr8 (4-107)||(4854785-4854887)
chr8 (1-107)||(37038552-37038657)
chr8 (16-107)||(42354510-42354600)
chr8 (4-95)||(15048115-15048206)
chr8 (4-108)||(24307714-24307817)
chr8 (4-107)||(16056323-16056425)
chr8 (9-56)||(10621059-10621106)
chr8 (4-107)||(32707925-32708029)
chr8 (4-108)||(30479395-30479498)
chr8 (7-107)||(34307295-34307394)
chr8 (1-54)||(15258903-15258956)
chr8 (4-73)||(16383453-16383521)
chr8 (1-54)||(20074916-20074969)
chr8 (4-81)||(25838265-25838341)
chr8 (1-54)||(40467773-40467826)
[»] chr6 (20 HSPs)
chr6 (1-111)||(22880576-22880685)
chr6 (1-111)||(11427691-11427800)
chr6 (1-111)||(17598627-17598736)
chr6 (1-111)||(32869751-32869860)
chr6 (1-111)||(29857900-29858009)
chr6 (7-107)||(31976327-31976426)
chr6 (1-111)||(6209384-6209492)
chr6 (1-111)||(23128044-23128154)
chr6 (3-91)||(28536426-28536513)
chr6 (4-107)||(31110683-31110785)
chr6 (3-107)||(31952952-31953055)
chr6 (4-107)||(4231624-4231726)
chr6 (25-108)||(15832674-15832756)
chr6 (17-110)||(946465-946557)
chr6 (1-78)||(31109351-31109427)
chr6 (4-107)||(15989964-15990066)
chr6 (4-107)||(30341282-30341384)
chr6 (4-107)||(15507946-15508048)
chr6 (4-95)||(30870090-30870180)
chr6 (65-107)||(22422001-22422043)
[»] chr7 (35 HSPs)
chr7 (1-111)||(19329915-19330024)
chr7 (1-111)||(4999432-4999541)
chr7 (1-111)||(8080301-8080410)
chr7 (1-111)||(32951411-32951520)
chr7 (1-111)||(38837290-38837399)
chr7 (1-111)||(35137606-35137715)
chr7 (1-111)||(40957780-40957889)
chr7 (1-102)||(19436114-19436214)
chr7 (4-107)||(35522952-35523054)
chr7 (1-111)||(38267113-38267222)
chr7 (1-111)||(7389462-7389570)
chr7 (1-111)||(11044251-11044360)
chr7 (4-89)||(31735953-31736037)
chr7 (10-107)||(46033723-46033819)
chr7 (1-89)||(3784068-3784155)
chr7 (3-81)||(3694442-3694519)
chr7 (7-107)||(21234480-21234579)
chr7 (1-111)||(3434635-3434734)
chr7 (4-95)||(26296720-26296810)
chr7 (13-107)||(16374746-16374839)
chr7 (25-107)||(41423779-41423860)
chr7 (4-81)||(8238289-8238365)
chr7 (3-107)||(35468777-35468880)
chr7 (39-111)||(36362125-36362196)
chr7 (4-107)||(22343437-22343539)
chr7 (4-107)||(38044273-38044375)
chr7 (4-107)||(41915817-41915919)
chr7 (66-111)||(36361843-36361888)
chr7 (1-89)||(18207252-18207339)
chr7 (1-61)||(36208246-36208306)
chr7 (48-107)||(46374746-46374804)
chr7 (1-95)||(27744243-27744336)
chr7 (4-81)||(32564374-32564450)
chr7 (4-107)||(7727982-7728084)
chr7 (1-37)||(36361904-36361940)
[»] chr4 (26 HSPs)
chr4 (1-111)||(6034117-6034226)
chr4 (1-111)||(41236420-41236529)
chr4 (1-111)||(48182967-48183076)
chr4 (1-111)||(42044285-42044394)
chr4 (1-111)||(24995025-24995134)
chr4 (4-107)||(41823958-41824060)
chr4 (1-109)||(54473453-54473560)
chr4 (1-111)||(11511381-11511489)
chr4 (4-107)||(31910268-31910370)
chr4 (1-107)||(29239959-29240064)
chr4 (1-81)||(480395-480474)
chr4 (1-111)||(29234173-29234272)
chr4 (4-95)||(40574855-40574945)
chr4 (1-107)||(50052350-50052455)
chr4 (3-111)||(53352492-53352591)
chr4 (13-111)||(23608320-23608417)
chr4 (4-107)||(19670638-19670740)
chr4 (1-107)||(50526093-50526198)
chr4 (4-81)||(17983691-17983767)
chr4 (1-60)||(48647694-48647753)
chr4 (4-107)||(55475267-55475369)
chr4 (4-81)||(47986284-47986360)
chr4 (7-107)||(50813814-50813913)
chr4 (4-107)||(29547881-29547983)
chr4 (10-107)||(18924417-18924513)
chr4 (12-89)||(56300105-56300181)
[»] chr2 (34 HSPs)
chr2 (1-111)||(10249300-10249409)
chr2 (1-111)||(13438416-13438525)
chr2 (1-121)||(28863528-28863647)
chr2 (1-111)||(17473093-17473202)
chr2 (1-111)||(32505566-32505675)
chr2 (3-111)||(19930738-19930845)
chr2 (3-112)||(9058555-9058663)
chr2 (1-109)||(33436020-33436127)
chr2 (1-111)||(7465653-7465762)
chr2 (1-111)||(40701551-40701660)
chr2 (1-107)||(20700888-20700993)
chr2 (4-111)||(28381573-28381679)
chr2 (1-112)||(30915536-30915646)
chr2 (4-107)||(36168912-36169014)
chr2 (8-111)||(38882729-38882831)
chr2 (1-111)||(4060758-4060867)
chr2 (4-107)||(40613824-40613926)
chr2 (4-102)||(38273070-38273166)
chr2 (6-99)||(2533201-2533293)
chr2 (4-102)||(42257269-42257366)
chr2 (13-107)||(44152012-44152105)
chr2 (39-111)||(5574418-5574489)
chr2 (4-107)||(13365429-13365531)
chr2 (25-107)||(41758684-41758765)
chr2 (4-81)||(2997435-2997511)
chr2 (48-111)||(27864811-27864873)
chr2 (4-107)||(43490197-43490299)
chr2 (1-107)||(3440052-3440157)
chr2 (1-61)||(17819971-17820031)
chr2 (4-107)||(17823864-17823966)
chr2 (4-107)||(38732430-38732532)
chr2 (149-195)||(44728659-44728705)
chr2 (4-81)||(45097683-45097759)
chr2 (13-61)||(41575223-41575271)
[»] chr5 (25 HSPs)
chr5 (1-111)||(33149556-33149665)
chr5 (1-111)||(18520802-18520911)
chr5 (1-111)||(40145480-40145589)
chr5 (1-111)||(2740347-2740456)
chr5 (1-113)||(14831887-14831998)
chr5 (1-112)||(13811725-13811834)
chr5 (1-111)||(35785272-35785381)
chr5 (1-95)||(36732876-36732969)
chr5 (4-107)||(15409532-15409634)
chr5 (4-107)||(6679774-6679876)
chr5 (4-91)||(26720592-26720678)
chr5 (4-91)||(26990341-26990427)
chr5 (1-107)||(31009061-31009166)
chr5 (1-107)||(36875538-36875639)
chr5 (13-95)||(33825258-33825339)
chr5 (1-107)||(35943814-35943919)
chr5 (1-89)||(2177437-2177524)
chr5 (4-64)||(28177851-28177911)
chr5 (4-107)||(2252090-2252192)
chr5 (4-107)||(3921187-3921289)
chr5 (42-111)||(31132448-31132516)
chr5 (1-89)||(20073456-20073543)
chr5 (3-55)||(42414275-42414327)
chr5 (65-111)||(16115250-16115296)
chr5 (4-89)||(39557457-39557541)
[»] chr3 (35 HSPs)
chr3 (1-111)||(33644273-33644382)
chr3 (1-111)||(53982084-53982193)
chr3 (3-111)||(31456764-31456871)
chr3 (4-107)||(20764837-20764939)
chr3 (1-107)||(8076466-8076571)
chr3 (1-111)||(17470478-17470587)
chr3 (1-111)||(54868813-54868922)
chr3 (1-118)||(49607487-49607603)
chr3 (1-111)||(52629373-52629482)
chr3 (6-107)||(51419282-51419382)
chr3 (4-107)||(11347844-11347946)
chr3 (18-110)||(36707347-36707438)
chr3 (4-107)||(30801655-30801757)
chr3 (4-107)||(41189686-41189788)
chr3 (1-109)||(9563072-9563179)
chr3 (7-107)||(47531944-47532043)
chr3 (4-107)||(26141452-26141556)
chr3 (13-107)||(35536711-35536804)
chr3 (1-107)||(35965704-35965809)
chr3 (39-111)||(11095285-11095356)
chr3 (4-107)||(36331251-36331353)
chr3 (3-107)||(14623761-14623864)
chr3 (39-110)||(27714822-27714892)
chr3 (42-111)||(48587019-48587087)
chr3 (4-107)||(45058475-45058577)
chr3 (1-82)||(1758404-1758483)
chr3 (13-107)||(8956847-8956940)
chr3 (4-54)||(26754771-26754821)
chr3 (4-54)||(48375680-48375730)
chr3 (4-45)||(11907447-11907488)
chr3 (3-95)||(13897989-13898080)
chr3 (1-95)||(33118784-33118878)
chr3 (25-107)||(43746436-43746517)
chr3 (1-54)||(24699928-24699981)
chr3 (3-79)||(39670086-39670161)
[»] scaffold0237 (1 HSPs)
scaffold0237 (1-111)||(4102-4211)
[»] scaffold0321 (1 HSPs)
scaffold0321 (1-111)||(10027-10136)
[»] scaffold1268 (1 HSPs)
scaffold1268 (9-107)||(851-948)
[»] scaffold1267 (1 HSPs)
scaffold1267 (9-107)||(851-948)
[»] scaffold0110 (1 HSPs)
scaffold0110 (1-107)||(8785-8890)


Alignment Details
Target: chr1 (Bit Score: 121; Significance: 4e-62; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 112 - 240
Target Start/End: Original strand, 5979710 - 5979838
Alignment:
Q  112 gtcaaaatataccataggagcggcaaaactctaccttaagagatagatagagagaaaatatggtgtagaatgagtgtatgaaaatcaagagtgtacaaat 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5979710 gtcaaaatataccataggagcggcaaaactctaccttaagagatagatagagagaaaatatggtgtagaatgagtgtatgaaaatcaagggtgtacaaat 5979809  T
Q  212 atgttgggatgtgatgtgttgatgatgtc 240  Q
    ||||| |||||||||||||||||||||||    
T  5979810 atgttaggatgtgatgtgttgatgatgtc 5979838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 27564762 - 27564653
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||| ||||| ||||    
T  27564762 acgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaagggtgtatgggaataaagggtgtctatg 27564664  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  27564663 tatcattactc 27564653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 41758881 - 41758987
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    |||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||    
T  41758881 tggaccccgcacaaacacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaagggtgtatgagaataaagggtgtctatgtat 41758979  T
Q  104 cattactc 111  Q
    ||||||||    
T  41758980 cattactc 41758987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 50630531 - 50630636
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||| ||||    
T  50630531 acgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-agggtgtacaagggtgtatgagaataaatggtgtctatg 50630629  T
Q  101 tatcatt 107  Q
     ||||||    
T  50630630 catcatt 50630636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 9474903 - 9474794
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||  |||| ||||    
T  9474903 acgtggaccccgcacaaacacactttctcttttctctcctcttctctcttcctaatgcat-gggatgtacaagggtgtatgagaataaagagtgtctatg 9474805  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  9474804 tatcattactc 9474794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 48716309 - 48716200
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| || |||||||| |||||||||| ||||||||||||| |||||||||||||||||||| ||||||| ||||| ||||    
T  48716309 acgtggaccccgcacaagcacactttatcttttctttcctcttctctcttcctaatgcat-ggggtgtacaagggtgtatgggaataaagggtgtctatg 48716211  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  48716210 tatcattactc 48716200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 32813323 - 32813425
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||||||| || |||||||||||||||||||| ||||||||||||| ||||||     
T  32813323 tggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgtat-ggggtgtacaagggtgtatgggaataaatggtgtctatgtaa 32813421  T
Q  104 catt 107  Q
    ||||    
T  32813422 catt 32813425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 2581988 - 2582097
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||| ||| | ||||||||||||||||| |||||||| ||||| ||||    
T  2581988 acgtggaccccgcacaagcacactttcttttttctctcctcttctctcttcctaatacat-gaggtgtacaagggtgtattagaataaagggtgtttatg 2582086  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  2582087 tatcattactc 2582097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 37649280 - 37649379
Alignment:
Q  10 ccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcattac 109  Q
    |||||||||||||| ||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||| ||||| |||||||||||||    
T  37649280 ccgcacaagcacactttcccttttctctcctcttctctcttcctaatgcat-ggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattac 37649378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 38632348 - 38632255
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgt 95  Q
    ||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||| |||||    
T  38632348 acgtggaccccgcacaagcacactttttcttttctctcctcttctctcttcctaatgcat-ggggtgtacaagggtgtatgggaataaagggtgt 38632255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 47452347 - 47452238
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||| ||||||| ||||| ||||||||||||| |||||| |||||||  |||| ||||    
T  47452347 acgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcctattgcat-ggggtgtacaaggatgtatgggaataaagagtgtctatg 47452249  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  47452248 tatcattactc 47452238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 8346415 - 8346305
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcc-cttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatat 99  Q
    |||||||||| |||||||||||| ||||||||||||||||||| | | ||||||||||||||| | ||||||| |||||||||||||||||||| | |||    
T  8346415 acgtggaccctgcacaagcacactttctcttttctctcctctttttctcttcctaatgcatggag-tgtacaaaggtgtatgagaataaatggtatttat 8346317  T
Q  100 gtatcattactc 111  Q
    ||||||||||||    
T  8346316 gtatcattactc 8346305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 43205 - 43314
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    |||||||| |||||||||||||| ||||||||||||||||| |||| ||| ||||||||| |||||||||||| |||||| |||||||| ||| | ||||    
T  43205 acgtggactccgcacaagcacactttctcttttctctcctcctctctctttctaatgcat-ggggtgtacaagagtgtataagaataaagggtatctatg 43303  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  43304 tatcattactc 43314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 49811545 - 49811449
Alignment:
Q  10 ccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcatt 107  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||| || | |||| ||||||||||||||||||||| ||||| |||||| ||||    
T  49811545 ccgcacaagcacactttctcttttctctcctcttctctcttcctaatgtat-gtggtgcacaagggtgtatgagaataaagggtgtctatgtaacatt 49811449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 3000392 - 3000502
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    |||||||||||| |||||||||| |||||||||||||| ||||||| |||||||||  || ||||||||||||||||||||  |||||  | ||| ||||    
T  3000392 acgtggaccccgtacaagcacactttctcttttctctcatcttctctcttcctaatatat-ggggtgtacaagggtgtatggaaataatggatgtctatg 3000490  T
Q  101 tatcattactcg 112  Q
    ||||||||||||    
T  3000491 tatcattactcg 3000502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 45044584 - 45044498
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatg 91  Q
    |||||||||||||| ||||  ||||||||||||| |||||||| |||||||||| || ||||||||||||||||||||||||||||||    
T  45044584 tggaccccgcacaaacacattttctcttttctcttctcttctctcttcctaatgtat-ggggtgtacaagggtgtatgagaataaatg 45044498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 38595227 - 38595336
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    |||||||||||| |||||||||| |||||||||||||| ||||||| |||||||||  || ||||||||||||||||||||  |||||  | ||| ||||    
T  38595227 acgtggaccccgtacaagcacactttctcttttctctcatcttctctcttcctaatatat-ggggtgtacaagggtgtatggaaataatggatgtctatg 38595325  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  38595326 tatcattactc 38595336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 51898710 - 51898605
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||| ||||||||||||||| |||| ||| ||||||||||||| ||||||| ||||| |||||||||||||||||||   |||||| ||||| ||||    
T  51898710 acgtggatcccgcacaagcacactttctatttcctctcctcttctctcttcctagtgcat-ggggtgtacaagggtgtatagaaataaagggtgtttatg 51898612  T
Q  101 tatcatt 107  Q
    || ||||    
T  51898611 taacatt 51898605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 44548403 - 44548343
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatg 61  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||    
T  44548403 acgtggaccccgcacaagcacactttctcttttctctcttcttctctcttcctaatgcatg 44548343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 37926462 - 37926372
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgt 95  Q
    |||| |||| ||||| |||| ||||||||||||| |||||||| |||||||||| || ||||||||||||| |||||| |||||||||||||    
T  37926462 tggatcccgtacaagtacactttctcttttctcttctcttctctcttcctaatgtat-ggggtgtacaaggatgtatgtgaataaatggtgt 37926372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 44454052 - 44454161
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggg---gtgtacaagggtgtatgagaataaatggtgtat 97  Q
    ||||||| ||| ||||||||||| || ||||| ||||| ||||||| |||||||||||||||||   | ||| |||||||||| |||||||||||||| |    
T  44454052 acgtggatcccacacaagcacactttttctttcctctcatcttctctcttcctaatgcatggggtcagagtataagggtgtataagaataaatggtgttt 44454151  T
Q  98 atgtatcatt 107  Q
    ||||| ||||    
T  44454152 atgtaacatt 44454161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 11152400 - 11152312
Alignment:
Q  6 gaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgt 95  Q
    |||||||||||||||| | |||| ||| ||||||||||||| ||||| | ||||| |||||||| |||| ||||||||||||||||||||    
T  11152400 gaccccgcacaagcacgctttctttttcctctcctcttctctcttcccagtgcat-ggggtgtagaaggatgtatgagaataaatggtgt 11152312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 5959024 - 5958948
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatg 81  Q
    ||||||||||||||| |||| ||||||||  ||| |||||||| ||||||||| ||| ||||||||||||||||||||    
T  5959024 tggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacat-ggggtgtacaagggtgtatg 5958948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 50591024 - 50590948
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatg 81  Q
    ||||||||||||||| |||| ||||||||  ||| |||||||| ||||||||| ||| ||||||||||||||||||||    
T  50591024 tggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacat-ggggtgtacaagggtgtatg 50590948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 26274505 - 26274611
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||| || ||||||| |||| || |||||||||||   ||||| |||||||||||||| |  || ||||||||||||| ||||||| ||||| ||||    
T  26274505 acgtggatcctgcacaagtacactttttcttttctctc---ttctctcttcctaatgcatgaga-tgcacaagggtgtatgggaataaagggtgtctatg 26274600  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  26274601 tatcattactc 26274611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13414834 - 13414895
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgg 62  Q
    ||||||||||| ||||||||||  ||||||||||| || ||||||| |||||||||||||||    
T  13414834 acgtggaccccacacaagcacattttctcttttctatcatcttctctcttcctaatgcatgg 13414895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 41608517 - 41608415
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    ||||||||| ||||| |||| ||||||||  ||| |||||||| ||||||||| ||| ||| ||||||||||||||||  | |||| ||||| ||||||     
T  41608517 tggaccccgtacaagtacactttctctttcttcttctcttctctcttcctaatacataggg-tgtacaagggtgtatgcaattaaaaggtgtttatgtaa 41608419  T
Q  104 catt 107  Q
    ||||    
T  41608418 catt 41608415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 6260943 - 6261048
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    |||||||||||||| |||||||  |||| |||  |||||||||||| ||| ||| |  ||  |||||||||| ||||||||| |||||||||||| ||||    
T  6260943 acgtggaccccgcataagcacattttctatttcttctcctcttctctctttctagtatat-agggtgtacaaaggtgtatgaaaataaatggtgtgtatg 6261041  T
Q  101 tatcatt 107  Q
    || ||||    
T  6261042 taacatt 6261048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 47748518 - 47748620
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    |||| |||||||||| | || ||||||||  ||| |||||||| ||||||||| ||||||| |||||||| |||||||  | |||| ||||| ||||||     
T  47748518 tggatcccgcacaagtatactttctctttcttcttctcttctctcttcctaatacatgggg-tgtacaagagtgtatgcaattaaaaggtgtctatgtaa 47748616  T
Q  104 catt 107  Q
    ||||    
T  47748617 catt 47748620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 44332395 - 44332319
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatg 81  Q
    ||||||||||||||| | || ||||||||  ||| |||||||| ||||||||| |||  | |||||||||||||||||    
T  44332395 tggaccccgcacaagtatactttctctttcttcttctcttctctcttcctaatacat-agagtgtacaagggtgtatg 44332319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 48489373 - 48489426
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttccta 54  Q
    ||||||| ||||||||||||||  |||| ||||||| ||||||||| |||||||    
T  48489373 acgtggatcccgcacaagcacattttctattttctcacctcttctctcttccta 48489426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 3e-44; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 12831120 - 12831229
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  12831120 acgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaagggtgtatgagaataaatggtgtctatg 12831218  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  12831219 tatcattactc 12831229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 504148 - 504039
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  504148 acgtggaccccgcacaagcacacattctcttttctctcatcttctctcttcctaatgcat-ggggtgtacaagggtgtatgagaataaagggtgtctatg 504050  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  504049 tatcattactc 504039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 23122624 - 23122514
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    |||||||||||||| |||||||| |||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  23122624 acgtggaccccgcataagcacactttctcttttctctcctgttctctcttcctaatgcat-ggggtgtacaagggtgtatgagaataaagggtgtctatg 23122526  T
Q  101 tatcattactcg 112  Q
    ||||||||||||    
T  23122525 tatcattactcg 23122514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 14547995 - 14548104
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||| ||||| ||||    
T  14547995 acgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaaggatgtatgggaataaagggtgtctatg 14548093  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  14548094 tatcattactc 14548104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 34012323 - 34012214
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||| ||||| ||||    
T  34012323 acgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaagggtgtacgagaataaagggtgtctatg 34012225  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  34012224 tatcattactc 34012214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 15197406 - 15197517
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||| || ||||| ||||||| | |||||||||||||||||| |||||||  |||| ||||    
T  15197406 acgtggaccccgcacaagcacactttctcttttctctcctcttttctcttccaaatgcat-gaggtgtacaagggtgtatgggaataaaaagtgtctatg 15197504  T
Q  101 tatcattactcgt 113  Q
    |||||||||||||    
T  15197505 tatcattactcgt 15197517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 40423968 - 40423865
Alignment:
Q  3 gtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgta 102  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||| | |||||||||||||||||| ||||||| ||||| ||||||    
T  40423968 gtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatacat-gaggtgtacaagggtgtatgggaataaaaggtgtctatgta 40423870  T
Q  103 tcatt 107  Q
    |||||    
T  40423869 tcatt 40423865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 8841459 - 8841354
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||  |||||| ||||| |||||||||||| ||||||||||||||||||||| ||||    
T  8841459 acgtggaccccgcacaagcacactttctctttcctctcctcttctcttttcctagtgcat-ggggtgtacaagagtgtatgagaataaatggtgtctatg 8841361  T
Q  101 tatcatt 107  Q
    || ||||    
T  8841360 taacatt 8841354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 9122258 - 9122367
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||| |||||||   ||| ||||    
T  9122258 acgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaagagtgtatgggaataaagaatgtctatg 9122356  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  9122357 tatcattactc 9122367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 44507114 - 44507006
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    |||||||||||| ||||||| || |||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||  ||| ||||    
T  44507114 acgtggaccccgtacaagcatactttctcttttctctcatcttctctcttcctaatgcat-ggggtgtacaagggtgtatgagaataaat-atgtctatg 44507017  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  44507016 tatcattactc 44507006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 43414605 - 43414503
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    |||| ||||||||||||||| |||||||||||||||||||||| |||||||||| || ||||||||||||||||||||  |||||| ||||| ||||||     
T  43414605 tggatcccgcacaagcacactttctcttttctctcctcttctctcttcctaatgtat-ggggtgtacaagggtgtatggcaataaagggtgtctatgtaa 43414507  T
Q  104 catt 107  Q
    ||||    
T  43414506 catt 43414503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 5957903 - 5958008
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||| ||||||||| ||||| |||||||| ||||||||||||| ||||||| ||||| | |||||||||||||||||||||||||| ||||| ||||    
T  5957903 acgtggatcccgcacaatcacactttctctttcctctcctcttctctcttcctagtgcat-gaggtgtacaagggtgtatgagaataaagggtgtttatg 5958001  T
Q  101 tatcatt 107  Q
    || ||||    
T  5958002 taacatt 5958008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 1179958 - 1179858
Alignment:
Q  10 ccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcattac 109  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| | |||| ||||||| | ||| ||| |||||||||    
T  1179958 ccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaaggatatatgggaataaaggatgtctatctatcattac 1179860  T
Q  110 tc 111  Q
    ||    
T  1179859 tc 1179858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 10284658 - 10284553
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| |||||||| || || ||||||| ||||||| ||||| ||||||||||||| ||||| |||||||| ||||| ||||    
T  10284658 acgtggaccccgcacaagcacactttctctttcctttcatcttctctcttcctagtgcat-ggggtgtacaaggttgtataagaataaaaggtgtctatg 10284560  T
Q  101 tatcatt 107  Q
    || ||||    
T  10284559 taacatt 10284553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 111
Target Start/End: Complemental strand, 42710297 - 42710212
Alignment:
Q  25 ttctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcattactc 111  Q
    |||||||||||||||||||||| |||||||||| |||||| |||||||||||||||| ||||||| ||||| | |||||||||||||    
T  42710297 ttctcttttctctcctcttctctcttcctaatgtatgggg-tgtacaagggtgtatgggaataaagggtgtctgtgtatcattactc 42710212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 4854887 - 4854785
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    ||||||| |||||||||||| |||||||||||||||||||||| ||| |||||| || ||| ||||||||||| ||||||||||||  |||| ||||||     
T  4854887 tggaccctgcacaagcacactttctcttttctctcctcttctctcttactaatgtat-gggatgtacaagggtatatgagaataaagagtgtctatgtaa 4854789  T
Q  104 catt 107  Q
    ||||    
T  4854788 catt 4854785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 37038552 - 37038657
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||| ||||||||||||||| |||| ||| ||||||||||||| ||||||| ||||| |||||||||||||||||||   |||||| ||||| ||||    
T  37038552 acgtggatcccgcacaagcacactttctatttcctctcctcttctctcttcctagtgcat-ggggtgtacaagggtgtatagaaataaagggtgtttatg 37038650  T
Q  101 tatcatt 107  Q
    || ||||    
T  37038651 taacatt 37038657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 42354600 - 42354510
Alignment:
Q  16 aagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcatt 107  Q
    |||||||| ||||||||  ||| |||||||| ||||||| ||||||||| |||| ||||||||||||||||||||||||| |||||| ||||    
T  42354600 aagcacactttctctttcatcttctcttctctcttcctagtgcatgggg-tgtagaagggtgtatgagaataaatggtgtctatgtaacatt 42354510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 15048206 - 15048115
Alignment:
Q  4 tggaccccgcacaagcacacattctc-ttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgt 95  Q
    |||||||||||||||||||| ||||| |||| |||||||||||| |||||||||| || ||| |||||||||||||||  ||||||| |||||    
T  15048206 tggaccccgcacaagcacactttctctttttatctcctcttctctcttcctaatgtat-gggatgtacaagggtgtatcggaataaagggtgt 15048115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 24307817 - 24307714
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    ||||||||||||||| |||| ||||||||  ||| |||||||| ||||||||| ||| ||||||||||||||||||||  | |||| ||||| ||||||     
T  24307817 tggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacat-ggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaa 24307719  T
Q  104 catta 108  Q
    |||||    
T  24307718 catta 24307714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 16056425 - 16056323
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    ||||||||||||||| |||| ||||||||  ||| |||||||| ||||||||| ||| ||||||||||||||||||||  | |||| ||||| ||||||     
T  16056425 tggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacat-ggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaa 16056327  T
Q  104 catt 107  Q
    ||||    
T  16056326 catt 16056323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 10621106 - 10621059
Alignment:
Q  9 cccgcacaagcacacattctcttttctctcctcttctcccttcctaat 56  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||    
T  10621106 cccgcacaagcacactttctcttttctctcctcttctctcttcctaat 10621059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 32708029 - 32707925
Alignment:
Q  4 tggaccccgcacaagcacaca--ttctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgt 101  Q
    ||||||||||||||| |||||  ||||||||  ||| |||||||| ||||||||| ||||||| ||||||||||||||||  | |||| ||||| |||||    
T  32708029 tggaccccgcacaagtacacactttctctttcttcttctcttctctcttcctaatacatgggg-tgtacaagggtgtatgcaattaaaaggtgtctatgt 32707931  T
Q  102 atcatt 107  Q
    | ||||    
T  32707930 aacatt 32707925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 30479498 - 30479395
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    |||||| |||||||| |||| ||||||||  ||| |||||||| ||||||||| |||| || ||||||||||||||||  | |||| ||||| ||||||     
T  30479498 tggacctcgcacaagtacactttctctttcttcttctcttctctcttcctaatacatgagg-tgtacaagggtgtatgcaattaaaaggtgtctatgtaa 30479400  T
Q  104 catta 108  Q
    |||||    
T  30479399 catta 30479395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 34307295 - 34307394
Alignment:
Q  7 accccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcat 106  Q
    |||||||||||| |||| ||||||||  ||| |||||||| |||||||||  || ||||||||||||||||||||  | |||| ||||| |||||| |||    
T  34307295 accccgcacaagtacactttctctttcttcttctcttctctcttcctaatatat-ggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacat 34307393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15258956 - 15258903
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttccta 54  Q
    |||||||||| |||||||||||  |||||||| ||||||||||||| |||||||    
T  15258956 acgtggaccctgcacaagcacattttctctttcctctcctcttctctcttccta 15258903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 16383453 - 16383521
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaag 73  Q
    ||||||||||||||| |||| ||||||||  ||| |||||||| ||||||||| ||| ||||||||||||    
T  16383453 tggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacat-ggggtgtacaag 16383521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 20074969 - 20074916
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttccta 54  Q
    |||||||||| |||||||||||| |||||||| |||| |||||||| |||||||    
T  20074969 acgtggaccctgcacaagcacactttctctttcctcttctcttctctcttccta 20074916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 25838265 - 25838341
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatg 81  Q
    ||||| ||| |||||||||| || |||||||||||||||||||  || |||||| ||  |||||||||||| ||||||    
T  25838265 tggactccgtacaagcacactttttcttttctctcctcttctcttttgctaatgtat-agggtgtacaaggttgtatg 25838341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 40467773 - 40467826
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttccta 54  Q
    ||||||||  ||||||||||||| |||||||| ||||| ||||||| |||||||    
T  40467773 acgtggacttcgcacaagcacactttctctttcctctcatcttctctcttccta 40467826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 8e-42; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 22880685 - 22880576
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||||||||||||    
T  22880685 acgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatacat-ggggtgtacaagggtgtatgggaataaatggtgtatatg 22880587  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  22880586 tatcattactc 22880576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 11427691 - 11427800
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  11427691 acgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaagggtgtatgagaataaagggtgtctatg 11427789  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  11427790 tatcattactc 11427800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 17598627 - 17598736
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||  |||||| ||||| ||||    
T  17598627 acgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaagggtgtatggaaataaaaggtgtctatg 17598725  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  17598726 tatcattactc 17598736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 32869751 - 32869860
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||| ||||| ||||    
T  32869751 acgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaaggatgtatgggaataaagggtgtctatg 32869849  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  32869850 tatcattactc 32869860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 29857900 - 29858009
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||| |||||| |||||||| ||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||| ||||    
T  29857900 acgtggatcccgcataagcacactttctcttttctcttctcttctctcttcctaatgcat-ggggtgtacaagggtgtatgggaataaatggtgtctatg 29857998  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  29857999 tatcattactc 29858009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 31976327 - 31976426
Alignment:
Q  7 accccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcat 106  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||| |||||| |||    
T  31976327 accccgcacaagcacactttctcttttctctcctcttctctcttcctaatgtat-ggggtgtacaagggtgtatgagaataaatggtgtctatgtaacat 31976425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 6209492 - 6209384
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||| ||| ||||||| | |||| | ||||||| ||| | ||||    
T  6209492 acgtggaccccgcactagcacactttctcttttctctcctcttctctcttcctaatgcat-gggatgtacaaagatgta-gggaataaagggtatctatg 6209395  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  6209394 tatcattactc 6209384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 23128154 - 23128044
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatgg-tgtatat 99  Q
    ||||||| ||| ||||||||||| ||||||||||||||||||| || ||||||||||||| ||| ||||||||||||||||  |||||| || | | |||    
T  23128154 acgtggatcccacacaagcacactttctcttttctctcctcttttctcttcctaatgcat-gggatgtacaagggtgtatggaaataaaaggttctctat 23128056  T
Q  100 gtatcattactc 111  Q
    ||||||||||||    
T  23128055 gtatcattactc 23128044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 28536513 - 28536426
Alignment:
Q  3 gtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatg 91  Q
    ||||||||| ||||||||||| ||||||||| ||| |||||| | ||||||| ||||| ||||||||||||||||||||| ||||||||    
T  28536513 gtggaccccacacaagcacactttctcttttatcttctcttccctcttcctactgcat-ggggtgtacaagggtgtatgaaaataaatg 28536426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 31110785 - 31110683
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    ||||||| |||||||||||| ||||||||||||| |||||||| |||||||||| || ||||||||||| ||||||||  |||||| | ||| ||||||     
T  31110785 tggaccctgcacaagcacactttctcttttctctactcttctctcttcctaatgtat-ggggtgtacaaaggtgtatggaaataaaggatgtctatgtaa 31110687  T
Q  104 catt 107  Q
    ||||    
T  31110686 catt 31110683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 31953055 - 31952952
Alignment:
Q  3 gtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgta 102  Q
    ||||||| | ||||| ||||| ||||||||  ||| |||||||| ||||||| ||||||||| |||| |||| |||||||||||||||||||| ||||||    
T  31953055 gtggacctcacacaaacacactttctctttcatcttctcttctctcttcctagtgcatgggg-tgtagaaggatgtatgagaataaatggtgtctatgta 31952957  T
Q  103 tcatt 107  Q
     ||||    
T  31952956 acatt 31952952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 4231624 - 4231726
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    ||||||||||||||| |||| ||||||||  ||| |||||||| ||||||||| ||| ||||||||||||||||||||  | |||| ||||| ||||||     
T  4231624 tggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacat-ggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaa 4231722  T
Q  104 catt 107  Q
    ||||    
T  4231723 catt 4231726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 15832674 - 15832756
Alignment:
Q  25 ttctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcatta 108  Q
    ||||||||| |||||||||||  ||||||||||||| |||||||||||||||||||  ||||||| ||||| || |||||||||    
T  15832674 ttctcttttttctcctcttctatcttcctaatgcat-ggggtgtacaagggtgtattggaataaagggtgtctacgtatcatta 15832756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 946465 - 946557
Alignment:
Q  17 agcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcattact 110  Q
    ||||||| |||||||||||||||||||||| ||||||||||||| | | ||||||||  ||||||| ||||||  ||||  |||||||||||||    
T  946465 agcacactttctcttttctctcctcttctctcttcctaatgcat-gagatgtacaagaatgtatgacaataaaaagtgtcaatgtatcattact 946557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 31109427 - 31109351
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgt 78  Q
    |||| ||||||||| ||| |||| ||||||||||||||||||| || ||||||||||||| ||||| |||||||||||    
T  31109427 acgtagaccccgcaaaagtacactttctcttttctctcctcttttctcttcctaatgcat-ggggtatacaagggtgt 31109351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 15990066 - 15989964
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    ||||||||||||||| |||| ||||||||  ||| |||||||| |||||||||  || ||||||||||||||||||||  | |||| ||||| ||||||     
T  15990066 tggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatatat-ggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaa 15989968  T
Q  104 catt 107  Q
    ||||    
T  15989967 catt 15989964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 30341384 - 30341282
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    ||||||||||||||| |||| ||||||||  ||| |||||||| |||||||||  || ||||||||||||||||||||  | |||| ||||| ||||||     
T  30341384 tggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatatat-ggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaa 30341286  T
Q  104 catt 107  Q
    ||||    
T  30341285 catt 30341282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 15508048 - 15507946
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    ||||||||||||||| |||| ||||||||  ||| |||||||| |||||||||  || ||||||||||||| ||||||  | |||| ||||| ||||||     
T  15508048 tggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatatat-ggggtgtacaaggatgtatgcaattaaaaggtgtctatgtaa 15507950  T
Q  104 catt 107  Q
    ||||    
T  15507949 catt 15507946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 30870090 - 30870180
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgt 95  Q
    |||||||||||||||||||  |||||||| ||||||||||||| ||| ||| |  ||  |||||||||| ||||||||| |||||| |||||    
T  30870090 tggaccccgcacaagcacattttctctttcctctcctcttctctctttctagtatat-agggtgtacaaaggtgtatgaaaataaagggtgt 30870180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 107
Target Start/End: Complemental strand, 22422043 - 22422001
Alignment:
Q  65 gtgtacaagggtgtatgagaataaatggtgtatatgtatcatt 107  Q
    ||||||||||||||||||||||||||||||| |||||| ||||    
T  22422043 gtgtacaagggtgtatgagaataaatggtgtctatgtaacatt 22422001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 19329915 - 19330024
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||| ||||| ||||    
T  19329915 acgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaagggtgtatgggaataaagggtgtctatg 19330013  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  19330014 tatcattactc 19330024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 4999541 - 4999432
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  4999541 acgtggaccccgcacaaacacactttctcttttatctcctcttctctcttcctaatgcat-ggggtgtacaagggtgtatgagaataaaaggtgtctatg 4999443  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  4999442 tatcattactc 4999432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 8080410 - 8080301
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| ||||||| ||||| ||||    
T  8080410 acgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctattgcat-ggggtgtacaagggtgtatgggaataaagggtgtctatg 8080312  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  8080311 tatcattactc 8080301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 32951520 - 32951411
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||  ||||| ||||    
T  32951520 acgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatacat-ggggtgtacaagggtgtatgagaataaggggtgtctatg 32951422  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  32951421 tatcattactc 32951411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 38837290 - 38837399
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||  |||||| ||||| ||||    
T  38837290 acgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-gggatgtacaagggtgtatggaaataaagggtgtctatg 38837388  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  38837389 tatcattactc 38837399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 35137606 - 35137715
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||| ||||||| | ||||    
T  35137606 acgtggaccccgcacaaacacactttctcttttctctcctcttctctcttcctaatgcat-gggatgtacaagggtgtatgagaacaaatggtatctatg 35137704  T
Q  101 tatcattactc 111  Q
     ||||||||||    
T  35137705 gatcattactc 35137715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 40957780 - 40957889
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||| |||| |||||||||| |||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| |||||  ||||| ||||    
T  40957780 acgtggatcccgtacaagcacactttctcttttctctcatcttctctcttcctaatgcat-ggggtgtacaagggtgtatgaaaataatgggtgtctatg 40957878  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  40957879 tatcattactc 40957889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 19436214 - 19436114
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||| |||||| |||||||| ||||||||||||| ||||| || ||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  19436214 acgtggatcccgcataagcacactttctcttttctcttctcttttctcttcctaatgcat-ggggtgtacaagggtgtatgagaataaatggtgtctatg 19436116  T
Q  101 ta 102  Q
    ||    
T  19436115 ta 19436114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 35522952 - 35523054
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    |||| ||||||||||||||| |||||||||||||| ||||||| |||||||||| || |||||||||||||||||||| ||||||||||||| ||||||     
T  35522952 tggatcccgcacaagcacactttctcttttctctcttcttctctcttcctaatgtat-ggggtgtacaagggtgtatgggaataaatggtgtttatgtaa 35523050  T
Q  104 catt 107  Q
    ||||    
T  35523051 catt 35523054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 38267113 - 38267222
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||| ||||| | ||||||||  |||||||| | | ||||    
T  38267113 acgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-gggatgtacgaaggtgtatggaaataaatgatatctatg 38267211  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  38267212 tatcattactc 38267222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 7389462 - 7389570
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| ||||||||||||||||  |||| ||||||||| ||| ||||||||| |||||||||| ||||||| | ||| ||||    
T  7389462 acgtggaccccgcacaagcacactttctcttttctctcctactctctcttcctaatacat-ggggtgtac-agggtgtatgggaataaaggatgtctatg 7389559  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  7389560 tatcattactc 7389570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 11044251 - 11044360
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    |||||||||||||||||| |||| |||||||| ||||| ||||||| ||||||||||||| | ||||||||| ||||||||| ||||||  |||| ||||    
T  11044251 acgtggaccccgcacaagtacactttctctttcctctcatcttctctcttcctaatgcat-gaggtgtacaaaggtgtatgaaaataaagagtgtctatg 11044349  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  11044350 tatcattactc 11044360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 31735953 - 31736037
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaa 89  Q
    |||| ||||||||||||||| |||||||||||||||||||||| |||||||||| || |||||||||||||||||||| |||||||    
T  31735953 tggatcccgcacaagcacactttctcttttctctcctcttctctcttcctaatgtat-ggggtgtacaagggtgtatgggaataaa 31736037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 46033819 - 46033723
Alignment:
Q  10 ccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcatt 107  Q
    ||||||||||| |  ||||||||||||||||||||||  ||||||||| |||||| |||||||||||||||||||||||||||||| |||||| ||||    
T  46033819 ccgcacaagcatattttctcttttctctcctcttctctattcctaatgtatgggg-tgtacaagggtgtatgagaataaatggtgtctatgtaacatt 46033723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 3784068 - 3784155
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaa 89  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||  |||||| |||||||    
T  3784068 acgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaagaatgtatgtgaataaa 3784155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 3694442 - 3694519
Alignment:
Q  3 gtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatg 81  Q
    ||||| ||||||||||||||| |||||||||||||||||||||| ||||| ||||||| |||||||||||| |||||||    
T  3694442 gtggatcccgcacaagcacactttctcttttctctcctcttctctcttcccaatgcat-ggggtgtacaagagtgtatg 3694519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 21234480 - 21234579
Alignment:
Q  7 accccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcat 106  Q
    ||||||||||||||||  |||||||  ||||||| | ||| |||||||||| |||||| ||||||| |||||||||||||||| ||||| |||||| |||    
T  21234480 accccgcacaagcacattttctcttacctctcctttcctctcttcctaatgtatgggg-tgtacaatggtgtatgagaataaaaggtgtctatgtaacat 21234578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 3434635 - 3434734
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||| ||||||||||||||| ||||||||||||||          |||||||||||||||| ||||||||| |||||| ||||||| ||||| ||||    
T  3434635 acgtggatcccgcacaagcacactttctcttttctctc----------ttcctaatgcatgggg-tgtacaaggctgtatgggaataaagggtgtctatg 3434723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 26296720 - 26296810
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgt 95  Q
    |||||||||||||||| ||  |||||||||||||||||||||| |||| ||||| || | ||||||||||||||||||  |||| |||||||    
T  26296720 tggaccccgcacaagcgcattttctcttttctctcctcttctctcttcttaatgtat-gaggtgtacaagggtgtatggaaatatatggtgt 26296810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 107
Target Start/End: Complemental strand, 16374839 - 16374746
Alignment:
Q  13 cacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcatt 107  Q
    ||||||||||||||||||||  |||| | ||||| |||||||||| |||| | ||||||| |||||||||||||||| ||||| |||||| ||||    
T  16374839 cacaagcacacattctctttcatctctttttctctcttcctaatgtatggag-tgtacaaaggtgtatgagaataaagggtgtctatgtaacatt 16374746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 41423779 - 41423860
Alignment:
Q  25 ttctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcatt 107  Q
    ||||||||  |||||||||||| ||||||| ||||||||| ||||||| |||||||||||||||| ||||| |||||| ||||    
T  41423779 ttctctttcatctcctcttctctcttcctagtgcatgggg-tgtacaaaggtgtatgagaataaagggtgtttatgtaacatt 41423860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 8238289 - 8238365
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatg 81  Q
    ||||||||||||||| |||| ||||||||  ||| |||||||| ||||||||| ||| ||||||||||||||||||||    
T  8238289 tggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacat-ggggtgtacaagggtgtatg 8238365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 35468880 - 35468777
Alignment:
Q  3 gtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgta 102  Q
    |||||||| |||||| ||||| |||||||| || |||||||||| ||||||| | |||| |  |||| |||| |||||||||||||| ||||||||||||    
T  35468880 gtggaccctgcacaaacacactttctctttcctatcctcttctctcttcctagttcatgaga-tgtataaggatgtatgagaataaaaggtgtatatgta 35468782  T
Q  103 tcatt 107  Q
     ||||    
T  35468781 acatt 35468777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 36362125 - 36362196
Alignment:
Q  39 ctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcattactc 111  Q
    ||||| || ||||||||| ||||||  |||||||||||||||||||||||| ||||| |||||||||||||||    
T  36362125 ctcttttctcttcctaatacatggga-tgtacaagggtgtatgagaataaagggtgtctatgtatcattactc 36362196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 22343437 - 22343539
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    ||||||||||||||| |||| ||||||||  ||| |||||||| ||||||||| ||| | ||||||||||||||||||  | |||| ||||| ||||||     
T  22343437 tggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacat-gaggtgtacaagggtgtatgcaattaaaaggtgtctatgtaa 22343535  T
Q  104 catt 107  Q
    ||||    
T  22343536 catt 22343539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 38044273 - 38044375
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    ||||||||||||||| |||| ||||||||  ||| ||||| || ||||||||| ||| ||||||||||||||||||||  | |||| ||||| ||||||     
T  38044273 tggaccccgcacaagtacactttctctttcttcttctcttttctcttcctaatacat-ggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaa 38044371  T
Q  104 catt 107  Q
    ||||    
T  38044372 catt 38044375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 41915817 - 41915919
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    ||||||||||||||| |||| ||||||||  ||| |||||||| |||||||||  || ||||||||||||||||||||  | |||| ||||| ||||||     
T  41915817 tggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatatat-ggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaa 41915915  T
Q  104 catt 107  Q
    ||||    
T  41915916 catt 41915919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 111
Target Start/End: Complemental strand, 36361888 - 36361843
Alignment:
Q  66 tgtacaagggtgtatgagaataaatggtgtatatgtatcattactc 111  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||    
T  36361888 tgtacaagggtgtatgagaataaagggtgtctatgtatcattactc 36361843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 18207252 - 18207339
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaa 89  Q
    ||||| ||||| ||||||||||| ||||||||  |||||||||||| ||||||| || ||  | |||||||||||||||||| ||||||    
T  18207252 acgtgaaccccacacaagcacactttctctttcatctcctcttctctcttcctagtggat-agagtgtacaagggtgtatgataataaa 18207339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 36208246 - 36208306
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatg 61  Q
    |||||||||| |||||||||||  |||||||| ||||||||||||| ||||||| ||||||    
T  36208246 acgtggaccctgcacaagcacattttctctttcctctcctcttctctcttcctagtgcatg 36208306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 46374804 - 46374746
Alignment:
Q  48 cttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcatt 107  Q
    |||||||||| |||||| |||||||||||||||| ||||||||||||| |||||| ||||    
T  46374804 cttcctaatgtatgggg-tgtacaagggtgtatgggaataaatggtgtctatgtaacatt 46374746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 27744336 - 27744243
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgt 95  Q
    ||||||| ||| || |||||||  |||||| | ||||||||||||| ||||||| ||||| ||| ||||||||| | |||| |||||||||||||    
T  27744336 acgtggatccctcataagcacattttctctatcctctcctcttctctcttcctagtgcat-gggatgtacaaggatatatgggaataaatggtgt 27744243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 32564450 - 32564374
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatg 81  Q
    ||||||||||||||  |||| ||||||||  ||| |||||||| ||||||||| ||| | ||||||||||||||||||    
T  32564450 tggaccccgcacaaatacactttctctttcttcttctcttctctcttcctaatacat-gaggtgtacaagggtgtatg 32564374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 7727982 - 7728084
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    ||||||||||||||| |||| |||| |||  ||| |||||||| |||||||||  || ||||||||||||| ||||||  | |||| ||||| ||||||     
T  7727982 tggaccccgcacaagtacactttctgtttcttcttctcttctctcttcctaatatat-ggggtgtacaaggatgtatgcaattaaaaggtgtctatgtaa 7728080  T
Q  104 catt 107  Q
    ||||    
T  7728081 catt 7728084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 36361940 - 36361904
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctct 37  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  36361940 acgtggaccccacacaagcacactttctcttttctct 36361904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 6034117 - 6034226
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  6034117 acgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaagggtgtatgagaataaaaggtgtctatg 6034215  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  6034216 tatcattactc 6034226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 41236420 - 41236529
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||| ||||| ||||    
T  41236420 acgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaagggtgtatgggaataaagggtgtctatg 41236518  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  41236519 tatcattactc 41236529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 48183076 - 48182967
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  48183076 acgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcttaatgcat-ggggtgtacaagggtgtatgagaataaagggtgtctatg 48182978  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  48182977 tatcattactc 48182967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 42044394 - 42044285
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||  |||||| ||||| ||||    
T  42044394 acgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-gggatgtacaagggtgtatggaaataaagggtgtctatg 42044296  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  42044295 tatcattactc 42044285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 24995134 - 24995025
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||  |||||||||||||||||||||| |||| |||||||| ||||||||||| |||||||| ||||||| ||||| ||||    
T  24995134 acgtggaccccgcacaagcacattttctcttttctctcctcttctctcttcttaatgcat-ggggtgtacaatggtgtatgggaataaagggtgtctatg 24995036  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  24995035 tatcattactc 24995025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 41823958 - 41824060
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    |||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||| | ||||||||| |||||||||||||||||||||| ||||||     
T  41823958 tggaccccgcacaagcacactttctcttttctctcttcttctctcttcctaatgcat-gaggtgtacaaaggtgtatgagaataaatggtgtctatgtaa 41824056  T
Q  104 catt 107  Q
    ||||    
T  41824057 catt 41824060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 54473560 - 54473453
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| || ||||||||||||||||||| ||||||||| ||| || ||||||||||||||||| ||||||| |||||  |||    
T  54473560 acgtggaccccgcacaagcacactttatcttttctctcctcttctctcttcctaatacat-ggagtgtacaagggtgtatgggaataaagggtgttcatg 54473462  T
Q  101 tatcattac 109  Q
    |||||||||    
T  54473461 tatcattac 54473453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 11511489 - 11511381
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||| |||| |||||||| | ||||||||||||||||||  ||||||| |||| ||||    
T  11511489 acgtggaccccgcacaagcacactttctcttttctcttctcttctctcttcttaatgcat-gaggtgtacaagggtgtatggaaataaat-gtgtctatg 11511392  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  11511391 tatcattactc 11511381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 31910268 - 31910370
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    |||||||||||||||||||| |||||||||||||| ||||||| |||||||||| || ||| |||||||| ||||||| ||||||||||||| ||||||     
T  31910268 tggaccccgcacaagcacactttctcttttctctcatcttctctcttcctaatgtat-gggatgtacaagagtgtatgggaataaatggtgtctatgtaa 31910366  T
Q  104 catt 107  Q
    ||||    
T  31910367 catt 31910370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 29239959 - 29240064
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||||| ||||||| ||||| |||||||||||| ||||||| ||||||| ||||| ||||    
T  29239959 acgtggaccccacacaagcacactttctctttcctctcctcttctctcttcctagtgcat-ggggtgtacaagagtgtatgggaataaagggtgtctatg 29240057  T
Q  101 tatcatt 107  Q
    || ||||    
T  29240058 taacatt 29240064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 480474 - 480395
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatg 81  Q
    |||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||    
T  480474 acgtggaccccgtacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaaaggtgtatg 480395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 29234272 - 29234173
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||           |||||||||||||||||| |||| ||||    
T  29234272 acgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatg-----------gggtgtatgagaataaatagtgtctatg 29234184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 40574855 - 40574945
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgt 95  Q
    |||| |||| |||||||||| |||||||||||||||||||||| |||||||||  || |||||||||||||||||||||||||||| |||||    
T  40574855 tggatcccgaacaagcacactttctcttttctctcctcttctctcttcctaatatat-ggggtgtacaagggtgtatgagaataaaaggtgt 40574945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 50052455 - 50052350
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||| ||||||| |||||   ||||||||| |||||||| ||||||| ||||| ||||    
T  50052455 acgtggaccccgcacaagcacactttctctttcctctcctcttctctcttcctagtgcat-aaggtgtacaaaggtgtatgggaataaagggtgtctatg 50052357  T
Q  101 tatcatt 107  Q
    || ||||    
T  50052356 taacatt 50052350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 53352591 - 53352492
Alignment:
Q  3 gtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgta 102  Q
    |||||||||||||||||| || |||||||||||||||||||||| |||||||         ||||||||||||||||||| |||||| ||||| ||||||    
T  53352591 gtggaccccgcacaagcatactttctcttttctctcctcttctctcttccta---------ggtgtacaagggtgtatgaaaataaagggtgtctatgta 53352501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 111
Target Start/End: Original strand, 23608320 - 23608417
Alignment:
Q  13 cacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcattactc 111  Q
    ||||||||||| ||||||||| |||||||||||| ||||||||||||| | |||||||| || |||||| ||||||| | ||| |||||||||||||||    
T  23608320 cacaagcacactttctcttttatctcctcttctctcttcctaatgcat-gaggtgtacagggatgtatgggaataaaggatgtctatgtatcattactc 23608417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 19670740 - 19670638
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    ||||||||||||||| |||| ||||||||  ||| |||||||| ||||||||| ||| ||||||||||||||||||||  | |||| ||||| ||||||     
T  19670740 tggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacat-ggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaa 19670642  T
Q  104 catt 107  Q
    ||||    
T  19670641 catt 19670638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 50526198 - 50526093
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    |||||||  |||||||||||| | |||| ||| ||||||||||||| ||||||| ||||| |||||||||||||||||||   |||||| ||||| ||||    
T  50526198 acgtggattccgcacaagcacgctttctatttcctctcctcttctctcttcctagtgcat-ggggtgtacaagggtgtatagaaataaagggtgtttatg 50526100  T
Q  101 tatcatt 107  Q
    || ||||    
T  50526099 taacatt 50526093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 17983767 - 17983691
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatg 81  Q
    ||||||||||||||| |||| ||||||||  ||| |||||||| ||||||||| ||| | ||||||||||||||||||    
T  17983767 tggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacat-gaggtgtacaagggtgtatg 17983691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 48647753 - 48647694
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcat 60  Q
    |||||||| |||||||||||||  |||||||| ||||||||||||| ||||||| |||||    
T  48647753 acgtggactccgcacaagcacaatttctctttcctctcctcttctctcttcctagtgcat 48647694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 55475267 - 55475369
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    ||||||| ||| ||| |||| ||||||||  ||| |||||||| ||||||||| ||||||| ||||||||||||||||  | |||| ||||| ||||||     
T  55475267 tggaccctgcataagtacactttctctttcttcttctcttctctcttcctaatacatgggg-tgtacaagggtgtatgcaattaaaaggtgtctatgtaa 55475365  T
Q  104 catt 107  Q
    ||||    
T  55475366 catt 55475369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 47986284 - 47986360
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatg 81  Q
    ||||||||||||||| |||| ||||||||  | | |||||||| ||||||||| ||| ||| ||||||||||||||||    
T  47986284 tggaccccgcacaagtacactttctctttcttattctcttctctcttcctaatacat-gggatgtacaagggtgtatg 47986360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 50813913 - 50813814
Alignment:
Q  7 accccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcat 106  Q
    |||||||||||| |||| ||||||||  ||| |||||||| ||||||||| ||| | | ||||||||||||||||  | |||| ||||| |||||| |||    
T  50813913 accccgcacaagtacactttctctttcttcttctcttctctcttcctaatacat-gagatgtacaagggtgtatgcaattaaaaggtgtctatgtaacat 50813815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 29547983 - 29547881
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    |||| |||||| ||| |||| || |||||  ||| |||||||| ||||||||| ||||||| ||||||||||||||||  | |||| ||||| ||||||     
T  29547983 tggatcccgcataagtacactttttctttcttcttctcttctctcttcctaatacatgggg-tgtacaagggtgtatgcaattaaaaggtgtctatgtaa 29547885  T
Q  104 catt 107  Q
    ||||    
T  29547884 catt 29547881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 18924513 - 18924417
Alignment:
Q  10 ccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcatt 107  Q
    ||||||||| |||| ||||||||  ||| |||||||| ||||||||| |||| || |||| |||||||||||  | |||| ||||| |||||| ||||    
T  18924513 ccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatgagg-tgtaaaagggtgtatgcaattaaaaggtgtctatgtaacatt 18924417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 56300181 - 56300105
Alignment:
Q  12 gcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaa 89  Q
    |||||| ||||| |||||||| ||||||||||||| ||| |||||| || | | ||||||||  ||||||||||||||    
T  56300181 gcacaaacacactttctctttcctctcctcttctctctttctaatgtat-gagatgtacaagattgtatgagaataaa 56300105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 2e-39; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 10249409 - 10249300
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  10249409 acgtggaccccgcacaagcacactttctcttttctctcctcttttctcttcctaatgcat-ggggtgtacaagggtgtatgagaataaagggtgtctatg 10249311  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  10249310 tatcattactc 10249300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 13438416 - 13438525
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||| ||||| ||||    
T  13438416 acgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaaggatgtatgggaataaagggtgtctatg 13438514  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  13438515 tatcattactc 13438525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 28863528 - 28863647
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||| | |||||||||||||||||| ||||||| ||||| ||||    
T  28863528 acgtggaccccgcacaagcacactttctcttttatctcctcttctctcttcctaatgcat-gaggtgtacaagggtgtatgggaataaagggtgtctatg 28863626  T
Q  101 tatcattactcgtcaaaatat 121  Q
    ||||||||||| | |||||||    
T  28863627 tatcattactcataaaaatat 28863647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 17473093 - 17473202
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| | |||||||||||||||||| ||||||| ||||| ||||    
T  17473093 acgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-gaggtgtacaagggtgtatgggaataaagggtgtctatg 17473191  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  17473192 tatcattactc 17473202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 32505675 - 32505566
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||  |||| ||||    
T  32505675 acgtggaccccgcacaagcacactttctattttctctcctcttctctcttcttaatgcat-ggggtgtacaagggtgtatgagaataaagagtgtctatg 32505577  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  32505576 tatcattactc 32505566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 19930845 - 19930738
Alignment:
Q  3 gtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgta 102  Q
    ||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||| | |||||||||||||||||| ||||||| ||||| ||||||    
T  19930845 gtggaccccgcacaaacacactttctcttttctctcctcttctctcttcctaatgcat-gaggtgtacaagggtgtatgggaataaaaggtgtctatgta 19930747  T
Q  103 tcattactc 111  Q
    |||||||||    
T  19930746 tcattactc 19930738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 9058555 - 9058663
Alignment:
Q  3 gtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgta 102  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||| ||||||| ||| | ||| ||    
T  9058555 gtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaagagtgtatgggaataaagggtatttatata 9058653  T
Q  103 tcattactcg 112  Q
    ||||||||||    
T  9058654 tcattactcg 9058663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 33436127 - 33436020
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| |||||||| ||||| ||||||| ||||||||||||| | |||||||||||||||||||||||||| ||||| ||||    
T  33436127 acgtggaccccgcacaagcacactttctctttcctctcatcttctctcttcctaatgcat-gaggtgtacaagggtgtatgagaataaaaggtgtctatg 33436029  T
Q  101 tatcattac 109  Q
     ||||||||    
T  33436028 catcattac 33436020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 7465762 - 7465653
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||| ||||||||||| ||||||||| |||| ||||||| ||||||||||||| | |||||||||||||||||| ||||||| ||||| ||||    
T  7465762 acgtggaccccacacaagcacactttctcttttatctcttcttctctcttcctaatgcat-gaggtgtacaagggtgtatgggaataaagggtgtctatg 7465664  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  7465663 tatcattactc 7465653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 40701551 - 40701660
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||||  |||||||||||||||||||  |||||| ||||| ||||    
T  40701551 acgtggaccccgcacaatcacactttctcttttctctcatcttctctcttcctaatgcat-cgggtgtacaagggtgtatggaaataaaaggtgtctatg 40701649  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  40701650 tatcattactc 40701660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 20700888 - 20700993
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    |||||||||||||| |||||||| |||||||| ||||||||||||| ||||||| ||||| |||||||||||||||||||| ||||||| ||||| ||||    
T  20700888 acgtggaccccgcataagcacactttctctttcctctcctcttctctcttcctagtgcat-ggggtgtacaagggtgtatgggaataaagggtgtctatg 20700986  T
Q  101 tatcatt 107  Q
    || ||||    
T  20700987 taacatt 20700993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 28381679 - 28381573
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    ||||| |||||||||||||| |||||||||||||| ||||||| |||||||||  || ||||||||||||| |||||| ||||||| ||||| |||||||    
T  28381679 tggactccgcacaagcacactttctcttttctctcatcttctctcttcctaatatat-ggggtgtacaaggatgtatgggaataaagggtgtctatgtat 28381581  T
Q  104 cattactc 111  Q
    ||||||||    
T  28381580 cattactc 28381573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 30915536 - 30915646
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    |||||||||||| |||||||||| |||||||||||||| ||||||| ||||||||| ||| ||||||||||||||||||||  |||||  | ||| ||||    
T  30915536 acgtggaccccgtacaagcacactttctcttttctctcatcttctctcttcctaatacat-ggggtgtacaagggtgtatggaaataatggatgtctatg 30915634  T
Q  101 tatcattactcg 112  Q
    ||||||||||||    
T  30915635 tatcattactcg 30915646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 36168912 - 36169014
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    ||||||||||||||||| || |||||||||||||||| ||||| |||||||||| || |||||||||||| ||||||||||||||| ||||| ||||||     
T  36168912 tggaccccgcacaagcatactttctcttttctctcctattctctcttcctaatgtat-ggggtgtacaagagtgtatgagaataaagggtgtttatgtaa 36169010  T
Q  104 catt 107  Q
    ||||    
T  36169011 catt 36169014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 38882831 - 38882729
Alignment:
Q  8 ccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcatt 107  Q
    |||||||||||| ||| |||||||||||||  |||| || ||||||||||||||||| |||||||||||||||| ||||||||||| | |||||||||||    
T  38882831 ccccgcacaagcgcactttctcttttctcttatcttatctcttcctaatgcatgggg-tgtacaagggtgtatgggaataaatggtctctatgtatcatt 38882733  T
Q  108 actc 111  Q
    ||||    
T  38882732 actc 38882729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 4060758 - 4060867
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||| |||||| |||||||| |||| ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||  |||||| | ||| ||||    
T  4060758 acgtggatcccgcataagcacactttcttttttctctcatcttctctcttcctaatgcat-ggggtgtacaagggtgtatggaaataaaagatgtttatg 4060856  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  4060857 tatcattactc 4060867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 40613926 - 40613824
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    |||||||||||||||||||| |||||||||||||||| ||||  |||| ||||| || |||||||||||||||||||| ||||||| ||||| ||||||     
T  40613926 tggaccccgcacaagcacactttctcttttctctcctattctttcttcataatgtat-ggggtgtacaagggtgtatgggaataaagggtgtctatgtaa 40613828  T
Q  104 catt 107  Q
    ||||    
T  40613827 catt 40613824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 38273166 - 38273070
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgta 102  Q
    |||||||||||| ||||||| |||||||||||||||| ||||| |||||||||| || ||||||||||| | |||||||||||||||||||| ||||||    
T  38273166 tggaccccgcactagcacactttctcttttctctcctattctctcttcctaatgtat-ggggtgtacaa-gatgtatgagaataaatggtgtttatgta 38273070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 99
Target Start/End: Original strand, 2533201 - 2533293
Alignment:
Q  6 gaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatat 99  Q
    |||||||||||||||||| || |||||| |||||||||||| ||||| |||| || |||||||||||||||||||| ||||||| |||||||||    
T  2533201 gaccccgcacaagcacactttttcttttatctcctcttctctcttcccaatgtat-ggggtgtacaagggtgtatgggaataaagggtgtatat 2533293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 42257269 - 42257366
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgta 102  Q
    |||||||||||||||||||| |||||||||||||||||||||  |||||||||| || |||||||||||| ||||||   |||||| ||||| ||||||    
T  42257269 tggaccccgcacaagcacactttctcttttctctcctcttctttcttcctaatgtat-ggggtgtacaagagtgtatagaaataaagggtgtctatgta 42257366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 44152012 - 44152105
Alignment:
Q  13 cacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcatt 107  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||||||| | | | |||||||||||||| ||||||| ||||| |||||| ||||    
T  44152012 cacaagcacactttctctttcatctcctcttctctcttcctaatgcat-gagatatacaagggtgtatgcgaataaaaggtgtttatgtaacatt 44152105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 5574489 - 5574418
Alignment:
Q  39 ctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcattactc 111  Q
    ||||| || ||||||||||||||| | |||||||||||||||| ||||||| ||||| |||||||||||||||    
T  5574489 ctcttttctcttcctaatgcatggcg-tgtacaagggtgtatgggaataaagggtgtctatgtatcattactc 5574418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 13365429 - 13365531
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    ||||||||||||||| |||| ||||||||  ||| |||||||| ||||||||| ||| |||||||||||||||| |||  | |||| ||||| ||||||     
T  13365429 tggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacat-ggggtgtacaagggtgaatgcaattaaaaggtgtctatgtaa 13365527  T
Q  104 catt 107  Q
    ||||    
T  13365528 catt 13365531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 41758684 - 41758765
Alignment:
Q  25 ttctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcatt 107  Q
    ||||||||| |||||||||||| |||||||||  |||||| ||||||||| ||||||||||||||  |||| |||||| ||||    
T  41758684 ttctcttttatctcctcttctctcttcctaatatatgggg-tgtacaaggatgtatgagaataaaatgtgtctatgtaacatt 41758765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 2997511 - 2997435
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatg 81  Q
    ||||||||||||||| |||| ||||||||  ||| |||||||| ||||||||| ||| | ||||||||||||||||||    
T  2997511 tggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacat-gaggtgtacaagggtgtatg 2997435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 111
Target Start/End: Original strand, 27864811 - 27864873
Alignment:
Q  48 cttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcattactc 111  Q
    ||||||||| ||||||  |||||||||||||||||||||||| |||||  ||||||||||||||    
T  27864811 cttcctaatacatggga-tgtacaagggtgtatgagaataaagggtgtcaatgtatcattactc 27864873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 43490197 - 43490299
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    ||||||||||||||| |||| || |||||  ||| |||||||| ||||||||| |||  |||||||||||||||||||  | |||| ||||| ||||||     
T  43490197 tggaccccgcacaagtacactttatctttcttcttctcttctctcttcctaatacat-agggtgtacaagggtgtatgcaattaaaaggtgtctatgtaa 43490295  T
Q  104 catt 107  Q
    ||||    
T  43490296 catt 43490299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 3440052 - 3440157
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||  |||||||| ||||||||||||| ||| |||    ||  |||||||||| ||||||||  |||||| ||||| ||||    
T  3440052 acgtggaccccgcacaagcacattttctctttcctctcctcttctctctttctagaatat-agggtgtacaaaggtgtatggaaataaagggtgtctatg 3440150  T
Q  101 tatcatt 107  Q
    || ||||    
T  3440151 taacatt 3440157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17820031 - 17819971
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatg 61  Q
    ||||||||||| ||||| ||||  ||||||||  |||||||||||| ||||||||||||||    
T  17820031 acgtggaccccacacaaacacattttctctttcatctcctcttctctcttcctaatgcatg 17819971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 17823864 - 17823966
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    ||||||||  |||||||||| ||||||||  |||| ||||||| ||||| |||  |||||| ||||||||||||||||  |||||| | ||| ||||||     
T  17823864 tggaccccatacaagcacactttctctttcatctcatcttctctcttccaaatatatgggg-tgtacaagggtgtatgtaaataaaggatgtctatgtaa 17823962  T
Q  104 catt 107  Q
    ||||    
T  17823963 catt 17823966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 38732430 - 38732532
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    ||||||||||||||| |||| ||||||||  ||| |||||||| ||||||||| ||| | | ||||||||| ||||||  | |||| ||||| ||||||     
T  38732430 tggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacat-gagatgtacaaggatgtatgcaattaaaaggtgtctatgtaa 38732528  T
Q  104 catt 107  Q
    ||||    
T  38732529 catt 38732532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 195
Target Start/End: Original strand, 44728659 - 44728705
Alignment:
Q  149 aagagatagatagagagaaaatatggtgtagaatgagtgtatgaaaa 195  Q
    |||||| |||||||| ||||||| ||||| |||||||||||||||||    
T  44728659 aagagagagatagagcgaaaataaggtgttgaatgagtgtatgaaaa 44728705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 45097759 - 45097683
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatg 81  Q
    ||||||||||||||| |||| ||||||||  ||| |||||||| ||||||||| |||  || |||||||| |||||||    
T  45097759 tggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacat-cggatgtacaagagtgtatg 45097683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 41575223 - 41575271
Alignment:
Q  13 cacaagcacacattctcttttctctcctcttctcccttcctaatgcatg 61  Q
    ||||||||||| ||||||||  |||||||||||| | ||||||||||||    
T  41575223 cacaagcacactttctctttcatctcctcttctctcgtcctaatgcatg 41575271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 5e-37; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 33149665 - 33149556
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||| ||||| ||||    
T  33149665 acgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaagggtgtacgagaataaagggtgtctatg 33149567  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  33149566 tatcattactc 33149556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 18520911 - 18520802
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||| | ||||||||||||||||||| |||||| ||||| ||||    
T  18520911 acgtggaccccgcacaagcacactttctcttttatctcctcttctctcttcctaatgcat-gaggtgtacaagggtgtatgaaaataaagggtgtctatg 18520813  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  18520812 tatcattactc 18520802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 40145480 - 40145589
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||  | ||||||||||||| |||||||||||| ||||| ||||    
T  40145480 acgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgca-cgaggtgtacaagggtatatgagaataaagggtgtctatg 40145578  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  40145579 tatcattactc 40145589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 2740347 - 2740456
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||| ||||||||||||||| ||||||||||||||| |||||| ||||||||||||| ||| |||||||||||||||| ||||||| ||||| ||||    
T  2740347 acgtggatcccgcacaagcacactttctcttttctctccccttctctcttcctaatgcat-gggatgtacaagggtgtatgggaataaagggtgtctatg 2740445  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  2740446 tatcattactc 2740456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 14831887 - 14831998
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||| ||||||||||||||| |||| |||| |||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||| ||||| ||||    
T  14831887 acgtggatcccgcacaagcacactttcttttttttctcctcttctctcttcctaatgcat-ggggtgtacaaggatgtatgggaataaagggtgtctatg 14831985  T
Q  101 tatcattactcgt 113  Q
    |||||||||||||    
T  14831986 tatcattactcgt 14831998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 13811725 - 13811834
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||| ||| ||||||||| |||||| ||||||||||||| ||||    
T  13811725 acgtggaccccgcacaagcacactttctcttctctctcctcttctctcttcctaatgcat-gggatgtacaaggatgtatgggaataaatggtgtctatg 13811823  T
Q  101 tatcattactcg 112  Q
    ||| ||||||||    
T  13811824 tat-attactcg 13811834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 35785272 - 35785381
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||| ||||||||| ||||| |||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||  |||||| ||||| ||||    
T  35785272 acgtggatcccgcacaatcacactttctcttttctctcatcttctctcttcctaatgcat-ggggtgtacaagggtgtatggaaataaaaggtgtctatg 35785370  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  35785371 tatcattactc 35785381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 36732969 - 36732876
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgt 95  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| | |||||||||||||||||| ||||||| |||||    
T  36732969 acgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-gaggtgtacaagggtgtatgggaataaagggtgt 36732876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 15409634 - 15409532
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    ||||||||||||||||||||  ||||||||||||||||||||| |||||||||| || |||||||||||||||||||| ||||||| ||||| ||||||     
T  15409634 tggaccccgcacaagcacactctctcttttctctcctcttctctcttcctaatgtat-ggggtgtacaagggtgtatgcgaataaagggtgtttatgtaa 15409536  T
Q  104 catt 107  Q
    ||||    
T  15409535 catt 15409532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 6679774 - 6679876
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    |||||||||||||| ||||  |||||||||||||||||||||| |||||||||| ||  |||||||||||||||||||| |||||||| ||| ||||||     
T  6679774 tggaccccgcacaaacacattttctcttttctctcctcttctctcttcctaatgtat-agggtgtacaagggtgtatgacaataaatgatgtctatgtaa 6679872  T
Q  104 catt 107  Q
    ||||    
T  6679873 catt 6679876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 26720592 - 26720678
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatg 91  Q
    |||| ||||||||||||||| ||||||||||||| |||||||| |||||||||| || ||||||||| ||||||||||||||||||||    
T  26720592 tggatcccgcacaagcacactttctcttttctcttctcttctctcttcctaatgtat-ggggtgtactagggtgtatgagaataaatg 26720678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 26990341 - 26990427
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatg 91  Q
    |||| ||||||||||||||| ||||||||||||| |||||||| |||||||||| || ||||||||| ||||||||||||||||||||    
T  26990341 tggatcccgcacaagcacactttctcttttctcttctcttctctcttcctaatgtat-ggggtgtactagggtgtatgagaataaatg 26990427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 31009061 - 31009166
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||| ||||||||||||||| |||| ||| |||| |||||||| ||||||| ||||| ||||||||||| |||||||||||||||| ||||| ||||    
T  31009061 acgtggatcccgcacaagcacactttctatttcctcttctcttctctcttcctagtgcat-ggggtgtacaaaggtgtatgagaataaagggtgtctatg 31009159  T
Q  101 tatcatt 107  Q
    || ||||    
T  31009160 taacatt 31009166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 36875639 - 36875538
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||| ||||||||||||||| ||||||||| |||||||||||| ||||||||| ||| |||||||||||||||| |    |||||||||||| ||||    
T  36875639 acgtggatcccgcacaagcacactttctcttttttctcctcttctctcttcctaatacat-ggggtgtacaagggtgga----aataaatggtgtctatg 36875545  T
Q  101 tatcatt 107  Q
    || ||||    
T  36875544 taacatt 36875538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 33825339 - 33825258
Alignment:
Q  13 cacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgt 95  Q
    ||||||||||| ||||||||| ||| |||||||| ||||||| ||||| |||||||| |||| ||||||||||||||||||||    
T  33825339 cacaagcacactttctcttttatcttctcttctctcttcctagtgcat-ggggtgtagaaggctgtatgagaataaatggtgt 33825258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 35943919 - 35943814
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||| ||| ||||||||||| |||||||| |||||||||| || ||||||| ||||| ||||||||||||||||||||  ||||||  |||| ||||    
T  35943919 acgtggatcccacacaagcacactttctctttcctctcctcttttctcttcctagtgcat-ggggtgtacaagggtgtatggaaataaaatgtgtctatg 35943821  T
Q  101 tatcatt 107  Q
    || ||||    
T  35943820 taacatt 35943814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 2177437 - 2177524
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaa 89  Q
    ||||||| ||| ||||||||||  |||||||| ||||||||||||| ||||||| |||||  || ||||||||||||||||||||||||    
T  2177437 acgtggatcccacacaagcacattttctctttcctctcctcttctctcttcctagtgcat-tggatgtacaagggtgtatgagaataaa 2177524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 28177851 - 28177911
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggg 64  Q
    |||||||||||||| ||||| |||||||||||||||||||| | |||||||||| ||||||    
T  28177851 tggaccccgcacaaacacactttctcttttctctcctcttccctcttcctaatgtatgggg 28177911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 2252192 - 2252090
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    ||||||||||||||| |||| ||||||||  ||| |||||||| |||||||||  || ||||||||||||||||||||  | |||| ||||| ||||||     
T  2252192 tggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatatat-ggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaa 2252094  T
Q  104 catt 107  Q
    ||||    
T  2252093 catt 2252090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 3921289 - 3921187
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    ||||||||||||||| |||| ||||||||  ||| |||||||| |||||||||  || ||||||||||||||||||||  | |||| ||||| ||||||     
T  3921289 tggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatatat-ggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaa 3921191  T
Q  104 catt 107  Q
    ||||    
T  3921190 catt 3921187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 31132448 - 31132516
Alignment:
Q  42 ttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcattactc 111  Q
    ||||| ||| |||||||||| || ||||||||||||||||| |||||| ||||| |||||||||||||||    
T  31132448 ttctctctttctaatgcatgagg-tgtacaagggtgtatgaaaataaagggtgtttatgtatcattactc 31132516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 20073543 - 20073456
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaa 89  Q
    |||||||||| |||||||||||| |||| ||| ||||||||||||| ||||||| | ||| | | | ||||| ||||||||||||||||    
T  20073543 acgtggaccctgcacaagcacactttctatttcctctcctcttctctcttcctagttcat-gagatttacaaaggtgtatgagaataaa 20073456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 42414327 - 42414275
Alignment:
Q  3 gtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaa 55  Q
    ||||||||||||||||||||| || |||||||| |||||||||| ||||||||    
T  42414327 gtggaccccgcacaagcacactttatcttttctttcctcttctctcttcctaa 42414275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 16115296 - 16115250
Alignment:
Q  65 gtgtacaagggtgtatgagaataaatggtgtatatgtatcattactc 111  Q
    ||||||||| ||||||||||||||| ||||| |||||||||||||||    
T  16115296 gtgtacaagagtgtatgagaataaagggtgtctatgtatcattactc 16115250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 39557541 - 39557457
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaa 89  Q
    ||||||||  |||| ||||| ||||||||| |||||||||||| ||||||||| ||| | |||||||| || | ||||||||||||    
T  39557541 tggaccccatacaatcacactttctcttttatctcctcttctctcttcctaatacat-gaggtgtacatggatctatgagaataaa 39557457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 5e-37; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 33644273 - 33644382
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||| ||||||| ||||| ||||    
T  33644273 acgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtataagggtgtatgggaataaagggtgtctatg 33644371  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  33644372 tatcattactc 33644382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 53982084 - 53982193
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||| ||||| ||||    
T  53982084 acgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaaggttgtatgggaataaagggtgtctatg 53982182  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  53982183 tatcattactc 53982193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 31456764 - 31456871
Alignment:
Q  3 gtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgta 102  Q
    ||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||| |||||||||||||||| ||| ||||||| ||||| ||||||    
T  31456764 gtggaccccgcacaagcacactttctcttttctctcctcttttctcttcctaatgcat-ggggtgtacaagggtgcatgggaataaagggtgtttatgta 31456862  T
Q  103 tcattactc 111  Q
    |||||||||    
T  31456863 tcattactc 31456871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 20764939 - 20764837
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    ||||||||| |||||||||| |||||||||||||| ||||||| |||||||||| || |||||||||||||||||||||||||||||||||| ||||||     
T  20764939 tggaccccgtacaagcacactttctcttttctctcatcttctctcttcctaatgtat-ggggtgtacaagggtgtatgagaataaatggtgtctatgtaa 20764841  T
Q  104 catt 107  Q
    ||||    
T  20764840 catt 20764837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 8076466 - 8076571
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||| ||||||| ||||| |||||||||||  ||||||||||||||||||||| ||||    
T  8076466 acgtggaccccgcacaagcacactttctctttcctctcctcttctctcttcctagtgcat-ggggtgtacaaaagtgtatgagaataaatggtgtctatg 8076564  T
Q  101 tatcatt 107  Q
    || ||||    
T  8076565 taacatt 8076571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 17470478 - 17470587
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||| ||||||||||| |||||||||||||| ||||||| ||||||||||||| ||| |||||||   |||||||||||||||||||| ||||    
T  17470478 acgtggaccccacacaagcacactttctcttttctctcatcttctctcttcctaatgcat-gggatgtacaaatatgtatgagaataaatggtgtctatg 17470576  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  17470577 tatcattactc 17470587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 54868922 - 54868813
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||||  |||||||||||||||||||  |||||| ||||| ||||    
T  54868922 acgtggaccccgcacaatcacactttctcttttctctcatcttctctcttcctaatgcat-agggtgtacaagggtgtatggaaataaaaggtgtctatg 54868824  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  54868823 tatcattactc 54868813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 49607487 - 49607603
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||| ||| ||||||||||| ||||||||||||||||||| || ||||||||||||| |  ||||||||||||||||| ||||||| ||||| ||||    
T  49607487 acgtggatcccacacaagcacactttctcttttctctcctcttttctcttcctaatgcat-gacgtgtacaagggtgtatgggaataaagggtgtctatg 49607585  T
Q  101 tatcattactcgtcaaaa 118  Q
    ||||||||||||| ||||    
T  49607586 tatcattactcgtaaaaa 49607603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 52629373 - 52629482
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    |||||||||||| |||||||||| |||||||||||||| ||||||| ||||||||||||| ||| ||||||||||||||||  |||||  ||||| ||||    
T  52629373 acgtggaccccgtacaagcacactttctcttttctctcatcttctctcttcctaatgcat-gggatgtacaagggtgtatggaaataatgggtgtctatg 52629471  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  52629472 tatcattactc 52629482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 51419382 - 51419282
Alignment:
Q  6 gaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatca 105  Q
    |||||||||||||||||| |||||||||||||||| ||||| |||||||||| || ||||||||||||||||||||  |||||| ||||| |||||| ||    
T  51419382 gaccccgcacaagcacactttctcttttctctcctattctctcttcctaatgtat-ggggtgtacaagggtgtatggaaataaaaggtgtttatgtaaca 51419284  T
Q  106 tt 107  Q
    ||    
T  51419283 tt 51419282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 11347946 - 11347844
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    ||||||| ||| |||||||| |||||||||||||||||||||| |||||||||| || |||||||| ||||||||||| ||||||| ||||| ||||||     
T  11347946 tggaccctgcataagcacactttctcttttctctcctcttctctcttcctaatgtat-ggggtgtataagggtgtatgggaataaagggtgtctatgtac 11347848  T
Q  104 catt 107  Q
    ||||    
T  11347847 catt 11347844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 36707438 - 36707347
Alignment:
Q  18 gcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcattact 110  Q
    |||||| |||||||||||||||||||||| ||||||||||||| | ||||||||||  |||||| ||||||| ||||| ||||||||||||||    
T  36707438 gcacactttctcttttctctcctcttctctcttcctaatgcat-gaggtgtacaagaatgtatgggaataaaaggtgtctatgtatcattact 36707347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 30801757 - 30801655
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    |||||||| ||||||||||  |||||||| ||||| ||||||| ||||||| | ||||||| |||||||||||||||||||||||| ||||| ||||||     
T  30801757 tggaccccacacaagcacattttctctttcctctcatcttctctcttcctagtacatgggg-tgtacaagggtgtatgagaataaaaggtgtctatgtaa 30801659  T
Q  104 catt 107  Q
    ||||    
T  30801658 catt 30801655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 41189788 - 41189686
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    |||||||||||||||||||| |||||||||||||||||||||  |||||||||| || || ||||||||| |||||||  |||||| ||||| ||||||     
T  41189788 tggaccccgcacaagcacactttctcttttctctcctcttctttcttcctaatgtat-ggagtgtacaagagtgtatggaaataaagggtgtctatgtaa 41189690  T
Q  104 catt 107  Q
    ||||    
T  41189689 catt 41189686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 9563072 - 9563179
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||| || |||||| ||||| |||||| ||||||||||||||| ||||||||||||| | | ||||||| |||||||| ||||||| ||| | ||||    
T  9563072 acgtggatcctgcacaaacacactttctctcttctctcctcttctctcttcctaatgcat-gagttgtacaaaggtgtatgggaataaagggtatctatg 9563170  T
Q  101 tatcattac 109  Q
    |||||||||    
T  9563171 tatcattac 9563179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 47531944 - 47532043
Alignment:
Q  7 accccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcat 106  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||||||||| || ||  |||||||| ||||||| ||||||| ||||| |||||| |||    
T  47531944 accccgcacaagcacactttctcttttctctcctattctctcttcctaatgtat-ggaatgtacaagtgtgtatgggaataaagggtgtttatgtaacat 47532042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 26141556 - 26141452
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttc--tcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgt 101  Q
    |||||||| ||||||||||| ||||||||||||||||||||  || |||||||||| || |||||||||||| |||||||  |||||| ||||| |||||    
T  26141556 tggaccccacacaagcacactttctcttttctctcctcttctttctcttcctaatgtat-ggggtgtacaagagtgtatggaaataaagggtgtctatgt 26141458  T
Q  102 atcatt 107  Q
    | ||||    
T  26141457 aacatt 26141452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 35536711 - 35536804
Alignment:
Q  13 cacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcatt 107  Q
    ||||||||||| | ||||||  ||| |||||||| ||||||| ||||||||| |||| ||||||||||||||||||||||||| |||||| ||||    
T  35536711 cacaagcacacttcctctttcatcttctcttctctcttcctagtgcatgggg-tgtagaagggtgtatgagaataaatggtgtctatgtaacatt 35536804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 35965809 - 35965704
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||| || |||||||||||| |||||||| |||||||||| ||  ||| |||| |||| || |||||||||||||||||||||||| ||||| ||||    
T  35965809 acgtggatcctgcacaagcacactttctctttcctctcctcttttcttttcttaattcatgagg-tgtacaagggtgtatgagaataaaaggtgtctatg 35965711  T
Q  101 tatcatt 107  Q
    || ||||    
T  35965710 taacatt 35965704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 11095356 - 11095285
Alignment:
Q  39 ctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcattactc 111  Q
    ||||| || ||||||||||||| ||| |||||||||||||||||||||||| ||||| |||||||||||||||    
T  11095356 ctcttttctcttcctaatgcatcggg-tgtacaagggtgtatgagaataaagggtgtctatgtatcattactc 11095285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 36331353 - 36331251
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    ||||||||||||||| |||| ||||||||  ||| |||||||| ||||||||| ||| ||||||||||||||||||||  | |||| | ||||||||||     
T  36331353 tggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacat-ggggtgtacaagggtgtatgcaattaaaagatgtatatgtaa 36331255  T
Q  104 catt 107  Q
    ||||    
T  36331254 catt 36331251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 14623864 - 14623761
Alignment:
Q  3 gtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgta 102  Q
    ||||||| | ||||||||||| ||||||||  ||| |||||||| ||| ||| |||||| || |||| |||| |||||||||||||||||||| ||||||    
T  14623864 gtggacctcacacaagcacactttctctttcatcttctcttctctctttctagtgcatgagg-tgtagaaggatgtatgagaataaatggtgtctatgta 14623766  T
Q  103 tcatt 107  Q
     ||||    
T  14623765 acatt 14623761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 110
Target Start/End: Complemental strand, 27714892 - 27714822
Alignment:
Q  39 ctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcattact 110  Q
    |||||||| ||||| ||| ||||||| |||||||||||||| |||||||||  |||||||||||||||||||    
T  27714892 ctcttctctcttcccaatacatgggg-tgtacaagggtgtacgagaataaagagtgtatatgtatcattact 27714822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 48587087 - 48587019
Alignment:
Q  42 ttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcattactc 111  Q
    ||||| ||||||||||||||||  ||||||||||| |||| ||||||| ||||| |||||||||||||||    
T  48587087 ttctctcttcctaatgcatggga-tgtacaagggtatatgggaataaagggtgtctatgtatcattactc 48587019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 45058577 - 45058475
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtat 103  Q
    ||||||||||||||| | || ||||||||  ||| |||||||| ||||||||| ||| ||||||||||| ||||||||  | |||| ||||| ||||||     
T  45058577 tggaccccgcacaagtatactttctctttcttcttctcttctctcttcctaatacat-ggggtgtacaatggtgtatgcaattaaaaggtgtctatgtaa 45058479  T
Q  104 catt 107  Q
    ||||    
T  45058478 catt 45058475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 1758483 - 1758404
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatga 82  Q
    |||||||| || ||||| ||||  ||||||||  |||||||||||| |||||||||||||  |||||||||| |||||||||    
T  1758483 acgtggactccacacaaacacattttctctttcatctcctcttctctcttcctaatgcat--gggtgtacaaaggtgtatga 1758404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 8956847 - 8956940
Alignment:
Q  13 cacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcatt 107  Q
    ||||||||||| | ||||||  ||| |||||||| ||||||| ||||  ||| |||| ||||||||||||||||||||| ||| |||||| ||||    
T  8956847 cacaagcacacttcctctttcatcttctcttctctcttcctagtgcacaggg-tgtagaagggtgtatgagaataaatgctgtctatgtaacatt 8956940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 26754771 - 26754821
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttccta 54  Q
    |||||||||||||||||||  |||||||| ||||||||||||| |||||||    
T  26754771 tggaccccgcacaagcacattttctctttcctctcctcttctctcttccta 26754821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 48375730 - 48375680
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttctcccttccta 54  Q
    |||||||||||||||||||  |||||||| ||||||||||||| |||||||    
T  48375730 tggaccccgcacaagcacattttctctttcctctcctcttctctcttccta 48375680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 11907447 - 11907488
Alignment:
Q  4 tggaccccgcacaagcacacattctcttttctctcctcttct 45  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  11907447 tggaccccgcacaagcacattttctcttttctctcctcttct 11907488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 13898080 - 13897989
Alignment:
Q  3 gtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgt 95  Q
    ||||||| | ||||||||||| ||||||||  ||| |||||||| || |||| || |||||| |||| ||  |||||||||||||||||||||    
T  13898080 gtggacctcacacaagcacactttctctttcatcttctcttctctctccctagtgtatgggg-tgtagaaaagtgtatgagaataaatggtgt 13897989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 33118878 - 33118784
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctc-ttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgt 95  Q
    ||||||| ||| || || ||||| |||||||| |||||||| ||||| || |||| ||||||||| ||||||||||||||||  |||||| |||||    
T  33118878 acgtggatccctcagaaacacactttctctttcctctcctccttctctctccctagtgcatgggg-tgtacaagggtgtatggaaataaagggtgt 33118784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 43746436 - 43746517
Alignment:
Q  25 ttctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcatt 107  Q
    ||||||||  |||||||||||  ||||||| |||||| || ||||||||||||||||| || ||| ||||| |||||| ||||    
T  43746436 ttctctttcatctcctcttctttcttcctagtgcatgagg-tgtacaagggtgtatgacaacaaagggtgtttatgtaacatt 43746517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24699981 - 24699928
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttccta 54  Q
    |||||||||| | |||| ||||| |||||||| ||||||||||||| |||||||    
T  24699981 acgtggaccctgtacaaacacactttctctttcctctcctcttctctcttccta 24699928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 39670086 - 39670161
Alignment:
Q  3 gtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgta 79  Q
    ||||||| || ||| |||||| | |||||||||||||||||||| |||| ||||| || | | ||||||||||||||    
T  39670086 gtggacctcgtacacgcacacttcctcttttctctcctcttctctcttcttaatgtat-gagatgtacaagggtgta 39670161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 4102 - 4211
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||| |||||| |||||||| ||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||| ||||    
T  4102 acgtggatcccgcataagcacactttctcttttctcttctcttctctcttcctaatgcat-ggggtgtacaagggtgtatgggaataaatggtgtctatg 4200  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  4201 tatcattactc 4211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 10136 - 10027
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||| || |||||||||| |||||||||||||||||||||| |||||||||||||  |||||||||||||||||||  |||||  ||||| ||||    
T  10136 acgtggaccgcgtacaagcacactttctcttttctctcctcttctctcttcctaatgcat-agggtgtacaagggtgtatggaaataatgggtgtctatg 10038  T
Q  101 tatcattactc 111  Q
    |||||||||||    
T  10037 tatcattactc 10027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 107
Target Start/End: Complemental strand, 948 - 851
Alignment:
Q  9 cccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcatt 107  Q
    ||||||||||||||| |||||||| ||||||||||||| ||||||| ||||| |||||||||||| ||||||| ||||||| ||||| |||||| ||||    
T  948 cccgcacaagcacactttctctttcctctcctcttctctcttcctagtgcat-ggggtgtacaagagtgtatgggaataaagggtgtttatgtaacatt 851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 107
Target Start/End: Complemental strand, 948 - 851
Alignment:
Q  9 cccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatgtatcatt 107  Q
    ||||||||||||||| |||||||| ||||||||||||| ||||||| ||||| |||||||||||| ||||||| ||||||| ||||| |||||| ||||    
T  948 cccgcacaagcacactttctctttcctctcctcttctctcttcctagtgcat-ggggtgtacaagagtgtatgggaataaagggtgtttatgtaacatt 851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 8890 - 8785
Alignment:
Q  1 acgtggaccccgcacaagcacacattctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgtatgagaataaatggtgtatatg 100  Q
    ||||||||||| |||||| |||  |||||||| ||| | ||||||| |||||||||  |||||| ||||||||||||||| |||||||| ||||| ||||    
T  8890 acgtggaccccacacaagtacattttctctttcctcccatcttctctcttcctaatatatgggg-tgtacaagggtgtataagaataaaaggtgtctatg 8792  T
Q  101 tatcatt 107  Q
    || ||||    
T  8791 taacatt 8785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University