View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16569_low_59 (Length: 335)
Name: NF16569_low_59
Description: NF16569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16569_low_59 |
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Alignment Details
Target: chr7 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 24506516 - 24506851
Alignment:
| Q |
1 |
catcaagtgccttattcttctctgatgcatgcagtctcatggtaagttgtcttgaaggattcattctctgattgaagttcggtaaagagagaaaggttat |
100 |
Q |
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| T |
24506516 |
catcaagtgccttattcttctctgatgta----gtctcatggtaagttgtcttgaacgattcattctctgattgaagttcggtaaagagagaaaggttat |
24506611 |
T |
|
| Q |
101 |
tcaaagcatgttgaaactgctccctgaaacccaaatagtccat----------------acaagacctacttgttcatacatttgacattgagaaatgag |
184 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||| |
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| T |
24506612 |
tcaaagcatgttgaaactgctccctgaaacccaaatagtccatcgacatgtcattcaacaaaagacctacttgttcataaatttgacattgagaaatgag |
24506711 |
T |
|
| Q |
185 |
aacatcagcgacatcctcggtcgattcatcaatgtctaaagggaaattatttccttcgttttggtagagatgttcgttcggacagctgcattgctaaaac |
284 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24506712 |
aacatcagcgacatcctcagtcgattcatcaatgtctaaagggaaattacttccttcgttttggtagagatgttcgttcggacagctgcattgctaaaac |
24506811 |
T |
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| Q |
285 |
ttggtcgtccccaacgaaatacttgttttgatcttcctat |
324 |
Q |
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||||||||||||||||||||||||||||||||||| |||| |
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| T |
24506812 |
ttggtcgtccccaacgaaatacttgttttgatctttctat |
24506851 |
T |
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