View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16569_low_32 (Length: 432)

Name: NF16569_low_32
Description: NF16569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16569_low_32
NF16569_low_32
[»] chr7 (48 HSPs)
chr7 (2-419)||(28437583-28438000)
chr7 (164-419)||(35618011-35618266)
chr7 (7-161)||(23620839-23620992)
chr7 (5-118)||(34652095-34652208)
chr7 (5-118)||(3658555-3658668)
chr7 (5-118)||(33406676-33406789)
chr7 (6-118)||(3571804-3571916)
chr7 (7-118)||(5968089-5968200)
chr7 (5-118)||(42620396-42620508)
chr7 (5-115)||(47276046-47276156)
chr7 (5-117)||(36747222-36747334)
chr7 (4-118)||(19644225-19644339)
chr7 (5-118)||(33810256-33810369)
chr7 (188-347)||(35617039-35617195)
chr7 (7-118)||(33113685-33113798)
chr7 (5-113)||(7667208-7667316)
chr7 (5-117)||(41002295-41002406)
chr7 (5-112)||(43778620-43778727)
chr7 (5-118)||(43188794-43188907)
chr7 (5-118)||(46449099-46449211)
chr7 (1-118)||(46745627-46745743)
chr7 (1-116)||(44720018-44720130)
chr7 (1-162)||(38137821-38137982)
chr7 (6-73)||(19644137-19644204)
chr7 (1-118)||(38505374-38505491)
chr7 (4-118)||(15748992-15749106)
chr7 (8-113)||(14676152-14676256)
chr7 (2-118)||(19791616-19791730)
chr7 (3-110)||(45940442-45940549)
chr7 (80-164)||(23325720-23325803)
chr7 (2-36)||(6746610-6746644)
chr7 (6-116)||(42219964-42220074)
chr7 (1-53)||(425325-425378)
chr7 (1-86)||(33872151-33872235)
chr7 (1-110)||(43348269-43348377)
chr7 (5-62)||(43665192-43665249)
chr7 (1-53)||(2826287-2826339)
chr7 (1-117)||(43741273-43741388)
chr7 (41-116)||(18788826-18788900)
chr7 (3-53)||(7181751-7181801)
chr7 (7-105)||(31891223-31891321)
chr7 (4-53)||(13697271-13697320)
chr7 (2-51)||(23466038-23466087)
chr7 (75-116)||(23551585-23551626)
chr7 (132-165)||(39091579-39091612)
chr7 (1-109)||(16805607-16805715)
chr7 (1-53)||(20513301-20513353)
chr7 (1-60)||(34399077-34399137)
[»] chr4 (55 HSPs)
chr4 (1-167)||(37756753-37756918)
chr4 (5-118)||(38317273-38317386)
chr4 (5-118)||(41363856-41363969)
chr4 (6-117)||(904122-904233)
chr4 (5-164)||(56504512-56504670)
chr4 (5-118)||(7182235-7182348)
chr4 (5-118)||(16535615-16535728)
chr4 (5-118)||(31529943-31530056)
chr4 (5-166)||(48830858-48831019)
chr4 (5-116)||(17873122-17873234)
chr4 (5-118)||(20533851-20533964)
chr4 (5-118)||(13270318-13270430)
chr4 (5-118)||(24279838-24279951)
chr4 (5-118)||(38365953-38366065)
chr4 (7-103)||(41844374-41844470)
chr4 (5-118)||(21296149-21296262)
chr4 (5-116)||(52594668-52594779)
chr4 (5-104)||(36151414-36151513)
chr4 (6-118)||(13269877-13269989)
chr4 (5-116)||(24287434-24287545)
chr4 (1-118)||(3127051-3127168)
chr4 (5-118)||(32948560-32948674)
chr4 (5-116)||(47669734-47669847)
chr4 (5-94)||(49404667-49404756)
chr4 (5-117)||(17622515-17622619)
chr4 (31-163)||(32651333-32651464)
chr4 (5-114)||(54806403-54806507)
chr4 (1-118)||(35959120-35959237)
chr4 (1-116)||(21730365-21730479)
chr4 (42-113)||(50641984-50642055)
chr4 (51-118)||(32060613-32060680)
chr4 (1-118)||(54205760-54205880)
chr4 (5-59)||(23708129-23708183)
chr4 (1-118)||(45971486-45971601)
chr4 (1-117)||(46176967-46177083)
chr4 (4-118)||(21081274-21081388)
chr4 (1-109)||(28175504-28175612)
chr4 (65-118)||(31187198-31187251)
chr4 (2-118)||(49936439-49936555)
chr4 (1-109)||(12708874-12708982)
chr4 (1-109)||(29114273-29114381)
chr4 (1-118)||(16318541-16318658)
chr4 (36-118)||(30765626-30765708)
chr4 (1-118)||(49668144-49668260)
chr4 (1-53)||(30198811-30198863)
chr4 (1-49)||(42650629-42650677)
chr4 (2-49)||(30307366-30307413)
chr4 (1-32)||(48417640-48417671)
chr4 (1-106)||(25843782-25843885)
chr4 (1-109)||(38136874-38136982)
chr4 (2-51)||(46009086-46009135)
chr4 (1-53)||(31340776-31340828)
chr4 (132-164)||(41363992-41364024)
chr4 (1-113)||(45823484-45823596)
chr4 (1-53)||(46176500-46176552)
[»] chr1 (74 HSPs)
chr1 (5-161)||(33991423-33991578)
chr1 (8-118)||(27499908-27500018)
chr1 (9-118)||(13255268-13255377)
chr1 (5-161)||(23871507-23871662)
chr1 (5-118)||(1688261-1688373)
chr1 (5-118)||(2925978-2926091)
chr1 (5-118)||(26757199-26757312)
chr1 (5-118)||(39889702-39889815)
chr1 (5-118)||(47905733-47905846)
chr1 (5-118)||(17688262-17688377)
chr1 (5-112)||(15463750-15463857)
chr1 (5-118)||(40707240-40707355)
chr1 (1-116)||(51246603-51246718)
chr1 (5-118)||(12293734-12293847)
chr1 (5-118)||(38794894-38795007)
chr1 (1-118)||(42162093-42162210)
chr1 (8-167)||(42488674-42488837)
chr1 (5-118)||(1523518-1523632)
chr1 (8-118)||(30538796-30538906)
chr1 (6-117)||(896540-896651)
chr1 (5-118)||(43571996-43572108)
chr1 (5-118)||(50247519-50247632)
chr1 (5-117)||(938282-938394)
chr1 (5-116)||(8156382-8156494)
chr1 (7-118)||(11017523-11017634)
chr1 (5-118)||(13061440-13061557)
chr1 (42-117)||(32295569-32295644)
chr1 (5-118)||(7401570-7401684)
chr1 (25-118)||(17675122-17675215)
chr1 (5-73)||(47206467-47206535)
chr1 (5-118)||(26940530-26940643)
chr1 (5-108)||(45565061-45565166)
chr1 (5-116)||(2175253-2175366)
chr1 (5-74)||(7963942-7964011)
chr1 (1-118)||(50476470-50476579)
chr1 (5-112)||(28773422-28773530)
chr1 (59-114)||(14152628-14152683)
chr1 (1-115)||(49102992-49103105)
chr1 (1-118)||(5584429-5584546)
chr1 (1-118)||(36269667-36269784)
chr1 (9-118)||(52073496-52073604)
chr1 (6-50)||(32299086-32299130)
chr1 (5-64)||(14153090-14153148)
chr1 (1-164)||(28848829-28848991)
chr1 (1-118)||(41432806-41432920)
chr1 (1-118)||(17556592-17556708)
chr1 (1-118)||(36886794-36886910)
chr1 (5-167)||(39508644-39508807)
chr1 (1-109)||(29092020-29092127)
chr1 (4-106)||(28748137-28748238)
chr1 (1-161)||(7915395-7915554)
chr1 (6-113)||(27102869-27102976)
chr1 (1-109)||(46001500-46001607)
chr1 (26-118)||(50586972-50587063)
chr1 (2-109)||(43036354-43036459)
chr1 (3-53)||(9595564-9595614)
chr1 (2-112)||(17760516-17760626)
chr1 (57-117)||(19403482-19403543)
chr1 (41-118)||(34918811-34918888)
chr1 (1-109)||(41817339-41817446)
chr1 (6-53)||(30543398-30543445)
chr1 (36-103)||(50402704-50402771)
chr1 (8-110)||(23412000-23412101)
chr1 (1-51)||(37649656-37649706)
chr1 (127-161)||(47206562-47206596)
chr1 (57-118)||(5970526-5970587)
chr1 (135-164)||(15464048-15464077)
chr1 (1-118)||(33324558-33324674)
chr1 (1-117)||(47742456-47742573)
chr1 (132-164)||(1278348-1278380)
chr1 (1-53)||(2909107-2909159)
chr1 (138-166)||(33579493-33579521)
chr1 (1-53)||(51303216-51303268)
chr1 (1-53)||(52068177-52068229)
[»] chr3 (67 HSPs)
chr3 (5-164)||(41962021-41962177)
chr3 (5-164)||(36796302-36796460)
chr3 (5-163)||(3043162-3043319)
chr3 (5-118)||(24242136-24242249)
chr3 (7-161)||(55439466-55439619)
chr3 (5-161)||(43237173-43237327)
chr3 (6-163)||(45555507-45555669)
chr3 (5-118)||(49683045-49683158)
chr3 (5-118)||(49860760-49860873)
chr3 (5-118)||(30131930-30132043)
chr3 (5-118)||(47714717-47714829)
chr3 (7-166)||(38515128-38515285)
chr3 (5-118)||(46312465-46312578)
chr3 (9-166)||(33982767-33982923)
chr3 (6-118)||(44412200-44412311)
chr3 (5-118)||(23163448-23163560)
chr3 (5-118)||(38526077-38526190)
chr3 (5-118)||(47789490-47789603)
chr3 (12-164)||(43007547-43007698)
chr3 (24-118)||(34306071-34306165)
chr3 (5-118)||(39499119-39499235)
chr3 (8-118)||(17642514-17642623)
chr3 (5-106)||(31178290-31178391)
chr3 (1-117)||(46017153-46017267)
chr3 (5-118)||(2420589-2420707)
chr3 (6-157)||(25428556-25428704)
chr3 (1-118)||(32858755-32858871)
chr3 (10-106)||(47434368-47434463)
chr3 (1-118)||(3537132-3537249)
chr3 (1-118)||(29623162-29623277)
chr3 (1-118)||(35283012-35283128)
chr3 (5-53)||(24588327-24588375)
chr3 (1-109)||(33944680-33944787)
chr3 (5-118)||(42583328-42583428)
chr3 (54-166)||(42583364-42583480)
chr3 (1-118)||(1132965-1133081)
chr3 (1-52)||(11040868-11040919)
chr3 (3-74)||(48370222-48370292)
chr3 (57-118)||(3707030-3707091)
chr3 (1-113)||(15499339-15499449)
chr3 (2-91)||(40118925-40119014)
chr3 (1-118)||(44400634-44400750)
chr3 (2-118)||(37674181-37674297)
chr3 (1-53)||(44979408-44979460)
chr3 (1-118)||(50948129-50948247)
chr3 (1-43)||(52620865-52620907)
chr3 (1-118)||(53664639-53664756)
chr3 (1-118)||(33908989-33909105)
chr3 (1-53)||(25754142-25754194)
chr3 (1-53)||(38639578-38639630)
chr3 (1-53)||(45570983-45571035)
chr3 (1-112)||(517672-517780)
chr3 (7-106)||(49304165-49304263)
chr3 (132-166)||(32859073-32859107)
chr3 (6-44)||(41677502-41677540)
chr3 (127-161)||(55444977-55445011)
chr3 (132-165)||(11500975-11501008)
chr3 (4-53)||(33281749-33281798)
chr3 (132-164)||(21777455-21777487)
chr3 (1-53)||(21856042-21856094)
chr3 (132-160)||(27922148-27922176)
chr3 (132-164)||(35283321-35283353)
chr3 (41-109)||(42134765-42134833)
chr3 (1-117)||(49855848-49855963)
chr3 (1-53)||(51686496-51686547)
chr3 (132-164)||(53888720-53888752)
chr3 (132-168)||(54372397-54372433)
[»] chr6 (23 HSPs)
chr6 (5-161)||(29241877-29242032)
chr6 (16-118)||(24734806-24734908)
chr6 (5-167)||(4909959-4910119)
chr6 (5-118)||(26574439-26574552)
chr6 (5-166)||(5825210-5825369)
chr6 (7-161)||(1029176-1029328)
chr6 (8-86)||(23095175-23095253)
chr6 (6-118)||(31345415-31345527)
chr6 (5-118)||(26481175-26481284)
chr6 (5-109)||(34914560-34914663)
chr6 (9-118)||(14275910-14276018)
chr6 (1-118)||(26713787-26713904)
chr6 (4-118)||(1567205-1567319)
chr6 (1-109)||(32719416-32719523)
chr6 (69-115)||(15615594-15615640)
chr6 (135-166)||(12779750-12779781)
chr6 (1-112)||(24874975-24875083)
chr6 (4-53)||(13380529-13380579)
chr6 (85-118)||(2365721-2365754)
chr6 (132-165)||(2365777-2365810)
chr6 (17-66)||(2576741-2576790)
chr6 (1-53)||(463059-463111)
chr6 (132-164)||(28551722-28551754)
[»] chr8 (31 HSPs)
chr8 (5-118)||(36906111-36906224)
chr8 (5-118)||(34272439-34272552)
chr8 (5-167)||(29611868-29612028)
chr8 (5-118)||(6742-6856)
chr8 (5-118)||(25033304-25033417)
chr8 (6-118)||(36102935-36103047)
chr8 (5-118)||(37659575-37659688)
chr8 (6-118)||(2474811-2474923)
chr8 (7-118)||(4734542-4734653)
chr8 (1-164)||(31297388-31297549)
chr8 (7-118)||(34304640-34304750)
chr8 (5-117)||(13865136-13865247)
chr8 (6-118)||(3404619-3404730)
chr8 (1-118)||(43733160-43733277)
chr8 (52-118)||(1942124-1942190)
chr8 (47-117)||(34349650-34349719)
chr8 (1-118)||(39193855-39193972)
chr8 (1-60)||(40985114-40985173)
chr8 (1-118)||(79653-79770)
chr8 (1-118)||(1839860-1839976)
chr8 (1-118)||(21173898-21174014)
chr8 (1-118)||(34335966-34336081)
chr8 (1-109)||(23932598-23932705)
chr8 (23-118)||(6839844-6839939)
chr8 (1-118)||(28169801-28169918)
chr8 (1-113)||(41866157-41866268)
chr8 (4-118)||(26772685-26772798)
chr8 (1-118)||(35376667-35376785)
chr8 (3-36)||(12506238-12506271)
chr8 (9-116)||(28517295-28517403)
chr8 (6-94)||(401879-401967)
[»] chr5 (43 HSPs)
chr5 (5-118)||(35700984-35701097)
chr5 (5-161)||(41694859-41695014)
chr5 (9-163)||(38302400-38302554)
chr5 (5-167)||(2020857-2021017)
chr5 (5-161)||(4649031-4649186)
chr5 (6-118)||(38928747-38928859)
chr5 (5-118)||(10295407-10295520)
chr5 (5-153)||(26149492-26149640)
chr5 (5-118)||(1658101-1658214)
chr5 (5-118)||(32760681-32760794)
chr5 (5-118)||(27480216-27480327)
chr5 (5-113)||(37508435-37508544)
chr5 (5-118)||(25026852-25026959)
chr5 (5-158)||(17092783-17092934)
chr5 (5-117)||(35868758-35868867)
chr5 (5-118)||(41638279-41638391)
chr5 (5-118)||(38120219-38120332)
chr5 (1-104)||(6491123-6491225)
chr5 (5-103)||(25598830-25598928)
chr5 (3-116)||(12096834-12096943)
chr5 (1-113)||(5772760-5772871)
chr5 (1-118)||(39649495-39649612)
chr5 (5-118)||(15058489-15058604)
chr5 (2-118)||(35683514-35683630)
chr5 (5-112)||(32750571-32750678)
chr5 (5-108)||(43496442-43496545)
chr5 (57-115)||(6491418-6491476)
chr5 (1-118)||(35708793-35708909)
chr5 (1-109)||(10842978-10843085)
chr5 (1-116)||(19389858-19389971)
chr5 (11-53)||(1978195-1978237)
chr5 (1-113)||(10955730-10955842)
chr5 (39-111)||(15739460-15739533)
chr5 (8-113)||(17668189-17668293)
chr5 (57-117)||(34063724-34063785)
chr5 (1-53)||(9096308-9096360)
chr5 (132-164)||(35708610-35708642)
chr5 (1-53)||(38289305-38289357)
chr5 (1-112)||(43496901-43497010)
chr5 (81-118)||(1978123-1978160)
chr5 (132-165)||(12229299-12229332)
chr5 (1-86)||(38568407-38568492)
chr5 (1-53)||(12229503-12229555)
[»] chr2 (63 HSPs)
chr2 (5-161)||(8555820-8555975)
chr2 (5-163)||(4041844-4042001)
chr2 (1-118)||(30312445-30312562)
chr2 (5-117)||(36567322-36567434)
chr2 (5-118)||(1725834-1725947)
chr2 (5-118)||(18018640-18018753)
chr2 (5-118)||(3038990-3039105)
chr2 (5-117)||(8410974-8411086)
chr2 (5-167)||(18826270-18826437)
chr2 (7-118)||(12964018-12964129)
chr2 (5-118)||(32243399-32243512)
chr2 (8-116)||(25960657-25960765)
chr2 (5-118)||(19382802-19382914)
chr2 (5-109)||(8991007-8991111)
chr2 (5-161)||(13765983-13766137)
chr2 (5-118)||(10165339-10165452)
chr2 (5-118)||(31550293-31550406)
chr2 (5-118)||(18780306-18780421)
chr2 (8-163)||(44020232-44020388)
chr2 (5-117)||(38023490-38023601)
chr2 (5-85)||(40357414-40357494)
chr2 (7-113)||(3119897-3120002)
chr2 (5-86)||(31899387-31899468)
chr2 (6-117)||(14008373-14008483)
chr2 (5-118)||(38293808-38293925)
chr2 (5-116)||(6711873-6711987)
chr2 (43-118)||(44137076-44137151)
chr2 (12-118)||(18561933-18562039)
chr2 (5-109)||(725888-725993)
chr2 (1-118)||(4003352-4003469)
chr2 (1-118)||(36030738-36030854)
chr2 (4-161)||(5322162-5322317)
chr2 (3-118)||(15555388-15555502)
chr2 (1-118)||(1364757-1364874)
chr2 (1-118)||(11514968-11515085)
chr2 (1-118)||(15803113-15803229)
chr2 (1-118)||(16519129-16519245)
chr2 (57-117)||(43333471-43333531)
chr2 (5-74)||(13767397-13767466)
chr2 (1-118)||(21834865-21834982)
chr2 (1-118)||(31082740-31082856)
chr2 (2-51)||(35812338-35812387)
chr2 (5-50)||(43334799-43334844)
chr2 (1-118)||(6656042-6656161)
chr2 (2-53)||(42644646-42644697)
chr2 (1-79)||(43572584-43572661)
chr2 (1-118)||(36870189-36870304)
chr2 (3-116)||(39819825-39819936)
chr2 (135-167)||(21626362-21626394)
chr2 (1-53)||(34757594-34757646)
chr2 (1-53)||(37194256-37194308)
chr2 (21-114)||(16625844-16625934)
chr2 (1-36)||(26599289-26599324)
chr2 (2-53)||(37664567-37664618)
chr2 (1-113)||(26905733-26905845)
chr2 (1-118)||(30072102-30072217)
chr2 (57-114)||(36574517-36574574)
chr2 (4-53)||(40211992-40212041)
chr2 (1-118)||(41100145-41100261)
chr2 (1-53)||(11373799-11373851)
chr2 (135-167)||(13018290-13018322)
chr2 (132-164)||(31083032-31083064)
chr2 (2-117)||(32761318-32761430)
[»] scaffold0028 (1 HSPs)
scaffold0028 (5-118)||(35499-35611)
[»] scaffold0952 (1 HSPs)
scaffold0952 (5-161)||(3715-3871)
[»] scaffold1562 (1 HSPs)
scaffold1562 (5-117)||(63-177)
[»] scaffold1158 (1 HSPs)
scaffold1158 (5-117)||(2416-2530)
[»] scaffold0636 (1 HSPs)
scaffold0636 (6-109)||(8334-8437)
[»] scaffold0717 (1 HSPs)
scaffold0717 (5-73)||(1548-1615)
[»] scaffold0136 (1 HSPs)
scaffold0136 (1-118)||(2063-2179)
[»] scaffold0059 (2 HSPs)
scaffold0059 (43-118)||(67821-67896)
scaffold0059 (43-118)||(75926-76001)
[»] scaffold0013 (1 HSPs)
scaffold0013 (43-118)||(107761-107836)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-118)||(82720-82837)
[»] scaffold0053 (1 HSPs)
scaffold0053 (1-168)||(29120-29285)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-53)||(74730-74782)
[»] scaffold1163 (1 HSPs)
scaffold1163 (59-118)||(1982-2041)
[»] scaffold0248 (1 HSPs)
scaffold0248 (1-112)||(236-346)
[»] scaffold0245 (1 HSPs)
scaffold0245 (132-164)||(4025-4057)
[»] scaffold0229 (1 HSPs)
scaffold0229 (132-164)||(4356-4388)
[»] scaffold0051 (2 HSPs)
scaffold0051 (1-53)||(6797-6849)
scaffold0051 (1-53)||(7780-7832)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-53)||(93546-93598)
[»] scaffold0006 (1 HSPs)
scaffold0006 (132-164)||(59669-59701)


Alignment Details
Target: chr7 (Bit Score: 394; Significance: 0; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 2 - 419
Target Start/End: Original strand, 28437583 - 28438000
Alignment:
Q  2 cctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28437583 cctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttc 28437682  T
Q  102 ttccacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcctaagagtacttcatctgagccgtagcttctagattttgaac 201  Q
    |||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28437683 ttccacttgctccttccttttttttcaaaaccctccccttcaaactcccaaacaaagcctaagagtacttcatctgagccgtagcttctagattttgaac 28437782  T
Q  202 gatcatcagaagagaggtcttcagcttcaggtagaagaatttcatcaaatgctttttccacgagctcaattacattcttcttttcatcatccatatccga 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28437783 gatcatcagaagagaggtcttcagcttcaggtagaagaatttcatcaaatgctttttccacgagctcaattacattcttcttttcatcatccatatccga 28437882  T
Q  302 atctgtttcattataattgtgacaagaagagttgtttcctccattaaacgcgacatcgccttgctctctaccttctttgtccttcccagcaaagggatgc 401  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28437883 atctgtttcattataattgtgacaagaagagttgtttcctccattaaacgcgacatcgccttgctctctaccttctttgtccttcccagcaaagggatgc 28437982  T
Q  402 ttattatcacattttcct 419  Q
    ||||||||||||||||||    
T  28437983 ttattatcacattttcct 28438000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 164 - 419
Target Start/End: Complemental strand, 35618266 - 35618011
Alignment:
Q  164 gagtacttcatctgagccgtagcttctagattttgaacgatcatcagaagagaggtcttcagcttcaggtagaagaatttcatcaaatgctttttccacg 263  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||     
T  35618266 gagtaattcatctgagccgtagcttctagattttgaacgatcatcagaagagaggtcttcagtttcagggagaagaatttcatcaaatgctttttgcaca 35618167  T
Q  264 agctcaattacattcttcttttcatcatccatatccgaatctgtttcattataattgtgacaagaagagttgtttcctccattaaacgcgacatcgcctt 363  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||    
T  35618166 agctcaattacattcttcttttcttcatccatatccgaatctgtttcattataattgtgacaagaagagttgtttcctccattaaacacggcatcacctt 35618067  T
Q  364 gctctctaccttctttgtccttcccagcaaagggatgcttattatcacattttcct 419  Q
    |||||||||||||||||||||||||| ||| |||| ||||||||||| ||||||||    
T  35618066 gctctctaccttctttgtccttcccaacaacgggaagcttattatcatattttcct 35618011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 7 - 161
Target Start/End: Original strand, 23620839 - 23620992
Alignment:
Q  7 aatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttcca 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23620839 aatacaatttttgagttcccccaaatgagggggattttttattataagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttcca 23620938  T
Q  107 cttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcct 161  Q
    ||||||||||||        |||||||||||| | ||||||||||||||||||||    
T  23620939 cttgctccttcc-ttttttccaaaaccctcccttccaaactcccaaacaaagcct 23620992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 34652095 - 34652208
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  34652095 ccaatacaatttttgagttcccccaaatgagggggattttttattataagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttc 34652194  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  34652195 cacttgctccttcc 34652208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 3658555 - 3658668
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  3658555 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacccccaaagctctctcctcccaatgtcttctatttcttc 3658654  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  3658655 cacttgctccttcc 3658668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 33406676 - 33406789
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  33406676 ccaatacaatttttgagttccctcaaatgagggggattttttattatgagtaaaaaattaaccttcaaagccctctcctcccaatgtcttctatttcttc 33406775  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  33406776 cacttgctccttcc 33406789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 3571804 - 3571916
Alignment:
Q  6 caatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttcc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||| ||||||||||    
T  3571804 caatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagtcctctctttccaatgtcttctatttcttcc 3571903  T
Q  106 acttgctccttcc 118  Q
    |||||||||||||    
T  3571904 acttgctccttcc 3571916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 5968089 - 5968200
Alignment:
Q  7 aatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttcca 106  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||    
T  5968089 aatacaatttttgagttcccccaaatgagggggattttttgttatgagtaaaaaattaacctccaaagcgctttcctcccaatgtcttctatttcttcca 5968188  T
Q  107 cttgctccttcc 118  Q
    ||||||||||||    
T  5968189 cttgctccttcc 5968200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 42620396 - 42620508
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  42620396 ccaatacaatttttgagttcccc-aaatgaggggaattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttc 42620494  T
Q  105 cacttgctccttcc 118  Q
    ||||||||| ||||    
T  42620495 cacttgctcattcc 42620508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 47276046 - 47276156
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  47276046 ccaatataatttttgagttcccccaaatgagggggattttttattataagtaaaaaattaacctccaaagccctctcctccaaatgtcttctatttcttc 47276145  T
Q  105 cacttgctcct 115  Q
    || ||||||||    
T  47276146 catttgctcct 47276156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 36747334 - 36747222
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||    
T  36747334 ccaatacaatttttgagatcacccaaatgagggggatttcttattatgagtaaaaaattaacctccaaaaccctctccttccaatgtcttctatttcttc 36747235  T
Q  105 cacttgctccttc 117  Q
    |||||||||||||    
T  36747234 cacttgctccttc 36747222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 19644339 - 19644225
Alignment:
Q  4 tccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttctt 103  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||||||| ||||||||    
T  19644339 tccaatacaatttttgagttcccctaaataagggggattttttattatgattaaaaaattaacctccaaagctctctcatctcaatgtcttgtatttctt 19644240  T
Q  104 ccacttgctccttcc 118  Q
    |||||||||||||||    
T  19644239 ccacttgctccttcc 19644225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 33810256 - 33810369
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  33810256 ccaatacaatttttgagttctcccaaatgagggggatattttcttatgagtaaaaaattaacctccaaaaccctctcctcccaatgtcttctatttcttc 33810355  T
Q  105 cacttgctccttcc 118  Q
    ||||| || |||||    
T  33810356 cacttacttcttcc 33810369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 188 - 347
Target Start/End: Complemental strand, 35617195 - 35617039
Alignment:
Q  188 tctagattttgaacgatcatcagaagagaggtcttcagcttcaggtagaagaatttcatcaaatgctttttccacgagctcaattacattcttcttttca 287  Q
    ||||||||||||| || | ||||| || ||||||||| ||||||| |||||||| |||||||||||||| | ||| ||||||||||||||||||||||||    
T  35617195 tctagattttgaatgaccctcagaggaaaggtcttcaacttcagggagaagaatctcatcaaatgctttctgcacaagctcaattacattcttcttttca 35617096  T
Q  288 tcatccatatccgaatctgtttcattataattgtgacaagaagagttgtttcctccatta 347  Q
    ||||||||||| |||||||||||| ||||||||   | | |||||||||||||| |||||    
T  35617095 tcatccatatctgaatctgtttcactataattg---cgataagagttgtttccttcatta 35617039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 33113685 - 33113798
Alignment:
Q  7 aatacaatttttgagttcccccaaatgagggggattttttattat---gagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttctt 103  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||   ||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  33113685 aatacaatttttgagttcccc-aaatgagggggatttttttttatcatgagtagaaaattaacctccaaagccctctcctcccaatgtcttctatttctt 33113783  T
Q  104 ccacttgctccttcc 118  Q
    |||||||||||||||    
T  33113784 ccacttgctccttcc 33113798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 7667208 - 7667316
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||   |||| ||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||| |||||||||    
T  7667208 ccaatacaatttttgaagccccctaaatgagggggattttttattattaggaaaaaattaacctccaaagctctctcctcccaatgtcttctatttcttc 7667307  T
Q  105 cacttgctc 113  Q
    |||||||||    
T  7667308 cacttgctc 7667316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 41002295 - 41002406
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||| || ||||| | |||||||||    
T  41002295 ccaatataatttttgagttcccccaaatgaggggaattttttattatgagtaaaaaattaacctccagaaccctctccttccgatgtc-tctatttcttc 41002393  T
Q  105 cacttgctccttc 117  Q
    |||||||||||||    
T  41002394 cacttgctccttc 41002406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 5 - 112
Target Start/End: Original strand, 43778620 - 43778727
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||| ||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||| || |||||||||| |||||||||    
T  43778620 ccaatacaattttttagttccttcaaatgaggggaattttttattatgagtaaaaaattaacctccatagccctcttcttccaatgtcttctatttcttc 43778719  T
Q  105 cacttgct 112  Q
    ||||||||    
T  43778720 cacttgct 43778727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 43188907 - 43188794
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||  |||||||||| |||||| |  |||||||||    
T  43188907 ccaatacaatatttgagttcccccaaatgaggtgaattttttattatgagtaaaaaattaacctccaagaccctctcctctcaatgtttcatatttcttc 43188808  T
Q  105 cacttgctccttcc 118  Q
    | ||||||||||||    
T  43188807 cccttgctccttcc 43188794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 46449211 - 46449099
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||| |||| ||||||| ||||||| | ||||||||||||    
T  46449211 ccaatacaatttttgagttccct-aaatgagggagattttttattatgagtaaaaaattaaccttcaaaaccctctcttcccaatattttttatttcttc 46449113  T
Q  105 cacttgctccttcc 118  Q
    ||||||||| ||||    
T  46449112 cacttgctcattcc 46449099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 46745627 - 46745743
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||  ||||||| |||||||| | || |||||| |||| |||| | ||||||| |||||    
T  46745627 tcctccaatacaatttttgagttcccccaaatgagagggattttgcattatgaataaaaaatcatcccccaaagtcctcccctctc-atgtcttctattt 46745725  T
Q  101 cttccacttgctccttcc 118  Q
     |||||||||||||||||    
T  46745726 tttccacttgctccttcc 46745743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 44720130 - 44720018
Alignment:
Q  1 tcctccaatacaatttttgagttcccc-caaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatt 99  Q
    ||||||||||||||||||||||||||| |||||||| | |||||||||||| |||||||||||||||||||||| |  |||||||    |||||| ||||    
T  44720130 tcctccaatacaatttttgagttcccctcaaatgagagagattttttattacgagtaaaaaattaacctccaaaactatctcctc----tgtcttctatt 44720035  T
Q  100 tcttccacttgctcctt 116  Q
    ||||| |||| ||||||    
T  44720034 tcttctacttactcctt 44720018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 38137982 - 38137821
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctcc-aaagccctctcctcccaatgtcttttatt 99  Q
    ||||||||||||| ||||||| |||||||||||||| ||||||| ||||||||   |||||| ||||||| |||| |||| |||||||||||| |  |||    
T  38137982 tcctccaatacaaattttgagctcccccaaatgaggaggattttgtattatga-agaaaaatgaacctcctaaagtcctcccctcccaatgtcctccatt 38137884  T
Q  100 tcttccacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagccta 162  Q
    |||||||| ||||||||||        |||| || |||||| ||||||| |||||||||||||    
T  38137883 tcttccacgtgctccttcctttttttccaaagccttcccctccaaactcgcaaacaaagccta 38137821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 19644204 - 19644137
Alignment:
Q  6 caatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaa 73  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||    
T  19644204 caatacgatttttgagttcccccaaatgaggggggttttttattatgaggaaaaaattaaccttcaaa 19644137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 38505374 - 38505491
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||  ||||||||||||||||| || |||| ||||||||  ||||  | | || ||||||||||| ||||||| | || | |||||    
T  38505374 tcctccaatacaattttatagttcccccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcccctcccattttcctctattt 38505473  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||||||| ||||    
T  38505474 cttccacttgctcattcc 38505491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 15748992 - 15749106
Alignment:
Q  4 tccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttctt 103  Q
    ||||||||||||||| |||||| |||||||||| || |||| ||||||||  ||||  | | || ||||||| |||  |||||| | |||| ||||||||    
T  15748992 tccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagctctcctctcccattttcttctatttctt 15749091  T
Q  104 ccacttgctccttcc 118  Q
    |||||||||| ||||    
T  15749092 ccacttgctcattcc 15749106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 14676256 - 14676152
Alignment:
Q  8 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccac 107  Q
    ||||||||||||||||||| ||||||||| ||||||  |||||| |   |||||| ||||||||||||| || || | |||| || | ||||||||||||    
T  14676256 atacaatttttgagttcccacaaatgaggaggatttagtattat-aaagaaaaatgaacctccaaagccttccccactcaatctcatatatttcttccac 14676158  T
Q  108 ttgctc 113  Q
    ||||||    
T  14676157 ttgctc 14676152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 19791730 - 19791616
Alignment:
Q  2 cctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttc 101  Q
    ||||||||||||||||| |||| |||||||||||| || |||  ||||||||   |||| ||||||||||||| |||| ||||||| |   || ||||||    
T  19791730 cctccaatacaattttttagtt-ccccaaatgaggtgggtttagtattatga-agaaaagttaacctccaaagtcctcccctcccatttgtttctatttc 19791633  T
Q  102 ttccacttgctccttcc 118  Q
    |||||||||||| ||||    
T  19791632 ttccacttgctcattcc 19791616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 45940442 - 45940549
Alignment:
Q  3 ctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctcc-aaagccctctcctcccaatgtcttttatttc 101  Q
    |||||||||||||||| |||||| |||||||||| || |||| ||||||||   |||| |||||| || |||||||||  |||||| | |||| ||||||    
T  45940442 ctccaatacaattttttagttcctccaaatgaggagggttttgtattatga-agaaaagttaaccccctaaagccctcatctcccattttcttctatttc 45940540  T
Q  102 ttccacttg 110  Q
    |||||||||    
T  45940541 ttccacttg 45940549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 164
Target Start/End: Original strand, 23325720 - 23325803
Alignment:
Q  80 tcctcccaatgtcttttatttcttccacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcctaag 164  Q
    ||||||||||||||| |||||||||||||| ||||||||        ||||||| |||||| ||| |||||||||||||||||||    
T  23325720 tcctcccaatgtcttctatttcttccacttactccttcc-ttttttccaaaaccgtcccctccaatctcccaaacaaagcctaag 23325803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 6746610 - 6746644
Alignment:
Q  2 cctccaatacaatttttgagttcccccaaatgagg 36  Q
    |||||||||||||||||||||||||||||||||||    
T  6746610 cctccaatacaatttttgagttcccccaaatgagg 6746644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 42220074 - 42219964
Alignment:
Q  6 caatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttcc 105  Q
    |||||||||||||||||| | |||||| || | |||||| |||||||| ||||| ||||||  |||||  ||||||||  |||| | || |||||||| |    
T  42220074 caatacaatttttgagtttctccaaataagagagattttatattatgaataaaatattaacgaccaaaatcctctcctaacaatattttctatttctttc 42219975  T
Q  106 acttgctcctt 116  Q
    ||||| |||||    
T  42219974 acttgatcctt 42219964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 425378 - 425325
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttt-tattatga 53  Q
    |||||||||||| ||||||||||||||||||| |||||| ||||| ||||||||    
T  425378 tcctccaatacactttttgagttcccccaaattaggggggtttttgtattatga 425325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 33872151 - 33872235
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctccc 86  Q
    |||||||||||||||| | ||||||||||||||||| || |||  ||||||||   |||| |||||| ||||||||||| ||||||    
T  33872151 tcctccaatacaatttgttagttcccccaaatgaggagggtttagtattatga-agaaaagttaacccccaaagccctcccctccc 33872235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 43348269 - 43348377
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    ||||| |||||||||||| ||||||||||||| ||| ||||||  ||||||||  ||||| |||||  ||||||| ||| ||||||| | || | |||||    
T  43348269 tcctctaatacaattttttagttcccccaaataaggaggatttagtattatga-aaaaaagttaactcccaaagctctcccctcccattttcctctattt 43348367  T
Q  101 cttccacttg 110  Q
    ||| ||||||    
T  43348368 ctttcacttg 43348377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 43665192 - 43665249
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaat 62  Q
    |||||| |||||||||||| | ||||||||||  ||||||||||||| ||||||||||    
T  43665192 ccaatataatttttgagtttctccaaatgaggtagattttttattataagtaaaaaat 43665249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 2826287 - 2826339
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    |||||||||||||||||| ||||||||||||||||| || |||  ||||||||    
T  2826287 tcctccaatacaattttttagttcccccaaatgaggagggtttagtattatga 2826339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 43741388 - 43741273
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    ||||||||||||| |||| |||| |||||||||| |  | |||| ||||||||  ||||||||||||  |||||||||  ||||| |||||| | |||||    
T  43741388 tcctccaatacaactttttagttaccccaaatgatgaaggttttgtattatgaa-aaaaaattaacccacaaagcccttccctcctaatgtcatctattt 43741290  T
Q  101 cttccacttgctccttc 117  Q
     ||||| ||||| ||||    
T  43741289 attccatttgcttcttc 43741273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 18788900 - 18788826
Alignment:
Q  41 ttttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccacttgctcctt 116  Q
    |||| |||||||||| |||| |||||| |||||| | ||| || ||||||| || |||||||||||||||||||||    
T  18788900 ttttgtattatgagttaaaa-ttaaccaccaaagtcatcttcttccaatgttttctatttcttccacttgctcctt 18788826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 7181801 - 7181751
Alignment:
Q  3 ctccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    ||||||| |||||||||||||||||||||| || || ||||| ||||||||    
T  7181801 ctccaatgcaatttttgagttcccccaaattagaggaattttgtattatga 7181751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 105
Target Start/End: Complemental strand, 31891321 - 31891223
Alignment:
Q  7 aatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttcc 105  Q
    ||||||| |||| ||||||||||| ||||  | ||||| ||||||||  |||||   |||||||| | ||||||| |||||||||| | ||||||||||    
T  31891321 aatacaagtttttagttcccccaattgagaagcattttgtattatgaagaaaaatgaaacctccataaccctctcatcccaatgtcctctatttcttcc 31891223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 13697320 - 13697271
Alignment:
Q  4 tccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    |||||||||| |||| ||||||||||||||||| || |||| ||||||||    
T  13697320 tccaatacaactttttagttcccccaaatgaggagggttttgtattatga 13697271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 23466038 - 23466087
Alignment:
Q  2 cctccaatacaatttttgagttcccccaaatgagggggattttttattat 51  Q
    ||||||||||||||| ||||||||| ||||||||| || |||| ||||||    
T  23466038 cctccaatacaatttgtgagttccctcaaatgaggagggttttgtattat 23466087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 116
Target Start/End: Complemental strand, 23551626 - 23551585
Alignment:
Q  75 ccctctcctcccaatgtcttttatttcttccacttgctcctt 116  Q
    ||||| |||||||||||| ||||||||||||||||| |||||    
T  23551626 ccctcccctcccaatgtcctttatttcttccacttgttcctt 23551585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 165
Target Start/End: Complemental strand, 39091612 - 39091579
Alignment:
Q  132 ccctccccttcaaactcccaaacaaagcctaaga 165  Q
    ||||||| ||||||||||||||||||||||||||    
T  39091612 ccctccctttcaaactcccaaacaaagcctaaga 39091579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 16805607 - 16805715
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| |||||| |||||||| |  | |||| ||||||||  ||||  | |||| |||||||||||  |||||| | || | | |||    
T  16805607 tcctccaatacaattttttagttcctccaaatgaagaaggttttgtattatgaagaaaagttaaacccccaaagccctcctctcccattttcctctcttt 16805706  T
Q  101 cttccactt 109  Q
    |||||||||    
T  16805707 cttccactt 16805715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 20513353 - 20513301
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    |||||||||||||||||   ||||| |||||| ||||||||||| ||||||||    
T  20513353 tcctccaatacaattttctggttcctccaaattagggggattttgtattatga 20513301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 34399077 - 34399137
Alignment:
Q  1 tcctccaatacaatttttgagtt-cccccaaatgagggggattttttattatgagtaaaaa 60  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||| |||||| || |||||    
T  34399077 tcctccaatgcaatttttgagttccccccaaatgatagggattttgtattataaggaaaaa 34399137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 114; Significance: 1e-57; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 37756753 - 37756918
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  37756753 tcctccaacacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctattt 37756852  T
Q  101 cttccacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcctaagagt 167  Q
    ||||||||||||||||||        ||||| |||||| | ||||||| ||||||||||||||||||    
T  37756853 cttccacttgctccttcc-ttttttccaaaatcctcccatccaaactctcaaacaaagcctaagagt 37756918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 38317273 - 38317386
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38317273 ccaatacaatttttgagttcccccaaatgaggaggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttc 38317372  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  38317373 cacttgctccttcc 38317386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 41363856 - 41363969
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41363856 ccaatacaatttttgagttcccccacatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttc 41363955  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  41363956 cacttgctccttcc 41363969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 6 - 117
Target Start/End: Complemental strand, 904233 - 904122
Alignment:
Q  6 caatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttcc 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  904233 caatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctccgaatgtcttctatttcttcc 904134  T
Q  106 acttgctccttc 117  Q
    ||||||||||||    
T  904133 acttgctccttc 904122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 5 - 164
Target Start/End: Original strand, 56504512 - 56504670
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||     
T  56504512 ccaatacaatttttgagttcccccaaatgagggagattttgtattatgtataaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttg 56504611  T
Q  105 cacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcctaag 164  Q
    ||||||||||||||        ||||||||||||||  ||||||||||||||||||||||    
T  56504612 cacttgctccttcc-tatttttcaaaaccctcccctctaaactcccaaacaaagcctaag 56504670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 7182235 - 7182348
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||| |||||||||    
T  7182235 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaagattaacctccaaagctctctcctctcaatgtcttctatttcttc 7182334  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  7182335 cacttgctccttcc 7182348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 16535728 - 16535615
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16535728 ccaatacaattttttagttcccccaaatgagggatattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttc 16535629  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  16535628 cacttgctccttcc 16535615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 31530056 - 31529943
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||    
T  31530056 ccaatacaatttttgagttcccccaaatgaggaggattttttattatgagtaaaaaattaacctccaaaaccctctcctcccgatgtcttctatttcttc 31529957  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  31529956 cacttgctccttcc 31529943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 5 - 166
Target Start/End: Original strand, 48830858 - 48831019
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgaggg-ggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttctt 103  Q
    |||||||||||||||||||| |||||||||||| || ||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  48830858 ccaatacaatttttgagttctcccaaatgagggaggtttttttatcttgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttctt 48830957  T
Q  104 ccacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcctaagag 166  Q
    |||||||||||||||        |||||||||||||| |||||||||||||||||||| ||||    
T  48830958 ccacttgctccttcc-ttttttccaaaaccctcccctccaaactcccaaacaaagccttagag 48831019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 17873234 - 17873122
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaa-attaacctccaaagccctctcctcccaatgtcttttatttctt 103  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  17873234 ccaatacaatttttgagttcccccaaataagggggattttttattatgagtaaaaagattaacctccaaagccctctcctcccaatgtcttctatttctt 17873135  T
Q  104 ccacttgctcctt 116  Q
    |||||||||||||    
T  17873134 ccacttgctcctt 17873122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 20533964 - 20533851
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||    
T  20533964 ccaatacaatttttgagttcccccaaatgagggagattttttattatgagtaaaaaattaacctccaaagtcttctcctcccaatgtcttctatttcttc 20533865  T
Q  105 cacttgctccttcc 118  Q
    ||||| ||||||||    
T  20533864 cacttactccttcc 20533851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 13270318 - 13270430
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  13270318 ccaatacaatttttgaattcccc-aaatgagggggattttttatcatgagtaaaaaattaacctccaaagccctctactcccaatgtcttctatttcttc 13270416  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  13270417 cacttgctccttcc 13270430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 24279951 - 24279838
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||| | |||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  24279951 ccaatacaatttttgagtttcgccaaatgaagggaattttttattatgagtaaaaaattaacttccaaagccctctcctcccaatgtcttttattccttc 24279852  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  24279851 cacttgctccttcc 24279838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 38366065 - 38365953
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||    
T  38366065 ccaatacaatttttgagttcccc-aaatgagagggattttttattatgagtaaaaaattaacctccaaagtcctctccttccaatgtcttctatttcttc 38365967  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  38365966 cacttgctccttcc 38365953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 41844470 - 41844374
Alignment:
Q  7 aatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttctt 103  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41844470 aatacaatttttgagttcccccaaatgagggagattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttctt 41844374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 21296149 - 21296262
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||| |||||||||    
T  21296149 ccaatacaatttttgagttctcccaaataagggggattttttattatgagtaaaaaattaacctacaaagtcctttcctcccaatgtcttctatttcttc 21296248  T
Q  105 cacttgctccttcc 118  Q
    ||||| ||||||||    
T  21296249 cacttactccttcc 21296262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 52594668 - 52594779
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||    
T  52594668 ccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaacctccaaaaccctctccttccaatgtcttctatttcttc 52594767  T
Q  105 cacttgctcctt 116  Q
     |||| ||||||    
T  52594768 aacttactcctt 52594779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 36151414 - 36151513
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||    
T  36151414 ccaatacaatttttgagttcccccaaattaaggggattttttattatgagtaaaaaattaacctccaaagccctcccctcccaatggcttctatttcttc 36151513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 6 - 118
Target Start/End: Complemental strand, 13269989 - 13269877
Alignment:
Q  6 caatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttcc 105  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||  ||||||||||||| |||||||||||| || | ||||||| ||||||||||    
T  13269989 caatacaatttttgagttctcccaaatgagggagattttttattatgaagaaaaaattaaccttcaaagccctctcttcacgatgtcttctatttcttcc 13269890  T
Q  106 acttgctccttcc 118  Q
    |||||||||||||    
T  13269889 acttgctccttcc 13269877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 24287545 - 24287434
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||| || ||||| ||||| ||||||| ||||||||| ||||    
T  24287545 ccaatacaatttttgagttctcccaaataagggaaattttttattatgagtaaaaaattaacatcgaaagctctctcttcccaatatcttttattccttc 24287446  T
Q  105 cacttgctcctt 116  Q
    ||||||||||||    
T  24287445 cacttgctcctt 24287434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 3127051 - 3127168
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaa-aattaacctccaaagccctctcctcccaatgtcttttatt 99  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||| |||||||||||||||||||| | || ||||||||| ||||    
T  3127051 tcctccaatacaatttttgagttcccccaaatgagagg-attttttgttatgagtaaaaaaattaacctccaaagccctcacttctcaatgtcttctatt 3127149  T
Q  100 tcttccacttgctccttcc 118  Q
    |||| || |||||||||||    
T  3127150 tctttcatttgctccttcc 3127168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 32948560 - 32948674
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggatttt-ttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttctt 103  Q
    |||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| |||||||  |||| ||||||||| |||||||||| ||||||||    
T  32948560 ccaatacaatttttgagttccctcaaatgaaggggatttttttattatgagtaaaagattaaccatcaaaaccctctccttccaatgtcttctatttctt 32948659  T
Q  104 ccacttgctccttcc 118  Q
     ||||||||||||||    
T  32948660 tcacttgctccttcc 32948674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 47669847 - 47669734
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaa--ttaacctccaaagccctctcctcccaatgtcttttatttct 102  Q
    ||||||||||||||||||||| ||||||||||| | |||||||||||||| ||||||  |||||||| ||||||||||||||||||| |||| ||||| |    
T  47669847 ccaatacaatttttgagttcctccaaatgagggaggttttttattatgaggaaaaaaaattaacctcaaaagccctctcctcccaatatcttctattttt 47669748  T
Q  103 tccacttgctcctt 116  Q
    ||||||||||||||    
T  47669747 tccacttgctcctt 47669734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 49404667 - 49404756
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtctt 94  Q
    ||||||||| ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  49404667 ccaatacaaattttgagttcccccaaatgagagaaattttttattatgagtaaaaaattaacctccaaagctctctcctccaaatgtctt 49404756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 17622515 - 17622619
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||||||||||| | |  |||||||||||||||||||||||||||||||||||||        |||||||| |||||||||    
T  17622515 ccaatacaatttttgagttcccccaaatgagagaggctttttattatgagtaaaaaattaacctccaaagccct--------aatgtcttctatttcttc 17622606  T
Q  105 cacttgctccttc 117  Q
    |||||||||||||    
T  17622607 cacttgctccttc 17622619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 31 - 163
Target Start/End: Original strand, 32651333 - 32651464
Alignment:
Q  31 atgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccacttgctccttccnnnnnnnncaaa 130  Q
    ||||| || ||||||||| |||||||||| |||||||||||||||||||||||||||| ||||| || ||||||||||| |||||| |        ||||    
T  32651333 atgagtggaattttttatcatgagtaaaagattaacctccaaagccctctcctcccaacgtcttctaattcttccacttactcctt-ctttttttccaaa 32651431  T
Q  131 accctccccttcaaactcccaaacaaagcctaa 163  Q
    |||||||||| |||||||||||| |||||||||    
T  32651432 accctcccctccaaactcccaaagaaagcctaa 32651464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 54806507 - 54806403
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||| |||||||||||||||| ||||||||||||||    || | ||||||||||| ||||| |||||||||||||||||||||||||||||| ||||    
T  54806507 ccaatataatttttgagttcccc-aaatgagggggatt----atcacgagtaaaaaatgaaccttcaaagccctctcctcccaatgtcttttattccttc 54806413  T
Q  105 cacttgctcc 114  Q
    ||||||||||    
T  54806412 cacttgctcc 54806403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 35959237 - 35959120
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    ||||||||||||| |||| ||||||||||||||||| || |||| ||||||||  ||||| | |||| ||||||||||| |||| ||||||  | |||||    
T  35959237 tcctccaatacaactttttagttcccccaaatgaggagggttttgtattatgaagaaaaattaaacccccaaagccctcccctcacaatgtactctattt 35959138  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||||||||||||    
T  35959137 cttccacttgctccttcc 35959120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 21730365 - 21730479
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||| ||||||||||||||||||| || ||||||| |  |||||||||||| |||||||||||||||| |||||  |||||||| |||| |||| |||||    
T  21730365 tccttcaatacaatttttgagttctcc-aaatgagtgaaattttttattataagtaaaaaattaaccttcaaagttctctcctctcaatatcttctattt 21730463  T
Q  101 cttccacttgctcctt 116  Q
    ||| ||||||||||||    
T  21730464 ctttcacttgctcctt 21730479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 42 - 113
Target Start/End: Complemental strand, 50642055 - 50641984
Alignment:
Q  42 tttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccacttgctc 113  Q
    |||||||||||||||||||||||||||||| | ||||||||| |||||||||| ||||||||||||||||||    
T  50642055 tttttattatgagtaaaaaattaacctccacatccctctccttccaatgtcttctatttcttccacttgctc 50641984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 32060680 - 32060613
Alignment:
Q  51 tgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccacttgctccttcc 118  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||| ||| |||| ||||||||    
T  32060680 tgagtaaaaaactaacctccaaagccctctcctcccaatgtcttctatttattctacttactccttcc 32060613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 54205880 - 54205760
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaa----cctccaaagccctctcctcccaatgtctttt 96  Q
    |||||| ||||||||||||||||||||||||||||| ||||||| | ||||||   |||||| ||    || ||||||||||| |||| ||| ||| | |    
T  54205880 tcctcctatacaatttttgagttcccccaaatgaggaggattttgttttatga-agaaaaatgaacccccccccaaagccctcccctctcaaagtcctct 54205782  T
Q  97 atttcttccacttgctccttcc 118  Q
    ||||||||||||||||||||||    
T  54205781 atttcttccacttgctccttcc 54205760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 23708183 - 23708129
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaa 59  Q
    |||||||||||||||||||||||||||| || | |||||||||||||||||||||    
T  23708183 ccaatacaatttttgagttcccccaaataagtgagattttttattatgagtaaaa 23708129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 45971601 - 45971486
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| |||||||||||||||||||| |||  ||||||||   |||| |||||| ||||| ||||| |||| || | || | |||||    
T  45971601 tcctccaatacaattttttagttcccccaaatgaggggg-tttagtattatga-agaaaagttaacccccaaaaccctcccctctcattttcctctattt 45971504  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||||||| ||||    
T  45971503 cttccacttgctcattcc 45971486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 46176967 - 46177083
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    ||||||||||||| |||| |||||| |||||||||| || |||| |||||| |  ||||| | | || ||||| ||||| |||||||||||  | |||||    
T  46176967 tcctccaatacaactttttagttcctccaaatgaggagggttttgtattattaagaaaaattaaccccccaaaaccctcccctcccaatgtactctattt 46177066  T
Q  101 cttccacttgctccttc 117  Q
    |||||||||| ||||||    
T  46177067 cttccacttgttccttc 46177083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 21081388 - 21081274
Alignment:
Q  4 tccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttctt 103  Q
    ||||||||||||||| |||| |||||||||||| || |||| | ||||||  |||||   | |||||||| |  || |||| ||||||| | ||||||||    
T  21081388 tccaatacaatttttaagttaccccaaatgaggagggttttgttttatgaagaaaaatgaaccctccaaaacattcccctctcaatgtcatctatttctt 21081289  T
Q  104 ccacttgctccttcc 118  Q
    |||||||||||||||    
T  21081288 ccacttgctccttcc 21081274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 28175504 - 28175612
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacct-ccaaagccctctcctcccaatgtcttttatt 99  Q
    |||||| ||||||||||| |||||| |||||||||| ||||||| ||||||||   |||| ||||||| |||||||||||  |||||| | || | ||||    
T  28175504 tcctcctatacaattttttagttcctccaaatgaggaggattttgtattatga-agaaaagttaacctcccaaagccctcctctcccattttcctctatt 28175602  T
Q  100 tcttccactt 109  Q
    ||||||||||    
T  28175603 tcttccactt 28175612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 31187198 - 31187251
Alignment:
Q  65 acctccaaagccctctcctcccaatgtcttttatttcttccacttgctccttcc 118  Q
    ||||||||||||||||||||| ||||||||| |||||||||| ||||| |||||    
T  31187198 acctccaaagccctctcctcctaatgtctttaatttcttccagttgcttcttcc 31187251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 49936555 - 49936439
Alignment:
Q  2 cctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaac-ctccaaagccctctcctcccaatgtcttttattt 100  Q
    ||||||||||||||||| ||||||||||||| ||| ||||||| ||||||||   |||| | ||| | ||||| ||||| |||| ||| ||| |||||||    
T  49936555 cctccaatacaattttttagttcccccaaattaggaggattttgtattatga-agaaaagtgaacaccccaaaaccctcccctctcaaagtcctttattt 49936457  T
Q  101 cttccacttgctccttcc 118  Q
    | |||||||| |||||||    
T  49936456 catccacttgatccttcc 49936439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 12708874 - 12708982
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| |||||| |||||||||| || |||| ||||||||  ||||  | | || |||||||||||  |||||| | || | |||||    
T  12708874 tcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcctctcccattttcctctattt 12708973  T
Q  101 cttccactt 109  Q
    |||||||||    
T  12708974 cttccactt 12708982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 29114273 - 29114381
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| |||||| |||||||||| || |||| ||||||||  ||||  | | || |||||||||||  |||||| | || | |||||    
T  29114273 tcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcctctcccattttcctctattt 29114372  T
Q  101 cttccactt 109  Q
    |||||||||    
T  29114373 cttccactt 29114381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 16318658 - 16318541
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctc-caaagccctctcctcccaatgtcttttatt 99  Q
    |||||||||||||||||| |||||| |||||||||| || |||| || |||||   |||| |||||| |  |||||||||  |||||| | |||| ||||    
T  16318658 tcctccaatacaattttttagttcctccaaatgaggagggttttgtaatatga-agaaaagttaacccctgaaagccctcctctcccattttcttctatt 16318560  T
Q  100 tcttccacttgctccttcc 118  Q
    |||||||||||||| ||||    
T  16318559 tcttccacttgctcattcc 16318541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 30765708 - 30765626
Alignment:
Q  36 ggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccacttgctccttcc 118  Q
    ||||||||| ||| |||| |||||||||||||  ||||  | |||| || |||||| || |||||||||||||||||||||||    
T  30765708 ggggattttgtatcatgaataaaaaattaaccctcaaaatcatctcatctcaatgttttctatttcttccacttgctccttcc 30765626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 49668144 - 49668260
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| |||||||  |||||||| || |||  ||||||||   |||| ||||||||||||||| |  ||||||| | |  | |||||    
T  49668144 tcctccaatacaattttttagttcccttaaatgaggagggtttaatattatga-agaaaagttaacctccaaagccgtaccctcccatttttctctattt 49668242  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||||||| ||||    
T  49668243 cttccacttgctcattcc 49668260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 30198811 - 30198863
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    |||||||||||||||||| |||||| |||||||||| || |||| ||||||||    
T  30198811 tcctccaatacaattttttagttcctccaaatgaggagggttttgtattatga 30198863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 42650677 - 42650629
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttatt 49  Q
    |||||||||||||||||| ||||||||||||||||| || |||| ||||    
T  42650677 tcctccaatacaattttttagttcccccaaatgaggagggttttatatt 42650629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 30307413 - 30307366
Alignment:
Q  2 cctccaatacaatttttgagttcccccaaatgagggggattttttatt 49  Q
    |||| |||||||||||| ||||||||||||||||| ||||||| ||||    
T  30307413 cctcaaatacaattttttagttcccccaaatgaggaggattttatatt 30307366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 48417640 - 48417671
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaat 32  Q
    ||||||||||||||||||||||||||||||||    
T  48417640 tcctccaatacaatttttgagttcccccaaat 48417671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 25843885 - 25843782
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||| |||||||||| |||||||||||  |  |||| |||||||| | ||||||||||| ||||| ||||| ||||| | | || |||| ||    
T  25843885 tcctccaatacactttttgagtttccccaaatgagaagagttttgtattatga-tgaaaaattaacc-ccaaaaccctcacctccaattttcctttactt 25843788  T
Q  101 cttcca 106  Q
    ||||||    
T  25843787 cttcca 25843782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 38136874 - 38136982
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaa-cctccaaagccctctcctcccaatgtcttttatt 99  Q
    |||||||||||||||||| |||||| |||||||||  || |||| ||||||||  ||||| |||| || |||||||||||  || ||| | || | ||||    
T  38136874 tcctccaatacaattttttagttcctccaaatgagaagggttttgtattatga-aaaaaagttaaccccccaaagccctcctcttccattttcctctatt 38136972  T
Q  100 tcttccactt 109  Q
    ||||||||||    
T  38136973 tcttccactt 38136982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 46009086 - 46009135
Alignment:
Q  2 cctccaatacaatttttgagttcccccaaatgagggggattttttattat 51  Q
    ||||||||||| ||||||| ||||||||||| |||| |||||| ||||||    
T  46009086 cctccaatacattttttgatttcccccaaattagggagattttgtattat 46009135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 31340828 - 31340776
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    ||||||||||| |||||||||||||||||||  |||| |||||  ||||||||    
T  31340828 tcctccaataccatttttgagttcccccaaaatagggagatttggtattatga 31340776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 41363992 - 41364024
Alignment:
Q  132 ccctccccttcaaactcccaaacaaagcctaag 164  Q
    ||||||||| |||||||||||||||||||||||    
T  41363992 ccctcccctccaaactcccaaacaaagcctaag 41364024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 45823596 - 45823484
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||| ||||||||||||| |||| |||||||||||| |  |||| ||||||||  ||||  | | |||| ||| ||||  ||||||| | || | |||||    
T  45823596 tccttcaatacaatttttaagtttccccaaatgaggagagttttgtattatgaagaaaagttaaccctctaaaacccttacctcccattttcctctattt 45823497  T
Q  101 cttccacttgctc 113  Q
    |||||||||||||    
T  45823496 cttccacttgctc 45823484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 46176552 - 46176500
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    ||||||||||||||||||  ||||| |||||| | ||||||||| ||||||||    
T  46176552 tcctccaatacaattttttcgttcctccaaattaaggggattttgtattatga 46176500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 4e-57; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 33991578 - 33991423
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33991578 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttc 33991479  T
Q  105 cacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcct 161  Q
    |||||||||||| |        |||||||||||||| | ||||||||||||||||||    
T  33991478 cacttgctcctt-cattttttccaaaaccctcccctcccaactcccaaacaaagcct 33991423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 27500018 - 27499908
Alignment:
Q  8 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccac 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27500018 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccac 27499919  T
Q  108 ttgctccttcc 118  Q
    |||||||||||    
T  27499918 ttgctccttcc 27499908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 13255377 - 13255268
Alignment:
Q  9 tacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccact 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  13255377 tacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccact 13255278  T
Q  109 tgctccttcc 118  Q
    ||||||||||    
T  13255277 tgctccttcc 13255268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 23871507 - 23871662
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||    
T  23871507 ccaatacaatttttgagttcccccaaatgagggagattttttattatgagtaaaaaattaacttccaaagccctctcctctcaatgtcttctatttcttc 23871606  T
Q  105 cacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcct 161  Q
    ||||||||||||||        |||||||||||||| |||||| |||||||||||||    
T  23871607 cacttgctccttcc-ttttttccaaaaccctcccctccaaacttccaaacaaagcct 23871662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 1688261 - 1688373
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1688261 ccaatacaatttttgagttcccc-aaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttc 1688359  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  1688360 cacttgctccttcc 1688373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 2925978 - 2926091
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  2925978 ccaatacaatttttgagttcccccaaatgagggggattttttattataagtaaaaaattaacctccaaagccctctcctcccaatgtcttctattttttc 2926077  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  2926078 cacttgctccttcc 2926091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 26757199 - 26757312
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  26757199 ccaatacaatttttgagttaccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatatcttctatttcttc 26757298  T
Q  105 cacttgctccttcc 118  Q
    || |||||||||||    
T  26757299 catttgctccttcc 26757312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 39889702 - 39889815
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  39889702 ccaatacaatttttgagttcccccaaattagggagattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctattttttc 39889801  T
Q  105 cacttgctccttcc 118  Q
    ||||| ||||||||    
T  39889802 cacttactccttcc 39889815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 47905733 - 47905846
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||    
T  47905733 ccaatacaatttttgagttcccccaaatgaggggaattttttattatgagtaaaaaactaacctccaaaaccctctcctcccaatgtcttctatttcttc 47905832  T
Q  105 cacttgctccttcc 118  Q
    ||||| ||||||||    
T  47905833 cacttactccttcc 47905846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 17688377 - 17688262
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaa--ttaacctccaaagccctctcctcccaatgtcttttatttct 102  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||| || |||||||    
T  17688377 ccaatacaatttttgagttcccccaaatgagggagattttttattatgagtaaaaaaaattaacctccaaagccctctcctcccaatgttttctatttct 17688278  T
Q  103 tccacttgctccttcc 118  Q
    ||||||||||||||||    
T  17688277 tccacttgctccttcc 17688262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 5 - 112
Target Start/End: Complemental strand, 15463857 - 15463750
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  15463857 ccaatacaatttttcagttcccccaaatgagggggattttttattataagtaaaaaattaacctccaaagccctctcctcccaatgacttctatttcttc 15463758  T
Q  105 cacttgct 112  Q
    ||||||||    
T  15463757 cacttgct 15463750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 40707240 - 40707355
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggatttttt-attatgagtaaaa-aattaacctccaaagccctctcctcccaatgtcttttatttct 102  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  40707240 ccaatacaatttttgagttcccccaaatgagagggatttttttattatgagtaaaaaaattaacctccaaagccctctcctcccaatgtcttctatttct 40707339  T
Q  103 tccacttgctccttcc 118  Q
    ||||||||||||||||    
T  40707340 tccacttgctccttcc 40707355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 51246603 - 51246718
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||    
T  51246603 tcctccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaacctctaaagccctttcctcccaatgtcttctattt 51246702  T
Q  101 cttccacttgctcctt 116  Q
    ||| ||||||||||||    
T  51246703 ctttcacttgctcctt 51246718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 12293847 - 12293734
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| | |||| |||||||||    
T  12293847 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaatttaacctccatagccctctcctcccagtttcttctatttcttc 12293748  T
Q  105 cacttgctccttcc 118  Q
    |||||| |||||||    
T  12293747 cacttgatccttcc 12293734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 38795007 - 38794894
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||    
T  38795007 ccaataaaattttgaagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatatcttctattttttc 38794908  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  38794907 cacttgctccttcc 38794894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 42162093 - 42162210
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| | |||||    
T  42162093 tcctccaacacaatatttgagttctcccaaatgagggggattttttattatgagtaaaaaattaacctccaaaaccctctccttccaatgtcatctattt 42162192  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||||||||||||    
T  42162193 cttccacttgctccttcc 42162210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 42488674 - 42488837
Alignment:
Q  8 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccac 107  Q
    |||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  42488674 atacaatttttgagttcccccaaatgagggagattttttatcatcagtaaaaaattaacctccaaaaccctctcctcccaatgtcttctatttcttccac 42488773  T
Q  108 ttgctccttccnnnnnnnncaaaaccctcccctt-----caaactcccaaacaaagcctaagagt 167  Q
    |||||| ||||        |||||||||||||||     |||||||||||||||||||| |||||    
T  42488774 ttgctcattcc-ttttttccaaaaccctccccttccctccaaactcccaaacaaagccttagagt 42488837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 1523632 - 1523518
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggatttttt-attatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttctt 103  Q
    |||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  1523632 ccaatataatttttgagttcccccaaacgagggggatttttttattatgagtaaaaaattaacctccatagccctctcctcccaatgtcttctatttctt 1523533  T
Q  104 ccacttgctccttcc 118  Q
    |||| ||||||||||    
T  1523532 ccacctgctccttcc 1523518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 30538796 - 30538906
Alignment:
Q  8 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccac 107  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||    
T  30538796 atacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaacctccaaaactctctcctcccaatgtcttctatttcttccac 30538895  T
Q  108 ttgctccttcc 118  Q
    || ||||||||    
T  30538896 ttactccttcc 30538906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 6 - 117
Target Start/End: Original strand, 896540 - 896651
Alignment:
Q  6 caatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttcc 105  Q
    ||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||  ||||    
T  896540 caatacaatttttgagttcccccaaatgaaggagattttttactatgagtaaaaaattaacctccaaagccttctcctcccaatatcttttattctttcc 896639  T
Q  106 acttgctccttc 117  Q
    ||||||||||||    
T  896640 acttgctccttc 896651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 43571996 - 43572108
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||| ||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  43571996 ccaatacaatatttgagttcccccaaatgatggaaattttttattatgagtaaaaaattaacctccaaagccctctcct-ccaatgtcttctatttcttc 43572094  T
Q  105 cacttgctccttcc 118  Q
    ||||||||| ||||    
T  43572095 cacttgctcattcc 43572108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 50247632 - 50247519
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||| |||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||    
T  50247632 ccaatacaatctttgagttcccataaatgaggaggattttttattatgagtaaaaaattaacctccaaagccctctccttcgaatgtcttctatttcttc 50247533  T
Q  105 cacttgctccttcc 118  Q
    |||||| |||||||    
T  50247532 cacttgttccttcc 50247519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 938282 - 938394
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||| |||| |||||||||    
T  938282 ccaatataatttttgagttcccccaattgagggagattttttattatgagtaaaaaattaacctccaaaaccctctcctctcaatatcttctatttcttc 938381  T
Q  105 cacttgctccttc 117  Q
    |||||| ||||||    
T  938382 cacttgatccttc 938394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 8156382 - 8156494
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctcc-aaagccctctcctcccaatgtcttttatttctt 103  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||| || ||||||||    
T  8156382 ccaatacaatttttaagttcccccaaatgagggggattttttattataagtaaaaaattaacctccaaaagccctctccttccaatgttttctatttctt 8156481  T
Q  104 ccacttgctcctt 116  Q
     ||||||||||||    
T  8156482 tcacttgctcctt 8156494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 11017634 - 11017523
Alignment:
Q  7 aatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttcca 106  Q
    ||||||||||||||||||||| ||||||| |||| |||||||||||||||||| |||||||||||||||||| | ||| ||||||| | |||||||||||    
T  11017634 aatacaatttttgagttccccaaaatgagagggaatttttattatgagtaaaatattaacctccaaagcccttttctctcaatgtcatatatttcttcca 11017535  T
Q  107 cttgctccttcc 118  Q
    ||||||||||||    
T  11017534 cttgctccttcc 11017523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 13061440 - 13061557
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatga----gtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||| ||    |||||||||||||||||||||||||||| ||| ||||||||  ||||    
T  13061440 ccaatacaatttttgagatcccctaaatgagggggattttttattaggaaggagtaaaaaattaacctccaaagccctctcttccgaatgtcttcaattt 13061539  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||||||||||||    
T  13061540 cttccacttgctccttcc 13061557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 32295644 - 32295569
Alignment:
Q  42 tttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccacttgctccttc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32295644 tttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctccttc 32295569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 7401570 - 7401684
Alignment:
Q  5 ccaatacaatttttgagttcccccaa-atgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttctt 103  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||| ||| | || ||||||||    
T  7401570 ccaatacaatttttgagttccccccatatgagggagattttttattatgagtaaaaaattaatctccaaaaccctctcctcctaatattttctatttctt 7401669  T
Q  104 ccacttgctccttcc 118  Q
    |||| ||||||||||    
T  7401670 ccacctgctccttcc 7401684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 17675215 - 17675122
Alignment:
Q  25 ccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccacttgctccttcc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||| ||| |||||||||||| ||||||||||    
T  17675215 ccccaaatgagggggattttttattatgagtaaaaaattaacctccaaaaccttcttctcccaatgccttctatttcttccacatgctccttcc 17675122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 47206467 - 47206535
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaa 73  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47206467 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaa 47206535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 26940643 - 26940530
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggatttttt-attatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttctt 103  Q
    |||||||| ||||||| |||||| |||||||||| ||||||| ||||||||||||||||||||| || |||| ||||||| |||||||||| ||||||||    
T  26940643 ccaatacattttttgaattcccc-aaatgaggggaatttttttattatgagtaaaaaattaacccccgaagctctctccttccaatgtcttctatttctt 26940545  T
Q  104 ccacttgctccttcc 118  Q
    |||||||||||||||    
T  26940544 ccacttgctccttcc 26940530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 45565166 - 45565061
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaa---agccctctcctcccaatgtcttttatttc 101  Q
    |||||||||||||| |||||| | ||||||||| ||||||||||||||||||||||||||||||||||   ||||||||||| |||||||||| ||||||    
T  45565166 ccaatacaattttttagttcctc-aaatgagggagattttttattatgagtaaaaaattaacctccaaagcagccctctccttccaatgtcttctatttc 45565068  T
Q  102 ttccact 108  Q
    |||||||    
T  45565067 ttccact 45565061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 2175366 - 2175253
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccct----ctcctcccaatgtcttttattt 100  Q
    ||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||| ||||||||    ||||||||||| |||| |||||    
T  2175366 ccaatacaatttttgagttccc--agatgagggggattttttattatgagtaaaaaattaacctcgaaagccctctccctcctcccaatatcttctattt 2175269  T
Q  101 cttccacttgctcctt 116  Q
    ||| ||||| ||||||    
T  2175268 ctttcacttactcctt 2175253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 7964011 - 7963942
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaag 74  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||    
T  7964011 ccaatacaatttttgagttcctccaaatgagggggattttttactatgagtaaaaaattagcctccaaag 7963942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 50476579 - 50476470
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctct-cctcccaatgtcttttatt 99  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||         | |||||||| || ||||||||||| ||||    
T  50476579 tcctccaatacaatttttgagttccctcaaatgagggggattttgtattatgaataaaaaa---------atagccctctcccccccaatgtcttctatt 50476489  T
Q  100 tcttccacttgctccttcc 118  Q
    |||||||||||||||||||    
T  50476488 tcttccacttgctccttcc 50476470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 5 - 112
Target Start/End: Original strand, 28773422 - 28773530
Alignment:
Q  5 ccaatacaatttttgagttccccc-aaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttctt 103  Q
    |||||||||||||| ||||||||| |||  ||||||||||| |||| ||| ||||| ||||||||||| | ||||||||||||||||||||  |||| ||    
T  28773422 ccaatacaattttttagttccccccaaacaagggggattttgtattgtgaataaaagattaacctccataaccctctcctcccaatgtcttcaatttttt 28773521  T
Q  104 ccacttgct 112  Q
    |||| ||||    
T  28773522 ccacatgct 28773530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 14152683 - 14152628
Alignment:
Q  59 aaattaacctccaaagccctctcctcccaatgtcttttatttcttccacttgctcc 114  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  14152683 aaattaacctccaaaaccctctcctcccaatgtcttctatttcttccacttgctcc 14152628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 49102992 - 49103105
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| ||||||||||||||||| || |||| | || |||  |||||   | |||||||||||| |||||||||||||| | |||||    
T  49102992 tcctccaatacaattttttagttcccccaaatgaggagggttttatgttttgaagaaaaataaaccctccaaagccc-ctcctcccaatgtcctctattt 49103090  T
Q  101 cttccacttgctcct 115  Q
    ||||||||| |||||    
T  49103091 cttccacttactcct 49103105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 5584546 - 5584429
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| |||||| |||||||||| || |||| ||||||||  ||||  | | || |||||||||||  |||||| | |||| |||||    
T  5584546 tcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcctctcccattttcttctattt 5584447  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||||||| ||||    
T  5584446 cttccacttgctcattcc 5584429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 36269784 - 36269667
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| ||||||||||||||||| || |||| ||||||||  ||||  | | || ||||||||||| ||||||| | |  | |||||    
T  36269784 tcctccaatacaattttttagttcccccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcccctcccatttttctctattt 36269685  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||||||| ||||    
T  36269684 cttccacttgctcattcc 36269667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 52073496 - 52073604
Alignment:
Q  9 tacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccact 108  Q
    |||||||||||||||||||||||||||| || ||||  |||||||  |||||   |||| |||||||| || |||| ||||||| | |||||||||||||    
T  52073496 tacaatttttgagttcccccaaatgaggagggttttgaattatgaagaaaaatgaaacc-ccaaagccttcccctctcaatgtcatctatttcttccact 52073594  T
Q  109 tgctccttcc 118  Q
    ||||||||||    
T  52073595 tgctccttcc 52073604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 32299130 - 32299086
Alignment:
Q  6 caatacaatttttgagttcccccaaatgagggggattttttatta 50  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  32299130 caatacaatttttgagttcccccaaatgagggggattttttatta 32299086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 14153148 - 14153090
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaatta 64  Q
    ||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||    
T  14153148 ccaatacaatttttgagttccct-aaatgagggagattttttattatgagtaaaaaatta 14153090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 28848829 - 28848991
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||||||||||||||||||||| || |||| | ||||||   |||||| || | |||||||| || | || ||||| | | |||||    
T  28848829 tcctccaatacaatttttgagttcccccaaatgaggagggttttgtgttatga-agaaaaatgaaaccccaaagccttcccgtctcaatgccatctattt 28848927  T
Q  101 cttccacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcctaag 164  Q
    ||||||||| |||||||         |||| ||||||||| ||||||  |||||||||||||||    
T  28848928 cttccactttctccttcatttttttccaaacccctcccctccaaacttgcaaacaaagcctaag 28848991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 41432806 - 41432920
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    ||||||||||||| |||||||| ||||||||||||| || |||| ||||||||  |||||   |||| |||||||| || ||||  |||||| | |||||    
T  41432806 tcctccaatacaaattttgagt-cccccaaatgaggagggttttatattatgaagaaaaatgaaacccccaaagccttcccctc--aatgtcatatattt 41432902  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||||||||||||    
T  41432903 cttccacttgctccttcc 41432920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 17556708 - 17556592
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||| ||||||| ||||||||||||||||| || |||| |||| |||  |||||     || |||||||| ||||||||||||||| | |||||    
T  17556708 tcctccaatagaattttttagttcccccaaatgaggagggttttatattttgaagaaaaataagccccccaaagcc-tctcctcccaatgtcctctattt 17556610  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||| ||||||||    
T  17556609 cttccacttactccttcc 17556592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 36886910 - 36886794
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    ||||||||| |||||||| |||||||| ||||||||||| |||  ||||||||   |||| |||||| ||||||||||| |||| || | || | |||||    
T  36886910 tcctccaatgcaattttttagttccccaaaatgaggggggtttagtattatga-agaaaagttaacccccaaagccctcccctctcattttcctctattt 36886812  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||||||| ||||    
T  36886811 cttccacttgctcattcc 36886794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 167
Target Start/End: Complemental strand, 39508807 - 39508644
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaatta--acctccaaagccctctcctcccaatgtcttttatttct 102  Q
    |||||||||||||| | |||||||||||||| |||||||| ||||| || | ||||||||  |||   |||||| ||||||  |||| |||| |||||||    
T  39508807 ccaatacaattttttaattcccccaaatgagagggattttgtattaagaattaaaaattaatacccaaaaagccttctcctttcaatatcttctatttct 39508708  T
Q  103 tccacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcctaagagt 167  Q
    |||||||| ||| |||         ||||||||||||| |||| ||||||||||||| |||||||    
T  39508707 tccacttgttccatcctcttttct-aaaaccctcccctccaaattcccaaacaaagcataagagt 39508644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 29092127 - 29092020
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| |||||| |||||||||| || |||| ||||||||   |||| |||||| |||||||||||  |||||| | || | |||||    
T  29092127 tcctccaatacaattttttagttcctccaaatgaggagggttttgtattatga-agaaaagttaacccccaaagccctcctctcccattttcctctattt 29092029  T
Q  101 cttccactt 109  Q
    |||||||||    
T  29092028 cttccactt 29092020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 28748238 - 28748137
Alignment:
Q  4 tccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttctt 103  Q
    ||||||||||||||| |||||||    ||||||| |||||| |||||| | ||||||| ||||||| ||| || ||||||| ||||||||| ||||||||    
T  28748238 tccaatacaatttttaagttcccaagtatgagggagattttgtattataaataaaaaaataacctc-aaatccttctcctctcaatgtcttctatttctt 28748140  T
Q  104 cca 106  Q
    |||    
T  28748139 cca 28748137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 7915554 - 7915395
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||||| | |||| |||||||| || || | ||||||||  |||||   | || |||||||||||  ||||||| ||  | |||||    
T  7915554 tcctccaatacaatttttgaatcccccaaaatgaggagggttctatattatgaagaaaaatgaaccccccaaagccctcctctcccaaagttctctattt 7915455  T
Q  101 cttccacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcct 161  Q
     |||||||||||||||||         ||||||||||||| ||||||| ||||||||||||    
T  7915454 tttccacttgctccttccttttttca-aaaaccctcccctccaaactcgcaaacaaagcct 7915395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 27102869 - 27102976
Alignment:
Q  6 caatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacct-ccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||||||| |||||||||| | | ||||| ||||||||   |||||| ||||| ||||||| ||| ||||| ||| |||| ||||||||     
T  27102869 caatacaatttttgagtttccccaaatgaagagcattttgtattatga-agaaaaatgaacctcccaaagcactcccctccaaatatcttctatttcttt 27102967  T
Q  105 cacttgctc 113  Q
    |||||||||    
T  27102968 cacttgctc 27102976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 46001607 - 46001500
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    ||||| |||||||||||| |||||| |||||||||| || |||| ||||||||   |||| |||||||||||| |||||  |||||| | || | |||||    
T  46001607 tcctcaaatacaattttttagttcctccaaatgaggagggttttatattatga-agaaaagttaacctccaaaaccctcctctcccattttcctctattt 46001509  T
Q  101 cttccactt 109  Q
    |||||||||    
T  46001508 cttccactt 46001500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 118
Target Start/End: Complemental strand, 50587063 - 50586972
Alignment:
Q  26 cccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccacttgctccttcc 118  Q
    ||||||||||| ||||||| ||||||||  |||||   | || ||||||||||| |||| ||||||| | |||||||||||||||||||||||    
T  50587063 cccaaatgaggaggattttgtattatgaagaaaaatgaaccccccaaagccctc-cctctcaatgtcctctatttcttccacttgctccttcc 50586972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 43036354 - 43036459
Alignment:
Q  2 cctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttc 101  Q
    ||||||||||||||||| ||||| ||||||||||| || |||| |||| |||  ||||| | | || ||||||||| |||||||||||||  | ||||||    
T  43036354 cctccaatacaattttttagttctcccaaatgaggagggttttatatt-tgaagaaaaattaaccccccaaagccc-ctcctcccaatgtactctatttc 43036451  T
Q  102 ttccactt 109  Q
    ||||||||    
T  43036452 ttccactt 43036459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 9595614 - 9595564
Alignment:
Q  3 ctccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    ||||| |||||||||| ||||||||||||| ||||||||||| ||||||||    
T  9595614 ctccactacaattttttagttcccccaaattagggggattttgtattatga 9595564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 17760516 - 17760626
Alignment:
Q  2 cctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttc 101  Q
    ||||||||||||||||| |||||| |||||||||| || |||| ||||||||  ||||  | | || ||||||| |||  |||||| | || | ||||||    
T  17760516 cctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagctctcctctcccattttcctctatttc 17760615  T
Q  102 ttccacttgct 112  Q
    |||||||||||    
T  17760616 ttccacttgct 17760626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 19403543 - 19403482
Alignment:
Q  57 aaaaattaacctcc-aaagccctctcctcccaatgtcttttatttcttccacttgctccttc 117  Q
    ||||||||||| || ||||||||| ||||||||| || | ||||||||||||||||||||||    
T  19403543 aaaaattaacccccgaaagccctcccctcccaatatcatatatttcttccacttgctccttc 19403482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 34918811 - 34918888
Alignment:
Q  41 ttttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccacttgctccttcc 118  Q
    ||||||||||||| || ||||||||||  |||||   | ||||||||||||||| ||||||||||| |||||| ||||    
T  34918811 ttttttattatgaatagaaaattaaccctcaaagttatttcctcccaatgtcttatatttcttccaattgctcattcc 34918888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 41817339 - 41817446
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| |||||| |||||||| | || |||| ||||||||   |||| |||||| |||||| ||||  |||||| | || | |||||    
T  41817339 tcctccaatacaattttttagttcctccaaatgatgagggttttgtattatga-agaaaagttaacccccaaagtcctcctctcccattttcctctattt 41817437  T
Q  101 cttccactt 109  Q
    |||||||||    
T  41817438 cttccactt 41817446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 30543398 - 30543445
Alignment:
Q  6 caatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    |||||||||||||||||||||||| ||||||  |||||| ||||||||    
T  30543398 caatacaatttttgagttcccccacatgaggaagattttgtattatga 30543445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 50402771 - 50402704
Alignment:
Q  36 ggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttctt 103  Q
    |||||||||||||||| |  |||||||||||||| ||||| |||| ||||| |||||||  |||||||    
T  50402771 ggggattttttattataaacaaaaaattaacctcaaaagctctcttctcccgatgtcttcgatttctt 50402704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 23412000 - 23412101
Alignment:
Q  8 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccac 107  Q
    ||||||||||| |||||| |||||||||| |||||||  |||||||   |||||| |||||| || | | |||||||  |||||| | ||||||||||||    
T  23412000 atacaattttttagttcctccaaatgaggaggattttgaattatga-agaaaaatgaacctcaaaggtcttctcctcttaatgtcatctatttcttccac 23412098  T
Q  108 ttg 110  Q
    |||    
T  23412099 ttg 23412101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 37649656 - 37649706
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattat 51  Q
    |||||||||||||||||| |||||| |||||||||| || |||| ||||||    
T  37649656 tcctccaatacaattttttagttcctccaaatgaggagggttttgtattat 37649706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 47206562 - 47206596
Alignment:
Q  127 caaaaccctccccttcaaactcccaaacaaagcct 161  Q
    |||||||||||||| ||||||||||||||||||||    
T  47206562 caaaaccctcccctccaaactcccaaacaaagcct 47206596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 5970526 - 5970587
Alignment:
Q  57 aaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccacttgctccttcc 118  Q
    ||||||||||| ||||||||||| ||||| |||||  | ||||||||| |||| ||||||||    
T  5970526 aaaaattaacccccaaagccctcccctcctaatgtactctatttcttcaacttactccttcc 5970587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 164
Target Start/End: Original strand, 15464048 - 15464077
Alignment:
Q  135 tccccttcaaactcccaaacaaagcctaag 164  Q
    ||||||||||||||||||||||||||||||    
T  15464048 tccccttcaaactcccaaacaaagcctaag 15464077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 33324674 - 33324558
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    ||||| |||||||||||| ||||||| ||||||||| || |||  ||||||||  ||||  | | || ||||||||||||| ||||| | || | |||||    
T  33324674 tcctctaatacaattttt-agttccctcaaatgaggagggtttagtattatgaagaaaagttaaccccccaaagccctctcttcccattttcctctattt 33324576  T
Q  101 cttccacttgctccttcc 118  Q
    |||| |||||||| ||||    
T  33324575 cttctacttgctcattcc 33324558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 47742573 - 47742456
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagg-gggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatt 99  Q
    ||||||||||||| |||| |||| |||| ||||||| ||| || | ||||| ||  ||||| | | || ||||||||||| | || ||||||| | ||||    
T  47742573 tcctccaatacaactttttagtttccccgaatgaggagggtttatgtattaggaacaaaaattaaccccccaaagccctcccttctcaatgtcctctatt 47742474  T
Q  100 tcttccacttgctccttc 117  Q
    |||||||||| |||||||    
T  47742473 tcttccacttactccttc 47742456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 1278380 - 1278348
Alignment:
Q  132 ccctccccttcaaactcccaaacaaagcctaag 164  Q
    ||||||||| |||||||||||||||||||||||    
T  1278380 ccctcccctccaaactcccaaacaaagcctaag 1278348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 2909159 - 2909107
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    |||||||||||||||||| |||||| |||||||||  || |||| ||||||||    
T  2909159 tcctccaatacaattttttagttcctccaaatgagtagggttttctattatga 2909107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 166
Target Start/End: Original strand, 33579493 - 33579521
Alignment:
Q  138 ccttcaaactcccaaacaaagcctaagag 166  Q
    |||||||||||||||||||||||||||||    
T  33579493 ccttcaaactcccaaacaaagcctaagag 33579521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 51303216 - 51303268
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    ||||| ||| ||||||||||||||| |||||||||| ||||||| | ||||||    
T  51303216 tcctcaaatgcaatttttgagttccaccaaatgaggaggattttatgttatga 51303268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 52068177 - 52068229
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    |||||||||||||||||| |||||| |||||||||| |  |||| ||||||||    
T  52068177 tcctccaatacaattttttagttcctccaaatgaggagagttttgtattatga 52068229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 2e-56; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 5 - 164
Target Start/End: Original strand, 41962021 - 41962177
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41962021 ccaatacaatttttgagttcccccaaatgagggggattttttatt--gagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttc 41962118  T
Q  105 cacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcctaag 164  Q
    ||||||||||||||        |||||||||||||| |||||||||||||||||||||||    
T  41962119 cacttgctccttcc-ttttttccaaaaccctcccctccaaactcccaaacaaagcctaag 41962177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 36796460 - 36796302
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||| |||||||||    
T  36796460 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaaccttcatagtcctctcctcccaatgtcttctatttcttc 36796361  T
Q  105 cacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcctaag 164  Q
    ||||||||||||||        |||||||||||||| |||||||||||||||||||||||    
T  36796360 cacttgctccttcc-ttttttccaaaaccctcccctccaaactcccaaacaaagcctaag 36796302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 5 - 163
Target Start/End: Original strand, 3043162 - 3043319
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  3043162 ccaatacaatttttgagttcccccaaatcagggggattttttattatgagtaaaaaattaacctccaaaggcctctcctcccaatgtcttctatttcttc 3043261  T
Q  105 cacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcctaa 163  Q
    ||||||||||||||        ||||| |||||||| ||||||||||||||||||||||    
T  3043262 cacttgctccttcc-ttttttccaaaatcctcccctccaaactcccaaacaaagcctaa 3043319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 24242136 - 24242249
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  24242136 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagtcctctcctcccaatatcttctatttcttc 24242235  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  24242236 cacttgctccttcc 24242249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 7 - 161
Target Start/End: Complemental strand, 55439619 - 55439466
Alignment:
Q  7 aatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttcca 106  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||    
T  55439619 aatacaatttttgagttcctccaaatgagggggattttttattatgagtaaaaaattaacctccaaagtcctctcctcccaatgtcctctatttcttcca 55439520  T
Q  107 cttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcct 161  Q
    ||||||| ||||        |||||||||||||| ||||||||||||||||||||    
T  55439519 cttgctcattcc-ttttttccaaaaccctcccctccaaactcccaaacaaagcct 55439466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 43237327 - 43237173
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  43237327 ccaatacaattgttgagttcccccaaatgagggg-attttttattatgcgtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttc 43237229  T
Q  105 cacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcct 161  Q
    ||||||||||||||         ||||||||||||| ||||||||||||||||||||    
T  43237228 cacttgctccttccttttttct-aaaaccctcccctccaaactcccaaacaaagcct 43237173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 6 - 163
Target Start/End: Complemental strand, 45555669 - 45555507
Alignment:
Q  6 caatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttcc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||| ||||||||||    
T  45555669 caatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctgtcttcccgatgtcttctatttcttcc 45555570  T
Q  106 acttgctccttccnnnnnnnncaaaaccc-----tccccttcaaactcccaaacaaagcctaa 163  Q
    |||||||||||||        ||||||||     |||||| ||||||||||||||||||||||    
T  45555569 acttgctccttccattttttccaaaaccctcccatcccctccaaactcccaaacaaagcctaa 45555507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 49683045 - 49683158
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||    
T  49683045 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcctaatgtcttctattttttc 49683144  T
Q  105 cacttgctccttcc 118  Q
    ||||||||| ||||    
T  49683145 cacttgctcattcc 49683158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 49860873 - 49860760
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49860873 ccaatacaattttttagttcccccaaatgagggggatttgttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttc 49860774  T
Q  105 cacttgctccttcc 118  Q
    || |||||||||||    
T  49860773 caattgctccttcc 49860760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 30131930 - 30132043
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||| ||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  30131930 ccaatacaatttttgagtttccccagatgagggaaattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttc 30132029  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  30132030 cacttgctccttcc 30132043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 47714717 - 47714829
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  47714717 ccaatacaatttttgagttcccc-aaatgagggagattttttattatgagtaaaaaattaacctccaaagccctctccttccaatgtcttctatttcttc 47714815  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  47714816 cacttgctccttcc 47714829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 7 - 166
Target Start/End: Complemental strand, 38515285 - 38515128
Alignment:
Q  7 aatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttcca 106  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||    
T  38515285 aatacaatttttgagttctcccaaatgagggggattttttattatgagtaaaaaattaacc-ccaaagccctctcctcccaatatcttctatttctttca 38515187  T
Q  107 cttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcctaagag 166  Q
    ||||||||||||        |||||||||||||| |||||| ||||| ||||| ||||||    
T  38515186 cttgctccttcc-tttttaccaaaaccctcccctccaaacttccaaataaagcttaagag 38515128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 46312465 - 46312578
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  46312465 ccaatacaatttttgagttcccccaaatgaggaagatttttcattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttc 46312564  T
Q  105 cacttgctccttcc 118  Q
    |||||  |||||||    
T  46312565 cacttagtccttcc 46312578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 9 - 166
Target Start/End: Original strand, 33982767 - 33982923
Alignment:
Q  9 tacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccact 108  Q
    |||||||||| |||||||||||||||||  |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  33982767 tacaatttttaagttcccccaaatgaggaagattctttattatgagtaaaaaattaacctccaaagtcctctcctcccaatgtcttctatttcttccact 33982866  T
Q  109 tgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcctaagag 166  Q
    ||||||||||        |||||||||||||| |||||| ||||  ||||||||||||    
T  33982867 tgctccttcc-tttttttcaaaaccctcccctccaaacttccaataaaagcctaagag 33982923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 44412200 - 44412311
Alignment:
Q  6 caatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttcc 105  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||    
T  44412200 caatacaatttttgagttccca-aaatgagggggattttttattatgagtaaaaaattaacctccaaaaccctctccttccaatgtcttctatttcttcc 44412298  T
Q  106 acttgctccttcc 118  Q
    |||||||||||||    
T  44412299 acttgctccttcc 44412311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 23163560 - 23163448
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||    
T  23163560 ccaatacaatttttgagttccctcaaatgagggc-attttttattatgagtaaaaaattaacctccaaagccctctcctcctgatgtcttctatttcttc 23163462  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  23163461 cacttgctccttcc 23163448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 38526190 - 38526077
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||    
T  38526190 ccaatacaatttttgagttcccccaaatgagggagattttatattatgagaaaaaaattaacctccaaagccctctccttccaatgtcttctatttcttc 38526091  T
Q  105 cacttgctccttcc 118  Q
    ||||| || |||||    
T  38526090 cacttacttcttcc 38526077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 47789490 - 47789603
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||||| ||||||||  ||||||||||||||||||| ||||||||||||||| |||||||| ||||||||| |||||||||    
T  47789490 ccaatacaatttttgagttcccccagatgaggggatttttttattatgagtaaaagattaacctccaaagctctctcctctcaatgtcttctatttcttc 47789589  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  47789590 cacttgctccttcc 47789603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 12 - 164
Target Start/End: Original strand, 43007547 - 43007698
Alignment:
Q  12 aatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccacttgc 111  Q
    |||||||||||||||||||| |||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  43007547 aatttttgagttcccccaaacgaggaggaatttttattataagtaaaaaattaacctccaaagccctctcctcccaatatcttctatttcttccacttgc 43007646  T
Q  112 tccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcctaag 164  Q
    | |||||        |||||||||||||| |||||| |||||||||| |||||    
T  43007647 tacttcc-ttttttccaaaaccctcccctccaaacttccaaacaaagtctaag 43007698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 34306165 - 34306071
Alignment:
Q  24 cccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccacttgctccttcc 118  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34306165 cccctaaatgagggggattttttatcatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctccttcc 34306071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 39499235 - 39499119
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttat---ttc 101  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||   |||    
T  39499235 ccaatacaatttttgagtttccctaaatgagggagattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatatcttctatatcttc 39499136  T
Q  102 ttccacttgctccttcc 118  Q
    |||||||||||||||||    
T  39499135 ttccacttgctccttcc 39499119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 17642623 - 17642514
Alignment:
Q  8 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccac 107  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||  |||||||||||| ||||||||||||    
T  17642623 atacaatttttgagttcccc-aaatgagggagattttttattatgagtaaaaaattaacctccaaaaccctcttttcccaatgtcttctatttcttccac 17642525  T
Q  108 ttgctccttcc 118  Q
    ||||| |||||    
T  17642524 ttgcttcttcc 17642514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 31178290 - 31178391
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||| ||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||    
T  31178290 ccaatacaatttttaagttctcccaaatgagggagattttttattatgagcaaaaaattaacctccaaagccctctccttccaatgtcttctatttcttc 31178389  T
Q  105 ca 106  Q
    ||    
T  31178390 ca 31178391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 46017267 - 46017153
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||  ||||||||||||||||| | |||||||||||||||||  ||||    
T  46017267 tcctccaatacaatttttgagttctcccaaataaggaggattttttattatgagt--aaaattaacctccaaagtcttctcctcccaatgtcttccattt 46017170  T
Q  101 cttccacttgctccttc 117  Q
    ||| ||||| |||||||    
T  46017169 ctttcacttactccttc 46017153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 2420707 - 2420589
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctc------ccaatgtcttttat 98  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||      ||||||| ||||||    
T  2420707 ccaatacaatttttgagttcccc-aaatgagggagattttttattatgagtaaaaaattaacctccaaaaccctctcatcccaaatccaatgtattttat 2420609  T
Q  99 ttcttccacttgctccttcc 118  Q
    | ||||||||||||||||||    
T  2420608 tacttccacttgctccttcc 2420589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 6 - 157
Target Start/End: Complemental strand, 25428704 - 25428556
Alignment:
Q  6 caatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttcc 105  Q
    ||||| |||||||||||||| | ||||||||| |||||||||||||||||||||| |||| ||||||||| |||||||| |||| |||| ||||||||||    
T  25428704 caatataatttttgagttcctc-aaatgagggagattttttattatgagtaaaaa-ttaatctccaaagcgctctcctctcaatatcttctatttcttcc 25428607  T
Q  106 acttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaa 157  Q
    |||| || ||| |        |||||||||||||| ||||||||||||||||    
T  25428606 acttacttctttc-ttttttccaaaaccctcccctccaaactcccaaacaaa 25428556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 32858871 - 32858755
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    ||||| |||||||||||||||||||||||||||||| ||||||| ||||||||   |||||| |||| |||||||| |  |||| ||||||| | |||||    
T  32858871 tcctcgaatacaatttttgagttcccccaaatgaggaggattttatattatga-agaaaaatgaacccccaaagcctttccctctcaatgtcatctattt 32858773  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||||||| ||||    
T  32858772 cttccacttgctcattcc 32858755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 47434368 - 47434463
Alignment:
Q  10 acaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttcca 106  Q
    |||||||||||||||||| |||||||  |||||||||||||||| ||||||| |||||||||||| | ||||||  ||||||||| |||||||||||    
T  47434368 acaatttttgagttcccc-aaatgagatggattttttattatgaataaaaaactaacctccaaagtcttctcctttcaatgtcttctatttcttcca 47434463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 3537249 - 3537132
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacct-ccaaagccctctcctcccaatgtcttttatt 99  Q
    |||||||||||||||||| ||||||||||||||||| || |||| ||||||||   |||| ||||||| ||||||||||| ||||||| | || | ||||    
T  3537249 tcctccaatacaattttttagttcccccaaatgaggagggttttgtattatga-agaaaagttaacctcccaaagccctcccctcccattttcctctatt 3537151  T
Q  100 tcttccacttgctccttcc 118  Q
    |||||||||| ||| ||||    
T  3537150 tcttccacttactcattcc 3537132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 29623277 - 29623162
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||| |||||||| ||||||||| ||| |||||||| || |||| ||||||||  ||||| ||||||  |||||||||| ||||| |||||| | |||||    
T  29623277 tcctgcaatacaacttttgagtttccc-aaatgaggagggttttgtattatgaagaaaaa-ttaaccatcaaagccctcccctcctaatgtcctctattt 29623180  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||||||||||||    
T  29623179 cttccacttgctccttcc 29623162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 35283128 - 35283012
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| ||||||||||||||||| || |||| |||| |||  ||||| | | || ||||||| | ||||||||||||   | |||||    
T  35283128 tcctccaatacaattttttagttcccccaaatgaggagggttttatattttgaagaaaaattaaccccccaaagctc-ctcctcccaatgatctctattt 35283030  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||||||||||||    
T  35283029 cttccacttgctccttcc 35283012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 24588327 - 24588375
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  24588327 ccaatacaatttttgagttcctccaaatgagggggattttgtattatga 24588375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 33944680 - 33944787
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| |||||| |||||||||| || |||| ||||||||   |||| |||||| |||||||||||  |||||| | || | |||||    
T  33944680 tcctccaatacaattttttagttcctccaaatgaggagggttttgtattatga-agaaaagttaacccccaaagccctcctctcccattttcctctattt 33944778  T
Q  101 cttccactt 109  Q
    |||||||||    
T  33944779 cttccactt 33944787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 42583328 - 42583428
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||||||||||||||||||| ||||||            |||||||||||||||||||| ||||||| |  ||||||||| |||||||||    
T  42583328 ccaatacaatttttgagttcccccaaatga-ggggat------------gtaaaaaattaacctccaaaaccctctcatttcaatgtcttctatttcttc 42583414  T
Q  105 cacttgctccttcc 118  Q
    ||||||||| ||||    
T  42583415 cacttgctcattcc 42583428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 54 - 166
Target Start/End: Original strand, 42583364 - 42583480
Alignment:
Q  54 gtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccacttgctccttccnnnnnnnncaaaaccctccccttc-----aaactc 148  Q
    |||||||||||||||||||| ||||||| |  ||||||||| |||||||||||||||||| ||||        |||||||||||||| |     ||||||    
T  42583364 gtaaaaaattaacctccaaaaccctctcatttcaatgtcttctatttcttccacttgctcattccttttttc-caaaaccctcccctcccctccaaactc 42583462  T
Q  149 ccaaacaaagcctaagag 166  Q
    ||||||||||||||||||    
T  42583463 ccaaacaaagcctaagag 42583480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 1132965 - 1133081
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatg-agtaaaaaattaacctccaaagccctctcctcccaatgtcttttatt 99  Q
    ||||||||||||||||||||||||||| |||||||| |  |||| ||||||| |||  ||||| |||| ||||| || || |||| ||||||| | ||||    
T  1132965 tcctccaatacaatttttgagttccccaaaatgaggagagttttgtattatgaagt--aaaatgaacccccaaaaccttcccctctcaatgtcatctatt 1133062  T
Q  100 tcttccacttgctccttcc 118  Q
    || ||||||||||| ||||    
T  1133063 tcgtccacttgctcattcc 1133081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 11040868 - 11040919
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatg 52  Q
    |||||||||||||||||||||||||||||||| |||| |||||| |||||||    
T  11040868 tcctccaatacaatttttgagttcccccaaataagggagattttgtattatg 11040919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 48370222 - 48370292
Alignment:
Q  3 ctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaag 74  Q
    |||| |||||||||||||||||||| ||||||| | |||||| |||||||| ||||||||||||||| ||||    
T  48370222 ctccgatacaatttttgagttcccc-aaatgagtgagattttatattatgaataaaaaattaacctcaaaag 48370292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 118
Target Start/End: Complemental strand, 3707091 - 3707030
Alignment:
Q  57 aaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccacttgctccttcc 118  Q
    |||||| |||| |||||||| ||||||| ||||||| | |||||||||||||||||||||||    
T  3707091 aaaaatgaacccccaaagccttctcctctcaatgtcatctatttcttccacttgctccttcc 3707030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 15499339 - 15499449
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||||||||| |||||||||||  |||||| ||||||||  | |||| | | | |||||||| || |||  ||||||  | |||||    
T  15499339 tcctccaatacaatttttgagttctcccaaatgaggaagattttgtattatga--agaaaagtgaaccccaaagccttcccctttcaatgtaatctattt 15499436  T
Q  101 cttccacttgctc 113  Q
    |||||||||||||    
T  15499437 cttccacttgctc 15499449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 40118925 - 40119014
Alignment:
Q  2 cctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgt 91  Q
    ||||||||||||||||| ||||||||||||||||| || |||| | | ||||  ||||| | | || ||||||||||| |||||||||||    
T  40118925 cctccaatacaattttttagttcccccaaatgaggagggttttgtttaatgaagaaaaattaaccccccaaagccctcccctcccaatgt 40119014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 44400750 - 44400634
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| |||||  |||||||| | || |||| ||| ||||  ||||  |||||| |||||||||||  |||||| | || |||||||    
T  44400750 tcctccaatacaattttttagttcgtccaaatgaagagggttttgtatcatgaagaaaag-ttaacccccaaagccctcctctcccattttcctttattt 44400652  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||||||| ||||    
T  44400651 cttccacttgctcattcc 44400634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 37674181 - 37674297
Alignment:
Q  2 cctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttc 101  Q
    ||||||||||||||||| |||||| | |||||||| || |||| ||| ||||  ||||  | | || |||||||||||  |||||| | || ||||||||    
T  37674181 cctccaatacaattttttagttcctcaaaatgaggagggttttgtatcatgaagaaaagttaaccccccaaagccctcctctcccattttcctttatttc 37674280  T
Q  102 ttccacttgctccttcc 118  Q
    |||||||||||| ||||    
T  37674281 ttccacttgctcgttcc 37674297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 44979460 - 44979408
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    |||||||||||||||||| ||||||||||||| ||||||||||  ||||||||    
T  44979460 tcctccaatacaattttttagttcccccaaattagggggatttaatattatga 44979408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 50948247 - 50948129
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctcc-aaagccctctcctcccaatgtcttttatt 99  Q
    |||||||||||||||||| |||||| |||| ||||| || |||| ||||||||  ||||  | | ||||| |||||||||  |||||| | |||| ||||    
T  50948247 tcctccaatacaattttttagttcctccaactgaggagggttttgtattatgaagaaaagttaaccctccaaaagccctcctctcccattttcttctatt 50948148  T
Q  100 tcttccacttgctccttcc 118  Q
    |||||||| ||||| ||||    
T  50948147 tcttccacatgctcattcc 50948129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 52620865 - 52620907
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattt 43  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  52620865 tcctccaatacaatttttgagttctcccaaatgaggaggattt 52620907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 53664639 - 53664756
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctc-caaagccctctcctcccaatgtcttttatt 99  Q
    |||||||||||||||||| |||||| |||||||||| || |||| ||||||||   |||| |||||| | ||||| ||||  ||| || | |||| ||||    
T  53664639 tcctccaatacaattttttagttcctccaaatgaggagggttttgtattatga-agaaaagttaacccctcaaagtcctcctctctcattttcttctatt 53664737  T
Q  100 tcttccacttgctccttcc 118  Q
    |||||||||||||| ||||    
T  53664738 tcttccacttgctcattcc 53664756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 33908989 - 33909105
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    ||||||||||||| |||| |||| |||||||||||| || |||| ||||||||  ||||  | | || ||||||||||| | ||||| | || | |||||    
T  33908989 tcctccaatacaactttttagtttccccaaatgaggagggttttgtattatgaagaaaagttaatcccccaaagccctc-cttcccattttcctctattt 33909087  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||||||| ||||    
T  33909088 cttccacttgctcattcc 33909105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 25754142 - 25754194
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    |||||||||||||||||| |||||| |||||||||| || |||| ||||||||    
T  25754142 tcctccaatacaattttttagttcctccaaatgaggagggttttgtattatga 25754194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 38639630 - 38639578
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    |||||||||||||||||| |||||| |||||||||| || |||| ||||||||    
T  38639630 tcctccaatacaattttttagttcctccaaatgaggagggttttgtattatga 38639578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 45570983 - 45571035
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    |||||||||||||||||| ||||||||||||||||| || |||  ||||||||    
T  45570983 tcctccaatacaattttttagttcccccaaatgaggagggtttaatattatga 45571035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 517672 - 517780
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||| |||||||||||| |||||||||||||||||| || |||| ||||||||   ||||||||||| ||||||||||   |||| | | || | |||||    
T  517672 tccttcaatacaatttt-gagttcccccaaatgaggagggttttgtattatga-agaaaaattaacc-ccaaagcccttctctcctattttcctctattt 517768  T
Q  101 cttccacttgct 112  Q
    ||||||||||||    
T  517769 cttccacttgct 517780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 106
Target Start/End: Complemental strand, 49304263 - 49304165
Alignment:
Q  7 aatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttcca 106  Q
    ||||||||||||||||||| | |||||||   |||||| |||  |||  ||||| | |||| |||||||||||| ||||| | |||||||||||||||||    
T  49304263 aatacaatttttgagttcctctaaatgagtaagattttgtatcgtgaagaaaaa-taaacccccaaagccctcttctccctaagtcttttatttcttcca 49304165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 166
Target Start/End: Original strand, 32859073 - 32859107
Alignment:
Q  132 ccctccccttcaaactcccaaacaaagcctaagag 166  Q
    ||||||||| |||||||||||||||||||||||||    
T  32859073 ccctcccctccaaactcccaaacaaagcctaagag 32859107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 41677502 - 41677540
Alignment:
Q  6 caatacaatttttgagttcccccaaatgagggggatttt 44  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  41677502 caatacattttttgagttcccccaaattagggggatttt 41677540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 55445011 - 55444977
Alignment:
Q  127 caaaaccctccccttcaaactcccaaacaaagcct 161  Q
    |||||||||||||| ||||||||||||||||||||    
T  55445011 caaaaccctcccctccaaactcccaaacaaagcct 55444977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 11500975 - 11501008
Alignment:
Q  132 ccctccccttcaaactcccaaacaaagcctaaga 165  Q
    ||||||||| ||||||||||||||||||||||||    
T  11500975 ccctcccctccaaactcccaaacaaagcctaaga 11501008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 33281749 - 33281798
Alignment:
Q  4 tccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    ||||||||||||||||||||||   |||||||| ||||||| ||||||||    
T  33281749 tccaatacaatttttgagttcctataaatgaggaggattttatattatga 33281798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 21777487 - 21777455
Alignment:
Q  132 ccctccccttcaaactcccaaacaaagcctaag 164  Q
    ||||||||||||||||| |||||||||||||||    
T  21777487 ccctccccttcaaactctcaaacaaagcctaag 21777455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 21856094 - 21856042
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    |||| |||||||| |||| ||||||||||||| | ||||||||| ||||||||    
T  21856094 tccttcaatacaaatttttagttcccccaaattaaggggattttgtattatga 21856042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 160
Target Start/End: Original strand, 27922148 - 27922176
Alignment:
Q  132 ccctccccttcaaactcccaaacaaagcc 160  Q
    |||||||||||||||||||||||||||||    
T  27922148 ccctccccttcaaactcccaaacaaagcc 27922176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 35283321 - 35283353
Alignment:
Q  132 ccctccccttcaaactcccaaacaaagcctaag 164  Q
    ||||||||| |||||||||||||||||||||||    
T  35283321 ccctcccctccaaactcccaaacaaagcctaag 35283353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 42134765 - 42134833
Alignment:
Q  41 ttttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccactt 109  Q
    |||| |||||||| |||||| | |||||| ||| ||| || |||||| |||||| ||||||||||||||    
T  42134765 ttttgtattatgaataaaaactcaacctcaaaaacccgcttctcccactgtcttatatttcttccactt 42134833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 49855848 - 49855963
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||| |||||||||||||||||||| | |||||||    ||||| ||||||||   |||||| |||| ||||| || ||  ||| ||||||| | |||||    
T  49855848 tccttcaatacaatttttgagttcctctaaatgagaattattttgtattatga-agaaaaatgaacccccaaaaccttcctctctcaatgtcatctattt 49855946  T
Q  101 cttccacttgctccttc 117  Q
    ||| |||||||||||||    
T  49855947 ctttcacttgctccttc 49855963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 51686547 - 51686496
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    |||||||||||||||||| |||| ||||||||||||||| |||  ||||||||    
T  51686547 tcctccaatacaattttttagtt-ccccaaatgaggggggtttagtattatga 51686496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 53888720 - 53888752
Alignment:
Q  132 ccctccccttcaaactcccaaacaaagcctaag 164  Q
    ||||||||| |||||||||||||||||||||||    
T  53888720 ccctcccctccaaactcccaaacaaagcctaag 53888752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 168
Target Start/End: Complemental strand, 54372433 - 54372397
Alignment:
Q  132 ccctccccttcaaactcccaaacaaagcctaagagta 168  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  54372433 ccctcccctccaaactcccaaacaaagcctaaaagta 54372397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 4e-54; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 29241877 - 29242032
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  29241877 ccaatacaatttttgagttaccccaaatgagggggattttttattatgagtaaaaaattatcctccaaagccctctcctcccaatgtcttctatttcttc 29241976  T
Q  105 cacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcct 161  Q
    || |||||||||||        |||||||||||||| ||||||||||||||||||||    
T  29241977 catttgctccttcc-ttttttccaaaaccctcccctccaaactcccaaacaaagcct 29242032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 24734908 - 24734806
Alignment:
Q  16 tttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccacttgctcct 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |    
T  24734908 tttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctcgt 24734809  T
Q  116 tcc 118  Q
    |||    
T  24734808 tcc 24734806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 5 - 167
Target Start/End: Original strand, 4909959 - 4910119
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||| |||||| ||||||||| | ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| | |||||||    
T  4909959 ccaatacaatttttaagttcctccaaatgagagagattttttattatgagtaaaaaattaacctccaaagctctcccctcccaatgtcttctgtttcttc 4910058  T
Q  105 cacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcctaagagt 167  Q
    ||||||||||||||        |||||||||||||| |||||| |||||||||||||||||||    
T  4910059 cacttgctccttcc--atctttcaaaaccctcccctccaaacttccaaacaaagcctaagagt 4910119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 26574439 - 26574552
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||| |||||||||| |||||||||    
T  26574439 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaaccttcaaagtcatctccttccaatgtcttctatttcttc 26574538  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  26574539 cacttgctccttcc 26574552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 5 - 166
Target Start/End: Complemental strand, 5825369 - 5825210
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||| ||||||||     
T  5825369 ccaatacaaattttgagttcccc-aaatgagggggattttttattatcagtaaaaaattaaccttcaaagccttctcctcccaatgtcttctatttcttt 5825271  T
Q  105 cacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcctaagag 166  Q
    ||||||||||||||        |||||||||||||| || ||||||||||||||||||||||    
T  5825270 cacttgctccttcc-ttttttccaaaaccctcccctccatactcccaaacaaagcctaagag 5825210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 7 - 161
Target Start/End: Complemental strand, 1029328 - 1029176
Alignment:
Q  7 aatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttcca 106  Q
    |||||||||||| | |||||||||||||| |  ||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||    
T  1029328 aatacaattttttacttcccccaaatgagagaaattttttattatgagtaaaaaattatcctccaaagccctctccttccaatgtcttctatttcttcca 1029229  T
Q  107 cttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcct 161  Q
    ||||||||||||        ||||||||| |||| ||||||||||||||||||||    
T  1029228 cttgctccttcc-ttttttccaaaaccct-ccctccaaactcccaaacaaagcct 1029176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 23095175 - 23095253
Alignment:
Q  8 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctccc 86  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23095175 atacaattttttagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctccc 23095253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 31345415 - 31345527
Alignment:
Q  6 caatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttcc 105  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||| || |||| ||||||||||||| ||||| ||||| ||||    
T  31345415 caatacaatttttgagttcccccacatgaaggggatttttaattatgagtaaaaaattaacatctaaagtcctctcctcccaacgtcttctattttttcc 31345514  T
Q  106 acttgctccttcc 118  Q
    ||| || ||||||    
T  31345515 actcgcaccttcc 31345527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 26481175 - 26481284
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggatttttt-attatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttctt 103  Q
    ||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||      |||||||||| ||||||||    
T  26481175 ccaatacaatttttgagctcccctaaatgagggggatttttttattatgagtaaaaaattaacctccaaagccctt-----ccaatgtcttctatttctt 26481269  T
Q  104 ccacttgctccttcc 118  Q
    ||||||||| |||||    
T  26481270 ccacttgctacttcc 26481284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 34914663 - 34914560
Alignment:
Q  5 ccaatacaatttttgagtt-cccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttctt 103  Q
    ||||||||||||||||||| |||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||| |||||| ||  ||||||||    
T  34914663 ccaatacaatttttgagtttcccccaaatgagag--attttttattatgagtaaaaaattaacctccaaagccctctccttccaatgcctactatttctt 34914566  T
Q  104 ccactt 109  Q
    ||||||    
T  34914565 ccactt 34914560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 14276018 - 14275910
Alignment:
Q  9 tacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccact 108  Q
    ||||||||||  |||| | ||||||||| | ||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||    
T  14276018 tacaattttttcgttcgctcaaatgaggag-attttttattatgagtaaaaaattaaccttcatagccctctcctcccaatgtcttctatttcttccact 14275920  T
Q  109 tgctccttcc 118  Q
    ||||| ||||    
T  14275919 tgctcattcc 14275910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 26713904 - 26713787
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggatttt-ttattatgagtaaaaaattaacctc-caaagccctctcctcccaatgtcttttat 98  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| |||| ||||  ||||| |||||| | |||||||||| |||||||||||  | |||    
T  26713904 tcctccaatacaatttttgagttcccc-aaatgaggaggattttcttatcatgaagaaaaa-ttaacccctcaaagccctcccctcccaatgtactctat 26713807  T
Q  99 ttcttccacttgctccttcc 118  Q
    ||||||||||||||||||||    
T  26713806 ttcttccacttgctccttcc 26713787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 1567319 - 1567205
Alignment:
Q  4 tccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttctt 103  Q
    ||||||||||||||| |||||| |||||||||| || |||| ||||||||  ||||  | | || ||||||| |||  |||||| | |||| ||||||||    
T  1567319 tccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagctctcctctcccattttcttctatttctt 1567220  T
Q  104 ccacttgctccttcc 118  Q
    |||||||||| ||||    
T  1567219 ccacttgctcattcc 1567205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 32719416 - 32719523
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| |||||| |||||||||| || |||| ||||||||   |||| |||||| |||||||||||   ||||| | || | |||||    
T  32719416 tcctccaatacaattttttagttcctccaaatgaggagggttttgtattatga-agaaaagttaacccccaaagccctcctttcccattttcctctattt 32719514  T
Q  101 cttccactt 109  Q
    |||||||||    
T  32719515 cttccactt 32719523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 115
Target Start/End: Complemental strand, 15615640 - 15615594
Alignment:
Q  69 ccaaagccctctcctcccaatgtcttttatttcttccacttgctcct 115  Q
    ||||| |||||||||||||||||||| |||||||| |||||||||||    
T  15615640 ccaaaaccctctcctcccaatgtcttctatttctttcacttgctcct 15615594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 166
Target Start/End: Original strand, 12779750 - 12779781
Alignment:
Q  135 tccccttcaaactcccaaacaaagcctaagag 166  Q
    ||||||||||||||||||||||||||||||||    
T  12779750 tccccttcaaactcccaaacaaagcctaagag 12779781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 24874975 - 24875083
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||| ||| |||||||| ||||||||||| |||  ||||||||  ||||  || ||| ||||||||||| ||||||| | |||| |||||    
T  24874975 tcctccaatacaatgttttagttcccc-aaatgaggggg-tttagtattatgaagaaaag-ttgacccccaaagccctcccctcccattttcttatattt 24875071  T
Q  101 cttccacttgct 112  Q
    |||||| |||||    
T  24875072 cttccatttgct 24875083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 13380579 - 13380529
Alignment:
Q  4 tccaatacaatttttgagttc-ccccaaatgagggggattttttattatga 53  Q
    ||||||||||||||||||||| ||||||||||||  |||||| ||||||||    
T  13380579 tccaatacaatttttgagttccccccaaatgaggatgattttatattatga 13380529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 118
Target Start/End: Original strand, 2365721 - 2365754
Alignment:
Q  85 ccaatgtcttttatttcttccacttgctccttcc 118  Q
    |||||||||| |||||||||||||||||||||||    
T  2365721 ccaatgtcttctatttcttccacttgctccttcc 2365754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 2365777 - 2365810
Alignment:
Q  132 ccctccccttcaaactcccaaacaaagcctaaga 165  Q
    ||||||||| ||||||||||||||||||||||||    
T  2365777 ccctcccctccaaactcccaaacaaagcctaaga 2365810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 2576741 - 2576790
Alignment:
Q  17 ttgagttcccccaaatgagggggattttttattatgagtaaaaaattaac 66  Q
    ||||||||| ||||| || ||||||||| |||||||| ||||||||||||    
T  2576741 ttgagttcctccaaacgaaggggattttgtattatgaataaaaaattaac 2576790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 463111 - 463059
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    ||||| ||| ||||||||||||||||||  || ||||||||||| ||||||||    
T  463111 tcctctaatgcaatttttgagttcccccgcattagggggattttgtattatga 463059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 28551754 - 28551722
Alignment:
Q  132 ccctccccttcaaactcccaaacaaagcctaag 164  Q
    ||||||||| |||||||||||||||||||||||    
T  28551754 ccctcccctccaaactcccaaacaaagcctaag 28551722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 7e-53; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 36906224 - 36906111
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  36906224 ccaatacaatttttgagttcccccaaatgagggggattttttattacgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttc 36906125  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  36906124 cacttgctccttcc 36906111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 34272552 - 34272439
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||    
T  34272552 ccaatacaatttttgagtttccccaaatgagggggattttttattatgagtaaaagattaacctccaaagccctctcctctcaatgtcttctatttcttc 34272453  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  34272452 cacttgctccttcc 34272439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 5 - 167
Target Start/End: Complemental strand, 29612028 - 29611868
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||| | |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29612028 ccaatacaattttttaattcccccaaatgagagg-attttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttatatttcttc 29611930  T
Q  105 cacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcctaagagt 167  Q
    ||||||||| || |         ||||||||||||| ||||||||||||||||||||||||||    
T  29611929 cacttgctcatttctttttcca-aaaaccctcccctccaaactcccaaacaaagcctaagagt 29611868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 6856 - 6742
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggatttttt-attatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttctt 103  Q
    ||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  6856 ccaatacaatttttgagtttccccaaatgagggagatttttttattatgagtaaaaaattaacctccaaagctctctcctcccaatgtcttctatttctt 6757  T
Q  104 ccacttgctccttcc 118  Q
    |||||||||||||||    
T  6756 ccacttgctccttcc 6742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 25033417 - 25033304
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||    
T  25033417 ccaatacaatttttgagttcccccaaatgaggatgattttttattatgagtaaaaaattaacctccaaagctctctcctcccgatgtcttctatttcttc 25033318  T
Q  105 cacttgctccttcc 118  Q
    ||||| ||||||||    
T  25033317 cacttactccttcc 25033304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 36102935 - 36103047
Alignment:
Q  6 caatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttcc 105  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  36102935 caatacaaattttgagttcctccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctccacccaatgtcttctatttcttcc 36103034  T
Q  106 acttgctccttcc 118  Q
    || | ||||||||    
T  36103035 acctactccttcc 36103047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 37659575 - 37659688
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  37659575 ccaatacaatttttgagttcccctaaatgagagggattttttattattagtaaaaaattaacatccaaagccctctcctcccaatgtcttctatttcttc 37659674  T
Q  105 cacttgctccttcc 118  Q
    ||||  ||||||||    
T  37659675 cactcactccttcc 37659688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 2474811 - 2474923
Alignment:
Q  6 caatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttcc 105  Q
    ||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  2474811 caatacaatttttaagttctcccaaatgaggaggattttttattatgagtaaaaaattaatctccaaaaccctctcctcccaatgtcttctatttcttcc 2474910  T
Q  106 acttgctccttcc 118  Q
    |||| ||||||||    
T  2474911 acttactccttcc 2474923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 4734542 - 4734653
Alignment:
Q  7 aatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttcca 106  Q
    |||| ||| |||||| ||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  4734542 aatataatatttgaggtcccccaaatgagaggaattttttattatgagtaaaaaattaacctccaaaaccctctcctcccaatgtcttctatttcttcca 4734641  T
Q  107 cttgctccttcc 118  Q
    ||||||||||||    
T  4734642 cttgctccttcc 4734653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 31297388 - 31297549
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| |||||||| ||||||||    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||    
T  31297388 tcctccaatacaattttttagttcccc-aaatgaggttttttttttattatgagtaaaaaattaaccttcaaagccatctcctcccaatgtcttctattt 31297486  T
Q  101 cttccacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcctaag 164  Q
    |||||||||||||||| |        ||||||||||| || |||||||||||||||||||||||    
T  31297487 cttccacttgctcctt-cattttttccaaaaccctcctctccaaactcccaaacaaagcctaag 31297549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 34304750 - 34304640
Alignment:
Q  7 aatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttcca 106  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||  |||||||| |||||||||||    
T  34304750 aatacaatttttgagttcccccaaatgagggg-attttttattatgagtaaaaaattaaccttcaaagccctctcatcttaatgtcttctatttcttcca 34304652  T
Q  107 cttgctccttcc 118  Q
    ||||||||||||    
T  34304651 cttgctccttcc 34304640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 13865136 - 13865247
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||| ||| |||||| |||||||| |||||||||    
T  13865136 ccaatacaatttttgagttcccc-aaataagggggattttttattatgagtaaaaaattaaccttcaaagtcctttcctccgaatgtcttctatttcttc 13865234  T
Q  105 cacttgctccttc 117  Q
    |||||||||||||    
T  13865235 cacttgctccttc 13865247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 3404619 - 3404730
Alignment:
Q  6 caatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttcc 105  Q
    ||||| |||||| ||||||||| ||||||||| |||||||||||| |||||||||||||| |||||||||| |||||||| |||||||| ||||||||||    
T  3404619 caatataattttcgagttcccc-aaatgagggagattttttattaagagtaaaaaattaatctccaaagccttctcctcctaatgtcttctatttcttcc 3404717  T
Q  106 acttgctccttcc 118  Q
    |||||||||||||    
T  3404718 acttgctccttcc 3404730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 43733160 - 43733277
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| | ||||| ||||||||| ||||||| |||||||| |||||| |||||| | ||||||||||||| |||||||||| |||||    
T  43733160 tcctccaatacaattttttaattccctcaaatgaggaggattttgtattatgaataaaaagttaacccctaaagccctctccttccaatgtcttctattt 43733259  T
Q  101 cttccacttgctccttcc 118  Q
    ||||| ||||||| ||||    
T  43733260 cttcctcttgctcattcc 43733277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 1942124 - 1942190
Alignment:
Q  52 gagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccacttgctccttcc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  1942124 gagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgatccttcc 1942190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 34349719 - 34349650
Alignment:
Q  47 attatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccacttgctccttc 117  Q
    |||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  34349719 attatgagtaaaaaattaacatccaaagccctctcatcccaatgttttttatttctt-cacttgctccttc 34349650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 39193972 - 39193855
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    ||||||||||||| |||| ||||||||||||||| | || |||| ||||||||  ||||| | | || ||||||||||| |||||||||||  | |||||    
T  39193972 tcctccaatacaactttttagttcccccaaatgaagagggttttatattatgaagaaaaattaaccccccaaagccctcccctcccaatgtactctattt 39193873  T
Q  101 cttccacttgctccttcc 118  Q
    |||||||||||| |||||    
T  39193872 cttccacttgctacttcc 39193855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 40985114 - 40985173
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaa 60  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||    
T  40985114 tcctccaatacaatttttgagttcccccaaatgaggaggattttgtattatgaataaaaa 40985173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 79653 - 79770
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| ||||||||||||||||| || |||  ||||||||  ||||  | | || ||||||||||| ||||||| | || | |||||    
T  79653 tcctccaatacaattttttagttcccccaaatgaggagggtttagtattatgaagaaaacgtaaccccccaaagccctcccctcccattttcctctattt 79752  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||||||| ||||    
T  79753 cttccacttgctcgttcc 79770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 1839860 - 1839976
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| ||||||||||||||||| || |||| |||| |||  |||||     |||||||||||| ||| |||||||||| | |||||    
T  1839860 tcctccaatacaatttttaagttcccccaaatgaggagggttttatattttgaagaaaaataagccctccaaagccc-ctcttcccaatgtcctctattt 1839958  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||| ||||||||    
T  1839959 cttccacttactccttcc 1839976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 21173898 - 21174014
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||| ||||||| |||||| |||||||||| || |||| ||||||||  ||||  |||||| |||||||||||  |||||| | |||| |||||    
T  21173898 tcctccaatataattttttagttcctccaaatgaggagggttttgtattatgaagaaaag-ttaacccccaaagccctcctctcccattttcttctattt 21173996  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||||||| ||||    
T  21173997 cttccacttgctcattcc 21174014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 34336081 - 34335966
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    ||||||||| |||||||| ||||||| ||||||||| || |||  ||| ||||  ||||  |||||| ||||||||||| ||||||| | || |||||||    
T  34336081 tcctccaatgcaattttttagttccctcaaatgaggagg-tttagtatcatgaagaaaag-ttaacccccaaagccctcccctcccattttcctttattt 34335984  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||||||| ||||    
T  34335983 cttccacttgctcattcc 34335966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 23932598 - 23932705
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| |||||| |||||||||| || |||| ||||||||   |||| |||||| |||||||||||  ||| || | || | |||||    
T  23932598 tcctccaatacaattttttagttcctccaaatgaggagggttttgtattatga-agaaaagttaacccccaaagccctcctctctcattttcctctattt 23932696  T
Q  101 cttccactt 109  Q
    |||||||||    
T  23932697 cttccactt 23932705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 118
Target Start/End: Original strand, 6839844 - 6839939
Alignment:
Q  23 tcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccacttgctccttcc 118  Q
    |||| ||||||||||| ||||| |||||||| ||||||||||||||| |||   ||||| || || |||||| ||||||||  |||||||| ||||    
T  6839844 tccctcaaatgaggggaattttatattatgaataaaaaattaacctctaaaaatctctcatctcagtgtcttctatttcttttacttgctcattcc 6839939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 28169918 - 28169801
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||| ||||||||||||||||||| ||  ||||||| ||||||||  |||||   ||||| | || ||||  | |||||| ||||| ||||     
T  28169918 tcctccaatacattttttgagttcccccaaattagaaggattttgtattatgaagaaaaatgaaaccttccaaaccctaccatcccaaagtcttctattc 28169819  T
Q  101 cttccacttgctccttcc 118  Q
     |||||||| ||||||||    
T  28169818 tttccacttcctccttcc 28169801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 41866157 - 41866268
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| |||| |||||||| ||| || |||  ||||||||   |||| |||| | || || ||||| ||||||| | || |||||||    
T  41866157 tcctccaatacaattttttagtttccccaaataaggagggtttaatattatga-agaaaagttaatccccgaaaccctcccctcccattttcctttattt 41866255  T
Q  101 cttccacttgctc 113  Q
    |||||||||||||    
T  41866256 cttccacttgctc 41866268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 26772685 - 26772798
Alignment:
Q  4 tccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttctt 103  Q
    ||||||||||||||| ||||||  ||||||| | || |||| ||||||||   |||| ||||||||| ||  ||||  |||||| | |||| ||||||||    
T  26772685 tccaatacaattttttagttccttcaaatgatgagggttttgtattatga-agaaaagttaacctcccaaagcctcctctcccattttcttctatttctt 26772783  T
Q  104 ccacttgctccttcc 118  Q
    |||||||||| ||||    
T  26772784 ccacttgctcattcc 26772798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 35376667 - 35376785
Alignment:
Q  1 tcctccaatacaatttttg-agttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatt 99  Q
    ||||| ||||||||||||  |||||||||||||||||  |||||| ||| ||||  |||||   | || ||||||| ||| |||  ||||||| ||||||    
T  35376667 tcctctaatacaattttttcagttcccccaaatgaggaagattttgtatcatgaagaaaaatgaaccccccaaagctctcccctttcaatgtcctttatt 35376766  T
Q  100 tcttccacttgctccttcc 118  Q
    || |||||||||| |||||    
T  35376767 tcgtccacttgcttcttcc 35376785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 12506238 - 12506271
Alignment:
Q  3 ctccaatacaatttttgagttcccccaaatgagg 36  Q
    |||||||||||||||| |||||||||||||||||    
T  12506238 ctccaatacaattttttagttcccccaaatgagg 12506271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 28517295 - 28517403
Alignment:
Q  9 tacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaa-gccctctc-ctcccaatgtcttttatttcttcca 106  Q
    ||||||||||||||  |||||| ||| | ||||||| ||||||||  ||||||| ||||| |||| ||| || | ||| ||||||| |||||||||||||    
T  28517295 tacaatttttgagtatccccaagtgatgaggattttgtattatgaa-aaaaaatgaaccttcaaaagccttcccactctcaatgtcatttatttcttcca 28517393  T
Q  107 cttgctcctt 116  Q
    | ||||||||    
T  28517394 cctgctcctt 28517403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 401879 - 401967
Alignment:
Q  6 caatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtctt 94  Q
    |||||||||||||||||| || ||||| | |   ||||| |||||||| ||||||||||||| |  ||| |||||| ||||||| ||||    
T  401879 caatacaatttttgagttacctcaaataaagtatattttgtattatgaataaaaaattaaccccataagtcctctcatcccaatatctt 401967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 7e-53; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 35701097 - 35700984
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  35701097 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttt 35700998  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  35700997 cacttgctccttcc 35700984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 41695014 - 41694859
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||| |||||||||    
T  41695014 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaaactctctccttccaatgtcttctatttcttc 41694915  T
Q  105 cacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcct 161  Q
    ||||||||||||||        |||||||||||||| |||||||| |||||||||||    
T  41694914 cacttgctccttcc-tttttttcaaaaccctcccctccaaactccgaaacaaagcct 41694859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 9 - 163
Target Start/End: Original strand, 38302400 - 38302554
Alignment:
Q  9 tacaatttttgagttcccccaaatgaggggga-ttttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccac 107  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||    
T  38302400 tacaatttttgagttcccccaaatgagggggaattttttattatgagtaaaatattaacctccaaagccctctcctctcaatgtcttctatttcttccac 38302499  T
Q  108 ttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcctaa 163  Q
    |||||||||||        |||||||||||||| ||||||||||||||||||||||    
T  38302500 ttgctccttcc-tttttttcaaaaccctcccctccaaactcccaaacaaagcctaa 38302554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 5 - 167
Target Start/End: Complemental strand, 2021017 - 2020857
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||    
T  2021017 ccaatacaatttttgagttcctccaaa-gagggggattttttattatgagtaaaaaattaacctccaaagctctctcctcccaatgtctactatttcttc 2020919  T
Q  105 cacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcctaagagt 167  Q
    ||||||||||||||        |||||||||||||| |||| ||||||||||| |||||||||    
T  2020918 cacttgctccttcc-ttttttccaaaaccctcccctccaaattcccaaacaaaacctaagagt 2020857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 4649031 - 4649186
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||    
T  4649031 ccaatacagtttttgagttccctcaaatgagggggattttttattatgagtaaaaaattaaccttcaaagccctctcctctcaatgtcttctatttcttc 4649130  T
Q  105 cacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcct 161  Q
    ||||||||| || |        |||||||||||||| ||||||||||||||||||||    
T  4649131 cacttgctcatt-ctttttttccaaaaccctcccctccaaactcccaaacaaagcct 4649186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 38928747 - 38928859
Alignment:
Q  6 caatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttcc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||| ||||||||||    
T  38928747 caatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagtcctctcattccaatgtcttctatttcttcc 38928846  T
Q  106 acttgctccttcc 118  Q
    |||||||||||||    
T  38928847 acttgctccttcc 38928859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 10295520 - 10295407
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  10295520 ccaatacaatttttgaattcccccaaaagacggggattttttattatgagtaaaaaattaacctccaaagccatctcctcccaatgtcttctatttcttc 10295421  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  10295420 cacttgctccttcc 10295407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 5 - 153
Target Start/End: Complemental strand, 26149640 - 26149492
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||||||||||||||||||| |||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26149640 ccaatacaatttttgagttcccccaaatgatgggacttttttattacgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttc 26149541  T
Q  105 cacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaa 153  Q
    |||||| |||||||        |||||| ||||||| ||||||||||||    
T  26149540 cacttgatccttccttttttttcaaaactctcccctccaaactcccaaa 26149492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 1658214 - 1658101
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||||| ||||||||||||| | |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  1658214 ccaatacaatttttgaattcccccaaatgaagaggattttttattatgactaaaaaattaacctccaaagtcctctcctcccaatgtcttctatttcttc 1658115  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  1658114 cacttgctccttcc 1658101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 32760794 - 32760681
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||| |||||||| |||||||||    
T  32760794 ccaatacaatttttgagttcccccaaatgagggagattttttattataagcaaaaaattaacctccaaagccctctcctcctaatgtcttatatttcttc 32760695  T
Q  105 cacttgctccttcc 118  Q
    ||| ||||||||||    
T  32760694 cacctgctccttcc 32760681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 27480216 - 27480327
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27480216 ccaatacaatttttgagttccctcaaatgaggaggattttttatta--agtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttc 27480313  T
Q  105 cacttgctccttcc 118  Q
    |||||||| |||||    
T  27480314 cacttgcttcttcc 27480327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 37508435 - 37508544
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtc-ttttatttctt 103  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  37508435 ccaatacaatttttgagttcctccaaatgaggggaattttttattatgaataaaaaattaacctccaaagccctctccttccaatgtctttttatttctt 37508534  T
Q  104 ccacttgctc 113  Q
    ||||||||||    
T  37508535 ccacttgctc 37508544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 25026959 - 25026852
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||      ||||||    
T  25026959 ccaatacaattttttagttctcccaaatgagggagattttttattatgagtaaaaaattaacctccaaagacctctcctcccaatgtc------ttcttc 25026866  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  25026865 cacttgctccttcc 25026852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 17092934 - 17092783
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||| ||||||||||||   |||||||| ||||||||||||||||| ||||||||||||||||| |||||||||| ||| |||||    
T  17092934 ccaatacaatttttgagtttccccaaatgaggaa-attttttactatgagtaaaaaattaatctccaaagccctctccttccaatgtcttctatatcttc 17092836  T
Q  105 cacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaag 158  Q
    |||||||||||| |        |||||||||||||| |||||| ||||||||||    
T  17092835 cacttgctcctt-ctttttttccaaaaccctcccctccaaacttccaaacaaag 17092783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 35868867 - 35868758
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||| ||||||||||||||||||||||||||| |||||| ||||   |||||| ||||||||||||| |||||||||||||||||||| |||||||||    
T  35868867 ccaatataatttttgagttcccccaaatgaggggaatttttcatta---gtaaaagattaacctccaaaaccctctcctcccaatgtcttctatttcttc 35868771  T
Q  105 cacttgctccttc 117  Q
    ||||| |||||||    
T  35868770 cacttcctccttc 35868758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 41638391 - 41638279
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||| |||||||| |||||||||  ||||||||||||||||||||||||||| |||||| | ||||||||| |||||||| |||||| ||    
T  41638391 ccaatacaattttttagttcccc-aaatgagggaaattttttattatgagtaaaaaattaacttccaaaactctctcctcctaatgtcttctatttcatc 41638293  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  41638292 cacttgctccttcc 41638279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 38120219 - 38120332
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||| | |  |||| ||||||||| ||||| |||    
T  38120219 ccaatacaatttttgagttcccccaaatgagggagatttttgattaagagtaaaaaattaacctccaaagtctttccctctcaatgtcttctatttgttc 38120318  T
Q  105 cacttgctccttcc 118  Q
    ||||| ||| ||||    
T  38120319 cacttactcattcc 38120332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 6491225 - 6491123
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    ||||||||||||||||||||||||||||||||||||  |||||| ||||||||   |||||| |||| ||||||||||||||| ||||||||||||||||    
T  6491225 tcctccaatacaatttttgagttcccccaaatgaggaagattttgtattatga-agaaaaatgaacccccaaagccctctcctaccaatgtcttttattt 6491127  T
Q  101 cttc 104  Q
    ||||    
T  6491126 cttc 6491123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 25598830 - 25598928
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttctt 103  Q
    |||||| ||||||| ||||||||||||| ||| ||| |||||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||||||||    
T  25598830 ccaatataatttttaagttcccccaaataaggaggaatttttattatgaataaaaaattaacccccacagccctctcctcccaatgtcttatatttctt 25598928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 12096943 - 12096834
Alignment:
Q  3 ctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaa--ttaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||| |||||||||||||||||||||||      | ||||||||||||||| |||||||  | ||||||||||||||||||||| |||||| ||| ||||    
T  12096943 ctcctatacaatttttgagttcccccaa------gagattttttattatgaataaaaaaaataaacctccaaagccctctcctctcaatgtttttcattt 12096850  T
Q  101 cttccacttgctcctt 116  Q
    |||||||||| |||||    
T  12096849 cttccacttgttcctt 12096834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 5772760 - 5772871
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| | |||| |||||||||| || |||| ||||||||   |||| |||||| |||||||||||  |||||| | |||| |||||    
T  5772760 tcctccaatacaattttttaattcctccaaatgaggagggttttgtattatga-agaaaagttaacccccaaagccctcctctcccattttcttctattt 5772858  T
Q  101 cttccacttgctc 113  Q
    |||||||||||||    
T  5772859 cttccacttgctc 5772871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 39649612 - 39649495
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| |||||| |||||||||| || |||| ||| ||||  ||||  | | || |||||||||||  |||||| | || |||||||    
T  39649612 tcctccaatacaattttttagttcctccaaatgaggagggttttgtatcatgaagaaaagttaaccccccaaagccctcctctcccattttcatttattt 39649513  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||||||| ||||    
T  39649512 cttccacttgctcattcc 39649495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 15058489 - 15058604
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctc----ccaatgtcttttattt 100  Q
    ||||||||||||| ||||||| | |||||||||  ||||| || ||||| |||||||||||| |||||| |||| | |||    || |||||||||||||    
T  15058489 ccaatacaatttt-gagttcctc-aaatgagggtaattttgtactatgaataaaaaattaacatccaaaaccctttgctcgatcccgatgtcttttattt 15058586  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||||||||||||    
T  15058587 cttccacttgctccttcc 15058604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 35683514 - 35683630
Alignment:
Q  2 cctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttc 101  Q
    ||||||||||||||||| |||||| |||||||||| || |||| ||||||||  ||||  | | || || ||||||||  |||||| | |||| ||||||    
T  35683514 cctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccgaagccctcctctcccattttcttctatttc 35683613  T
Q  102 ttccacttgctccttcc 118  Q
    |||||||||||| ||||    
T  35683614 ttccacttgctcattcc 35683630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 112
Target Start/End: Complemental strand, 32750678 - 32750571
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||| || |||| |||||||||| |||||| ||||||| |||||| | || |||||||| | | |||||||||||||| |||| | || |||||||||    
T  32750678 ccaataaaaatttttagttcccccacatgaggaggattttgtattatcaatataaaattaatcccaaaagccctctcctctcaatttattctatttcttc 32750579  T
Q  105 cacttgct 112  Q
    ||| ||||    
T  32750578 cacatgct 32750571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 43496545 - 43496442
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||| || || ||||||  ||||| ||||||||||| |||||| | |||||||||||||  |||| |||||||||||||  || || |||||||||    
T  43496545 ccaatacatttgtttagttccttcaaataagggggattttgtattataaataaaaaattaacccacaaaaccctctcctcccatcgtgttctatttcttc 43496446  T
Q  105 cact 108  Q
    ||||    
T  43496445 cact 43496442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 57 - 115
Target Start/End: Original strand, 6491418 - 6491476
Alignment:
Q  57 aaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccacttgctcct 115  Q
    |||||| |||| ||||||||||||||| ||||| |||| ||||||||||||||||||||    
T  6491418 aaaaatgaacccccaaagccctctcctaccaatttcttctatttcttccacttgctcct 6491476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 35708793 - 35708909
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    ||||||| |||||||||| ||||||| ||||||||| ||||||| || | |||  ||||| | | || ||||||||| ||||| |||||||| |  ||||    
T  35708793 tcctccagtacaattttttagttccctcaaatgaggaggattttatactttgaagaaaaactaaccccccaaagccc-ctccttccaatgtcctcaattt 35708891  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||| ||||||||    
T  35708892 cttccacttactccttcc 35708909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 10843085 - 10842978
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||| ||||||||||||| |||||| |||||||||| || |||| ||||||||   |||| |||||| |||||||||||  |||||| | || | |||||    
T  10843085 tccttcaatacaattttttagttcctccaaatgaggagggttttgtattatga-agaaaagttaacccccaaagccctcctctcccattttcctctattt 10842987  T
Q  101 cttccactt 109  Q
    |||||||||    
T  10842986 cttccactt 10842978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 19389858 - 19389971
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| |||| |||||||||||| ||||||| ||||||||   | |||| |||| ||||| || |||  || |||| || |||||||    
T  19389858 tcctccaatacaattttttagtt-ccccaaatgaggaggattttgtattatga-agataaatgaacccccaaaaccttcttttctcaatatcatttattt 19389955  T
Q  101 cttccacttgctcctt 116  Q
    ||||||||| ||||||    
T  19389956 cttccacttactcctt 19389971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 1978237 - 1978195
Alignment:
Q  11 caatttttgagttcccccaaatgagggggattttttattatga 53  Q
    ||||||||||||| |||||||||||||||||||| ||||||||    
T  1978237 caatttttgagtttccccaaatgagggggattttgtattatga 1978195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 10955730 - 10955842
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaa-cctccaaagccctctcctcccaatgtcttttatt 99  Q
    |||||||||||||| ||| ||||||||||||||||| || |||| |||||||| | |||| |||| || ||||||||| ||| | ||| | |  | ||||    
T  10955730 tcctccaatacaatcttttagttcccccaaatgaggagggttttgtattatga-tgaaaagttaaccccccaaagccccctctttccatttttctctatt 10955828  T
Q  100 tcttccacttgctc 113  Q
    ||||||||||||||    
T  10955829 tcttccacttgctc 10955842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 15739533 - 15739460
Alignment:
Q  39 gattttttattatgagtaaaaaattaacctc-caaagccctctcctcccaatgtcttttatttcttccacttgc 111  Q
    |||||| |||||||| ||||||||||||||| |||| |||||| || |||||||||| ||||| | ||||||||    
T  15739533 gattttgtattatgaataaaaaattaacctctcaaaaccctcttcttccaatgtcttctatttttcccacttgc 15739460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 17668189 - 17668293
Alignment:
Q  8 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccac 107  Q
    |||| |||||||||||||| ||||||||| ||||||  |||||| |  ||||| | ||||||||||||| || || | |||| || | ||||||||||||    
T  17668189 ataccatttttgagttcccacaaatgaggaggatttagtattataaagaaaaa-tgaacctccaaagccttccccactcaatctcatatatttcttccac 17668287  T
Q  108 ttgctc 113  Q
    ||||||    
T  17668288 ttgctc 17668293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 34063724 - 34063785
Alignment:
Q  57 aaaaattaacctcc-aaagccctctcctcccaatgtcttttatttcttccacttgctccttc 117  Q
    ||||||||||| || ||||||||| ||||||||| || | ||||||||||||||||||||||    
T  34063724 aaaaattaacccccgaaagccctcccctcccaatatcatatatttcttccacttgctccttc 34063785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 9096360 - 9096308
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    ||||||||||||||| |||||||||||||||| |||  |||||| ||||||||    
T  9096360 tcctccaatacaattgttgagttcccccaaattaggaagattttgtattatga 9096308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 35708642 - 35708610
Alignment:
Q  132 ccctccccttcaaactcccaaacaaagcctaag 164  Q
    |||||||||||||||||||||||||||||||||    
T  35708642 ccctccccttcaaactcccaaacaaagcctaag 35708610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 38289357 - 38289305
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    ||||||||||||| ||||| |||||||||||| |||||||| || ||||||||    
T  38289357 tcctccaatacaacttttgggttcccccaaattagggggatcttgtattatga 38289305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 43496901 - 43497010
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| |||| |||||||||||  |  |||| |||||| |   ||||||||||| |||||||||||  |||||| | || |||||||    
T  43496901 tcctccaatacaatttttaagtt-ccccaaatgagcagagttttgtattatta-agaaaaattaacccccaaagccctcctctcccattttcctttattt 43496998  T
Q  101 cttccacttgct 112  Q
    ||| ||||||||    
T  43496999 ctttcacttgct 43497010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 118
Target Start/End: Complemental strand, 1978160 - 1978123
Alignment:
Q  81 cctcccaatgtcttttatttcttccacttgctccttcc 118  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  1978160 cctcccaatgtcttctatttcatccacttgctccttcc 1978123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 165
Target Start/End: Complemental strand, 12229332 - 12229299
Alignment:
Q  132 ccctccccttcaaactcccaaacaaagcctaaga 165  Q
    ||||||||| ||||||||||||||||||||||||    
T  12229332 ccctcccctccaaactcccaaacaaagcctaaga 12229299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 38568407 - 38568492
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctccc 86  Q
    |||||||||| ||||||| ||||||||||||||||| || |||  ||||||||  ||||  | | || ||||||||||| ||||||    
T  38568407 tcctccaatataattttttagttcccccaaatgaggagggtttagtattatgaagaaaagttaaccccccaaagccctcccctccc 38568492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12229503 - 12229555
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    ||||| |||||||||||  ||||||||||||| |||||||||||  |||||||    
T  12229503 tcctctaatacaattttgtagttcccccaaatcagggggattttgaattatga 12229555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 3e-52; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 8555820 - 8555975
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||| |||||||||    
T  8555820 ccaatacaattttttagttcccccaaatgagggggattttttattacgagtaaaaaattaacctccaaaaccctcttctcccaatgtcttctatttcttc 8555919  T
Q  105 cacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcct 161  Q
    ||||||||||||||         ||||||||||||||||||||||||||||||||||    
T  8555920 cacttgctccttccttttttca-aaaaccctccccttcaaactcccaaacaaagcct 8555975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 4042001 - 4041844
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||    
T  4042001 ccaatacaatttttgagttccttcaaatgagggggattttttattatgagtaaaaaattaacctccaaaaccctctcctcccaatatcttctatttcttc 4041902  T
Q  105 cacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcctaa 163  Q
    |||| ||||||| |        |||||||||||||| ||||||||||||||||||||||    
T  4041901 cactcgctcctt-ctttttttccaaaaccctcccctccaaactcccaaacaaagcctaa 4041844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 30312445 - 30312562
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||    
T  30312445 tccttcaatacaattttttagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaaaccctctcctcccaatgtgttctattt 30312544  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||||||||||||    
T  30312545 cttccacttgctccttcc 30312562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 36567322 - 36567434
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||    
T  36567322 ccaatacaatttttgagttcccccaaatgagggagattttttattatgagtaaaaaattaacctccaaaaccctctccttccaatgtcttctatttcttc 36567421  T
Q  105 cacttgctccttc 117  Q
    |||||||||||||    
T  36567422 cacttgctccttc 36567434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 1725947 - 1725834
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| || |||||||||    
T  1725947 ccaatacaatttttgagttcccccagatgagggggattttttattatgagtaaaaaattaacctccaaaaccccctcctcccaatgttttctatttcttc 1725848  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  1725847 cacttgctccttcc 1725834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 18018640 - 18018753
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||     
T  18018640 ccaatacaatttttgagttcccccaaatgagggagattttttattatgagtaaaaaattaacctccaaaaccctctcctcccaatgtcttctatttcttt 18018739  T
Q  105 cacttgctccttcc 118  Q
    |||||||| |||||    
T  18018740 cacttgcttcttcc 18018753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 3038990 - 3039105
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatga--gtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttct 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||||| |    
T  3038990 ccaatacaatttttgagttcccccaaatgagggggattttttattatgatcgtaaaaaattaaccttcaaagccctctcctcccaatgtcttctattttt 3039089  T
Q  103 tccacttgctccttcc 118  Q
    ||||||||||||||||    
T  3039090 tccacttgctccttcc 3039105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 8410974 - 8411086
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  8410974 ccaatacaatttttgagttcccccaaatgaggggaattttttattataagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcctc 8411073  T
Q  105 cacttgctccttc 117  Q
     ||||||||||||    
T  8411074 aacttgctccttc 8411086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 5 - 167
Target Start/End: Original strand, 18826270 - 18826437
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgaggggga------ttttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttat 98  Q
    ||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||    
T  18826270 ccaatacaatttttgagttcccccaaatgagggggaggggaattttttattatgagtaaaaaattaacctccaaagccctctcttcctaatgtcttctat 18826369  T
Q  99 ttcttccacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcctaagagt 167  Q
    ||||||||||||||||||||        |||||||||||||| ||||||||||||| |||||| |||||    
T  18826370 ttcttccacttgctccttcc-ttttttccaaaaccctcccctccaaactcccaaactaagccttagagt 18826437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 12964018 - 12964129
Alignment:
Q  7 aatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttcca 106  Q
    ||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  12964018 aatacaattttggagttcccccaaatgatggagattttttattatgagtaaaaaattaacctccaaagctctctcctcccaatgtcttctatttcttcca 12964117  T
Q  107 cttgctccttcc 118  Q
    ||||||||||||    
T  12964118 cttgctccttcc 12964129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 32243512 - 32243399
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  32243512 ccaatacaatttttgagttcccccaaatgaggatgattttttattatgattaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttc 32243413  T
Q  105 cacttgctccttcc 118  Q
    |  |||||||||||    
T  32243412 ccattgctccttcc 32243399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 25960657 - 25960765
Alignment:
Q  8 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccac 107  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||    
T  25960657 atacaatttttgagttcccccaaatgagggagattttctattatgagtaaaaaattaacctccaaagccctctcctttcaatgtcttctatttcttccac 25960756  T
Q  108 ttgctcctt 116  Q
    |||||||||    
T  25960757 ttgctcctt 25960765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 19382914 - 19382802
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||| |||||||||    
T  19382914 ccaatacgatttttgagttcccc-aaatgagggggattttttattatgagtaaaaaattaacctacaaagccctttcctctcaatgtcttctatttcttc 19382816  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  19382815 cacttgctccttcc 19382802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 8991007 - 8991111
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||    
T  8991007 ccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaacctccaaagccatctccttccaatgtcttctatttcttc 8991106  T
Q  105 cactt 109  Q
    |||||    
T  8991107 cactt 8991111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 13765983 - 13766137
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||    
T  13765983 ccaatacaatttttgagttcccc-aaatgaggggaattttttattatgagtaaaaaattaacctctaaagccctcttctaccaatgtcttctatttcttc 13766081  T
Q  105 cacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcct 161  Q
    |||| |||||||||        ||| |||||||||| |||| |||||||||||||||    
T  13766082 cactcgctccttcc-atttttccaataccctcccctccaaattcccaaacaaagcct 13766137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 10165452 - 10165339
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||| |||    
T  10165452 ccaatacaattttttagttcccccaaatgaggggtattctttattatgagtaaaaaattaaccttcaaaaccctctcctcccaatgtcttctattttttc 10165353  T
Q  105 cacttgctccttcc 118  Q
    |||||||| |||||    
T  10165352 cacttgcttcttcc 10165339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 31550293 - 31550406
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||| |||| |  ||||| |||||||||    
T  31550293 ccaatacaatttttgagttcccctaaatgaggggaattttttattatgagtaaaaaattaacctcaaaagccctcttctccaatcgtcttctatttcttc 31550392  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  31550393 cacttgctccttcc 31550406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 18780421 - 18780306
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctccca--atgtcttttatttct 102  Q
    |||||||||||||||||||||||||||||| |||||||| || ||| ||||||||||||||||||||||||||||||||||||  ||||||| |||||||    
T  18780421 ccaatacaatttttgagttcccccaaatgaaggggatttctttttaggagtaaaaaattaacctccaaagccctctcctcccaatatgtcttctatttct 18780322  T
Q  103 tccacttgctccttcc 118  Q
    ||||| ||||||||||    
T  18780321 tccacgtgctccttcc 18780306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 8 - 163
Target Start/End: Complemental strand, 44020388 - 44020232
Alignment:
Q  8 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccac 107  Q
    ||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||  || ||||||||| |||||||||| ||||||||||||    
T  44020388 atacaatttttgagttccctcagatgagggagattttttattatgagtaaaaaattaacctctcaaaccctctccttccaatgtcttctatttcttccac 44020289  T
Q  108 ttgctccttcc-nnnnnnnncaaaaccctccccttcaaactcccaaacaaagcctaa 163  Q
    |||||| ||||         ||||| |||||||| ||||||||||||||||||||||    
T  44020288 ttgctcattcctttcttttccaaaatcctcccctccaaactcccaaacaaagcctaa 44020232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 38023490 - 38023601
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||| |||||||||  ||||||||| |||||||||    
T  38023490 ccaatacaatttttgagttcccc-aaatgagagagattttttattatgagtaaaaaattaacctccaaaaccctctcctttcaatgtcttctatttcttc 38023588  T
Q  105 cacttgctccttc 117  Q
     ||||||||||||    
T  38023589 tacttgctccttc 38023601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 40357494 - 40357414
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcc 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  40357494 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaaaccctctcctcc 40357414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 3119897 - 3120002
Alignment:
Q  7 aatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttcca 106  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||| ||||||||||     
T  3119897 aatacaatttttgagttcccc-aaatgaaggggattttttattatgagtaaaaaattaacctccaaaaccatctcctcgcaatgtcttctatttcttccc 3119995  T
Q  107 cttgctc 113  Q
    |||||||    
T  3119996 cttgctc 3120002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 31899387 - 31899468
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctccc 86  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31899387 ccaatacaatttttgagttcccccaaattaggggaattttttattatgagtaaaaaattaacctccaaagccctctcctccc 31899468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 6 - 117
Target Start/End: Original strand, 14008373 - 14008483
Alignment:
Q  6 caatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttcc 105  Q
    ||||| ||||||||||||||||||||||||  | |||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||    
T  14008373 caatataatttttgagttcccccaaatgagaag-attttttattttgagtaaaaaattaacctccaaagccatctcatcccaatgtcttctatttcttcc 14008471  T
Q  106 acttgctccttc 117  Q
    |||| |||||||    
T  14008472 acttactccttc 14008483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 38293925 - 38293808
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctct-----cctcccaatgtcttttatt 99  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||  ||||||     |||||||||||||| ||||    
T  38293925 ccaatacaatttttgagttcccc-aaatgagggagattttttattatgagtaaaaaattaacctccaagaccctcttctcccctcccaatgtcttctatt 38293827  T
Q  100 tcttccacttgctccttcc 118  Q
    |||||||||||||| ||||    
T  38293826 tcttccacttgctcattcc 38293808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 6711873 - 6711987
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggatttt---ttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttc 101  Q
    ||||||||||| ||||||||||| ||||||| ||||||||   |||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||    
T  6711873 ccaatacaattgttgagttcccctaaatgagagggatttttttttattatgagtaaaaaattaacttccaaagccctctcctctcaatgtcttctatttc 6711972  T
Q  102 ttccacttgctcctt 116  Q
    ||||| ||| |||||    
T  6711973 ttccatttgttcctt 6711987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 44137151 - 44137076
Alignment:
Q  43 ttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccacttgctccttcc 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  44137151 ttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccatttgctccttcc 44137076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 18562039 - 18561933
Alignment:
Q  12 aatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccacttgc 111  Q
    ||||||||||||||  |||||||||| |||||||||||||||||||||||||||||| ||||| | |||||||||||||||||  |||||||| ||||||    
T  18562039 aatttttgagttccatcaaatgagggagattttttattatgagtaaaaaattaaccttcaaagtcatctcctcccaatgtcttcaatttcttctacttgc 18561940  T
Q  112 tccttcc 118  Q
    | |||||    
T  18561939 ttcttcc 18561933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 725993 - 725888
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagt-aaaaaattaacctccaaagccctctcctcccaatgtcttttatttctt 103  Q
    |||||| |||||||||||||| ||||||||||| ||||||||||||||| | |||||||||||||| ||||||||||||| ||||| |||| ||||||||    
T  725993 ccaataaaatttttgagttcctccaaatgagggagattttttattatgaataaaaaaattaacctctaaagccctctccttccaatttcttctatttctt 725894  T
Q  104 ccactt 109  Q
    ||||||    
T  725893 ccactt 725888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 4003469 - 4003352
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||||||||||||||||||||| |  |||| ||||||||  ||||| | | || ||||||||||| ||||||| | || | |||||    
T  4003469 tcctccaatacaatttttgagttcccccaaatgaggagagttttgtattatgaagaaaaattaaccccccaaagccctcccctcccattttcctctattt 4003370  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||||||| ||||    
T  4003369 cttccacttgctcattcc 4003352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 36030854 - 36030738
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    ||||||| |||||||||||||||||||||||||||| | ||||| |||| |||   |||||| |||| ||||||||||||| || ||| ||| | |||||    
T  36030854 tcctccattacaatttttgagttcccccaaatgaggagaattttgtattctga-agaaaaatgaacccccaaagccctctcttctcaaggtcctctattt 36030756  T
Q  101 cttccacttgctccttcc 118  Q
    |||||||| |||||||||    
T  36030755 cttccactggctccttcc 36030738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 4 - 161
Target Start/End: Original strand, 5322162 - 5322317
Alignment:
Q  4 tccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttctt 103  Q
    ||||||||| ||||||||||||||||||||||| ||||||| ||||||||   |||||| |||| ||||||| ||| |||||||||||| | ||| | ||    
T  5322162 tccaatacagtttttgagttcccccaaatgaggaggattttgtattatga-agaaaaatgaacccccaaagctctcccctcccaatgtcctctatctttt 5322260  T
Q  104 ccacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcct 161  Q
    ||||| |||| ||||        ||||||| |||||| ||||||| ||||||||||||    
T  5322261 ccactagctctttcc-ttttttccaaaaccttcccctccaaactcgcaaacaaagcct 5322317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 15555388 - 15555502
Alignment:
Q  3 ctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttct 102  Q
    |||||||||||||||| |||||| |||||||||  || |||| ||||||||  |||| ||||||| |||||||||||  |||||| | |||| |||||||    
T  15555388 ctccaatacaattttttagttcctccaaatgagaagggttttgtattatgaagaaaa-attaacccccaaagccctcctctcccattttcttctatttct 15555486  T
Q  103 tccacttgctccttcc 118  Q
    ||||||||||| ||||    
T  15555487 tccacttgctcattcc 15555502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 1364874 - 1364757
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| |||||| |||||||||| || |||| ||||||||  ||||  | | || |||||||||||  |||||| | |||| |||||    
T  1364874 tcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcctctcccattttcttctattt 1364775  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||||||| ||||    
T  1364774 cttccacttgctcattcc 1364757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 11515085 - 11514968
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| |||||| |||||||||| || |||| ||||||||  ||||  | | || ||||||| |||  |||||| | |||| |||||    
T  11515085 tcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagctctcctctcccattttcttctattt 11514986  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||||||| ||||    
T  11514985 cttccacttgctcattcc 11514968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 15803229 - 15803113
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| ||||||||||| ||||| || |||| |||| |||  |||||     |||||||||||| ||||| |||||||| |  ||||    
T  15803229 tcctccaatacaattttttagttcccccaactgaggagggttttatattttgaagaaaaataagccctccaaagccc-ctccttccaatgtcctccattt 15803131  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||||||||||||    
T  15803130 cttccacttgctccttcc 15803113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 16519129 - 16519245
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    ||||| ||||||| |||| |||| |||||||||||| ||||||| ||||||||  |||||   | || ||||||||||| ||| |||||||  | |||||    
T  16519129 tcctctaatacaactttttagtttccccaaatgaggaggattttgtattatgaagaaaaatcaacccaccaaagccctcccct-ccaatgtactctattt 16519227  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||||||||||||    
T  16519228 cttccacttgctccttcc 16519245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 43333531 - 43333471
Alignment:
Q  57 aaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccacttgctccttc 117  Q
    ||||||||| |||||||||| |||||| |||||||||| ||||||||||| ||||||||||    
T  43333531 aaaaattaatctccaaagccatctccttccaatgtcttctatttcttccaattgctccttc 43333471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 13767466 - 13767397
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaag 74  Q
    |||||||||||||| |||||||||||||||| || ||||| |||||||| || |||||||| | ||||||    
T  13767466 ccaatacaattttttagttcccccaaatgagtggaattttgtattatgaatataaaattaaaccccaaag 13767397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 21834982 - 21834865
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    ||||| ||||||| |||| |||||||| |||||||| |  |||| ||||||||  ||||| | | |||||||||||||  | |||| ||||| | | |||    
T  21834982 tcctctaatacaactttttagttcccctaaatgaggagagttttatattatgaagaaaaattaatcctccaaagcccttccgtcccgatgtcctctgttt 21834883  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||||||||||||    
T  21834882 cttccacttgctccttcc 21834865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 31082856 - 31082740
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||| ||| |||||||||||| |||| || |||  ||||| ||   |||| |||||| ||||||||||| ||||||| | || | |||||    
T  31082856 tcctccaatacaatattttagttcccccaaacgaggagggtttagtattacga-agaaaagttaacccccaaagccctcccctcccattttcctctattt 31082758  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||||||| ||||    
T  31082757 cttccacttgctcattcc 31082740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 35812387 - 35812338
Alignment:
Q  2 cctccaatacaatttttgagttcccccaaatgagggggattttttattat 51  Q
    ||||||| ||||||||||||||||||||||| ||||||||||| ||||||    
T  35812387 cctccaacacaatttttgagttcccccaaataagggggattttgtattat 35812338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 43334844 - 43334799
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttatta 50  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||    
T  43334844 ccaatacaatttttgagttcccccaaaagagggagattttttatta 43334799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 6656161 - 6656042
Alignment:
Q  1 tcctccaatacaattt--ttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttat 98  Q
    ||||||||||||||||  || |||||| |||||||||| || |||| ||||||||  ||||  | | || |||||||||||  |||||| | |||| |||    
T  6656161 tcctccaatacaatttgttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcctctcccattttcttctat 6656062  T
Q  99 ttcttccacttgctccttcc 118  Q
    ||||||||||||||| ||||    
T  6656061 ttcttccacttgctcattcc 6656042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 42644697 - 42644646
Alignment:
Q  2 cctccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    ||||||||||||||||| ||||||||||||| ||||||| ||| ||||||||    
T  42644697 cctccaatacaattttttagttcccccaaattagggggaatttgtattatga 42644646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 43572584 - 43572661
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctc 79  Q
    |||||||||||||||||| |||||| |||||||||| || |||| ||||||||   |||| |||||| |||||||||||    
T  43572584 tcctccaatacaattttttagttcctccaaatgaggagggttttgtattatga-agaaaagttaacccccaaagccctc 43572661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 36870304 - 36870189
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| ||||||||||||||||| || |||| |||| |||  |||||     || ||||||||| ||||| |||||||| | |||||    
T  36870304 tcctccaatacaattttttagttcccccaaatgaggagggttttctattttgaagaaaaataatcccaccaaagccc-ctcct-ccaatgtcctctattt 36870207  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||  ||||||||    
T  36870206 cttccactcactccttcc 36870189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 39819936 - 39819825
Alignment:
Q  3 ctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttct 102  Q
    |||||||||||||||| |||| |||||||||||| ||||||| ||||| ||   |||||| |||| |||||||  || | || |||| || |||||||||    
T  39819936 ctccaatacaattttttagtt-ccccaaatgaggaggattttgtattagga-agaaaaatgaacccccaaagcattcccttctcaatatcatttatttct 39819839  T
Q  103 tccacttgctcctt 116  Q
    |||| |||||||||    
T  39819838 tccatttgctcctt 39819825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 167
Target Start/End: Original strand, 21626362 - 21626394
Alignment:
Q  135 tccccttcaaactcccaaacaaagcctaagagt 167  Q
    |||||||||||||||||||||||||||||||||    
T  21626362 tccccttcaaactcccaaacaaagcctaagagt 21626394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 34757646 - 34757594
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    |||||||||||||||||| |||||| |||||||||| || |||| ||||||||    
T  34757646 tcctccaatacaattttttagttcctccaaatgaggagggttttgtattatga 34757594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 37194308 - 37194256
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    |||||||||||||||||| |||||| |||||||||| || |||| ||||||||    
T  37194308 tcctccaatacaattttttagttcctccaaatgaggagggttttgtattatga 37194256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 114
Target Start/End: Original strand, 16625844 - 16625934
Alignment:
Q  21 gttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccacttgctcc 114  Q
    |||||||||||||||||   |||| ||| ||||  ||||| | | || ||||||||||| |||||||||||  | |||||||||||||||||||    
T  16625844 gttcccccaaatgaggg---ttttgtatcatgaagaaaaattaaccccccaaagccctcccctcccaatgtactctatttcttccacttgctcc 16625934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 26599289 - 26599324
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagg 36  Q
    |||||||||||||||| |||||||||||||||||||    
T  26599289 tcctccaatacaatttgtgagttcccccaaatgagg 26599324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 37664618 - 37664567
Alignment:
Q  2 cctccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    ||||||||||||||||| |||||| |||||| |||| |||||| ||||||||    
T  37664618 cctccaatacaatttttaagttcctccaaataagggagattttatattatga 37664567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 26905845 - 26905733
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctc-caaagccctctcctcccaatgtcttttatt 99  Q
    |||||||||||||||||| |||||| |||||||||| || |||| ||| ||||   |||| |||||| | ||||  ||||  |||||| | || ||||||    
T  26905845 tcctccaatacaattttttagttcctccaaatgaggagggttttgtatcatga-agaaaagttaacccctcaaaatcctcctctcccattttcctttatt 26905747  T
Q  100 tcttccacttgctc 113  Q
    ||||||||||||||    
T  26905746 tcttccacttgctc 26905733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 30072102 - 30072217
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| ||||| ||||||||||| ||||||| |||| |||  |||||     |||||||| |||| | |||||||| |||| |||||    
T  30072102 tcctccaatacaattttt-agttctcccaaatgaggaggattttatattttgaagaaaaataagtcctccaaaaccct-ttctcccaatatcttctattt 30072199  T
Q  101 cttccacttgctccttcc 118  Q
    | ||||| | ||||||||    
T  30072200 catccacctactccttcc 30072217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 36574517 - 36574574
Alignment:
Q  57 aaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccacttgctcc 114  Q
    |||||| | ||||||||||||| |||||||||| || | |||||||||||||| ||||    
T  36574517 aaaaataagcctccaaagccctttcctcccaatatcctctatttcttccacttactcc 36574574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 40212041 - 40211992
Alignment:
Q  4 tccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    ||||||||||||||| |||||| |||||||||| || |||| ||||||||    
T  40212041 tccaatacaattttttagttcctccaaatgaggagggttttgtattatga 40211992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 41100145 - 41100261
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| |||| |||||||||||| || |||| ||||||||   |||| |||||| | ||| ||||| |||| || | || | |||||    
T  41100145 tcctccaatacaattttttagtt-ccccaaatgaggagggttttgtattatgatagaaaagttaacccctaaaaccctcccctcacattttcatctattt 41100243  T
Q  101 cttccacttgctccttcc 118  Q
    || |||||| ||| ||||    
T  41100244 ctcccacttactcattcc 41100261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 11373799 - 11373851
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    ||||||||| || ||||| ||||||||||||| ||||||||||  ||||||||    
T  11373799 tcctccaatgcacttttttagttcccccaaatcagggggatttggtattatga 11373851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 167
Target Start/End: Complemental strand, 13018322 - 13018290
Alignment:
Q  135 tccccttcaaactcccaaacaaagcctaagagt 167  Q
    |||||| ||||||||||||||||||||||||||    
T  13018322 tcccctccaaactcccaaacaaagcctaagagt 13018290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 31083032 - 31083064
Alignment:
Q  132 ccctccccttcaaactcccaaacaaagcctaag 164  Q
    ||||||||| |||||||||||||||||||||||    
T  31083032 ccctcccctccaaactcccaaacaaagcctaag 31083064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 32761318 - 32761430
Alignment:
Q  2 cctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttc 101  Q
    |||||||||||||||  ||||| ||  |||  ||||||||||| ||||||||  ||||| | ||||  ||||||||||| | ||||||||| | |||||     
T  32761318 cctccaatacaattt--gagtttcctaaaacaagggggattttgtattatgaagaaaaa-tgaacccacaaagccctctgcccccaatgtcctctattta 32761414  T
Q  102 ttccacttgctccttc 117  Q
    ||||||||| ||||||    
T  32761415 ttccacttgatccttc 32761430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 35499 - 35611
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttc 104  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||     
T  35499 ccaatacaatttttgagttcccc-aaatgaggggaattttttattatgagtaaaaaattaacctccaaagctctctcttcccaatgtcttctatttcttt 35597  T
Q  105 cacttgctccttcc 118  Q
    ||||||||||||||    
T  35598 cacttgctccttcc 35611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0952 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 3715 - 3871
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggatttt-ttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttctt 103  Q
    ||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||| ||||||||||| | |||||| |||||||| ||||||||    
T  3715 ccaatacaatttttgagttcccccaaatatgggggatttttttattatgagtaaaaaattatcctccaaagccttatcctccaaatgtcttctatttctt 3814  T
Q  104 ccacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcct 161  Q
    |||||||||||||||        |||||||||||||| ||||||| ||||||||||||    
T  3815 ccacttgctccttcc-ttttttccaaaaccctcccctccaaactctcaaacaaagcct 3871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 177 - 63
Alignment:
Q  5 ccaatacaatttttgagttcccccaaa-tgagggggatttttt-attatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttct 102  Q
    ||||||||||||||||||||||||||| |||||||  |||||| |||||||||||||||||||||||||||||| ||| |||||||||| || |||||||    
T  177 ccaatacaatttttgagttcccccaaaatgaggggtttttttttattatgagtaaaaaattaacctccaaagccttcttctcccaatgttttctatttct 78  T
Q  103 tccacttgctccttc 117  Q
    |||||||||||||||    
T  77 tccacttgctccttc 63  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 2416 - 2530
Alignment:
Q  5 ccaatacaatttttgagttcccccaaa-tgagggggatttt-ttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttct 102  Q
    ||||||||||||||||||||||||||| |||||||  |||| |||||||||||||||||||||||||||||||| ||| |||||||||| || |||||||    
T  2416 ccaatacaatttttgagttcccccaaaatgaggggtttttttttattatgagtaaaaaattaacctccaaagccttcttctcccaatgttttctatttct 2515  T
Q  103 tccacttgctccttc 117  Q
    |||||||||||||||    
T  2516 tccacttgctccttc 2530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0636 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0636
Description:

Target: scaffold0636; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 8437 - 8334
Alignment:
Q  6 caatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttcc 105  Q
    ||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||| ||||||| | ||||||| |||| |||| ||||||||||    
T  8437 caatacaatttttgaattcccccaaatgagtggaattttttattatgagtaaaaaattaacatccaaagtcatctcctctcaatatcttctatttcttcc 8338  T
Q  106 actt 109  Q
    ||||    
T  8337 actt 8334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 1615 - 1548
Alignment:
Q  5 ccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaa 73  Q
    ||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||    
T  1615 ccaatacaatttttgagttcctccatatgagggggat-ttttattatgagtaaaaaattaacctccaaa 1548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 2063 - 2179
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| |||||| |||||||||| || |||| ||||||||   |||| |||||| |||||||||||  |||||| | |||| |||||    
T  2063 tcctccaatacaatttttcagttcctccaaatgaggagggttttgtattatga-agaaaagttaacccccaaagccctcctctcccattttcttctattt 2161  T
Q  101 cttccacttgctccttcc 118  Q
    ||||||||||||| ||||    
T  2162 cttccacttgctcattcc 2179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 67896 - 67821
Alignment:
Q  43 ttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccacttgctccttcc 118  Q
    |||||||||||||||||||||||||||||||  |||||| || |||| |||| ||||||||| |||| ||||||||    
T  67896 ttttattatgagtaaaaaattaacctccaaaatcctctcttcacaatatcttctatttcttcaacttactccttcc 67821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 76001 - 75926
Alignment:
Q  43 ttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccacttgctccttcc 118  Q
    |||||||||||||||||||||||||||||||   ||||| || |||| |||| ||||||||| |||| ||||||||    
T  76001 ttttattatgagtaaaaaattaacctccaaaattctctcttctcaatatcttctatttcttcaacttactccttcc 75926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 107761 - 107836
Alignment:
Q  43 ttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccacttgctccttcc 118  Q
    |||||||||||||||||||||||||||||||   ||||| ||||||| |||| ||||||||| |||| ||||||||    
T  107761 ttttattatgagtaaaaaattaacctccaaaattctctcttcccaatatcttctatttcttcaacttactccttcc 107836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 82837 - 82720
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctcc-aaagccctctcctcccaatgtcttttatt 99  Q
    ||||||||||||||||| |||||||| ||||| ||| ||||||| ||||||||   |||||| |||| || |||||||| | ||| ||| ||| | ||||    
T  82837 tcctccaatacaattttggagttccctcaaattaggaggattttgtattatga-agaaaaataaacccccgaaagcccttttctctcaaagtcatctatt 82739  T
Q  100 tcttccacttgctccttcc 118  Q
    |||||||||||||||||||    
T  82738 tcttccacttgctccttcc 82720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 29285 - 29120
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| |||||| |||||||| | || |||| ||||||||   |||| ||||||  |||||||||   |||||| | |||| |||||    
T  29285 tcctccaatacaattttttagttcctccaaatgatgagggttttgtattatga-agaaaagttaaccctcaaagcccttctctcccattttcttctattt 29187  T
Q  101 cttccacttgctccttccnnnnnnnncaaaaccctccccttcaaactcccaaacaaagcctaagagta 168  Q
    ||||||||||||| ||||        | ||||| | |||| ||||||| |||||||||||||||||||    
T  29186 cttccacttgctcattcc-ttttttcctaaacctttccctccaaactcgcaaacaaagcctaagagta 29120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 74730 - 74782
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    |||||||||||||||||| ||||||| ||||| ||||||||||| ||||||||    
T  74730 tcctccaatacaatttttcagttccctcaaattagggggattttgtattatga 74782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1163 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1163
Description:

Target: scaffold1163; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 2041 - 1982
Alignment:
Q  59 aaattaacctccaaagccctctcctcccaatgtcttttatttcttccacttgctccttcc 118  Q
    |||| |||| ||||||||||| ||||||| | |||| |||||||||||||||||||||||    
T  2041 aaatcaacccccaaagccctcccctcccattttcttctatttcttccacttgctccttcc 1982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 236 - 346
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttattt 100  Q
    |||||||||||||||||| |||||| |||||| ||| || |||| ||||||||   |||| |||||| ||||||| |||  |||||| | || | |||||    
T  236 tcctccaatacaattttttagttcctccaaataaggagggttttgtattatga-agaaaagttaacccccaaagctctcctctcccattttcctctattt 334  T
Q  101 cttccacttgct 112  Q
    ||||||||||||    
T  335 cttccacttgct 346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0245 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 4057 - 4025
Alignment:
Q  132 ccctccccttcaaactcccaaacaaagcctaag 164  Q
    ||||||||| |||||||||||||||||||||||    
T  4057 ccctcccctccaaactcccaaacaaagcctaag 4025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 4388 - 4356
Alignment:
Q  132 ccctccccttcaaactcccaaacaaagcctaag 164  Q
    ||||||||| |||||||||||||||||||||||    
T  4388 ccctcccctccaaactcccaaacaaagcctaag 4356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 29; Significance: 0.0000006; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 6797 - 6849
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    |||||||||||||| ||| |||||| |||||||||| || |||| ||||||||    
T  6797 tcctccaatacaatgttttagttcctccaaatgaggagggttttgtattatga 6849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7780 - 7832
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    |||||||||||||| ||| |||||| |||||||||| || |||| ||||||||    
T  7780 tcctccaatacaatgttttagttcctccaaatgaggagggttttgtattatga 7832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 93546 - 93598
Alignment:
Q  1 tcctccaatacaatttttgagttcccccaaatgagggggattttttattatga 53  Q
    |||||||||||||||||| |||||| |||||||||| |  |||| ||||||||    
T  93546 tcctccaatacaattttttagttcctccaaatgaggagagttttgtattatga 93598  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 59701 - 59669
Alignment:
Q  132 ccctccccttcaaactcccaaacaaagcctaag 164  Q
    ||||||||| |||||||||||||||||||||||    
T  59701 ccctcccctccaaactcccaaacaaagcctaag 59669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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