View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16569_low_28 (Length: 462)

Name: NF16569_low_28
Description: NF16569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16569_low_28
NF16569_low_28
[»] chr2 (42 HSPs)
chr2 (1-275)||(1191596-1191871)
chr2 (361-448)||(1191969-1192059)
chr2 (1-98)||(35171883-35171981)
chr2 (8-95)||(44976172-44976261)
chr2 (1-92)||(24196087-24196177)
chr2 (1-96)||(34516432-34516527)
chr2 (1-96)||(15038042-15038138)
chr2 (1-97)||(17324849-17324945)
chr2 (1-96)||(44946071-44946167)
chr2 (11-96)||(11941228-11941314)
chr2 (10-96)||(13266582-13266668)
chr2 (11-95)||(4769259-4769344)
chr2 (8-96)||(33827591-33827680)
chr2 (1-96)||(27269362-27269458)
chr2 (1-96)||(30466848-30466944)
chr2 (1-96)||(36242330-36242426)
chr2 (1-92)||(10582014-10582104)
chr2 (1-95)||(41314075-41314169)
chr2 (1-89)||(3943823-3943912)
chr2 (1-118)||(19054108-19054227)
chr2 (1-92)||(28668956-28669048)
chr2 (8-95)||(45271474-45271562)
chr2 (37-96)||(4852649-4852708)
chr2 (1-95)||(714144-714239)
chr2 (13-92)||(2140508-2140589)
chr2 (8-89)||(5394107-5394189)
chr2 (48-96)||(18976473-18976521)
chr2 (1-45)||(27290671-27290715)
chr2 (48-96)||(44929864-44929912)
chr2 (10-96)||(19849925-19850012)
chr2 (29-96)||(25293269-25293338)
chr2 (14-85)||(19174858-19174930)
chr2 (1-71)||(4567480-4567551)
chr2 (49-96)||(6714313-6714360)
chr2 (1-66)||(23787056-23787122)
chr2 (8-109)||(41329933-41330034)
chr2 (1-96)||(43374348-43374439)
chr2 (26-79)||(13599360-13599413)
chr2 (8-45)||(19517032-19517069)
chr2 (48-96)||(18692091-18692139)
chr2 (33-85)||(29361664-29361716)
chr2 (36-95)||(32845194-32845254)
[»] chr5 (46 HSPs)
chr5 (1-96)||(19456229-19456324)
chr5 (1-97)||(15641122-15641219)
chr5 (1-96)||(38684291-38684386)
chr5 (1-98)||(7085642-7085740)
chr5 (1-96)||(8484679-8484775)
chr5 (8-96)||(11464926-11465014)
chr5 (1-96)||(27498749-27498845)
chr5 (1-96)||(30485911-30486007)
chr5 (10-96)||(5049229-5049315)
chr5 (1-96)||(11926519-11926616)
chr5 (1-118)||(35425096-35425214)
chr5 (1-89)||(32059465-32059554)
chr5 (1-96)||(18207290-18207386)
chr5 (1-96)||(23270540-23270636)
chr5 (8-89)||(4603867-4603949)
chr5 (8-96)||(34310232-34310321)
chr5 (1-96)||(6014298-6014394)
chr5 (8-98)||(21236378-21236469)
chr5 (8-94)||(34049901-34049988)
chr5 (21-96)||(41351122-41351197)
chr5 (1-96)||(27487572-27487669)
chr5 (12-96)||(19145430-19145515)
chr5 (1-96)||(9659329-9659425)
chr5 (1-96)||(10869583-10869679)
chr5 (33-96)||(13038473-13038537)
chr5 (27-107)||(21042581-21042661)
chr5 (8-105)||(10399863-10399962)
chr5 (1-96)||(42193568-42193662)
chr5 (31-96)||(13108468-13108534)
chr5 (1-118)||(31287942-31288060)
chr5 (61-118)||(15971085-15971142)
chr5 (11-92)||(28614508-28614589)
chr5 (1-96)||(33709521-33709615)
chr5 (1-96)||(12398466-12398562)
chr5 (9-96)||(36954909-36954997)
chr5 (27-92)||(22392797-22392863)
chr5 (1-85)||(15971151-15971236)
chr5 (8-98)||(26009280-26009371)
chr5 (8-96)||(37495137-37495233)
chr5 (8-109)||(10813856-10813958)
chr5 (11-96)||(13659263-13659349)
chr5 (1-43)||(25587015-25587057)
chr5 (48-96)||(22693066-22693114)
chr5 (47-98)||(3639900-3639951)
chr5 (47-96)||(5067391-5067440)
chr5 (48-96)||(38630997-38631045)
[»] scaffold0623 (1 HSPs)
scaffold0623 (1-97)||(1073-1170)
[»] scaffold0366 (2 HSPs)
scaffold0366 (1-97)||(9316-9413)
scaffold0366 (1-97)||(12018-12114)
[»] scaffold0459 (1 HSPs)
scaffold0459 (1-97)||(10711-10807)
[»] chr8 (47 HSPs)
chr8 (1-96)||(15259424-15259520)
chr8 (1-96)||(39349343-39349439)
chr8 (1-96)||(4718732-4718828)
chr8 (1-96)||(42328091-42328187)
chr8 (8-96)||(2618280-2618369)
chr8 (8-96)||(8765544-8765633)
chr8 (1-96)||(21603317-21603413)
chr8 (1-97)||(25248436-25248531)
chr8 (1-96)||(34237673-34237769)
chr8 (8-96)||(20306002-20306091)
chr8 (8-96)||(21092635-21092724)
chr8 (1-96)||(3734641-3734737)
chr8 (1-96)||(28193561-28193657)
chr8 (1-96)||(264418-264513)
chr8 (1-96)||(651408-651503)
chr8 (1-96)||(837143-837238)
chr8 (9-96)||(19471704-19471793)
chr8 (9-96)||(19542628-19542717)
chr8 (9-96)||(19589979-19590068)
chr8 (1-96)||(27746353-27746449)
chr8 (1-96)||(34610705-34610801)
chr8 (1-96)||(42643136-42643232)
chr8 (1-109)||(6953013-6953121)
chr8 (31-92)||(7557973-7558034)
chr8 (25-96)||(2639429-2639501)
chr8 (1-96)||(28088373-28088469)
chr8 (1-96)||(32879366-32879462)
chr8 (5-92)||(2166788-2166875)
chr8 (1-95)||(21667637-21667731)
chr8 (1-93)||(4698744-4698837)
chr8 (1-96)||(14633041-14633137)
chr8 (8-96)||(24018476-24018566)
chr8 (1-95)||(28964120-28964214)
chr8 (8-92)||(20470011-20470095)
chr8 (1-89)||(36848775-36848863)
chr8 (13-96)||(43817767-43817851)
chr8 (8-118)||(1219443-1219554)
chr8 (8-109)||(10292149-10292250)
chr8 (33-95)||(12312965-12313027)
chr8 (1-65)||(18532194-18532259)
chr8 (26-109)||(18128625-18128709)
chr8 (8-71)||(24999328-24999392)
chr8 (12-89)||(28908920-28908999)
chr8 (10-119)||(9047274-9047383)
chr8 (18-59)||(42332067-42332108)
chr8 (48-96)||(33747017-33747065)
chr8 (11-98)||(34639224-34639312)
[»] chr4 (51 HSPs)
chr4 (1-96)||(5609220-5609316)
chr4 (8-96)||(45787722-45787811)
chr4 (1-96)||(34844776-34844872)
chr4 (1-96)||(40058870-40058966)
chr4 (8-98)||(44343604-44343695)
chr4 (8-96)||(52983709-52983798)
chr4 (1-118)||(55961750-55961867)
chr4 (1-96)||(19660550-19660646)
chr4 (1-96)||(32990518-32990614)
chr4 (1-96)||(27528813-27528909)
chr4 (1-96)||(54127360-54127456)
chr4 (1-98)||(46714476-46714574)
chr4 (1-118)||(18875513-18875630)
chr4 (1-96)||(20078002-20078098)
chr4 (1-96)||(20566433-20566529)
chr4 (1-96)||(32986280-32986376)
chr4 (1-96)||(34723882-34723978)
chr4 (1-92)||(13873317-13873409)
chr4 (1-96)||(32942453-32942549)
chr4 (1-96)||(33696297-33696393)
chr4 (11-95)||(51535710-51535799)
chr4 (8-98)||(13584270-13584361)
chr4 (15-118)||(30879162-30879265)
chr4 (1-96)||(49287941-49288036)
chr4 (12-98)||(25969519-25969604)
chr4 (1-96)||(35229250-35229347)
chr4 (8-96)||(9517659-9517748)
chr4 (8-96)||(12824490-12824579)
chr4 (1-89)||(22488053-22488142)
chr4 (27-118)||(4912035-4912127)
chr4 (11-95)||(7391984-7392068)
chr4 (1-109)||(25852297-25852407)
chr4 (26-87)||(40307648-40307709)
chr4 (11-111)||(47464111-47464212)
chr4 (1-96)||(13550291-13550387)
chr4 (1-96)||(27574401-27574497)
chr4 (1-64)||(33992709-33992773)
chr4 (1-64)||(35674791-35674855)
chr4 (1-92)||(36131532-36131624)
chr4 (36-98)||(10143779-10143841)
chr4 (8-109)||(12500064-12500165)
chr4 (8-92)||(21387509-21387592)
chr4 (27-96)||(51595131-51595201)
chr4 (8-96)||(1985926-1986014)
chr4 (51-96)||(23639758-23639803)
chr4 (51-96)||(23645416-23645461)
chr4 (1-109)||(20527039-20527147)
chr4 (52-96)||(52494623-52494667)
chr4 (50-91)||(51961993-51962034)
chr4 (27-95)||(4585732-4585799)
chr4 (2-96)||(13771500-13771596)
[»] chr3 (56 HSPs)
chr3 (1-96)||(10190760-10190856)
chr3 (1-96)||(40133467-40133563)
chr3 (1-98)||(29915286-29915383)
chr3 (1-98)||(29964439-29964536)
chr3 (1-96)||(10083837-10083933)
chr3 (12-96)||(24165733-24165817)
chr3 (1-96)||(35492994-35493090)
chr3 (1-96)||(15566518-15566613)
chr3 (9-96)||(52821654-52821741)
chr3 (1-96)||(53424195-53424290)
chr3 (1-98)||(8456166-8456264)
chr3 (1-97)||(53233927-53234024)
chr3 (1-96)||(21363026-21363122)
chr3 (1-96)||(25289733-25289828)
chr3 (1-96)||(49258280-49258376)
chr3 (8-97)||(45529771-45529861)
chr3 (8-96)||(8097297-8097386)
chr3 (8-96)||(25379851-25379940)
chr3 (10-118)||(30257716-30257825)
chr3 (1-96)||(18176905-18177001)
chr3 (1-96)||(32151507-32151603)
chr3 (8-96)||(46576438-46576527)
chr3 (1-89)||(48977471-48977560)
chr3 (8-96)||(4462723-4462811)
chr3 (1-96)||(26174196-26174292)
chr3 (1-96)||(39041870-39041966)
chr3 (1-96)||(45272434-45272530)
chr3 (8-78)||(1242063-1242134)
chr3 (14-96)||(33398486-33398569)
chr3 (1-96)||(30807171-30807267)
chr3 (1-118)||(51532872-51532990)
chr3 (8-96)||(31537856-31537945)
chr3 (14-109)||(54475777-54475873)
chr3 (1-92)||(53288735-53288826)
chr3 (1-98)||(2511313-2511411)
chr3 (1-79)||(7470251-7470329)
chr3 (1-118)||(40940908-40941026)
chr3 (8-96)||(34492593-34492682)
chr3 (8-96)||(14343307-14343395)
chr3 (1-96)||(24407344-24407440)
chr3 (15-94)||(33698726-33698806)
chr3 (1-59)||(26108375-26108434)
chr3 (10-95)||(25344077-25344162)
chr3 (8-96)||(52455667-52455756)
chr3 (20-89)||(6127555-6127625)
chr3 (1-98)||(1692917-1693014)
chr3 (8-118)||(8958031-8958143)
chr3 (50-98)||(19857184-19857232)
chr3 (11-98)||(48972730-48972815)
chr3 (48-96)||(53848452-53848500)
chr3 (8-92)||(17579157-17579243)
chr3 (12-96)||(1178265-1178349)
chr3 (48-89)||(26158942-26158983)
chr3 (17-89)||(34844476-34844549)
chr3 (52-96)||(4048085-4048129)
chr3 (48-96)||(4252414-4252462)
[»] chr7 (47 HSPs)
chr7 (1-95)||(29861757-29861852)
chr7 (1-97)||(10091275-10091372)
chr7 (1-96)||(3851844-3851940)
chr7 (9-96)||(17196968-17197056)
chr7 (1-96)||(21835238-21835334)
chr7 (1-96)||(22119975-22120071)
chr7 (1-96)||(40542928-40543024)
chr7 (1-96)||(654723-654818)
chr7 (1-107)||(39145659-39145766)
chr7 (8-118)||(31274008-31274118)
chr7 (1-93)||(23092183-23092276)
chr7 (1-96)||(2751358-2751454)
chr7 (1-96)||(7175880-7175976)
chr7 (1-96)||(7275364-7275460)
chr7 (1-96)||(11997936-11998032)
chr7 (1-96)||(27009446-27009543)
chr7 (1-96)||(18044194-18044290)
chr7 (1-95)||(22703573-22703668)
chr7 (8-95)||(33137844-33137931)
chr7 (1-96)||(16374081-16374177)
chr7 (1-96)||(21217851-21217947)
chr7 (21-96)||(22638395-22638471)
chr7 (1-109)||(27704089-27704197)
chr7 (1-95)||(22643361-22643456)
chr7 (8-109)||(19421325-19421427)
chr7 (1-93)||(2103142-2103234)
chr7 (1-93)||(23012529-23012622)
chr7 (11-95)||(42913532-42913617)
chr7 (1-96)||(17212140-17212236)
chr7 (8-98)||(9718003-9718094)
chr7 (1-91)||(21373797-21373888)
chr7 (1-95)||(36772322-36772417)
chr7 (11-96)||(31197687-31197773)
chr7 (10-92)||(43785321-43785404)
chr7 (1-96)||(28089903-28090002)
chr7 (12-96)||(27312250-27312335)
chr7 (8-96)||(41907532-41907620)
chr7 (1-96)||(9683913-9684009)
chr7 (1-96)||(28950958-28951054)
chr7 (1-64)||(13332475-13332537)
chr7 (11-96)||(31712920-31713006)
chr7 (15-96)||(8943419-8943502)
chr7 (8-59)||(14199722-14199773)
chr7 (8-89)||(2344393-2344475)
chr7 (53-98)||(11909970-11910015)
chr7 (8-52)||(6491701-6491745)
chr7 (48-96)||(25333538-25333586)
[»] chr6 (25 HSPs)
chr6 (1-96)||(3222654-3222749)
chr6 (1-98)||(11448954-11449052)
chr6 (8-98)||(21148527-21148617)
chr6 (1-92)||(654168-654260)
chr6 (1-96)||(9690656-9690752)
chr6 (1-96)||(15360116-15360212)
chr6 (1-96)||(34147429-34147525)
chr6 (1-96)||(34160045-34160141)
chr6 (1-92)||(12390508-12390600)
chr6 (1-95)||(5360090-5360185)
chr6 (8-96)||(1345025-1345114)
chr6 (8-96)||(21982339-21982427)
chr6 (1-118)||(17081050-17081168)
chr6 (8-109)||(28672157-28672259)
chr6 (1-96)||(9239058-9239154)
chr6 (1-95)||(11007248-11007343)
chr6 (1-92)||(11840984-11841075)
chr6 (11-96)||(14504100-14504187)
chr6 (12-109)||(17149461-17149560)
chr6 (11-96)||(9844031-9844117)
chr6 (52-96)||(33718487-33718531)
chr6 (47-85)||(3418940-3418978)
chr6 (8-45)||(12591727-12591764)
chr6 (12-109)||(9208345-9208444)
chr6 (49-105)||(27866212-27866268)
[»] chr1 (42 HSPs)
chr1 (1-96)||(4621255-4621351)
chr1 (1-96)||(15059420-15059516)
chr1 (1-96)||(24122106-24122202)
chr1 (1-96)||(24674476-24674572)
chr1 (1-98)||(7766743-7766841)
chr1 (1-98)||(8254768-8254866)
chr1 (1-98)||(18646936-18647034)
chr1 (1-96)||(17935852-17935948)
chr1 (1-95)||(1378981-1379075)
chr1 (1-98)||(23734199-23734298)
chr1 (1-98)||(23741391-23741490)
chr1 (1-98)||(45331637-45331736)
chr1 (1-95)||(33905529-33905624)
chr1 (15-96)||(34778436-34778518)
chr1 (1-81)||(8077730-8077811)
chr1 (12-109)||(40802074-40802171)
chr1 (1-89)||(46607893-46607982)
chr1 (1-96)||(9500373-9500469)
chr1 (9-96)||(27454882-27454972)
chr1 (8-95)||(32930839-32930927)
chr1 (12-89)||(32729638-32729716)
chr1 (13-85)||(12876965-12877038)
chr1 (1-96)||(30677259-30677355)
chr1 (1-95)||(8779755-8779850)
chr1 (11-96)||(26820280-26820366)
chr1 (1-92)||(7578492-7578584)
chr1 (8-94)||(2272434-2272521)
chr1 (11-93)||(7197268-7197351)
chr1 (18-109)||(26513153-26513244)
chr1 (19-96)||(48699859-48699938)
chr1 (1-59)||(7946927-7946985)
chr1 (50-96)||(23041655-23041701)
chr1 (33-97)||(50202661-50202726)
chr1 (29-89)||(37351478-37351538)
chr1 (12-89)||(25237014-25237093)
chr1 (10-95)||(18533743-18533829)
chr1 (11-96)||(21726822-21726908)
chr1 (22-91)||(22909975-22910045)
chr1 (37-91)||(27159205-27159259)
chr1 (12-96)||(16539701-16539786)
chr1 (1-96)||(36155906-36156002)
chr1 (1-92)||(45859065-45859157)
[»] scaffold0576 (1 HSPs)
scaffold0576 (1-96)||(5100-5196)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-96)||(7327-7423)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-118)||(161892-162010)
[»] scaffold0070 (1 HSPs)
scaffold0070 (1-96)||(40408-40503)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-118)||(39175-39293)
[»] scaffold1175 (1 HSPs)
scaffold1175 (8-88)||(2452-2533)
[»] scaffold0068 (1 HSPs)
scaffold0068 (9-97)||(41661-41750)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-97)||(32371-32468)
[»] scaffold0051 (1 HSPs)
scaffold0051 (1-98)||(52887-52985)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-89)||(97391-97480)
[»] scaffold0328 (2 HSPs)
scaffold0328 (1-96)||(13065-13158)
scaffold0328 (1-96)||(15074-15169)
[»] scaffold0717 (1 HSPs)
scaffold0717 (8-51)||(22-65)
[»] scaffold0049 (1 HSPs)
scaffold0049 (27-89)||(66863-66926)
[»] scaffold0157 (1 HSPs)
scaffold0157 (8-109)||(20312-20413)
[»] scaffold0160 (1 HSPs)
scaffold0160 (11-88)||(29169-29247)


Alignment Details
Target: chr2 (Bit Score: 186; Significance: 1e-100; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 1191596 - 1191871
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaac 99  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| |||||||||||||||||||||||| ||    
T  1191596 ttcggtgggctaagtccatacagagtttgctctggctttaaacggtgtccccgaaagtgaacggtggaattgttcccctcgaattagtcgattcttggac 1191695  T
Q  100 caaataccgaatcttcaaacnnnnnnnnn-ctatgtcctttcagtcatatgttccatgtatctatccaatccgcttttccatatgagccgcattatcctc 198  Q
    | |||||||||| |||||||          ||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  1191696 cgaataccgaattttcaaacaaaaaaaaaactatgtcctttcagttatatgttccatgtatctatccaatacacttttccatatgagccgcattatcctc 1191795  T
Q  199 ctcggtaatctcatcatctcctgccggctccgtcacttcagaacttcccacaactattcatcttctttattctcctc 275  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1191796 ctcggtaatctcatcatctcctgccggctccg-cacttcagaacttcccacaactattcatcttctttattctcctc 1191871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 361 - 448
Target Start/End: Original strand, 1191969 - 1192059
Alignment:
Q  361 taataaacataattttttgtatattcttcttcttcatcatcat---catcttattcttcaaagttcaaatccataaaaataggaaatatat 448  Q
    |||||||||||||||||||||||||| ||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  1191969 taataaacataattttttgtatattcatcttcttcatcatcatgatcatcttattcttcaaagttcaaatccataaaaataggaaatatat 1192059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 35171883 - 35171981
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||| |||| |||||||| |||||||||||||||||    
T  35171883 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaa 35171981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 44976261 - 44976172
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtg--ccccgcaagtggacggtggaattgatcccctcgaattagtcgattctt 95  Q
    |||||||||||||||||||||||||||||||||||||| |  |||||||||||| |||||| ||||||||| ||| ||||||||||||||    
T  44976261 ggctaagtccatacagagtttgctctggctttaaacggggctccccgcaagtgggcggtgggattgatcccttcggattagtcgattctt 44976172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 24196087 - 24196177
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgatt 92  Q
    |||||| |||||||||||||||||  ||||||||||||||||||| ||||||||||||| |||||| |||| |||||||| |||||||||||    
T  24196087 ttcggtgggctaagtccatacagaacttgctctggctttaaacgg-gccccgcaagtgggcggtgggattggtcccctcggattagtcgatt 24196177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 34516527 - 34516432
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||| |||||||||||  ||| |||||||| |||||| |||| |||||||| |||||||||||||||    
T  34516527 ttcggtgggctaagtccatacagagcttgctctcgctttaaacgggcccctgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 34516432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 15038042 - 15038138
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||| ||||||||||||| | |||||||||||| |||||| |||| |||||||  |||||||||||||||    
T  15038042 ttcggtgggctaagtccatacagagcttgctttggctttaaacggagcccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttg 15038138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 17324849 - 17324945
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttga 97  Q
    |||||| |||||||||||||||||| |||||||||||||||| ||  |||| ||||||| |||||| |||  ||||||| |||||||||||||||||    
T  17324849 ttcggtgggctaagtccatacagagcttgctctggctttaaatgggcccccacaagtgggcggtgggattagtcccctcaaattagtcgattcttga 17324945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 44946167 - 44946071
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||  |||||||||||||||||||  |||| |||||||| |||||| |||| |||||||| |||||||||||||||    
T  44946167 ttcggtgggctaagtccatacagaacttgctctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 44946071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 11941314 - 11941228
Alignment:
Q  11 taagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||||||||||| |||||||||||||||||||  |||| |||||||| |||||| |||| |||||||| |||||||||||||||    
T  11941314 taagtccatacagagcttgctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 11941228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 13266582 - 13266668
Alignment:
Q  10 ctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||    ||| |||| ||||||| ||||||||||||||||    
T  13266582 ctaagtccatacagagcttgctctggctttaaacggggccccgcaagtgggtaatgggattggtcccctcaaattagtcgattcttg 13266668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 4769259 - 4769344
Alignment:
Q  11 taagtccatacagagtttgctctggctttaaac-ggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattctt 95  Q
    ||||||||||||||| ||||||||||||||||| || |||||||||||||||||||   ||| ||||||| |||||||||||||||    
T  4769259 taagtccatacagagcttgctctggctttaaacgggggccccgcaagtggacggtgaggttggtcccctcaaattagtcgattctt 4769344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 33827680 - 33827591
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||||||||| |||||||||||||||||||  |||| |||||||| |||||| |||| |||||| | |||||||||||||||    
T  33827680 ggctaagtccatacagagcttgctctggctttaaacgggacccctgcaagtgggcggtgggattggtccccttggattagtcgattcttg 33827591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 27269458 - 27269362
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgc-cccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| ||||||||||||| |||  ||||||||||||||||| |  | ||||||||||| |||||| ||||||||||||| |||||||||||||||    
T  27269458 ttcggtgggctaagtccatatagaacttgctctggctttaaacagccctcccgcaagtgggcggtgggattgatcccctcggattagtcgattcttg 27269362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 30466944 - 30466848
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaa-cggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| |||||||||||||||| |||  |||||||||||| | |||| |||| |||| ||| |||||||||||||||    
T  30466944 ttcggtgggctaagtccatacagagcttgctctggctttaaaccgggcccccgcaagtgggcagtgggattggtcccttcggattagtcgattcttg 30466848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 36242426 - 36242330
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||  ||||| ||||||||||||||||||| | |||||||||||| |||||| |||| |||||||| |||| ||||||||||    
T  36242426 ttcggtgggctaagtccagccagagcttgctctggctttaaacggggtccccgcaagtgggcggtgggattggtcccctcggattaatcgattcttg 36242330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 10582104 - 10582014
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgatt 92  Q
    |||||| |||||||||||||||||| ||||||| |||||||||||  || ||||||||| | |||| |||| ||||||||||||||||||||    
T  10582104 ttcggtgggctaagtccatacagagcttgctctagctttaaacgggccctcgcaagtgggc-gtgggattggtcccctcgaattagtcgatt 10582014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 41314075 - 41314169
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattctt 95  Q
    |||||| ||||||||| |||||||| |||||||| ||||||||||   |||||||||||||||||| |||| |||||||  |||| |||||||||    
T  41314075 ttcggtgggctaagtctatacagagcttgctctgactttaaacgggatcccgcaagtggacggtgggattggtcccctcagattaatcgattctt 41314169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 3943823 - 3943912
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgc-cccgcaagtggacggtggaattgatcccctcgaattagtcg 89  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| || |||||||||||  ||||| |||| |||||| | ||||||||    
T  3943823 ttcggttggctaagtccatacagagcttgctctggctttaaacggggctcccgcaagtgggtggtgggattggtccccttggattagtcg 3943912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 19054108 - 19054227
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacgg--tgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    |||||| |||||||||||||||||| ||||| |||||||||| ||    |||||||||||| |||||| |||| ||| |||| ||||||||||||||| |    
T  19054108 ttcggtgggctaagtccatacagagcttgctttggctttaaatggaaccccccgcaagtgggcggtgggattggtccgctcggattagtcgattcttgga 19054207  T
Q  99 ccaaataccgaatcttcaaa 118  Q
     || ||||||| | ||||||    
T  19054208 tcagataccgagttttcaaa 19054227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 28668956 - 28669048
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgatt 92  Q
    |||||| | |||||||||||||||| ||||| ||||||||||||| | |||| ||||||| |||||| |||| |||||||| |||||||||||    
T  28668956 ttcggtggactaagtccatacagagcttgctttggctttaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcgatt 28669048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 45271474 - 45271562
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattctt 95  Q
    |||||||||||||||||| ||||||||||||||||||  ||||| |||||||  ||| |  |||||||||||| |||||||||||||||    
T  45271474 ggctaagtccatacagagcttgctctggctttaaacgaagcccctgcaagtgagcggagagattgatcccctcaaattagtcgattctt 45271562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 4852649 - 4852708
Alignment:
Q  37 tttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| |||| ||||||||||    
T  4852649 tttaaacggggccccgcaagtggacggtggaattggtcccctcggattaatcgattcttg 4852708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 714239 - 714144
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattctt 95  Q
    |||||| ||||||||||||| ||||||||||||| |||||||||| | |||||||| ||| ||||||  ||  |||||||  ||||||||||||||    
T  714239 ttcggtgggctaagtccatagagagtttgctctgactttaaacggagcccccgcaaatgggcggtgggtttcgtcccctcagattagtcgattctt 714144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 2140589 - 2140508
Alignment:
Q  13 agtccatacagagtttgctctggctttaaacgg--tgccccgcaagtggacggtggaattgatcccctcgaattagtcgatt 92  Q
    ||||||||||||| |||||||||||||||| ||    |||||||||||| |||||| |||| |||||||| |||||||||||    
T  2140589 agtccatacagagcttgctctggctttaaatgggcccccccgcaagtgggcggtgggattggtcccctcggattagtcgatt 2140508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 5394107 - 5394189
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtgcc-ccgcaagtggacggtggaattgatcccctcgaattagtcg 89  Q
    ||||||||||||||||||||||||||| ||||||| || ||| |||||||||| |||||| |||| |||  ||| ||||||||    
T  5394107 ggctaagtccatacagagtttgctctgactttaaatggggccgccgcaagtgggcggtgggattggtccgttcggattagtcg 5394189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 18976521 - 18976473
Alignment:
Q  48 ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||| |||||| |||| ||||||||||||||||||||||||    
T  18976521 ccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttg 18976473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27290671 - 27290715
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacgg 45  Q
    |||||| |||||||||||||||||| |||||||||||||||||||    
T  27290671 ttcggtgggctaagtccatacagagcttgctctggctttaaacgg 27290715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 44929912 - 44929864
Alignment:
Q  48 ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||||||||||||||| |||| |||||| |||||||||||||||||    
T  44929912 ccccgcaagtggacggtgggattggtccccttgaattagtcgattcttg 44929864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 19849925 - 19850012
Alignment:
Q  10 ctaagtccatacagagtttgctctggctttaaac-ggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||| |||||||| ||||||||||||||||| ||  |||||||||||| |||||  |||| ||| ||| ||||| ||||||||||    
T  19849925 ctaagtctatacagagcttgctctggctttaaacagggcccccgcaagtgggcggtgagattggtcctctcaaattaatcgattcttg 19850012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 25293269 - 25293338
Alignment:
Q  29 gctctggctttaaacggtgcccc--gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||||||||||||| |||||  |||||||| || ||| |||| |||||||| |||||||||||||||    
T  25293269 gctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcggattagtcgattcttg 25293338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 19174858 - 19174930
Alignment:
Q  14 gtccatacagag-tttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaatta 85  Q
    |||||||||||| |||||||||||||  ||||| |||||| || ||| |||||| ||||||||||||| ||||    
T  19174858 gtccatacagagctttgctctggcttagaacggagccccgtaaatgggcggtgggattgatcccctcggatta 19174930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 4567551 - 4567480
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattg 71  Q
    |||||| |||||| ||||||||||| ||| ||||||||||||||| | |||| ||||||| |||||| ||||    
T  4567551 ttcggtgggctaaatccatacagagcttgttctggctttaaacggggcccccacaagtgggcggtgggattg 4567480  T

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Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 6714360 - 6714313
Alignment:
Q  49 cccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||||||||  |||| ||||||| ||||||||||||||||    
T  6714360 cccgcaagtggacggtgagattggtcccctcaaattagtcgattcttg 6714313  T

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Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 23787122 - 23787056
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcc-ccgcaagtggacggtgg 66  Q
    |||||| |||||| |||||||||||||||||||| ||||||| ||  || |||||||||| ||||||    
T  23787122 ttcggtgggctaaatccatacagagtttgctctgactttaaatgggacctccgcaagtgggcggtgg 23787056  T

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Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 41329933 - 41330034
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaaccaaatac 106  Q
    ||||||||||||| |||| |||||||||||||||| || | |||| ||||||| |||||  |||| |||||||  |||||||| |||||| |||  ||||    
T  41329933 ggctaagtccata-agagcttgctctggctttaaatggggcccccacaagtgggcggtgagattggtcccctcagattagtcggttcttggaccggatac 41330031  T
Q  107 cga 109  Q
    |||    
T  41330032 cga 41330034  T

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Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 43374439 - 43374348
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| ||||||||  ||||| || ||||||||||||||| |    |||||||||||  |||||| |||| |||| ||| |||||||||||||||    
T  43374439 ttcggtgggctaagtttatacaaagcttgctctggctttaagc----ccccgcaagtgagcggtgggattggtcccttcggattagtcgattcttg 43374348  T

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Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 13599413 - 13599360
Alignment:
Q  26 tttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctc 79  Q
    ||||||||| |||  ||||| |||||||||||||||||||  ||||||||||||    
T  13599413 tttgctctgacttagaacggggccccgcaagtggacggtgagattgatcccctc 13599360  T

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Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 19517032 - 19517069
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacgg 45  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  19517032 ggctaagtccatacagagcttgctttggctttaaacgg 19517069  T

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Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 18692091 - 18692139
Alignment:
Q  48 ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||| ||||||| |||||| |||| |||||||| |||||||||||||||    
T  18692091 ccccacaagtgggcggtgggattggtcccctcgtattagtcgattcttg 18692139  T

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Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 29361664 - 29361716
Alignment:
Q  33 tggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaatta 85  Q
    ||||||||||||| ||||||||||||| | |||| ||||||| ||||| ||||    
T  29361664 tggctttaaacggagccccgcaagtgggcagtgggattgatctcctcggatta 29361716  T

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Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 32845194 - 32845254
Alignment:
Q  36 ctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattctt 95  Q
    |||||||| | ||||| |||||||| |||||| |||| |||| ||||||||||||||||||    
T  32845194 ctttaaacagggcccctgcaagtgggcggtgggattggtcccttcgaattagtcgattctt 32845254  T

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Target: chr5 (Bit Score: 68; Significance: 3e-30; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 19456324 - 19456229
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||| |||| |||||||| |||||||||||||||    
T  19456324 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 19456229  T

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Target: chr5; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 15641219 - 15641122
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttga 97  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||| |||| |||||||| ||||||||||||||||    
T  15641219 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttga 15641122  T

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Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 38684291 - 38684386
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| |||||||||||||||||||  |||||||||||  |||||| |||| |||||||| |||||||||||||||    
T  38684291 ttcggtgggctaagtccatacagagcttgctctggctttaaacgggcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttg 38684386  T

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Target: chr5; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 7085740 - 7085642
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    |||||| |||||||||||||||||| |||||||| |||||||||| | |||||||||||| |||||| |||| |||||||| |||||||||||||||||    
T  7085740 ttcggtgggctaagtccatacagagcttgctctgactttaaacggggtccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaa 7085642  T

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Target: chr5; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 8484775 - 8484679
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||| ||||||||| ||||||||||||||||||| | |||||||||||| |||||| |||| |||||||| |||||||||||||||    
T  8484775 ttcggtgggctaagttcatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 8484679  T

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Target: chr5; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 11465014 - 11464926
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||| ||||||||| || |||||||||||||||| |||||||||||||  ||||| |||| ||||||||||||||||||||||||    
T  11465014 ggctaagttcatacagagcttactctggctttaaacggggccccgcaagtgggtggtgggattggtcccctcgaattagtcgattcttg 11464926  T

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Target: chr5; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 27498845 - 27498749
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| ||||||||||||||| || ||||||||||||||||||| | |||||||||||| |||||| |||| |||||||| |||||||||||||||    
T  27498845 ttcggtgggctaagtccatacatagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 27498749  T

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Target: chr5; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 30485911 - 30486007
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| |||||||||||||||||| || |||||||||||| |||||| |||| |||||||| ||||||| |||||||    
T  30485911 ttcggtgggctaagtccatacagagcttgctctggctttaaacgatgcccccgcaagtgggcggtgggattggtcccctcggattagtcaattcttg 30486007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 5049229 - 5049315
Alignment:
Q  10 ctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| ||||||||| |||||||||||||||||||  |||||||| |||||||||| |||| |||| |||||||||||||||||||    
T  5049229 ctaagttcatacagagcttgctctggctttaaacgggcccccgcaaatggacggtgggattggtcccatcgaattagtcgattcttg 5049315  T

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Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 11926616 - 11926519
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg--ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| |  ||||||||||||  ||||| |||| |||||||| |||||||||||||||    
T  11926616 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggccccccgcaagtgggtggtgggattggtcccctcggattagtcgattcttg 11926519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 35425096 - 35425214
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaac 99  Q
    |||||| |||||||||||||||||| | ||||||||||||||||| | |||||||||||| |||||| |||| ||| |||| ||||||||||||||| |     
T  35425096 ttcggtgggctaagtccatacagagctcgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcctctcggattagtcgattcttggat 35425195  T
Q  100 caaataccgaatcttcaaa 118  Q
    |  ||||||||| ||||||    
T  35425196 cggataccgaattttcaaa 35425214  T

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Target: chr5; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 32059554 - 32059465
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcg 89  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||| |||| |||||||| ||||||||    
T  32059554 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcg 32059465  T

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Target: chr5; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 18207290 - 18207386
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||  ||||| |||||||| |||||| |||| |||||||| |||||||||||||||    
T  18207290 ttcggtgggctaagtccatacagagcttgttctggctttaaacgaggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 18207386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 23270636 - 23270540
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||| ||||||||||||| | |||||||| |||||||||| |||| |||||||| |||||| ||||||||    
T  23270636 ttcggtgggctaagtccatacagagcttgctttggctttaaacggagcccccgcaaatggacggtgggattggtcccctcggattagttgattcttg 23270540  T

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Target: chr5; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 4603867 - 4603949
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcg 89  Q
    |||||||||||||||||| | ||||||||||||||||| ||||| ||||||||||||||| |||| |||||||| ||||||||    
T  4603867 ggctaagtccatacagagctcgctctggctttaaacggggcccctgcaagtggacggtgggattggtcccctcggattagtcg 4603949  T

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Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 34310232 - 34310321
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaac-ggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||||||||| ||||||||||||||||| ||  ||||  ||||||||||||| |||| ||||||||||||| ||||||||||    
T  34310232 ggctaagtccatacagagcttgctctggctttaaacgggacccccataagtggacggtgggattggtcccctcgaattaatcgattcttg 34310321  T

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Target: chr5; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 6014394 - 6014298
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| || ||||||||||||||| ||||||||||||||||||| | || ||||||||| |||||  |||  ||||||||||||||||||||||||    
T  6014394 ttcggtgggttaagtccatacagagcttgctctggctttaaacggggtccacgcaagtgggcggtgagattagtcccctcgaattagtcgattcttg 6014298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 21236469 - 21236378
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    ||||||||||||||||||||| ||||| |||||||||| | |||||||||||| |||||| |||  |||||||  |||||||||||||||||    
T  21236469 ggctaagtccatacagagttttctctgactttaaacggggcccccgcaagtgggcggtgggattagtcccctcagattagtcgattcttgaa 21236378  T

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Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 34049901 - 34049988
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattct 94  Q
    |||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||| | |||| |||||||| |||||| ||||||    
T  34049901 ggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtggtcggtaggattggtcccctcggattagttgattct 34049988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 41351197 - 41351122
Alignment:
Q  21 cagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||| ||||||||||||||||||| || |||||||||| |||||| |||| |||||||| |||||||||||||||    
T  41351197 cagagcttgctctggctttaaacggggctccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 41351122  T

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Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 27487669 - 27487572
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc--gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| | |||||||||||||||| ||||||| ||||||||||| | |||  |||||||| |||||| |||| |||||||| |||||||||||||||    
T  27487669 ttcggtggactaagtccatacagagcttgctctagctttaaacgggggcccttgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 27487572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 19145515 - 19145430
Alignment:
Q  12 aagtccatacagag-tttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||||| ||||||||||||||||| ||| |||||||||||| |||||| |||| |||||||| |||||| | ||||||    
T  19145515 aagtccatacagagctttgctctggctttaaatggtcccccgcaagtgggcggtgggattggtcccctcggattagttggttcttg 19145430  T

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Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 9659425 - 9659329
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaa-cggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| ||||||||||||||| || ||||||||||||||||  ||  ||||||||||||||||||| |||| |||| ||| |||||| ||||||||    
T  9659425 ttcggtgggctaagtccatacacagcttgctctggctttaaatgggccccccgcaagtggacggtgggattggtcccttcggattagttgattcttg 9659329  T

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Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 10869679 - 10869583
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcc-ccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| ||||||||||| || ||| |||||||||||||||| || ||| |||||||||| |||||| |||| |||||||| |||||||| ||||||    
T  10869679 ttcggtgggctaagtccacactgagcttgctctggctttaaatggggcctccgcaagtgggcggtgggattggtcccctcggattagtcggttcttg 10869583  T

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Target: chr5; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 33 - 96
Target Start/End: Complemental strand, 13038537 - 13038473
Alignment:
Q  33 tggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||||||||| ||||| |||||||| |||||| |||||||||||||||||||||||||||||    
T  13038537 tggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttg 13038473  T

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Target: chr5; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 21042661 - 21042581
Alignment:
Q  27 ttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaaccaaatacc 107  Q
    ||||||| |||||||| || ||||||||||||||||||| ||||| ||||||| ||||||||  |||||||| ||||||||    
T  21042661 ttgctctagctttaaatggagccccgcaagtggacggtgaaattggtcccctcaaattagtcagttcttgaatcaaatacc 21042581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 10399863 - 10399962
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatc-ccctcgaattagtcgattcttgaaccaaata 105  Q
    |||||||||||||| |||  ||||||| |||||||||| | ||||| ||||||||||||| |||| || |||||||||||||||||||||| | ||||||    
T  10399863 ggctaagtccatacggagcatgctctgactttaaacggggcccccgtaagtggacggtgggattggtcaccctcgaattagtcgattcttggatcaaata 10399962  T

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Target: chr5; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 42193568 - 42193662
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| ||||||||| |||||||||||||| |||||||||| ||  |||||||||||| ||||||  ||| ||| |||| |||||||||||||||    
T  42193568 ttcggtgggctaagtctatacagagtttgctttggctttaaatgg-accccgcaagtgggcggtggggttggtcctctcggattagtcgattcttg 42193662  T

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Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 13108534 - 13108468
Alignment:
Q  31 tctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||| |||||||||| ||||| |||||||| |||||| |||||||||||||||||||||||||||||    
T  13108534 tctgcctttaaacggggcccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttg 13108468  T

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Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 31288060 - 31287942
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttgaac 99  Q
    |||||| || |||||||||||| || ||||| || |||||||||| ||||| |||||||| |||||| |||| || |||||||||||||| |||||| ||    
T  31288060 ttcggtgggttaagtccatacaaagcttgctttgactttaaacggggcccccgcaagtgggcggtgggattggtctcctcgaattagtcggttcttggac 31287961  T
Q  100 caaataccgaatcttcaaa 118  Q
    |  ||||||| | ||||||    
T  31287960 cggataccgagttttcaaa 31287942  T

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Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 15971142 - 15971085
Alignment:
Q  61 cggtggaattgatcccctcgaattagtcgattcttgaaccaaataccgaatcttcaaa 118  Q
    |||||||||||||||||||||||||||||||||||||| | |||||| ||| ||||||    
T  15971142 cggtggaattgatcccctcgaattagtcgattcttgaatcgaataccaaattttcaaa 15971085  T

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Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 28614589 - 28614508
Alignment:
Q  11 taagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgatt 92  Q
    |||||||||||| || ||| |||| ||||||||||   ||||||  |||||||||| |||||||||||||||||||||||||    
T  28614589 taagtccatacaaagcttgttctgactttaaacgggatcccgcagatggacggtgggattgatcccctcgaattagtcgatt 28614508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 33709615 - 33709521
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccg-caagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| ||||||||||||||||||   |||||||||||||||||  ||||  ||||||| |||||| |||| |||||||| |||||||||||||||    
T  33709615 ttcggtgggctaagtccatacagaga--gctctggctttaaacgggacccccacaagtgggcggtgggattggtcccctcggattagtcgattcttg 33709521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 12398562 - 12398466
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| | |||||| ||||||||| |||||||||||||||| || | |||||||| |||||||||  |||||||| ||| ||||||||| ||||||    
T  12398562 ttcggtggcctaagttcatacagagcttgctctggctttaaatggggcccccgcaaatggacggtgagattgatcctctcaaattagtcggttcttg 12398466  T

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Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 36954909 - 36954997
Alignment:
Q  9 gctaagtccatacagagtttgctctggctttaaa-cggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||||||||||||||||||| ||||||||||  ||  |||||||||||||| |||| |||  |||||||  |||||||||||||||    
T  36954909 gctaagtccatacagagtttgctttggctttaaatgggccccccgcaagtggactgtgggattagtcccctcatattagtcgattcttg 36954997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 22392797 - 22392863
Alignment:
Q  27 ttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgatt 92  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||||| |||||||  |||||||||||    
T  22392797 ttgctctggctttaaacggggcccccgcaagtgggcggtggaattggtcccctcagattagtcgatt 22392863  T

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Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 15971236 - 15971151
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaac-ggtgccccgcaagtggacggtggaattgatcccctcgaatta 85  Q
    |||||| ||||||||||||||| || |||||||| |||||||| ||  |||||||||||| |||||  ||||||||||||| ||||    
T  15971236 ttcggtgggctaagtccatacatagcttgctctgactttaaacgggacccccgcaagtgggcggtgagattgatcccctcggatta 15971151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 26009371 - 26009280
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    |||||||||||| ||||| || |||||||||||||||| | ||||||||||||   |||| |||  |||||||| |||||||| ||||||||    
T  26009371 ggctaagtccatgcagagcttactctggctttaaacggggcccccgcaagtgggtagtgggattagtcccctcggattagtcggttcttgaa 26009280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 37495137 - 37495233
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtgc--------cccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||||||||| ||||||||||||||||||   |        ||||||||||| |||||| |||| |||||||| |||||||||||||||    
T  37495137 ggctaagtccatacagagcttgctctggctttaaacgcccccccccccgcccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 37495233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 10813958 - 10813856
Alignment:
Q  8 ggctaagtccatacagag-tttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaaccaaatac 106  Q
    |||||||||||||| ||| |||||||||||||||||| | ||||| ||||| |  ||||| |||  |||||| | |||||||  |||||||||| |||||    
T  10813958 ggctaagtccatacggagctttgctctggctttaaacagggccccacaagtaggtggtgggatttgtccccttggattagtcagttcttgaaccgaatac 10813859  T
Q  107 cga 109  Q
    |||    
T  10813858 cga 10813856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 13659349 - 13659263
Alignment:
Q  11 taagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||| |||  ||||| || ||||||||||  |||| |||||||| |||||| ||||||||||||| |||| ||||||||||    
T  13659349 taagtccatagagaacttgctttgactttaaacgggacccccgcaagtgggcggtgggattgatcccctcggattaatcgattcttg 13659263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 25587015 - 25587057
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaac 43  Q
    |||||| |||||||||||||||||| |||||||||||||||||    
T  25587015 ttcggtgggctaagtccatacagagcttgctctggctttaaac 25587057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 22693066 - 22693114
Alignment:
Q  48 ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||| |||||| |||| |||||||| |||||||||||||||    
T  22693066 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 22693114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 98
Target Start/End: Original strand, 3639900 - 3639951
Alignment:
Q  47 gccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    ||||||||||||||| |||  ||||||||||||  |||||||||||||||||    
T  3639900 gccccgcaagtggacagtgagattgatcccctcagattagtcgattcttgaa 3639951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 5067391 - 5067440
Alignment:
Q  47 gccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||||||||| |||||| |||| |||||||  |||||||||||||||    
T  5067391 gccccgcaagtgggcggtgggattggtcccctctgattagtcgattcttg 5067440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 38631045 - 38630997
Alignment:
Q  48 ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||| |||||| |||| |||||||| |||| ||||||||||    
T  38631045 ccccgcaagtgggcggtgggattggtcccctcggattaatcgattcttg 38630997  T

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Target: scaffold0623 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 1170 - 1073
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttga 97  Q
    |||||| |||||||||||||||||| |||||||||||||||| || ||||| ||||||||||||||| |||| |||||||||||||||||||||||||    
T  1170 ttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccgcaagtggacggtgggattggtcccctcgaattagtcgattcttga 1073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 66; Significance: 5e-29; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 9413 - 9316
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttga 97  Q
    |||||| |||||||||||||||||| |||||||||||||||| || ||||| ||||||||||||||| |||| |||||||||||||||||||||||||    
T  9413 ttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccgcaagtggacggtgggattggtcccctcgaattagtcgattcttga 9316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 12114 - 12018
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttga 97  Q
    |||||| |||||||||||||||||| |||||||||||||||| || ||||| |||||||||||||| |||| |||||||||||||||| ||||||||    
T  12114 ttcggtgggctaagtccatacagagcttgctctggctttaaatggggccccacaagtggacggtgggattggtcccctcgaattagtcaattcttga 12018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 10807 - 10711
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttga 97  Q
    |||||| |||||||||||||||||| |||||||||||||||| || ||||| |||||||||||||| |||| |||||||||||||||| ||||||||    
T  10807 ttcggtgggctaagtccatacagagcttgctctggctttaaatggggccccacaagtggacggtgggattggtcccctcgaattagtcaattcttga 10711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 15259520 - 15259424
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||||||||||| ||||| ||||| ||||||||||||||||||||||||    
T  15259520 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgtaattggtcccctcgaattagtcgattcttg 15259424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 39349343 - 39349439
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||| ||||||||||||| |||||||||||||||    
T  39349343 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttg 39349439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 4718732 - 4718828
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||| |||| |||||||| |||||||||||||||    
T  4718732 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 4718828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 42328091 - 42328187
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||| |||||||||| ||| |||| ||||||||||||||||||||||||    
T  42328091 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccacaagtggacgatgggattggtcccctcgaattagtcgattcttg 42328187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 2618280 - 2618369
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||| |||| |||||||| |||||||||||||||    
T  2618280 ggctaagtccatacagagcttgctctggctttaaacggagcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 2618369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 8765633 - 8765544
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtgc-cccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||||||||| ||||||||||||||||||| || ||||||||||| |||||| |||| |||||||| |||||||||||||||    
T  8765633 ggctaagtccatacagagcttgctctggctttaaacggggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 8765544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 21603317 - 21603413
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| ||||||| |||||||||| ||||||||||||||||||| | |||||||||||| |||||| |||| |||||||| |||||||||||||||    
T  21603317 ttcggtgggctaagcccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 21603413  T

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Target: chr8; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 25248436 - 25248531
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttga 97  Q
    |||||||||||||||| ||||||||||||||||||||||||||||  || ||||||||| |||||| |||| |||||||| ||||||||||| ||||    
T  25248436 ttcggtaggctaagtc-atacagagtttgctctggctttaaacgggccctcgcaagtgggcggtgggattggtcccctcggattagtcgatttttga 25248531  T

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Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 34237769 - 34237673
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||||||||||  |||||| |||| |||||||| |||||||||||||||    
T  34237769 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttg 34237673  T

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Target: chr8; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 20306002 - 20306091
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaac-ggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||||||||| ||||||||||||||||| ||  |||||||||||| |||||| |||| ||||||||||||||||||| ||||    
T  20306002 ggctaagtccatacagagcttgctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcgaattagtcgatccttg 20306091  T

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Target: chr8; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 21092635 - 21092724
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaac-ggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||||||||| ||||||||||||||||| ||  |||||||||||| |||||| |||| ||||||||||||||||||| ||||    
T  21092635 ggctaagtccatacagagcttgctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcgaattagtcgatccttg 21092724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 3734737 - 3734641
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||||||| ||| | |||| |||| |||||||| |||||||||||||||    
T  3734737 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaaatgggcagtgggattggtcccctcggattagtcgattcttg 3734641  T

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Target: chr8; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 28193561 - 28193657
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| || ||||||||||||||| ||||||||||||||||||| |||||  ||||||| |||||| |||| |||||||| |||||||||||||||    
T  28193561 ttcggtgggttaagtccatacagagcttgctctggctttaaacggggcccctacaagtgggcggtgggattggtcccctcggattagtcgattcttg 28193657  T

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Target: chr8; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 264513 - 264418
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| ||||||||| ||||| || |||||||||||||||||||  |||| ||| ||| |||||  |||||||||||||||||||||||||||||    
T  264513 ttcggtgggctaagtctatacatagcttgctctggctttaaacgggcccccacaaatgggcggtgagattgatcccctcgaattagtcgattcttg 264418  T

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Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 651408 - 651503
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| ||||||||| ||||| || |||||||||||||||||||  |||| ||| ||| |||||  |||||||||||||||||||||||||||||    
T  651408 ttcggtgggctaagtctatacatagcttgctctggctttaaacgggcccccacaaatgggcggtgagattgatcccctcgaattagtcgattcttg 651503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 837143 - 837238
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| ||||||||| ||||| || |||||||||||||||||||  |||| ||| ||| |||||  |||||||||||||||||||||||||||||    
T  837143 ttcggtgggctaagtctatacatagcttgctctggctttaaacgggcccccacaaatgggcggtgagattgatcccctcgaattagtcgattcttg 837238  T

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Target: chr8; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 19471704 - 19471793
Alignment:
Q  9 gctaagtccatacagagtttgctctggctttaaacggtg--ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||||||||||||| ||||||||||||||||||| |  |||||||||||| || ||| |||| ||||||||||||||||||| ||||    
T  19471704 gctaagtccatacagagcttgctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttg 19471793  T

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Target: chr8; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 19542628 - 19542717
Alignment:
Q  9 gctaagtccatacagagtttgctctggctttaaacggtg--ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||||||||||||| ||||||||||||||||||| |  |||||||||||| || ||| |||| ||||||||||||||||||| ||||    
T  19542628 gctaagtccatacagagcttgctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttg 19542717  T

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Target: chr8; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 19590068 - 19589979
Alignment:
Q  9 gctaagtccatacagagtttgctctggctttaaacggtg--ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||||||||||||| ||||||||||||||||||| |  |||||||||||| || ||| |||| ||||||||||||||||||| ||||    
T  19590068 gctaagtccatacagagcttgctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttg 19589979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 27746449 - 27746353
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagt-ggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| |||||||||||||||| || ||||| ||||| || || |||||||  |||||||| |||||||||||||||    
T  27746449 ttcggtgggctaagtccatacagagcttgctctggctttaaaaggggccccacaagtggggcgatggaattagtcccctcggattagtcgattcttg 27746353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 34610801 - 34610705
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccc-cgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| | ||||||| |||||||| ||||||||||||||||||   ||| ||||||||| |||| |||||| ||||||||||||||||||||||||    
T  34610801 ttcggtggtctaagtctatacagagcttgctctggctttaaacgagcccctcgcaagtgggcggtagaattggtcccctcgaattagtcgattcttg 34610705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 42643232 - 42643136
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| |||||||| ||| |||||| | |||||||||||| |||||| |||| |||||||| |||||| ||||||||    
T  42643232 ttcggtgggctaagtccatacagagcttgctctgtcttgaaacgggggccccgcaagtgggcggtgggattggtcccctcgcattagttgattcttg 42643136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 6953121 - 6953013
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaac-ggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaac 99  Q
    |||||| |||||||||||||||||| ||||||||||||||||| ||  |||||||||| | |||||| |||| | |||||| ||||||||||||||| |     
T  6953121 ttcggtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaagttggcggtgggattggt-ccctcggattagtcgattcttggat 6953023  T
Q  100 caaataccga 109  Q
    | ||||||||    
T  6953022 cgaataccga 6953013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 31 - 92
Target Start/End: Complemental strand, 7558034 - 7557973
Alignment:
Q  31 tctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgatt 92  Q
    |||||||||||||||  ||||||||||||||||||| |||| ||||||||||||||||||||    
T  7558034 tctggctttaaacggacccccgcaagtggacggtgggattggtcccctcgaattagtcgatt 7557973  T

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Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 2639501 - 2639429
Alignment:
Q  25 gtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||||||||||||||||| ||||| |||||||| |||||| |||| |||||||| |||||||||||||||    
T  2639501 gtttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 2639429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 28088373 - 28088469
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcc-ccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| || ||||||||||||||| |||||||| ||||||| || ||| |||||||||| |||||| ||||||||||||  | |||||||||||||    
T  28088373 ttcggtgggttaagtccatacagagcttgctctgactttaaatggggcctccgcaagtgggcggtgggattgatcccctcagaatagtcgattcttg 28088469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 32879366 - 32879462
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccg-caagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||| ||||||||| |||||||| | |||||||| |||||  ||||||| |||||| |||| |||||||| |||||||||||||||    
T  32879366 ttcggtgggctaagttcatacagagcttgctctgacattaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcgattcttg 32879462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 2166788 - 2166875
Alignment:
Q  5 gtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgatt 92  Q
    ||||||||||||||||||||| ||||||||||||||||     |||||||||||| |||||| |||| |||||||  |||||||||||    
T  2166788 gtaggctaagtccatacagagcttgctctggctttaaataagaccccgcaagtgggcggtgggattggtcccctcagattagtcgatt 2166875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 21667637 - 21667731
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgc-cccgcaagtggacggtggaattgatcccctcgaattagtcgattctt 95  Q
    |||||| |||||||||||||||||| |||||||| |||||||||| ||  |||||||||| ||||||||||| | |||||  ||||||||||||||    
T  21667637 ttcggtgggctaagtccatacagagcttgctctgcctttaaacggagcatccgcaagtgggcggtggaattggt-ccctcagattagtcgattctt 21667731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 4698837 - 4698744
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattc 93  Q
    |||||| ||||||||||||  |||  ||||||||||||||||||| | |||||||||||  |||||| |||| |||||||| ||||||||||||    
T  4698837 ttcggtgggctaagtccatgaagaacttgctctggctttaaacggagcccccgcaagtgagcggtgggattggtcccctcggattagtcgattc 4698744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 14633041 - 14633137
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgc-cccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| ||||||||| |||||||| ||||||||||||| ||||| ||  || ||||||| |||||| |||| |||||| | |||||||||||||||    
T  14633041 ttcggtgggctaagtctatacagagcttgctctggctttgaacggagcgtccacaagtgggcggtgggattggtccccttggattagtcgattcttg 14633137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 24018476 - 24018566
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacgg--tgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||||||||| |||||||||||||||||||    |||| ||||||| |||||  |||| |||||| |||||||||| ||||||    
T  24018476 ggctaagtccatacagagcttgctctggctttaaacgggcctccccacaagtgggcggtgagattggtccccttgaattagtcggttcttg 24018566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 28964120 - 28964214
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattctt 95  Q
    |||||| |||||||||||||| ||| |   ||||||||||||||| ||||| |||||||| || ||| |||| |||||||||||||||||||||||    
T  28964120 ttcggtgggctaagtccatacggagctatgtctggctttaaacggggcccccgcaagtgggcg-tgggattggtcccctcgaattagtcgattctt 28964214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 20470011 - 20470095
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgatt 92  Q
    |||||||||||||||||| ||||||||||||||||| | | |||||||||||| |||||| |||| |  ||||| |||||||||||    
T  20470011 ggctaagtccatacagagcttgctctggctttaaacagagcccccgcaagtgggcggtgggattggt-tcctcggattagtcgatt 20470095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 36848863 - 36848775
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcg 89  Q
    |||||| |||||||||||||| |||||||||| ||||||||| |  || || ||||||| |||||| |||  ||||||| |||||||||    
T  36848863 ttcggtgggctaagtccatacggagtttgctcgggctttaaatgaggcaccacaagtgggcggtgggattagtcccctcaaattagtcg 36848775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 43817851 - 43817767
Alignment:
Q  13 agtccatacagagtttgctctggctttaaac-ggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||| |||||| ||||| ||||||||| ||  |||||||||||| ||||||||||| || |||| ||||| ||||||||||    
T  43817851 agtccatatagagttcgctctagctttaaacaggacccccgcaagtgggcggtggaattggtctcctcaaattaatcgattcttg 43817767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 1219443 - 1219554
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaaccaaatac 106  Q
    ||||||||||||||||| |||| ||||||||||||||| | ||||  |||||| |||| | || | |||| ||| ||||||||||||||  | | |||||    
T  1219443 ggctaagtccatacagaatttgttctggctttaaacggggcccccataagtgggcggtaggatcggtcccttcggattagtcgattcttagatcgaatac 1219542  T
Q  107 cgaatcttcaaa 118  Q
    ||||| ||||||    
T  1219543 cgaattttcaaa 1219554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 10292149 - 10292250
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaaccaaatac 106  Q
    |||| ||||||| ||||| ||||||||||||||||||| | |||| ||||||| |||||| |||| |||| ||| |||||| |||||||| | | |||||    
T  10292149 ggctgagtccat-cagagattgctctggctttaaacggggcccccacaagtgggcggtgggattggtcccttcggattagttgattcttggatcgaatac 10292247  T
Q  107 cga 109  Q
    |||    
T  10292248 cga 10292250  T

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Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 12312965 - 12313027
Alignment:
Q  33 tggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattctt 95  Q
    |||||||||| ||  |||| ||||||| |||||| |||||||||||||||||||||| |||||    
T  12312965 tggctttaaatgggcccccacaagtgggcggtgggattgatcccctcgaattagtcggttctt 12313027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 18532194 - 18532259
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtg 65  Q
    |||||| |||||||||||||||||  ||||||||| ||||||||| ||||| |||||||| |||||    
T  18532194 ttcggtgggctaagtccatacagaacttgctctggatttaaacggggcccctgcaagtgggcggtg 18532259  T

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Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 18128625 - 18128709
Alignment:
Q  26 tttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaaccaaataccga 109  Q
    |||||||||||||||||||| | |||||||||||| |||||| |||| ||| |||  |||||||| |||||| | | ||||||||    
T  18128625 tttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcctctcagattagtcggttcttggatcgaataccga 18128709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 24999328 - 24999392
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattg 71  Q
    |||||||| |||| |||| ||||||||||||||||||| | |||||||||||| |||||| ||||    
T  24999328 ggctaagttcatatagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattg 24999392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 28908920 - 28908999
Alignment:
Q  12 aagtccatacagag-tttgctctggctttaaacggtgc-cccgcaagtggacggtggaattgatcccctcgaattagtcg 89  Q
    |||||||||||||| |||| ||||||||||||||| || ||||||||||| || ||  ||||||||||||  ||||||||    
T  28908920 aagtccatacagagctttgttctggctttaaacggggctcccgcaagtgggcgatgtgattgatcccctcagattagtcg 28908999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 119
Target Start/End: Complemental strand, 9047383 - 9047274
Alignment:
Q  10 ctaagtccatacagagtttgctctggctttaaacgg-tgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaaccaaataccg 108  Q
    ||||||||||||| || || ||||| ||||||||||   ||||||| |||||| ||||||||| | |||| |||||||||| |||||| | |  ||||||    
T  9047383 ctaagtccatacaaagcttactctgactttaaacggaacccccgcatgtggacagtggaattggt-cccttgaattagtcggttcttggatcggataccg 9047285  T
Q  109 aatcttcaaac 119  Q
    ||| |||||||    
T  9047284 aattttcaaac 9047274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 42332108 - 42332067
Alignment:
Q  18 atacagagtttgctctggctttaaacggtgccccgcaagtgg 59  Q
    |||||||||||| |||||||||||||||| | ||||||||||    
T  42332108 atacagagtttgttctggctttaaacggtcctccgcaagtgg 42332067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 33747017 - 33747065
Alignment:
Q  48 ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||||||||||||||| | | |||| |||||||||| ||||    
T  33747017 ccccgcaagtggacggtggaattggttctctcggattagtcgatccttg 33747065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 34639312 - 34639224
Alignment:
Q  11 taagtccatacagag-tttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    ||||||||||||||| |||||||||||||  |||||  | | ||||||||||||| | |||| |||| |||||||| ||| | ||||||    
T  34639312 taagtccatacagagctttgctctggcttagaacgggcctctgcaagtggacggtaggattggtcccttcgaattaatcggtccttgaa 34639224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 5609316 - 5609220
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| |||||||||||||||| || ||||| ||||||||||||||| ||||||||||||| |||||||||||||||    
T  5609316 ttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccgcaagtggacggtgggattgatcccctcggattagtcgattcttg 5609220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 45787811 - 45787722
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||||||||| ||||||||||||||||| | ||||| ||||||||||||||| |||| ||||||||||||||||||||||||    
T  45787811 ggctaagtccatacagagcttgctctggctttaaacagggcccccgcaagtggacggtgggattggtcccctcgaattagtcgattcttg 45787722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 34844872 - 34844776
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||| |||| |||||||| |||||||||||||||    
T  34844872 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 34844776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 40058966 - 40058870
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||| |||| |||||||| |||||||||||||||    
T  40058966 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 40058870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 44343604 - 44343695
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtgc-cccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    |||||||||||||||||| |||||||| |||||||||| || ||||||||||| |||||| |||| ||||||||||||||||||||||||||    
T  44343604 ggctaagtccatacagagcttgctctgactttaaacggggctcccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttgaa 44343695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 52983709 - 52983798
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||| |||| |||||||| |||||||||||||||    
T  52983709 ggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 52983798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 55961867 - 55961750
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaacc 100  Q
    |||||| |||||||||||||||||| |||||||| |||||||||| ||||| ||||||| |||||| |||| | || ||| |||| |||||||||||| |    
T  55961867 ttcggtgggctaagtccatacagagcttgctctgactttaaacggggccccacaagtgggcggtgggattggttccttcggattaatcgattcttgaatc 55961768  T
Q  101 aaataccgaatcttcaaa 118  Q
     |||||||||| ||||||    
T  55961767 gaataccgaattttcaaa 55961750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 19660646 - 19660550
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| || ||||||||||||||| ||||||||||||||||| | ||||| |||||||| |||||| ||||||||||||| |||||||||||||||    
T  19660646 ttcggtgggataagtccatacagagcttgctctggctttaaacagggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttg 19660550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 32990518 - 32990614
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||| |||| |||||||| | |||||||||||||    
T  32990518 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggactagtcgattcttg 32990614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 27528909 - 27528813
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| |||||||||||||| |||| | |||||||||||| |||||  |||| |||||||| |||||||||||||||    
T  27528909 ttcggtgggctaagtccatacagagcttgctctggctttatacggggcccccgcaagtgggcggtgagattggtcccctcggattagtcgattcttg 27528813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 54127456 - 54127360
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| ||||||||| |||||||| ||||||||||||||||||| | |||||||||||| |||||| |||| |||||||| |||||||| ||||||    
T  54127456 ttcggtgggctaagtctatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggttcttg 54127360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 46714476 - 46714574
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    |||||| |||||||||||||||||| |||| || ||||||||||| | |||||||||||| |||||| |||| |||||||| ||||||| |||||||||    
T  46714476 ttcggtgggctaagtccatacagagcttgcccttgctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcaattcttgaa 46714574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 18875630 - 18875513
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaacc 100  Q
    |||||| |||||||||||||||||| |||||||||||||||||||  |||| |||||||   |||| ||||||||||||| ||||||| ||| ||| | |    
T  18875630 ttcggtgggctaagtccatacagagcttgctctggctttaaacgggcccccacaagtgggtagtgggattgatcccctcggattagtcaatttttggatc 18875531  T
Q  101 aaataccgaatcttcaaa 118  Q
    | ||||||| | ||||||    
T  18875530 agataccgagttttcaaa 18875513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 20078098 - 20078002
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||||| |||||| |||  | |||||| |||||||||||||||    
T  20078098 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgtaagtgggcggtgggattagttccctcggattagtcgattcttg 20078002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 20566433 - 20566529
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| ||| |||||||||||||| ||||||||||||||||||| | |||||||||||| || ||| |||| |||||||  |||||||||||||||    
T  20566433 ttcggtgggcaaagtccatacagagcttgctctggctttaaacggagcccccgcaagtgggcgctgggattggtcccctcagattagtcgattcttg 20566529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 32986280 - 32986376
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| |||||||| ||||||| || | |||||||||||| |||||| |||| |||||||| | |||||||||||||    
T  32986280 ttcggtgggctaagtccatacagagcttgctctgactttaaatggggcccccgcaagtgggcggtgggattggtcccctcggaatagtcgattcttg 32986376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 34723882 - 34723978
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| ||||||||||||||| || ||||||||||||||||||| | ||||||||||||  ||||| |||| ||| |||| |||||||||||||||    
T  34723882 ttcggtgggctaagtccatacaaagcttgctctggctttaaacggggcccccgcaagtgggtggtgggattggtcctctcggattagtcgattcttg 34723978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 13873409 - 13873317
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaac-ggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgatt 92  Q
    ||||||||||||||| ||||||||||||||||| |||| |||| ||  ||||||||||||  |||||||||||||| || | |||||||||||    
T  13873409 ttcggtaggctaagttcatacagagtttgctctagcttcaaacagggcccccgcaagtgggtggtggaattgatcctctgggattagtcgatt 13873317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 32942453 - 32942549
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacgg-tgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| || ||||||||||||||||   |||| |||||||||||||| |||| |||||||| || | ||||||||||    
T  32942453 ttcggtgggctaagtccatacagagcttactctggctttaaacggcccccccacaagtggacggtgggattggtcccctcggataaatcgattcttg 32942549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 33696393 - 33696297
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| |||||||||||||||| || | |||||||||||| |||||  |||| ||| |||| ||||||| |||||||    
T  33696393 ttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccgcaagtgggcggtgagattggtcctctcggattagtcaattcttg 33696297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 51535710 - 51535799
Alignment:
Q  11 taagtccatacagagtttgc---tctggctttaaacggtgcccc--gcaagtggacggtggaattgatcccctcgaattagtcgattctt 95  Q
    ||||||||||||||| ||||   ||||||||||||||| |||||  |||||||| |||||| |||| |||||||||||||||||||||||    
T  51535710 taagtccatacagagcttgcagctctggctttaaacggggcccccagcaagtgggcggtgggattggtcccctcgaattagtcgattctt 51535799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 13584361 - 13584270
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtgccc-cgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    ||||||||||||| |||| ||||||||||||||||||| |||| | ||| ||  ||||||||||| || |||||||||||||| ||||||||    
T  13584361 ggctaagtccatagagagcttgctctggctttaaacggggccctcacaaatgagcggtggaattggtctcctcgaattagtcggttcttgaa 13584270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 30879265 - 30879162
Alignment:
Q  15 tccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaaccaaataccgaatctt 114  Q
    |||||||| ||||||||||||||||||| || | || ||||||||||||||| |||| | |||||  |||| |||||||||| | || ||||||||| ||    
T  30879265 tccatacaaagtttgctctggctttaaagggggtcctgcaagtggacggtgggattggttccctcagattaatcgattcttggatcagataccgaatttt 30879166  T
Q  115 caaa 118  Q
    ||||    
T  30879165 caaa 30879162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 49287941 - 49288036
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| ||||||||||||||| | |||||| |||||||||||||   ||||||||||| || ||  |||| |||||||| |||||||||||||||    
T  49287941 ttcggtgggctaagtccatacaaaatttgctatggctttaaacgggctcccgcaagtgggcgctgagattggtcccctcggattagtcgattcttg 49288036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 25969604 - 25969519
Alignment:
Q  12 aagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    |||||||||||||  |||||||||||||||||||  ||||| |||||  |||||| |||| | ||||||||||||||||||||||||    
T  25969604 aagtccatacagaacttgctctggctttaaacgggcccccgtaagtgagcggtgggattggt-ccctcgaattagtcgattcttgaa 25969519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 35229250 - 35229347
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacgg--tgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| ||||||||||||||| || |||||||| ||||||||||    |||| ||||||  |||||| |||| ||||||||||||||||||||||||    
T  35229250 ttcggtgggctaagtccatacatagcttgctctgactttaaacgggtccccccacaagtgagcggtgggattggtcccctcgaattagtcgattcttg 35229347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 9517748 - 9517659
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||||||||| |||||||| |||||||||| | ||||||| ||||  ||||  |||| |||||||| |||||||||||||||    
T  9517748 ggctaagtccatacagagcttgctctgactttaaacggggcccccgcaggtgggtggtgagattggtcccctcggattagtcgattcttg 9517659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 12824490 - 12824579
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||| |||| |||||||||||| |||||||| || || || ||||||||||||||| |||| || | |||||||||||||||||||    
T  12824490 ggctaagttcatatagagtttgctctagctttaaatggagctcctgcaagtggacggtgggattggtctcatcgaattagtcgattcttg 12824579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 22488142 - 22488053
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcg 89  Q
    |||||| | ||||||||||| |||| ||| ||||||||||||||| | |||||||| ||| |||||| |||||||||||| |||||||||    
T  22488142 ttcggtggactaagtccatatagagcttgttctggctttaaacggggcccccgcaaatgggcggtgggattgatcccctcaaattagtcg 22488053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 118
Target Start/End: Original strand, 4912035 - 4912127
Alignment:
Q  27 ttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttgaaccaaataccgaatcttcaaa 118  Q
    ||||||||||||||||||| ||||| ||||||||  ||||  |||||||||| |||||||||||||||||| | || ||||||| | ||||||    
T  4912035 ttgctctggctttaaacggagcccccgcaagtgggtggtgtgattgatccccccgaattagtcgattcttggatcagataccgagttttcaaa 4912127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 7392068 - 7391984
Alignment:
Q  11 taagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattctt 95  Q
    |||||||||||||||||||||||||||||||| ||  ||||   ||||| |||||| |||| |||||||| |||||||| |||||    
T  7392068 taagtccatacagagtttgctctggctttaaatgggacccccatagtgggcggtgggattgttcccctcggattagtcggttctt 7391984  T

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Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 25852297 - 25852407
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggcttt-aaacggtgccc-cgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||||  ||| ||||||||| |  ||| |||| |||||||| |||||||| |||||| |    
T  25852297 ttcggtgggctaagtccatacagagcttgctctggctttaaaacgggaccctcgcaagtgggcaatgggattggtcccctcggattagtcggttcttgga 25852396  T
Q  99 ccaaataccga 109  Q
    ||  |||||||    
T  25852397 ccggataccga 25852407  T

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Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 40307648 - 40307709
Alignment:
Q  26 tttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagt 87  Q
    |||||||||| ||  |||| |||||| | |||||||||||||||||||||||||||||||||    
T  40307648 tttgctctggtttagaacgctgccccactagtggacggtggaattgatcccctcgaattagt 40307709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 47464212 - 47464111
Alignment:
Q  11 taagtccatacagagttt-gctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaaccaaataccga 109  Q
    |||||||||||||||||| | | ||||||  | ||| ||||||||||||||||||||||||| || |||  ||||||||| | |||||| || |||||||    
T  47464212 taagtccatacagagttttgttatggcttagagcggggccccgcaagtggacggtggaattggtctccttaaattagtcggtccttgaatcagataccga 47464113  T
Q  110 at 111  Q
    ||    
T  47464112 at 47464111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 13550291 - 13550387
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||| ||| || |||||||||||||||| | |||| ||||||| |||| | || | |||||||| |||| ||||||||||    
T  13550291 ttcggtgggctaagtccataccgagcttactctggctttaaacggggtccccacaagtgggcggtaggataggtcccctcggattaatcgattcttg 13550387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 27574401 - 27574497
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||||||||| | ||||||||| |||||||||||||||| || | |||||||||||| |||||   ||| |||||||| |||| || |||||||    
T  27574401 ttcggtaggctaaattcatacagagcttgctctggctttaaaaggggcccccgcaagtgggcggtgagtttggtcccctcggattaatcaattcttg 27574497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 33992709 - 33992773
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggt 64  Q
    |||||| ||||||||||||||| || ||||||||||||||||||| | |||||||||||| ||||    
T  33992709 ttcggtgggctaagtccatacatagcttgctctggctttaaacggggcccccgcaagtgggcggt 33992773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 35674855 - 35674791
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggt 64  Q
    |||||| |||||||||||||||||| |||||||| |||||||||| | |||||||||||| ||||    
T  35674855 ttcggtgggctaagtccatacagagcttgctctgcctttaaacggggcccccgcaagtgggcggt 35674791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 36131624 - 36131532
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgatt 92  Q
    |||||| | |||||||||||||||| ||||| || ||||||||||  |||| | |||||| |||||| |||| |||||||| |||||||||||    
T  36131624 ttcggtggcctaagtccatacagagcttgctatgactttaaacgggacccccgtaagtgggcggtgggattggtcccctcggattagtcgatt 36131532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 10143779 - 10143841
Alignment:
Q  36 ctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    ||||||||||  ||||||||||||||||||| |||| ||||||||||||| | ||| ||||||    
T  10143779 ctttaaacgggtccccgcaagtggacggtgggattggtcccctcgaattaattgatccttgaa 10143841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 12500165 - 12500064
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaac-ggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaaccaaatac 106  Q
    ||||||||||||||| || ||||||||||||||||| ||  |||||||||||| ||||  ||||||| | |||| ||||||| ||||||| |||  ||||    
T  12500165 ggctaagtccatacatagcttgctctggctttaaacgggacccccgcaagtgggcggtaaaattgat-ctctcggattagtcaattcttggaccggatac 12500067  T
Q  107 cga 109  Q
    |||    
T  12500066 cga 12500064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 21387592 - 21387509
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaac-ggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgatt 92  Q
    ||||||||| |||||||| ||||||||||||||||| ||  |||||||||||| ||||||   || |||||||| |||||||||||    
T  21387592 ggctaagtctatacagagcttgctctggctttaaacgggatccccgcaagtgggcggtgg--gtggtcccctcggattagtcgatt 21387509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 51595131 - 51595201
Alignment:
Q  27 ttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||| ||||||||||   ||||||||||||||||||||||||||| | ||| |||| ||||||||||    
T  51595131 ttgctctgactttaaacgggatccccgcaagtggacggtggaattgatctcttcggattaatcgattcttg 51595201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 1985926 - 1986014
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||||||||||   |||||||||||||||| | |||| ||||||| ||||||||||| | |  ||| |||||||||||||||    
T  1985926 ggctaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtggaattggt-ctatcggattagtcgattcttg 1986014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 51 - 96
Target Start/End: Original strand, 23639758 - 23639803
Alignment:
Q  51 cgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||||||| |||| |||||||| |||||||||||||||    
T  23639758 cgcaagtggacggtgggattggtcccctcggattagtcgattcttg 23639803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 51 - 96
Target Start/End: Original strand, 23645416 - 23645461
Alignment:
Q  51 cgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||||||| |||| |||||||| |||||||||||||||    
T  23645416 cgcaagtggacggtgggattggtcccctcggattagtcgattcttg 23645461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 20527147 - 20527039
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaacc 100  Q
    |||||| ||||||||||||| |||| ||| | | | ||||||| | |||||| |||||| |||| | |||| || ||||| ||||||||||| ||| | |    
T  20527147 ttcggtgggctaagtccatatagagcttgatttcggtttaaacagggccccgtaagtgggcggtaggattggtctcctcggattagtcgatttttggatc 20527048  T
Q  101 aaataccga 109  Q
    |||||||||    
T  20527047 aaataccga 20527039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 52494623 - 52494667
Alignment:
Q  52 gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||| |||||| |||| ||||||||||||||||||||||||    
T  52494623 gcaagtgggcggtgggattggtcccctcgaattagtcgattcttg 52494667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 91
Target Start/End: Original strand, 51961993 - 51962034
Alignment:
Q  50 ccgcaagtggacggtggaattgatcccctcgaattagtcgat 91  Q
    ||||||||||||||||| |||| ||||||||||||| |||||    
T  51961993 ccgcaagtggacggtgggattggtcccctcgaattaatcgat 51962034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 4585799 - 4585732
Alignment:
Q  27 ttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattctt 95  Q
    ||||| |||||||||||||  |||||||||||| |||||| |||| |||  ||| ||||||||||||||    
T  4585799 ttgctttggctttaaacgggcccccgcaagtgggcggtgg-attggtcctttcggattagtcgattctt 4585732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 13771596 - 13771500
Alignment:
Q  2 tcggtaggctaagtccatacagagtt-tgctctggctttaaacggtgc-cccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||| ||||||||||||||  || | |||||||||||||||||| || |||||||||||| | ||  |||| ||||||  ||||||||| ||||||    
T  13771596 tcggtgggctaagtccatacgaagctatgctctggctttaaacggggctcccgcaagtggatgatgagattggtcccctataattagtcggttcttg 13771500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 10190856 - 10190760
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||| |||| |||||||| |||||||||||||||    
T  10190856 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtggacggtgggattggtcccctcggattagtcgattcttg 10190760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 40133563 - 40133467
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||| |||| ||||||||||||||||||||||||    
T  40133563 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttg 40133467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 29915383 - 29915286
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    |||||| |||||||| ||||||||| |||| ||||||||||||||  |||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  29915383 ttcggtgggctaagtacatacagagcttgccctggctttaaacgggcccccgcaagtgggcggtgggattgatcccatcgaattagtcgattcttgaa 29915286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 29964536 - 29964439
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    |||||| |||||||| ||||||||| |||| ||||||||||||||  |||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  29964536 ttcggtgggctaagtacatacagagcttgccctggctttaaacgggcccccgcaagtgggcggtgggattgatcccatcgaattagtcgattcttgaa 29964439  T

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Target: chr3; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 10083933 - 10083837
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||| |||| |||||||| |||||||||||||||    
T  10083933 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccacaagtggacggtgggattggtcccctcggattagtcgattcttg 10083837  T

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Target: chr3; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 24165817 - 24165733
Alignment:
Q  12 aagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||| |||||| |||| |||||||| |||||||||||||||    
T  24165817 aagtccatacagagcttgctctggctttaaacggggccccgcaagtgggcggtgggattgttcccctcggattagtcgattcttg 24165733  T

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Target: chr3; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 35492994 - 35493090
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||| |||| |||||||| |||||||||||||||    
T  35492994 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 35493090  T

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Target: chr3; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 15566613 - 15566518
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| |||||||||||||||||||  |||||||||||| |||||| |||| |||||||  |||||||||||||||    
T  15566613 ttcggtgggctaagtccatacagagcttgctctggctttaaacgggcccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttg 15566518  T

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Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 52821741 - 52821654
Alignment:
Q  9 gctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||||||||||||| ||||||||||||||||||| |||||| |||||| |||||| |||| |||||||| |||||||||||||||    
T  52821741 gctaagtccatacagagcttgctctggctttaaacggggccccgtaagtgggcggtgggattggtcccctcggattagtcgattcttg 52821654  T

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Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 53424290 - 53424195
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||||||||| |||||||||||||  |||||||||||  |||||| |||| |||||||| |||||||||||||||    
T  53424290 ttcggtgggctaagtccatacagagtttgctatggctttaaacgggcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttg 53424195  T

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Target: chr3; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 8456264 - 8456166
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||||||||||| | |||| |||| |||||||| |||||||||||||||||    
T  8456264 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcagtgggattggtcccctcggattagtcgattcttgaa 8456166  T

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Target: chr3; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 53234024 - 53233927
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttga 97  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||| | |||||||||||| |||||| |||| |||||||| ||||||||||||||||    
T  53234024 ttcggtgggctaagtccatacagagcttgctctggctctaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttga 53233927  T

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Target: chr3; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 21363026 - 21363122
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||| |||| | |||||| |||| ||||||||||    
T  21363026 ttcggtaggctaagtccatacagagcttgctctggctttaaacggagcccccgcaagtgggcggtgggattggttccctcggattaatcgattcttg 21363122  T

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Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 25289828 - 25289733
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||| |||| | ||||||||||||||||||||||    
T  25289828 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggt-ccctcgaattagtcgattcttg 25289733  T

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Target: chr3; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 49258376 - 49258280
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||| ||||||| |||||| |||| |||||||| |||||||||||||||    
T  49258376 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcgattcttg 49258280  T

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Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 45529861 - 45529771
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttga 97  Q
    |||||||||||||||||| |||||||||||||||||||  |||| |||||||| |||||| |||| |||||||| ||||||||||||||||    
T  45529861 ggctaagtccatacagagcttgctctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttga 45529771  T

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Target: chr3; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 8097386 - 8097297
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||||||||||||||  |||||||||||||||||| ||||| |||||||| |||||| |||| |||||||| |||||||||||||||    
T  8097386 ggctaagtccatacagagcatgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 8097297  T

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Target: chr3; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 25379851 - 25379940
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||||||||| ||||||||||||||||||| | ||||||||| || |||||| |||| |||||||| |||||||||||||||    
T  25379851 ggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagcgggcggtgggattggtcccctcggattagtcgattcttg 25379940  T

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Target: chr3; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 10 - 118
Target Start/End: Original strand, 30257716 - 30257825
Alignment:
Q  10 ctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttgaaccaaataccg 108  Q
    |||||||||||||||| |||||||||||||||| || ||||| |||||||| |||||| |||| |||||||| ||||||||||||||| | |  ||||||    
T  30257716 ctaagtccatacagagcttgctctggctttaaatggggcccccgcaagtgggcggtggcattggtcccctcggattagtcgattcttggatcggataccg 30257815  T
Q  109 aatcttcaaa 118  Q
    ||| ||||||    
T  30257816 aattttcaaa 30257825  T

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Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 18177001 - 18176905
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| | |||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||| |||| |||| ||| |||||||||||||||    
T  18177001 ttcggtggactaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccatcggattagtcgattcttg 18176905  T

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Target: chr3; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 32151507 - 32151603
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||  ||||||||| ||||||||||||||||||| ||||| |||||||| |||||  |||| ||||||||||||||||||||||||    
T  32151507 ttcggtgggctaagctcatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgagattggtcccctcgaattagtcgattcttg 32151603  T

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Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 46576438 - 46576527
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||| | |||| |||||| | |||||||||||||||    
T  46576438 ggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtcggattggtccccttggattagtcgattcttg 46576527  T

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Target: chr3; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 48977471 - 48977560
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcg 89  Q
    |||||| || ||||||||||||||| ||||||||||||||||||| ||||| |||||||| |||||| |||| |||||||| ||||||||    
T  48977471 ttcggtgggttaagtccatacagagcttgctctggctttaaacggggcccctgcaagtgggcggtgggattggtcccctcggattagtcg 48977560  T

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Target: chr3; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 4462723 - 4462811
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||| ||||||||| || |||| ||||||||||| |||||||||||||||||||| |||||||| |||| ||||||  |||||||    
T  4462723 ggctaagttcatacagagcttactctagctttaaacggggccccgcaagtggacggtgggattgatccactcggattagtttattcttg 4462811  T

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Target: chr3; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 26174196 - 26174292
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| || ||||||||||||||| ||||||||||||||||  | ||||| |||||||| |||||| |||| |||||||| |||||||||||||||    
T  26174196 ttcggtgggttaagtccatacagagcttgctctggctttaaatagggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 26174292  T

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Target: chr3; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 39041966 - 39041870
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||| ||||| ||||||||||||||||||| | ||||||||||||  ||||| |||| ||| |||| |||||||||||||||    
T  39041966 ttcggtgggctaagtccatgcagagcttgctctggctttaaacggggcccccgcaagtgggtggtgggattggtccactcggattagtcgattcttg 39041870  T

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Target: chr3; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 45272530 - 45272434
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| | |||||||||||| |||||| |||| |||||||| |||||| || |||||    
T  45272530 ttcggtgggctaagtccatacggagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagttgactcttg 45272434  T

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Target: chr3; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 1242063 - 1242134
Alignment:
Q  8 ggctaagtccatacagag-tttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccct 78  Q
    |||||||||||||||||| |||||||||||||||||||| | ||||||||||| ||||||||||| ||||||    
T  1242063 ggctaagtccatacagagctttgctctggctttaaacggggtcccgcaagtgggcggtggaattggtcccct 1242134  T

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Target: chr3; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 33398569 - 33398486
Alignment:
Q  14 gtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||| ||||||| ||||||||||| ||||| |||||||| |||||| |||| | ||||||||||||||||||||||    
T  33398569 gtccatacagagcttgctctagctttaaacggggcccccgcaagtgggcggtgggattggttccctcgaattagtcgattcttg 33398486  T

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Target: chr3; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 30807267 - 30807171
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg--ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| |  |||||||||||| |||| | |||| | |||||| |||||||||||||||    
T  30807267 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggccccccgcaagtgggcggtaggattggt-ccctcggattagtcgattcttg 30807171  T

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Target: chr3; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 51532872 - 51532990
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttgaac 99  Q
    |||||| |||||||||||||||||| |||||||  ||||||| ||  |||| ||||||||||||||| |||| |||||||  |||||||| ||||||| |    
T  51532872 ttcggtgggctaagtccatacagagcttgctctaactttaaatgggacccccgcaagtggacggtgggattggtcccctcagattagtcggttcttgatc 51532971  T
Q  100 caaataccgaatcttcaaa 118  Q
    | |||||||| | ||||||    
T  51532972 cgaataccgagttttcaaa 51532990  T

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Target: chr3; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 31537945 - 31537856
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||||| |||||||| || |||||||||||||||| ||||| |||||||| |||||  |||| |||||||||||||||| |||||||    
T  31537945 ggctaagtctatacagagcttactctggctttaaacggagcccctgcaagtgggcggtgagattggtcccctcgaattagtcaattcttg 31537856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 54475777 - 54475873
Alignment:
Q  14 gtccatacagagtttgctctggctttaaacggtgcc-ccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaaccaaataccga 109  Q
    |||||||||||| ||||| ||||||||||||| ||| |||||||||| |||||| |||| |||||| | ||||||||||||||| | || |||||||    
T  54475777 gtccatacagagcttgctttggctttaaacggggccaccgcaagtgggcggtgggattggtccccttggattagtcgattcttggatcagataccga 54475873  T

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Target: chr3; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 53288826 - 53288735
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgatt 92  Q
    |||||| | ||||||||||||| || ||||| ||||||||||||| |||||||||  ||||||||  |||  ||||||||||||||||||||    
T  53288826 ttcggtggactaagtccatacaaagcttgctttggctttaaacggggccccgcaaacggacggtgagattagtcccctcgaattagtcgatt 53288735  T

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Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 2511411 - 2511313
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcc-ccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    |||||| |||||||| ||||||||| | |||||| ||||||||||  || |||||||||| |||||| |||| || |||||||||||| ||||||||||    
T  2511411 ttcggtgggctaagttcatacagagctcgctctgactttaaacgggacctccgcaagtgggcggtgggattggtctcctcgaattagtagattcttgaa 2511313  T

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Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 7470329 - 7470251
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctc 79  Q
    |||||| |||||||| ||||||||| ||||||||||||||||||| |||| |||||||| | |||| |||| |||||||    
T  7470329 ttcggtgggctaagttcatacagagcttgctctggctttaaacggggccctgcaagtgggcagtgggattggtcccctc 7470251  T

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Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 40940908 - 40941026
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaac 99  Q
    |||||| | |||||||||||||||| |||||||| |||||||||| | |||| |||||||  ||| | |||| ||||||||||||| || |||||||||     
T  40940908 ttcggtggactaagtccatacagagcttgctctgactttaaacggggcccccacaagtgggtggtaggattggtcccctcgaattactcaattcttgaat 40941007  T
Q  100 caaataccgaatcttcaaa 118  Q
    || ||||||| | ||||||    
T  40941008 cagataccgagttttcaaa 40941026  T

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Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 34492682 - 34492593
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||| |||| |||  ||  |||||| ||||||||    
T  34492682 ggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtccattcagattagttgattcttg 34492593  T

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Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 14343395 - 14343307
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||||||||  |||||||| |||||||||||  ||| ||||||  |||| |||||||||||||   |||||||||||||||    
T  14343395 ggctaagtccatacagaacttgctctgcctttaaacggtatcccacaagtgagcggtagaattgatccccttagattagtcgattcttg 14343307  T

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Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 24407344 - 24407440
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccc-cgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| || |||||  ||||||| ||||||||| |||||||||| |||  ||||||||| |||||| |||| |||||||| |||||||||||||||    
T  24407344 ttcggtgggttaagtatatacagaatttgctctgactttaaacggggccatcgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 24407440  T

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Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 33698806 - 33698726
Alignment:
Q  15 tccatacagagtttgctctggctttaaacggtgc-cccgcaagtggacggtggaattgatcccctcgaattagtcgattct 94  Q
    |||||| |||||||||||||||||||||||| || ||||||| |||  ||||| |||| ||||||| ||||||||||||||    
T  33698806 tccatatagagtttgctctggctttaaacggggctcccgcaaatgggtggtgggattggtcccctcaaattagtcgattct 33698726  T

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Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 26108375 - 26108434
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtgg 59  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | ||||||||||||    
T  26108375 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgg 26108434  T

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Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 25344162 - 25344077
Alignment:
Q  10 ctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattctt 95  Q
    |||||||||||||||||||||||||||||||||||| | |||||| ||||| || ||| |||| |  ||||| ||||||||||||||    
T  25344162 ctaagtccatacagagtttgctctggctttaaacggggcccccgctagtgggcgatgggattggt-tcctcggattagtcgattctt 25344077  T

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Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 52455756 - 52455667
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||||| | |||||| |||||||| |||||||||| ||||| |||||||   ||||| |||| |||||||| |||||||||||||||    
T  52455756 ggctaagtctacacagagcttgctctgactttaaacggggcccccgcaagtgactggtgggattggtcccctcggattagtcgattcttg 52455667  T

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Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 6127555 - 6127625
Alignment:
Q  20 acagagtttgctctggctttaaac-ggtgccccgcaagtggacggtggaattgatcccctcgaattagtcg 89  Q
    |||||||||||||||| ||||||| ||  |||||||| |||||||||| |||| ||||||| |||||||||    
T  6127555 acagagtttgctctggttttaaacaggctccccgcaaatggacggtgggattggtcccctcaaattagtcg 6127625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 1692917 - 1693014
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    |||||| | ||||||| |||||||  |||||||||||||| || |  |||||||||||| |||||| |||   ||||||  |||||||||||||||||    
T  1692917 ttcggtggactaagtctatacagaacttgctctggctttagacaggcccccgcaagtgggcggtgggatttgccccctcagattagtcgattcttgaa 1693014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 8958143 - 8958031
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtg--ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaaccaaata 105  Q
    ||||||||||||||| || ||||||| ||||||||  | |  |||||||||||| |||||| |||| |||||||  |||| |||||||||| | || |||    
T  8958143 ggctaagtccatacaaagcttgctctagctttaaaatggggcccccgcaagtgggcggtgggattggtcccctctgattaatcgattcttggatcagata 8958044  T
Q  106 ccgaatcttcaaa 118  Q
    |||| | ||||||    
T  8958043 ccgagttttcaaa 8958031  T

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Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 19857184 - 19857232
Alignment:
Q  50 ccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    |||||||||| ||||||||||| |||||||| | |||||||||||||||    
T  19857184 ccgcaagtgggcggtggaattggtcccctcgcaatagtcgattcttgaa 19857232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 48972815 - 48972730
Alignment:
Q  11 taagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    ||||| |||| ||||||||||||| ||||||||||  |||  |||||||  |||| ||||| |||  |||||||||||||||||||||    
T  48972815 taagttcatatagagtttgctctgactttaaacggatccc--caagtggggggtgaaattggtccattcgaattagtcgattcttgaa 48972730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 53848500 - 53848452
Alignment:
Q  48 ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||| |||||| |||| |||||||| |||||||||||||||    
T  53848500 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 53848452  T

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Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 17579243 - 17579157
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtgcc--ccgcaagtggacggtggaattgatcccctcgaattagtcgatt 92  Q
    |||||||||||||||||| ||||| | |||||||||||  ||  |||||||||| |||||  |||| |||||||  |||||||||||    
T  17579243 ggctaagtccatacagagcttgctttagctttaaacgggaccctccgcaagtgggcggtgagattggtcccctcagattagtcgatt 17579157  T

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Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 1178265 - 1178349
Alignment:
Q  12 aagtccatacagag-tttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||||  ||||||||||||||||| || ||||| || |||| |||||| |||| | |||||| ||||||||| |||||    
T  1178265 aagtccatacagaactttgctctggctttaaatggggccccacacgtgggcggtgggattggt-ccctcggattagtcgaatcttg 1178349  T

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Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 26158942 - 26158983
Alignment:
Q  48 ccccgcaagtggacggtggaattgatcccctcgaattagtcg 89  Q
    |||||||||||| |||||| ||||||||||||| ||||||||    
T  26158942 ccccgcaagtgggcggtgggattgatcccctcggattagtcg 26158983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 34844476 - 34844549
Alignment:
Q  17 catacagag-tttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcg 89  Q
    ||||||||| |||||| |||||||||| ||  ||||||||||||| ||||| ||||  ||||||| ||||||||    
T  34844476 catacagagctttgctatggctttaaatgggcccccgcaagtggatggtgggattggacccctcggattagtcg 34844549  T

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Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 4048085 - 4048129
Alignment:
Q  52 gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||||||||||| |||| |||||||| |||||| ||||||||    
T  4048085 gcaagtggacggtgggattggtcccctcggattagttgattcttg 4048129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 4252462 - 4252414
Alignment:
Q  48 ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||| |||||||||||||| |||| |||||||| |||||||||| ||||    
T  4252462 ccccacaagtggacggtgggattggtcccctcggattagtcgatccttg 4252414  T

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Target: chr7 (Bit Score: 64; Significance: 8e-28; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 29861757 - 29861852
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattctt 95  Q
    |||||| |||||||||||||||||  ||||||||||||||||||| ||||| |||||||| |||||| ||||||||||||||||||||||||||||    
T  29861757 ttcggtgggctaagtccatacagaacttgctctggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcgaattagtcgattctt 29861852  T

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Target: chr7; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 10091275 - 10091372
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttga 97  Q
    |||||| |||||||||||||||||| |||||||||||||||| || | |||||||||||| |||||| ||||||||||||| ||||||||||||||||    
T  10091275 ttcggtgggctaagtccatacagagcttgctctggctttaaatggggtccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttga 10091372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 3851844 - 3851940
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| ||||||||||||| |||| ||||||||||||||||||| ||||| |||||||| |||||| ||||||||||||| |||||||||||||||    
T  3851844 ttcggtgggctaagtccatatagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttg 3851940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 17197056 - 17196968
Alignment:
Q  9 gctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| |||||||| |||||| |||| ||||||||||||||||||||||||    
T  17197056 gctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttg 17196968  T

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Target: chr7; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 21835238 - 21835334
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||| |||| |||||||| |||||||||||||||    
T  21835238 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 21835334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 22119975 - 22120071
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||| |||| |||||||| |||||||||||||||    
T  22119975 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 22120071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 40543024 - 40542928
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||| |||| |||||||| |||||||||||||||    
T  40543024 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 40542928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 654818 - 654723
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| |||||||||||||||||||  |||||||||||| |||||| |||| |||||||| |||||||| ||||||    
T  654818 ttcggtgggctaagtccatacagagcttgctctggctttaaacgggcccccgcaagtgggcggtgggattggtcccctcggattagtcggttcttg 654723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 39145766 - 39145659
Alignment:
Q  1 ttcggtaggctaagtccata-cagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaac 99  Q
    |||||| ||||||||| ||| ||||| |||||||||||||||||||  ||| ||||||||||||||| |||| ||||||||||||||||||||||||||     
T  39145766 ttcggtgggctaagtcaataacagagcttgctctggctttaaacgggcccctgcaagtggacggtgggattggtcccctcgaattagtcgattcttgaat 39145667  T
Q  100 caaatacc 107  Q
    || |||||    
T  39145666 cagatacc 39145659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 31274008 - 31274118
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaaccaaatacc 107  Q
    |||||||||||||||||| ||||||||||||||||||| || |||||||||| | |||  |||| |||||||||||||||||||||||| |||  |||||    
T  31274008 ggctaagtccatacagagcttgctctggctttaaacggggctccgcaagtgggcagtgagattggtcccctcgaattagtcgattcttggaccggatacc 31274107  T
Q  108 gaatcttcaaa 118  Q
    || | ||||||    
T  31274108 gagttttcaaa 31274118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 23092183 - 23092276
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattc 93  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||||||| |||||||||| |||| |||||||| ||||||||||||    
T  23092183 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaaatggacggtgggattggtcccctcggattagtcgattc 23092276  T

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Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 2751358 - 2751454
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||||||| ||| |||||| |||| |||||||| |||||||||||||||    
T  2751358 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttg 2751454  T

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Target: chr7; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 7175976 - 7175880
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaac-ggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||| ||  |||||||||||| |||||| |||| |||||||| |||||||||||||||    
T  7175976 ttcggtgggctaagtccatacagagcttgctctggctttaaacaggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 7175880  T

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Target: chr7; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 7275364 - 7275460
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaac-ggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||| ||  |||||||||||| |||||| |||| |||||||| |||||||||||||||    
T  7275364 ttcggtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 7275460  T

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Target: chr7; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 11997936 - 11998032
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| ||||||||||||||| || ||||||||||||||||| | ||||| |||||||| |||||| |||| ||||||||||||||||||||||||    
T  11997936 ttcggttggctaagtccatacatagcttgctctggctttaaactgggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttg 11998032  T

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Target: chr7; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 27009446 - 27009543
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc-gc-aagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| |||||||| |||||||||| ||||| || ||||||||||||| |||| ||||||| ||||||||||||||||    
T  27009446 ttcggtgggctaagtccatacagagcttgctctgactttaaacggggcccctgcaaagtggacggtgggattggtcccctcaaattagtcgattcttg 27009543  T

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Target: chr7; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 18044194 - 18044290
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||| |||||||  |||||||||| |||||||  |||||||||||||||    
T  18044194 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccacaagtgggtggtggaattggtcccctcagattagtcgattcttg 18044290  T

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Target: chr7; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 22703573 - 22703668
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaac-ggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattctt 95  Q
    |||||| ||||||||||||||| || ||||||||||||||||| ||  |||||||||||| |||||| |||| |||||||| ||||||||||||||    
T  22703573 ttcggtgggctaagtccatacaaagcttgctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattctt 22703668  T

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Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 33137931 - 33137844
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattctt 95  Q
    |||||||||||||||||| | ||||| |||||||| || |||| |||||||| ||||| ||||| |||||||||||||||||||||||    
T  33137931 ggctaagtccatacagagctcgctctagctttaaatggggccctgcaagtgggcggtgaaattggtcccctcgaattagtcgattctt 33137844  T

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Target: chr7; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 16374081 - 16374177
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| || |||||||||||||| |||||| |||||||||||||  |||| |||| |||||||||| |||| |||||||| |||||||||||||||    
T  16374081 ttcggtgggttaagtccatacagaatttgctatggctttaaacgggacccccgcaaatggacggtgggattggtcccctcggattagtcgattcttg 16374177  T

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Target: chr7; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 21217947 - 21217851
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaac-ggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||| ||||||||| ||  |||| ||||||| |||||| ||||||||||||| |||||| ||||||||    
T  21217947 ttcggtgggctaagtccatacagagcttgctctagctttaaacgggccccccacaagtgggcggtgggattgatcccctcggattagttgattcttg 21217851  T

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Target: chr7; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 22638395 - 22638471
Alignment:
Q  21 cagagtttgctctggctttaaacggtgcc-ccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||| ||||||||||||||||||| ||| |||||||||| |||||| ||||||| |||||||||||||||||||||    
T  22638395 cagagcttgctctggctttaaacggggcctccgcaagtgggcggtgggattgatctcctcgaattagtcgattcttg 22638471  T

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Target: chr7; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 27704089 - 27704197
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaacc 100  Q
    |||||| ||||||||||||| |||| ||||| |||||||||| ||  ||||||||||||  ||||  ||||||||||||  ||||||||||||||||| |    
T  27704089 ttcggtgggctaagtccatagagagcttgctttggctttaaatggacccccgcaagtgggtggtgtgattgatcccctcagattagtcgattcttgaatc 27704188  T
Q  101 aaataccga 109  Q
    | |||||||    
T  27704189 agataccga 27704197  T

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Target: chr7; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 22643456 - 22643361
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccc-cgcaagtggacggtggaattgatcccctcgaattagtcgattctt 95  Q
    ||||||||||||||||||||||||| |||||||| |||||||||| |||| ||||||||| |||||  |||  |||||||| |||| |||||||||    
T  22643456 ttcggtaggctaagtccatacagagcttgctctgactttaaacggagccctcgcaagtggccggtgtgattagtcccctcggattaatcgattctt 22643361  T

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Target: chr7; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 19421325 - 19421427
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtgc-cccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaaccaaatac 106  Q
    |||||||||||||||||| |||||||| ||||||| || || ||| ||||||| |||||| |||| || ||||| ||||||||||||||||| || ||||    
T  19421325 ggctaagtccatacagagcttgctctgactttaaatggggcgcccacaagtgggcggtgggattggtctcctcggattagtcgattcttgaatcagatac 19421424  T
Q  107 cga 109  Q
    |||    
T  19421425 cga 19421427  T

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Target: chr7; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 2103142 - 2103234
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattc 93  Q
    |||||| |||||||||||||||||| |||||||||||||||| || | |||||||||||| |||||| |||| | |||||| ||||||||||||    
T  2103142 ttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccgcaagtgggcggtgggattggt-ccctcggattagtcgattc 2103234  T

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Target: chr7; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 23012622 - 23012529
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattc 93  Q
    |||||| |||||||||||||||||| |||||||||||||||| || | |||| ||||||| |||||| |||| |||||||| ||||||| ||||    
T  23012622 ttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccacaagtgggcggtgggattggtcccctcgtattagtcaattc 23012529  T

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Target: chr7; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 42913617 - 42913532
Alignment:
Q  11 taagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattctt 95  Q
    ||||||||||| ||  ||||||||||||||||||| ||||| ||||||||||||||| |||| |||||||| |||||| |||||||    
T  42913617 taagtccatacggaacttgctctggctttaaacggggcccccgcaagtggacggtgggattggtcccctcggattagttgattctt 42913532  T

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Target: chr7; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 17212140 - 17212236
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| |||||||||||| ||||||  |||| |||||||   ||||| |||| |||||||| |||||||||||||||    
T  17212140 ttcggtgggctaagtccatacagagattgctctggcttaaaacgggacccctgcaagtgagtggtgggattggtcccctcggattagtcgattcttg 17212236  T

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Target: chr7; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 9718094 - 9718003
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtgccc-cgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    ||||||||||||| |||| ||||||||||||||||||| |||| | ||| ||  ||||||||||| || |||||||||||||| ||||||||    
T  9718094 ggctaagtccatagagagcttgctctggctttaaacggggccctcacaaatgagcggtggaattggtctcctcgaattagtcggttcttgaa 9718003  T

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Target: chr7; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 21373797 - 21373888
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgat 91  Q
    |||||| ||||||||| |||||||| ||||||||||||||||||| | ||||||||||||||||||  |||| ||| | || ||||||||||    
T  21373797 ttcggtgggctaagtctatacagagcttgctctggctttaaacggggcccccgcaagtggacggtgagattggtcctcacggattagtcgat 21373888  T

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Target: chr7; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 36772417 - 36772322
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattctt 95  Q
    |||||| |||||||| ||||||||| ||||||||||||||||||| | |||||  ||||| ||||||||||  ||| |||| ||||||||||||||    
T  36772417 ttcggtgggctaagttcatacagagcttgctctggctttaaacggggcccccgggagtgggcggtggaattagtcctctcggattagtcgattctt 36772322  T

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Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 31197687 - 31197773
Alignment:
Q  11 taagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||||||||||  ||||||| ||||||||||| ||||| |||||||| |||||| |||| |||||||  |||||||||||||||    
T  31197687 taagtccatacagatcttgctcttgctttaaacggggcccccgcaagtggtcggtgggattggtcccctcagattagtcgattcttg 31197773  T

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Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 43785404 - 43785321
Alignment:
Q  10 ctaagtccatacagagtttgctctggctttaaacggtgcc-ccgcaagtggacggtggaattgatcccctcgaattagtcgatt 92  Q
    |||||||||||||||| || |||||| ||||||||| ||| ||||||||||||||||  |||| |||||| | |||||||||||    
T  43785404 ctaagtccatacagagcttactctggttttaaacggggcctccgcaagtggacggtgagattggtccccttggattagtcgatt 43785321  T

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Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 28089903 - 28090002
Alignment:
Q  1 ttcggtaggctaagtccatacagagt----ttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| ||||||||||||||| |||    |||||||||||||||| ||  |||||||||||| || ||  |||| |||||||| |||||||||||||||    
T  28089903 ttcggtgggctaagtccatacaaagtgagcttgctctggctttaaatgggcccccgcaagtgggcgatgagattggtcccctcggattagtcgattcttg 28090002  T

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Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 27312250 - 27312335
Alignment:
Q  12 aagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||||| |  ||||| |||||||||| ||||| |||||||| |||||| |||| |||||||  |||||||||||||||    
T  27312250 aagtccatacagagctacctctgactttaaacggagcccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttg 27312335  T

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Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 41907620 - 41907532
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacg-gtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||||||||| |||||||||||||||||| |  ||||||||||||  ||||| |||| ||||| |  |||||||||||||||    
T  41907620 ggctaagtccatacagaggttgctctggctttaaacgtggcccccgcaagtgggtggtgggattggtcccc-cagattagtcgattcttg 41907532  T

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Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 9683913 - 9684009
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||| ||| || |||||||||||||||| | |||| ||||||| |||| | || | |||||||| |||| ||||||||||    
T  9683913 ttcggtgggctaagtccataccgagcttactctggctttaaacggggtccccacaagtgggcggtaggataggtcccctcggattaatcgattcttg 9684009  T

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Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 28950958 - 28951054
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaac-ggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||| |||| |||| ||||||||||||||||| ||| || ||||||| | |||||| |||| |||||||||| ||| | |||||||    
T  28950958 ttcggtgggctaagttcatatagagcttgctctggctttaaacgggtccctcgcaagtcggcggtgggattggtcccctcgaactagacaattcttg 28951054  T

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Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 13332537 - 13332475
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggt 64  Q
    |||||| |||||||||||||||||| || |||||||||||||| | ||||||||||||| ||||    
T  13332537 ttcggtgggctaagtccatacagagcttactctggctttaaacag-gccccgcaagtggccggt 13332475  T

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Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 31713006 - 31712920
Alignment:
Q  11 taagtccatacagagtttgctctggctttaaacggtgccc-cgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||||||||  | || |||||||||||| |||  ||| ||||||||| |||||| |||| |||||||| |||||||||||||||    
T  31713006 taagtccatacaacgcttactctggctttaagcgggaccctcgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 31712920  T

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Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 8943502 - 8943419
Alignment:
Q  15 tccatacagagtttgctctggctttaaacggtgcccc--gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||||||| ||| ||||| |||||||||  ||||  |||||||| |||||  |||| |||||| |||||||||||||||||    
T  8943502 tccatacagagcttggtctggttttaaacgggcccccccgcaagtgggcggtgtgattggtccccttgaattagtcgattcttg 8943419  T

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Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 14199773 - 14199722
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtgg 59  Q
    ||||||||| ||| |||| |||||||| |||||||||| |||||||||||||    
T  14199773 ggctaagtctatatagagcttgctctgcctttaaacggggccccgcaagtgg 14199722  T

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Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 2344393 - 2344475
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaac-ggtgccccgcaagtggacggtggaattgatcccctcgaattagtcg 89  Q
    |||||||||||||||||| ||  | ||||||||||| ||  |||||||||||  |||||| |||| |||||||| ||||||||    
T  2344393 ggctaagtccatacagagctttttttggctttaaacgggacccccgcaagtgagcggtgggattggtcccctcggattagtcg 2344475  T

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Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 11910015 - 11909970
Alignment:
Q  53 caagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    |||||||||||||| |||| ||| ||||||||||||||| ||||||    
T  11910015 caagtggacggtgggattggtcctctcgaattagtcgatccttgaa 11909970  T

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Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 6491701 - 6491745
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtgccccg 52  Q
    |||||| | ||||||||| ||||| ||||||||||||||||||||    
T  6491701 ggctaaattcatacagagcttgctttggctttaaacggtgccccg 6491745  T

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Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 25333538 - 25333586
Alignment:
Q  48 ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||| | |||| |||| |||||||| |||||||||||||||    
T  25333538 ccccgcaagtgggcagtgggattggtcccctcggattagtcgattcttg 25333586  T

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Target: chr6 (Bit Score: 64; Significance: 8e-28; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 3222749 - 3222654
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| |||||||| |||||||||| ||||||||||||| |||||| |||| |||||||| |||||||||||||||    
T  3222749 ttcggtgggctaagtccatacagagcttgctctgtctttaaacggggccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 3222654  T

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Target: chr6; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 11448954 - 11449052
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||| |||| |||||||| |||||||||||||||||    
T  11448954 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaa 11449052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 21148617 - 21148527
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    |||||||||||||||||| |||||||| |||||||||| ||||||||||||| |||||| |||| |||||||| |||||||||||||||||    
T  21148617 ggctaagtccatacagagcttgctctgactttaaacggggccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaa 21148527  T

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Target: chr6; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 654260 - 654168
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgc-cccgcaagtggacggtggaattgatcccctcgaattagtcgatt 92  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| || ||||||||||| |||||| |||| |||||||| |||||||||||    
T  654260 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggctcccgcaagtgggcggtgggattggtcccctcggattagtcgatt 654168  T

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Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 9690752 - 9690656
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccc-cgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| |||| | |||||||||||||| |||| ||| |||| |||||||||||||||    
T  9690752 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggccctcacaagtggacggtgggattggtcctctcggattagtcgattcttg 9690656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 15360212 - 15360116
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||||||| ||| |||||| |||| |||||||| |||||||||||||||    
T  15360212 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttg 15360116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 34147429 - 34147525
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaac-ggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||| ||  |||||||||||| |||||| |||| |||||||| |||||||||||||||    
T  34147429 ttcggtgggctaagtccatacagagcttgctctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 34147525  T

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Target: chr6; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 34160045 - 34160141
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaac-ggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||| ||  |||||||||||| |||||| |||| |||||||| |||||||||||||||    
T  34160045 ttcggtgggctaagtccatacagagcttgctctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 34160141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 12390508 - 12390600
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaac-ggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgatt 92  Q
    |||||| |||||||||||||||||| ||||||||||||||||| ||  |||||||||||| |||||| |||| |||||||| |||||||||||    
T  12390508 ttcggtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaagtgggcggtgggattggtcccctcggattagtcgatt 12390600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 5360185 - 5360090
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacgg-tgccccgcaagtggacggtggaattgatcccctcgaattagtcgattctt 95  Q
    |||||| |||||||||||||||||| |||||||| ||||||||||   |||| ||||||| |||||| |||| |||||||||||||||||||||||    
T  5360185 ttcggtgggctaagtccatacagagcttgctctgactttaaacggaacccccacaagtgggcggtgggattggtcccctcgaattagtcgattctt 5360090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 1345025 - 1345114
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||||||||||| || |||||||||||||||||||  |||| ||||||||||||||| |||| |||||| | |||||||||||||||    
T  1345025 ggctaagtccatacaaagcttgctctggctttaaacgggccccccgcaagtggacggtgggattggtccccttggattagtcgattcttg 1345114  T

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Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 21982427 - 21982339
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||| |||| | |||||| |||||||||||||||    
T  21982427 ggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggt-ccctcggattagtcgattcttg 21982339  T

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Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 17081168 - 17081050
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaac 99  Q
    |||||| |||||||||||||||||| |||||||| ||||||| || | |||||||||||| |||||| |||| ||||||||||| ||| | |||||| |     
T  17081168 ttcggtgggctaagtccatacagagcttgctctgactttaaatggggcccccgcaagtgggcggtgggattggtcccctcgaataagttgtttcttggat 17081069  T
Q  100 caaataccgaatcttcaaa 118  Q
    | |||||||| | ||||||    
T  17081068 cgaataccgagttttcaaa 17081050  T

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Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 28672157 - 28672259
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtgccc-cgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaaccaaatac 106  Q
    |||||||||||||||||| ||| | |||||||||||||  ||| ||||||||| |||||| |||| |||||||| ||||||||||||||| | || ||||    
T  28672157 ggctaagtccatacagagcttgttttggctttaaacgggcccctcgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcagatac 28672256  T
Q  107 cga 109  Q
    |||    
T  28672257 cga 28672259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 9239058 - 9239154
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| || |||||||||| |||| ||||| |||||||||| || ||||| |||||||| |||||| |||| |||||||| |||||||||||||||    
T  9239058 ttcggtgggttaagtccatatagagcttgctttggctttaaatggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 9239154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 11007248 - 11007343
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattctt 95  Q
    |||||| ||||||||||||||| || ||||||| ||||||| ||| ||||| |||||||| |||||| ||||  ||||||| ||||||||||||||    
T  11007248 ttcggtgggctaagtccatacaaagcttgctctagctttaagcggggcccccgcaagtgggcggtgggattggccccctcggattagtcgattctt 11007343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 11840984 - 11841075
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgatt 92  Q
    |||||| || |||||||||||| || ||||| ||| ||||||||| |||||  ||||||||||||| |||  ||||||||||||||||||||    
T  11840984 ttcggtgggttaagtccatacaaagcttgctttggttttaaacggggccccataagtggacggtgggattagtcccctcgaattagtcgatt 11841075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 14504187 - 14504100
Alignment:
Q  11 taagtccatacagagttt-gctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||||||||| |||| ||||||| |||||| || | |||||||||||| |||||| |||||||| ||||||||||||||| ||||    
T  14504187 taagtccatacagtgttttgctctggttttaaatggggtccccgcaagtgggcggtgggattgatcctctcgaattagtcgatccttg 14504100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 17149560 - 17149461
Alignment:
Q  12 aagtccatacagagt-ttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttgaaccaaataccga 109  Q
    ||||||||||||||  ||||| |||||||||| || ||||| ||||||| ||||||| |||| ||||||||||||||||| | |||||| || |||||||    
T  17149560 aagtccatacagagccttgctttggctttaaatggggcccccgcaagtgaacggtgggattggtcccctcgaattagtcggtccttgaatcagataccga 17149461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 9844031 - 9844117
Alignment:
Q  11 taagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||||||||||| ||| ||||||||||||||| | |||| ||||||| |||||  |||| |||| ||| |||||||||||||||    
T  9844031 taagtccatacagagcttgttctggctttaaacggggccccctcaagtgggcggtgagattggtcccttcggattagtcgattcttg 9844117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 33718531 - 33718487
Alignment:
Q  52 gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||    
T  33718531 gcaagtggacggtgggattgatcccctcggattagtcgattcttg 33718487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 85
Target Start/End: Complemental strand, 3418978 - 3418940
Alignment:
Q  47 gccccgcaagtggacggtggaattgatcccctcgaatta 85  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  3418978 gccccgcaagtagacggtggaattgatcccctcgaatta 3418940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 12591727 - 12591764
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacgg 45  Q
    |||||||||||||||||| |||||||||||||||||||    
T  12591727 ggctaagtccatacagagcttgctctggctttaaacgg 12591764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 9208345 - 9208444
Alignment:
Q  12 aagtccatacagagt-ttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttgaaccaaataccga 109  Q
    ||||||||||||||  ||||| |||||||||| || ||||| |||||||| |||||| |||| || ||||  | ||||||||||||| | ||||||||||    
T  9208345 aagtccatacagagccttgctttggctttaaatggggcccccgcaagtgggcggtgggattggtctcctcagaatagtcgattcttggatcaaataccga 9208444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 27866268 - 27866212
Alignment:
Q  49 cccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaaccaaata 105  Q
    ||||||||||| |||||| |||  |||||||||||||||||||| ||| | ||||||    
T  27866268 cccgcaagtgggcggtgggattagtcccctcgaattagtcgatttttggatcaaata 27866212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 5e-26; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 4621351 - 4621255
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||| |||| |||||||| |||||||||||||||    
T  4621351 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggtccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 4621255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 15059516 - 15059420
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||  |||| ||||||||||||||||||||||||    
T  15059516 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggtccccgcaagtgggcggtgagattggtcccctcgaattagtcgattcttg 15059420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 24122106 - 24122202
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgc-cccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| || ||||||||||| |||||| |||| |||||||| |||||||||||||||    
T  24122106 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 24122202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 24674476 - 24674572
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||| |||| |||||||| |||||||||||||||    
T  24674476 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgtattagtcgattcttg 24674572  T

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Target: chr1; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 7766841 - 7766743
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    |||||| |||||||||||||||||| |||||||| |||||||||| ||||| |||||||| |||||| |||| |||||||| |||||||||||||||||    
T  7766841 ttcggtgggctaagtccatacagagcttgctctgactttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaa 7766743  T

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Target: chr1; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 8254866 - 8254768
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    |||||| |||||||| ||||||||  ||||||||||||||||||| ||||| |||||||| |||||| ||||||||||| |||||||||||||||||||    
T  8254866 ttcggtgggctaagttcatacagaacttgctctggctttaaacggggcccccgcaagtgggcggtgggattgatccccttgaattagtcgattcttgaa 8254768  T

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Target: chr1; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 18646936 - 18647034
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    |||||| ||||||||| ||||| |||||||||||||||||||||| ||||| | |||||| |||||  |||||||||||||||||||||||||||||||    
T  18646936 ttcggtgggctaagtctatacaaagtttgctctggctttaaacggagcccctgtaagtgggcggtgagattgatcccctcgaattagtcgattcttgaa 18647034  T

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Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 17935852 - 17935948
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||| || ||| |||| ||| |||| |||||||||||||||    
T  17935852 ttcggtgggctaagtccatacagagtttgctctggctttaaacggggcccccgcaagtgggcgatgggattggtccactcggattagtcgattcttg 17935948  T

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Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 1378981 - 1379075
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattctt 95  Q
    |||||| |||||||||||||||||  |||||||||||||||||||  ||||||||||||||||||  |||| |||||||  ||||||||||||||    
T  1378981 ttcggtgggctaagtccatacagaacttgctctggctttaaacgggcccccgcaagtggacggtgagattggtcccctcagattagtcgattctt 1379075  T

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Target: chr1; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 23734199 - 23734298
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg--ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    |||||| |||||||||||||||||||||||| || |||||||||| |  |||||||||||| ||||| ||||| |||||||  |||||||||||||||||    
T  23734199 ttcggtgggctaagtccatacagagtttgctatgcctttaaacggggccccccgcaagtgggcggtgaaattggtcccctcagattagtcgattcttgaa 23734298  T

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Target: chr1; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 23741391 - 23741490
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg--ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    |||||| |||||||||||||||||||||||| || |||||||||| |  |||||||||||| ||||| ||||| |||||||  |||||||||||||||||    
T  23741391 ttcggtgggctaagtccatacagagtttgctatgcctttaaacggggccccccgcaagtgggcggtgaaattggtcccctcagattagtcgattcttgaa 23741490  T

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Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 45331736 - 45331637
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg--ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    |||||| |||||||||||||||||| ||||| ||||||||||||| |  ||||||||||||||||||| ||| ||||||||  |||| ||||||||||||    
T  45331736 ttcggtgggctaagtccatacagagcttgctttggctttaaacggggctccccgcaagtggacggtgggattaatcccctcagattaatcgattcttgaa 45331637  T

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Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 33905624 - 33905529
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcc-ccgcaagtggacggtggaattgatcccctcgaattagtcgattctt 95  Q
    |||||| || ||||||||||||||||||| ||||||||||||||| ||| ||| ||||||||||||| |||||||||||| ||||  |||||||||    
T  33905624 ttcggtgggttaagtccatacagagtttgttctggctttaaacggggcctccgtaagtggacggtgggattgatcccctcaaatttatcgattctt 33905529  T

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Target: chr1; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 34778436 - 34778518
Alignment:
Q  15 tccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||||||||||||| ||||||||||||| ||||| ||||||||||||||| |||| |||||| | |||||||||||||||    
T  34778436 tccatacagagtttgctttggctttaaacggggcccccgcaagtggacggtgggattggtccccttggattagtcgattcttg 34778518  T

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Target: chr1; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 8077730 - 8077811
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaac-ggtgccccgcaagtggacggtggaattgatcccctcga 81  Q
    |||||| |||||||||||||||||| ||||||||||||||||| ||  |||||||||||| |||||| |||| |||||||||    
T  8077730 ttcggtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaagtgggcggtgggattggtcccctcga 8077811  T

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Target: chr1; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 40802171 - 40802074
Alignment:
Q  12 aagtccatacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaaccaaataccga 109  Q
    |||||||||||||| |||||||| ||||||||||  ||||||||||||  ||||  |||| ||| || ||||||||||||||||||| | ||||||||    
T  40802171 aagtccatacagagcttgctctgactttaaacgggtccccgcaagtgggtggtgagattggtcctctagaattagtcgattcttgaatcgaataccga 40802074  T

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Target: chr1; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 46607893 - 46607982
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacgg-tgccccgcaagtggacggtggaattgatcccctcgaattagtcg 89  Q
    |||||| |||||||||||||||||| |||||||| ||||||| ||   |||||||||||| |||||| ||||||||||||| ||||||||    
T  46607893 ttcggtgggctaagtccatacagagcttgctctgactttaaaaggcccccccgcaagtgggcggtgggattgatcccctcggattagtcg 46607982  T

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Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 9500469 - 9500373
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||| ||||||| |||||  |||| || | ||| |||||||||||||||    
T  9500469 ttcggtgggctaagtccatacagagcttgctctggctttaaacggagcccccacaagtgggcggtgagattggtctcttcggattagtcgattcttg 9500373  T

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Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 27454972 - 27454882
Alignment:
Q  9 gctaagtccatacagagtttgctctggctttaaacgg---tgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||||||||||||| |||||||||||||||||||     ||||||| |||| |||||| |||| |||||||| |||||||||||||||    
T  27454972 gctaagtccatacagagcttgctctggctttaaacgggccccccccgcatgtgggcggtgggattggtcccctcggattagtcgattcttg 27454882  T

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Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 32930839 - 32930927
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattctt 95  Q
    |||||||||||| ||||| ||||||||||||||||||| | ||| ||||||||| ||||| ||||||||||||  |||| |||||||||    
T  32930839 ggctaagtccatgcagagcttgctctggctttaaacggggtccctgcaagtggatggtgggattgatcccctcagattaatcgattctt 32930927  T

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Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 32729638 - 32729716
Alignment:
Q  12 aagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcg 89  Q
    |||||||||||||| |||||||||||||||| || | |||||||||||| |||||| ||||||||||| | ||||||||    
T  32729638 aagtccatacagagcttgctctggctttaaatggggtccccgcaagtgggcggtgggattgatccccttggattagtcg 32729716  T

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Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 12877038 - 12876965
Alignment:
Q  13 agtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaatta 85  Q
    ||||||||||||| ||||||| ||||||||||| | ||||||||||||||||||| |||| |||||||| ||||    
T  12877038 agtccatacagagcttgctctagctttaaacggggcccccgcaagtggacggtgggattggtcccctcggatta 12876965  T

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Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 30677259 - 30677355
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaa-cggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||| ||||||||||  ||  |||||||||||| |||||| |||| |||||||  |||||||| ||||||    
T  30677259 ttcggtgggctaagtccatacagagcttgctttggctttaaatgggacccccgcaagtgggcggtgggattggtcccctcagattagtcggttcttg 30677355  T

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Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 8779850 - 8779755
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattctt 95  Q
    |||||| ||||||||||||||| || || |||| ||||||||||| | |||| ||||| | |||||| |||| |||||||| ||||||||||||||    
T  8779850 ttcggtgggctaagtccatacacagcttactctagctttaaacggggcccccacaagtaggcggtgggattggtcccctcggattagtcgattctt 8779755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 26820280 - 26820366
Alignment:
Q  11 taagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||||||||||  |||||||| ||||||| ||  |||| ||||||||| ||||||||||||| | ||| |||||||||||||||    
T  26820280 taagtccatacagaacttgctctgcctttaaatgggacccctgcaagtggatggtggaattgatcgcttcggattagtcgattcttg 26820366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 7578492 - 7578584
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccc-cgcaagtggacggtggaattgatcccctcgaattagtcgatt 92  Q
    |||||| ||||||||||||||| || |||||||| |||||||||| |||| |||||||||  ||||| |||| | |||||| |||||| ||||    
T  7578492 ttcggtgggctaagtccatacaaagcttgctctgactttaaacggggccctcgcaagtgggtggtgggattggttccctcggattagttgatt 7578584  T

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Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 2272434 - 2272521
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattct 94  Q
    |||||||| |||||| ||||||||||| |||||||||| |||||  |||| || |||| | ||||||||| ||| |||||||||||||    
T  2272434 ggctaagttcatacaaagtttgctctgactttaaacggggcccctacaagggggcggtaggattgatcccatcggattagtcgattct 2272521  T

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Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 7197351 - 7197268
Alignment:
Q  11 taagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattc 93  Q
    |||||| |||||||  ||||||||||||||||||  ||||| |||||||| |||||  |||| |||||||| ||||||||||||    
T  7197351 taagtcaatacagaccttgctctggctttaaacgaggcccctgcaagtgggcggtgagattggtcccctcggattagtcgattc 7197268  T

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Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 26513244 - 26513153
Alignment:
Q  18 atacagagtttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaaccaaataccga 109  Q
    ||||| || |||||||| ||||||||||  |||| ||||||| |||||| | || |||||||| ||||||||||||||| | | ||||||||    
T  26513244 atacaaagcttgctctgactttaaacgggcccccacaagtgggcggtgggaatggtcccctcggattagtcgattcttggatcgaataccga 26513153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 48699859 - 48699938
Alignment:
Q  19 tacagagtttgctctgg-ctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    ||||||| ||||||||| |||||||||| ||||| |||||||| |||||| |||| |||| ||| |||||||||||||||    
T  48699859 tacagagcttgctctgggctttaaacggagcccccgcaagtgggcggtgggattgttcccttcggattagtcgattcttg 48699938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 7946927 - 7946985
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgccccgcaagtgg 59  Q
    |||||| ||||||||| |||||||| ||||||| |||||||| || |||||||||||||    
T  7946927 ttcggtgggctaagtctatacagagcttgctctcgctttaaatggggccccgcaagtgg 7946985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 23041655 - 23041701
Alignment:
Q  50 ccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||| |||| |||| ||||||||||||||||||||||||    
T  23041655 ccgcaagtggacagtgggattggtcccctcgaattagtcgattcttg 23041701  T

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Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 50202661 - 50202726
Alignment:
Q  33 tggctttaaacggtgccc-cgcaagtggacggtggaattgatcccctcgaattagtcgattcttga 97  Q
    |||||||||||||  ||| ||||||||| ||||||||||| |||||||| |||| |||||||||||    
T  50202661 tggctttaaacgggaccctcgcaagtgggcggtggaattggtcccctcggattaatcgattcttga 50202726  T

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Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 37351538 - 37351478
Alignment:
Q  29 gctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcg 89  Q
    |||||||||||||||||  |||| ||||||| |||||| |||| |||||||| ||||||||    
T  37351538 gctctggctttaaacgggcccccacaagtgggcggtgggattggtcccctcggattagtcg 37351478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 25237093 - 25237014
Alignment:
Q  12 aagtccatacagagttt-gctctggctttaaacggtgcc-ccgcaagtggacggtggaattgatcccctcgaattagtcg 89  Q
    ||||||||||||||||| |||||| |||  || |||||| |||||||||||||||||||||| ||| |||  ||||||||    
T  25237093 aagtccatacagagttttgctctgacttagaatggtgcctccgcaagtggacggtggaattggtcctctcatattagtcg 25237014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 18533829 - 18533743
Alignment:
Q  10 ctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattctt 95  Q
    ||||||||||| |||| ||| |||| |||||||||| ||||| |||||||| | |||| |||| |||||||  |||| |||||||||    
T  18533829 ctaagtccatatagagcttgttctgactttaaacggggcccctgcaagtgggccgtgggattggtcccctcatattaatcgattctt 18533743  T

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Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 21726822 - 21726908
Alignment:
Q  11 taagtccatacagagtttgctctggctttaaacgg-tgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||| |||| ||| ||| ||||||||||| | |||| ||||||| ||||||  |||||||||||  |||| ||||||||||    
T  21726822 taagtccatatagagcttgttctagctttaaacgggtcccccacaagtgggcggtggggttgatcccctcagattaatcgattcttg 21726908  T

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Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 91
Target Start/End: Original strand, 22909975 - 22910045
Alignment:
Q  22 agagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgat 91  Q
    |||| |||||||| |||||||||| ||||| |||||||| |||||| |||  |||||||| ||||||||||    
T  22909975 agagcttgctctgactttaaacggagcccccgcaagtgggcggtgggatttgtcccctcggattagtcgat 22910045  T

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Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 27159205 - 27159259
Alignment:
Q  37 tttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgat 91  Q
    |||||||||  ||||||||||||||||||| |||| |||||||  ||||||||||    
T  27159205 tttaaacgggcccccgcaagtggacggtgggattggtcccctcagattagtcgat 27159259  T

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Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 16539701 - 16539786
Alignment:
Q  12 aagtccatacagag-tttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||||||||||| ||||| |||||||  ||||| |||| | ||||||  ||||| |||| ||||||| ||||||||||| ||||    
T  16539701 aagtccatacagagctttgcgctggcttagaacggggccctgtaagtgggtggtgggattggtcccctcaaattagtcgatacttg 16539786  T

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Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 36156002 - 36155906
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| ||| |||||||| ||||| ||||| | | ||||||| | ||||| ||| |||| |||||| |||| |||| || ||||||||||||||||    
T  36156002 ttcggtgggccaagtccatgcagagcttgctttagttttaaacagggcccccgcaggtgggcggtgggattggtcccttcaaattagtcgattcttg 36155906  T

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Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 45859157 - 45859065
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaac-ggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgatt 92  Q
    |||||| |||||||||||||||  | ||||||| ||||||||| ||  ||||||||||||  ||| | |||| |||||||| |||||| ||||    
T  45859157 ttcggtgggctaagtccatacatcgcttgctcttgctttaaacagggcccccgcaagtgggtggtaggattggtcccctcggattagttgatt 45859065  T

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Target: scaffold0576 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 5196 - 5100
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||||||| ||| |||||| |||| |||||||| |||||||||||||||    
T  5196 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttg 5100  T

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Target: scaffold0217 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 7423 - 7327
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| || |||||||||||||||| | |||||||||||| |||||| |||| |||||||| |||||||||||||||    
T  7423 ttcggtgggctaagtccatacagagctttctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 7327  T

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Target: scaffold0019 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 161892 - 162010
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttgaac 99  Q
    |||||| |||||||||||||||||| ||||||||||||| || || ||||| |||||||| |||||| |||| |||||||| ||||||||||||||| |     
T  161892 ttcggtgggctaagtccatacagagcttgctctggcttttaatggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggat 161991  T
Q  100 caaataccgaatcttcaaa 118  Q
    || ||||||| | ||||||    
T  161992 cagataccgagttttcaaa 162010  T

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Target: scaffold0070 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 40408 - 40503
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||| |||| | |||||| |||||||||||||||    
T  40408 ttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggt-ccctcggattagtcgattcttg 40503  T

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Target: scaffold0102 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 39175 - 39293
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttgaac 99  Q
    |||||| ||||| |||||||||||  ||| ||||||||||||||| ||||| |||||||| |||||| |||| |||||||| ||||||||||||||| |     
T  39175 ttcggtgggctatgtccatacagaacttgttctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggat 39274  T
Q  100 caaataccgaatcttcaaa 118  Q
    || ||||||| | ||||||    
T  39275 cagataccgagttttcaaa 39293  T

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Target: scaffold1175 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 2533 - 2452
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtc 88  Q
    |||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||| |||| |||||||| |||||||    
T  2533 ggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtc 2452  T

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Target: scaffold0068 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 41750 - 41661
Alignment:
Q  9 gctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttga 97  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| |||||||| |  ||| |||| |||||||| ||||||||||||||||    
T  41750 gctaagtccatacagagcttgctctggctttaaacggggcccctgcaagtgggcaatgggattggtcccctcggattagtcgattcttga 41661  T

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Target: scaffold0016 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 32371 - 32468
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacg-gtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttga 97  Q
    |||||| |||||||||||||||||| |||||||||||||||| | |  ||||||||||||  ||||| |||| |||||||| ||||||||||||||||    
T  32371 ttcggtgggctaagtccatacagagcttgctctggctttaaatgtggcccccgcaagtgggtggtgggattggtcccctcggattagtcgattcttga 32468  T

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Target: scaffold0051 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 52985 - 52887
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtg-ccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaa 98  Q
    |||||| ||| || ||||||||||| ||||||||||||||||||| | ||||||| |||| |||| | |||| ||| |||| |||||||||||||||||    
T  52985 ttcggtgggcaaaatccatacagagcttgctctggctttaaacggggcccccgcaggtgggcggtaggattggtcctctcggattagtcgattcttgaa 52887  T

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Target: scaffold0026 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 97480 - 97391
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaac-ggtgccccgcaagtggacggtggaattgatcccctcgaattagtcg 89  Q
    |||||| |||||||||||||||||| |||||||| |||||||| ||  |||||||||||| |||||| |||| ||| |||| ||||||||    
T  97480 ttcggtgggctaagtccatacagagcttgctctgactttaaacgggacccccgcaagtgggcggtgggattggtcctctcgtattagtcg 97391  T

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Target: scaffold0328 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 13158 - 13065
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| || ||||||||||||||| |||||    |||||||||| ||||| ||||||||||||||| ||||||||||||  |||||| ||||||||    
T  13158 ttcggtgggttaagtccatacagagcttgcta---ctttaaacggggcccccgcaagtggacggtgggattgatcccctcagattagttgattcttg 13065  T

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Target: scaffold0328; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 15074 - 15169
Alignment:
Q  1 ttcggtaggctaagtccatacagagtttgctctggctttaaa-cggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttg 96  Q
    |||||| || ||||||||| ||||| ||||||||||||||||  ||  |||||||||||| ||| || |||| || ||||| ||||||| |||||||    
T  15074 ttcggtgggttaagtccatccagagcttgctctggctttaaatgggccccccgcaagtgggcgg-gggattggtctcctcggattagtcaattcttg 15169  T

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Target: scaffold0717 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 65 - 22
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaacggtgcccc 51  Q
    |||||||||||||||||||||||||| ||||||||||| |||||    
T  65 ggctaagtccatacagagtttgctctagctttaaacggggcccc 22  T

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Target: scaffold0049 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 66863 - 66926
Alignment:
Q  27 ttgctctggctttaaacggtgcccc-gcaagtggacggtggaattgatcccctcgaattagtcg 89  Q
    ||||||||||||||||||| ||||| |||||||| |||||| |||| |||||||| ||||||||    
T  66863 ttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcg 66926  T

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Target: scaffold0157 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 20312 - 20413
Alignment:
Q  8 ggctaagtccatacagagtttgctctggctttaaac-ggtgccccgcaagtggacggtggaattgatcccctcgaattagtcgattcttgaaccaaatac 106  Q
    ||||||||||||||| || ||||||||||||||||| ||  |||||||||||| ||||  ||||||| | |||| ||||||| ||||||| |||  ||||    
T  20312 ggctaagtccatacatagcttgctctggctttaaacgggacccccgcaagtgggcggtaaaattgat-ctctcggattagtcaattcttggaccggatac 20410  T
Q  107 cga 109  Q
    |||    
T  20411 cga 20413  T

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Target: scaffold0160 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 29247 - 29169
Alignment:
Q  11 taagtccatacagag-tttgctctggctttaaacggtgccccgcaagtggacggtggaattgatcccctcgaattagtc 88  Q
    ||||||||||||||| ||||||||||||| ||| ||  |||||||| ||||| |||| |||| |||||||  |||||||    
T  29247 taagtccatacagagctttgctctggcttaaaatggacccccgcaaatggacagtgggattggtcccctcagattagtc 29169  T

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