View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16569_low_24 (Length: 499)

Name: NF16569_low_24
Description: NF16569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16569_low_24
NF16569_low_24
[»] chr7 (5 HSPs)
chr7 (14-103)||(16157174-16157263)
chr7 (14-103)||(21368483-21368572)
chr7 (41-97)||(22707558-22707614)
chr7 (175-266)||(44356652-44356743)
chr7 (99-136)||(21369457-21369494)
[»] scaffold0003 (1 HSPs)
scaffold0003 (14-103)||(289110-289199)
[»] chr4 (3 HSPs)
chr4 (14-103)||(11475790-11475879)
chr4 (99-136)||(34454924-34454961)
chr4 (99-136)||(11474846-11474883)
[»] chr3 (6 HSPs)
chr3 (14-103)||(33757808-33757897)
chr3 (14-96)||(13179725-13179807)
chr3 (14-96)||(13184383-13184465)
chr3 (99-136)||(13180726-13180763)
chr3 (99-136)||(13185260-13185297)
chr3 (99-136)||(33758804-33758841)
[»] chr2 (3 HSPs)
chr2 (14-103)||(21465107-21465196)
chr2 (14-103)||(44794592-44794681)
chr2 (14-103)||(44794894-44794983)
[»] scaffold0359 (1 HSPs)
scaffold0359 (14-103)||(8605-8694)
[»] chr8 (5 HSPs)
chr8 (14-103)||(16417394-16417483)
chr8 (14-103)||(17459695-17459784)
chr8 (14-103)||(18774142-18774231)
chr8 (175-266)||(20135328-20135419)
chr8 (99-136)||(18775140-18775177)
[»] chr6 (4 HSPs)
chr6 (14-103)||(21299234-21299323)
chr6 (41-103)||(9344249-9344310)
chr6 (99-136)||(12638793-12638830)
chr6 (99-136)||(21302617-21302654)
[»] chr5 (2 HSPs)
chr5 (14-103)||(22821135-22821224)
chr5 (99-136)||(22825867-22825904)
[»] chr1 (2 HSPs)
chr1 (14-103)||(37260555-37260644)
chr1 (99-127)||(37259621-37259649)
[»] scaffold0671 (2 HSPs)
scaffold0671 (14-103)||(2272-2361)
scaffold0671 (99-127)||(1227-1255)
[»] scaffold0065 (1 HSPs)
scaffold0065 (14-103)||(33618-33707)
[»] scaffold0002 (1 HSPs)
scaffold0002 (14-96)||(127181-127263)
[»] scaffold0512 (1 HSPs)
scaffold0512 (99-136)||(4-41)


Alignment Details
Target: chr7 (Bit Score: 70; Significance: 2e-31; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 16157263 - 16157174
Alignment:
Q  14 atgaactaaaaatattgttaatgaaaggatgtgccaaaaggaaataaaaattatgtattgggatttattttaacaatgatttgagttgaa 103  Q
    |||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||| ||||| ||||||||||||||||||    
T  16157263 atgaactaaaaatattgttaatgaaagggtgtgccaaaaagaaatgaaaattatgtattgggattaattttgacaatgatttgagttgaa 16157174  T

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Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 21368483 - 21368572
Alignment:
Q  14 atgaactaaaaatattgttaatgaaaggatgtgccaaaaggaaataaaaattatgtattgggatttattttaacaatgatttgagttgaa 103  Q
    |||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||| ||||| ||||||||||||||||||    
T  21368483 atgaactaaaaatattgttaatgaaagggtgtgccaaaaggaaacgaaaattatgtattgggattaattttgacaatgatttgagttgaa 21368572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 22707558 - 22707614
Alignment:
Q  41 gatgtgccaaaaggaaataaaaattatgtattgggatttattttaacaatgatttga 97  Q
    |||||||||||||||||  ||||||||||||||||||| ||||| | ||||||||||    
T  22707558 gatgtgccaaaaggaaaagaaaattatgtattgggattaattttgataatgatttga 22707614  T

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Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 266
Target Start/End: Complemental strand, 44356743 - 44356652
Alignment:
Q  175 gggcctggttgtgagcttacggagtccccgttcatgcttggaatgaagtgtttttcaggttgtgtgtgaagggagttggacggtttattcat 266  Q
    |||| |||||| ||| |||||| || ||| | |||||||||||||| |  || |||||| ||||||||||  | ||||||||||||||||||    
T  44356743 gggcttggttgcgagtttacggtgttcccatacatgcttggaatgatgatttcttcaggatgtgtgtgaatcgtgttggacggtttattcat 44356652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 21369457 - 21369494
Alignment:
Q  99 ttgaattgaagcacttgtgtcatggacaattatgccct 136  Q
    |||||||||||||||||||||||||||||  |||||||    
T  21369457 ttgaattgaagcacttgtgtcatggacaaccatgccct 21369494  T

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Target: scaffold0003 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 289199 - 289110
Alignment:
Q  14 atgaactaaaaatattgttaatgaaaggatgtgccaaaaggaaataaaaattatgtattgggatttattttaacaatgatttgagttgaa 103  Q
    |||||||||||||||||||||||||||| |||||||||| ||||  ||||||||||||||||||| ||||| ||||||||||||||||||    
T  289199 atgaactaaaaatattgttaatgaaagggtgtgccaaaaagaaacgaaaattatgtattgggattaattttgacaatgatttgagttgaa 289110  T

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Target: chr4 (Bit Score: 66; Significance: 6e-29; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 11475879 - 11475790
Alignment:
Q  14 atgaactaaaaatattgttaatgaaaggatgtgccaaaaggaaataaaaattatgtattgggatttattttaacaatgatttgagttgaa 103  Q
    |||||||||||||||||||||||||||| |||||||||| ||||  ||||||||||||||||||| ||||| ||||||||||||||||||    
T  11475879 atgaactaaaaatattgttaatgaaagggtgtgccaaaaagaaacgaaaattatgtattgggattaattttgacaatgatttgagttgaa 11475790  T

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Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 34454961 - 34454924
Alignment:
Q  99 ttgaattgaagcacttgtgtcatggacaattatgccct 136  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34454961 ttgaattgaagcacttgtgtcatggacaattatgccct 34454924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 11474883 - 11474846
Alignment:
Q  99 ttgaattgaagcacttgtgtcatggacaattatgccct 136  Q
    |||||||||||||||||||||||||||||  |||||||    
T  11474883 ttgaattgaagcacttgtgtcatggacaaccatgccct 11474846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 6e-29; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 33757808 - 33757897
Alignment:
Q  14 atgaactaaaaatattgttaatgaaaggatgtgccaaaaggaaataaaaattatgtattgggatttattttaacaatgatttgagttgaa 103  Q
    |||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||| ||||| |||||| |||||||||||    
T  33757808 atgaactaaaaatattgttaatgaaagggtgtgccaaaaggaaacgaaaattatgtattgggattaattttgacaatggtttgagttgaa 33757897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 13179725 - 13179807
Alignment:
Q  14 atgaactaaaaatattgttaatgaaaggatgtgccaaaaggaaataaaaattatgtattgggatttattttaacaatgatttg 96  Q
    |||||||||||||||||||||||||||| |||||||| | ||||  ||||||||||||||||||| ||||| |||||||||||    
T  13179725 atgaactaaaaatattgttaatgaaagggtgtgccaacaagaaacgaaaattatgtattgggattaattttgacaatgatttg 13179807  T

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Target: chr3; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 13184383 - 13184465
Alignment:
Q  14 atgaactaaaaatattgttaatgaaaggatgtgccaaaaggaaataaaaattatgtattgggatttattttaacaatgatttg 96  Q
    |||||||||||||||||||||||||||| |||||||| | ||||  ||||||||||||||||||| ||||| |||||||||||    
T  13184383 atgaactaaaaatattgttaatgaaagggtgtgccaacaagaaacgaaaattatgtattgggattaattttgacaatgatttg 13184465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 13180726 - 13180763
Alignment:
Q  99 ttgaattgaagcacttgtgtcatggacaattatgccct 136  Q
    |||||||||||||||||||||||||||||  |||||||    
T  13180726 ttgaattgaagcacttgtgtcatggacaaccatgccct 13180763  T

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Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 13185260 - 13185297
Alignment:
Q  99 ttgaattgaagcacttgtgtcatggacaattatgccct 136  Q
    |||||||||||||||||||||||||||||  |||||||    
T  13185260 ttgaattgaagcacttgtgtcatggacaaccatgccct 13185297  T

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Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 33758804 - 33758841
Alignment:
Q  99 ttgaattgaagcacttgtgtcatggacaattatgccct 136  Q
    |||||||||||||||||||||||||||||  |||||||    
T  33758804 ttgaattgaagcacttgtgtcatggacaaccatgccct 33758841  T

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Target: chr2 (Bit Score: 66; Significance: 6e-29; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 21465107 - 21465196
Alignment:
Q  14 atgaactaaaaatattgttaatgaaaggatgtgccaaaaggaaataaaaattatgtattgggatttattttaacaatgatttgagttgaa 103  Q
    |||||||||||||||||||||||||||| |||||||||| ||||  ||||||||||||||||||| ||||| ||||||||||||||||||    
T  21465107 atgaactaaaaatattgttaatgaaagggtgtgccaaaaagaaacgaaaattatgtattgggattaattttgacaatgatttgagttgaa 21465196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 44794592 - 44794681
Alignment:
Q  14 atgaactaaaaatattgttaatgaaaggatgtgccaaaaggaaataaaaattatgtattgggatttattttaacaatgatttgagttgaa 103  Q
    |||||||||||||||||||||||||||| |||||||| | ||||  ||||||||||||||||||| ||||| ||||||||||||||||||    
T  44794592 atgaactaaaaatattgttaatgaaagggtgtgccaacaagaaacgaaaattatgtattgggattaattttgacaatgatttgagttgaa 44794681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 44794983 - 44794894
Alignment:
Q  14 atgaactaaaaatattgttaatgaaaggatgtgccaaaaggaaataaaaattatgtattgggatttattttaacaatgatttgagttgaa 103  Q
    |||||||||||||||||||||||||||| |||||||| | ||||  ||||||||||||||||||| ||||| ||||||||||||||||||    
T  44794983 atgaactaaaaatattgttaatgaaagggtgtgccaacaagaaacgaaaattatgtattgggattaattttgacaatgatttgagttgaa 44794894  T

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Target: scaffold0359 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 8605 - 8694
Alignment:
Q  14 atgaactaaaaatattgttaatgaaaggatgtgccaaaaggaaataaaaattatgtattgggatttattttaacaatgatttgagttgaa 103  Q
    |||||||||||||||||||||||||||| |||||||| | ||||  ||||||||||||||||||| ||||| ||||||||||||||||||    
T  8605 atgaactaaaaatattgttaatgaaagggtgtgccaacaagaaacgaaaattatgtattgggattaattttgacaatgatttgagttgaa 8694  T

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Target: chr8 (Bit Score: 62; Significance: 1e-26; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 16417394 - 16417483
Alignment:
Q  14 atgaactaaaaatattgttaatgaaaggatgtgccaaaaggaaataaaaattatgtattgggatttattttaacaatgatttgagttgaa 103  Q
    |||||||||||||||||||||||||||| |||||||||| ||||  |||||||||||||| |||| ||||| ||||||||||||||||||    
T  16417394 atgaactaaaaatattgttaatgaaagggtgtgccaaaaagaaacgaaaattatgtattgagattaattttgacaatgatttgagttgaa 16417483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 17459695 - 17459784
Alignment:
Q  14 atgaactaaaaatattgttaatgaaaggatgtgccaaaaggaaataaaaattatgtattgggatttattttaacaatgatttgagttgaa 103  Q
    |||| |||||| |||||||||||||||| |||||||||||||||  ||||||||||||||||||| ||||| ||||||||||||||||||    
T  17459695 atgatctaaaattattgttaatgaaagggtgtgccaaaaggaaacgaaaattatgtattgggattaattttgacaatgatttgagttgaa 17459784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 18774142 - 18774231
Alignment:
Q  14 atgaactaaaaatattgttaatgaaaggatgtgccaaaaggaaataaaaattatgtattgggatttattttaacaatgatttgagttgaa 103  Q
    |||||||||||||||||||||||||||| |||||||| | ||||  ||||||||||||||||||| ||||| ||||||||||||||||||    
T  18774142 atgaactaaaaatattgttaatgaaagggtgtgccaacaagaaacgaaaattatgtattgggattaattttgacaatgatttgagttgaa 18774231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 266
Target Start/End: Original strand, 20135328 - 20135419
Alignment:
Q  175 gggcctggttgtgagcttacggagtccccgttcatgcttggaatgaagtgtttttcaggttgtgtgtgaagggagttggacggtttattcat 266  Q
    |||| |||||| ||| |||||| || ||| | |||||||||||||| |  || |||||| ||||||||||  | ||||||||||||||||||    
T  20135328 gggcttggttgcgagtttacggtgttcccatacatgcttggaatgatgatttcttcaggatgtgtgtgaatcgtgttggacggtttattcat 20135419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 18775140 - 18775177
Alignment:
Q  99 ttgaattgaagcacttgtgtcatggacaattatgccct 136  Q
    |||||||||||||||||||||||||||||  |||||||    
T  18775140 ttgaattgaagcacttgtgtcatggacaaccatgccct 18775177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 21299234 - 21299323
Alignment:
Q  14 atgaactaaaaatattgttaatgaaaggatgtgccaaaaggaaataaaaattatgtattgggatttattttaacaatgatttgagttgaa 103  Q
    |||||||||||||||||||||||||||| |||||||| | ||||  ||||||||||||||||||| ||||| ||||||||||||||||||    
T  21299234 atgaactaaaaatattgttaatgaaagggtgtgccaacaagaaacgaaaattatgtattgggattaattttgacaatgatttgagttgaa 21299323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 9344310 - 9344249
Alignment:
Q  41 gatgtgccaaaaggaaataaaaattatgtattgggatttattttaacaatgatttgagttgaa 103  Q
    ||||||||||||| |||  ||||||||||||| ||||| ||||| || |||||||||||||||    
T  9344310 gatgtgccaaaag-aaacgaaaattatgtattaggattgattttgacgatgatttgagttgaa 9344249  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 12638830 - 12638793
Alignment:
Q  99 ttgaattgaagcacttgtgtcatggacaattatgccct 136  Q
    |||||||||||||||||||||||||||||  |||||||    
T  12638830 ttgaattgaagcacttgtgtcatggacaaccatgccct 12638793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 21302617 - 21302654
Alignment:
Q  99 ttgaattgaagcacttgtgtcatggacaattatgccct 136  Q
    |||||||||||||||||||||||||||||  |||||||    
T  21302617 ttgaattgaagcacttgtgtcatggacaaccatgccct 21302654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 22821135 - 22821224
Alignment:
Q  14 atgaactaaaaatattgttaatgaaaggatgtgccaaaaggaaataaaaattatgtattgggatttattttaacaatgatttgagttgaa 103  Q
    |||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||| |||||  |||||| ||||||||||    
T  22821135 atgaactaaaaatattgttaatgaaagggtgtgccaaaaggaaacgaaaattatgtattgggattaattttggcaatgaattgagttgaa 22821224  T

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Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 22825867 - 22825904
Alignment:
Q  99 ttgaattgaagcacttgtgtcatggacaattatgccct 136  Q
    |||||||||||||||||||||||||||||  |||||||    
T  22825867 ttgaattgaagcacttgtgtcatggacaaccatgccct 22825904  T

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Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 37260644 - 37260555
Alignment:
Q  14 atgaactaaaaatattgttaatgaaaggatgtgccaaaaggaaataaaaattatgtattgggatttattttaacaatgatttgagttgaa 103  Q
    |||||||||||||||||| ||||||||| |||||||||| ||||  ||||||||||||||||||| ||||| ||||||||||||||||||    
T  37260644 atgaactaaaaatattgtcaatgaaagggtgtgccaaaaagaaacgaaaattatgtattgggattaattttgacaatgatttgagttgaa 37260555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 127
Target Start/End: Complemental strand, 37259649 - 37259621
Alignment:
Q  99 ttgaattgaagcacttgtgtcatggacaa 127  Q
    |||||||||||||||||||||||||||||    
T  37259649 ttgaattgaagcacttgtgtcatggacaa 37259621  T

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Target: scaffold0671 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 2361 - 2272
Alignment:
Q  14 atgaactaaaaatattgttaatgaaaggatgtgccaaaaggaaataaaaattatgtattgggatttattttaacaatgatttgagttgaa 103  Q
    |||||||||||||||||||||||||| | |||||||||| ||||  ||||| ||||||||||||| ||||| ||||||||||||||||||    
T  2361 atgaactaaaaatattgttaatgaaaaggtgtgccaaaaagaaacgaaaatcatgtattgggattaattttgacaatgatttgagttgaa 2272  T

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Target: scaffold0671; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 127
Target Start/End: Complemental strand, 1255 - 1227
Alignment:
Q  99 ttgaattgaagcacttgtgtcatggacaa 127  Q
    |||||||||||||||||||||||||||||    
T  1255 ttgaattgaagcacttgtgtcatggacaa 1227  T

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Target: scaffold0065 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 33618 - 33707
Alignment:
Q  14 atgaactaaaaatattgttaatgaaaggatgtgccaaaaggaaataaaaattatgtattgggatttattttaacaatgatttgagttgaa 103  Q
    ||||||||||| |||||||||||||||| |||||||||||||||  ||||||||| |||||||||  |||| ||||||||||||||||||    
T  33618 atgaactaaaattattgttaatgaaagggtgtgccaaaaggaaacgaaaattatgcattgggattatttttgacaatgatttgagttgaa 33707  T

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Target: scaffold0002 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 127263 - 127181
Alignment:
Q  14 atgaactaaaaatattgttaatgaaaggatgtgccaaaaggaaataaaaattatgtattgggatttattttaacaatgatttg 96  Q
    |||||||||||||||||||||||||||| |||||||| | ||||  ||||||||||||||||||| ||||| |||||||||||    
T  127263 atgaactaaaaatattgttaatgaaagggtgtgccaacaagaaacgaaaattatgtattgggattaattttgacaatgatttg 127181  T

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Target: scaffold0512 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 4 - 41
Alignment:
Q  99 ttgaattgaagcacttgtgtcatggacaattatgccct 136  Q
    |||||||||||||||||||||||||||||  |||||||    
T  4 ttgaattgaagcacttgtgtcatggacaaccatgccct 41  T

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