View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16569_low_71 (Length: 314)

Name: NF16569_low_71
Description: NF16569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16569_low_71
NF16569_low_71
[»] chr6 (53 HSPs)
chr6 (20-299)||(27603584-27603863)
chr6 (20-299)||(26803469-26803748)
chr6 (20-299)||(28787261-28787540)
chr6 (20-299)||(28793382-28793661)
chr6 (20-299)||(26647502-26647781)
chr6 (20-299)||(26753470-26753749)
chr6 (52-287)||(26824874-26825109)
chr6 (20-299)||(31285582-31285861)
chr6 (20-296)||(27679973-27680249)
chr6 (20-299)||(26624294-26624573)
chr6 (20-299)||(26730271-26730550)
chr6 (20-295)||(27336979-27337254)
chr6 (20-295)||(27397719-27397994)
chr6 (20-299)||(27717379-27717658)
chr6 (33-299)||(27705134-27705400)
chr6 (20-299)||(27610000-27610279)
chr6 (20-302)||(27591898-27592180)
chr6 (20-294)||(26885093-26885364)
chr6 (34-302)||(27676497-27676765)
chr6 (20-299)||(27426492-27426771)
chr6 (20-299)||(27697466-27697745)
chr6 (22-299)||(26862605-26862882)
chr6 (48-287)||(26657016-26657252)
chr6 (48-287)||(26762987-26763223)
chr6 (20-299)||(25492199-25492478)
chr6 (20-242)||(26143891-26144113)
chr6 (20-225)||(25580745-25580950)
chr6 (20-242)||(25484082-25484304)
chr6 (209-302)||(26636858-26636951)
chr6 (209-302)||(26742824-26742917)
chr6 (20-244)||(27530239-27530460)
chr6 (209-299)||(26849924-26850014)
chr6 (20-110)||(28782124-28782214)
chr6 (209-302)||(26960337-26960430)
chr6 (209-302)||(27664091-27664184)
chr6 (20-244)||(26056945-26057169)
chr6 (20-244)||(26076915-26077139)
chr6 (141-300)||(28326622-28326781)
chr6 (141-300)||(28504258-28504417)
chr6 (20-242)||(25539566-25539788)
chr6 (209-302)||(26950955-26951048)
chr6 (20-244)||(25511915-25512138)
chr6 (141-299)||(28186538-28186696)
chr6 (209-283)||(25075079-25075153)
chr6 (141-286)||(28296633-28296778)
chr6 (141-286)||(28515295-28515440)
chr6 (209-285)||(28140747-28140823)
chr6 (20-111)||(27215475-27215566)
chr6 (229-282)||(28240589-28240642)
chr6 (228-296)||(26812759-26812827)
chr6 (252-286)||(28182373-28182407)
chr6 (229-302)||(26978612-26978685)
chr6 (49-81)||(27664303-27664335)
[»] scaffold0277 (2 HSPs)
scaffold0277 (20-299)||(3592-3871)
scaffold0277 (20-299)||(12555-12834)
[»] chr8 (1 HSPs)
chr8 (20-299)||(29272718-29272997)
[»] scaffold0419 (1 HSPs)
scaffold0419 (20-299)||(8510-8789)
[»] scaffold0349 (1 HSPs)
scaffold0349 (20-299)||(2419-2698)
[»] chr1 (5 HSPs)
chr1 (20-299)||(28126555-28126834)
chr1 (20-257)||(28163298-28163535)
chr1 (20-299)||(267220-267499)
chr1 (209-285)||(26137100-26137176)
chr1 (142-176)||(26137033-26137067)
[»] chr4 (8 HSPs)
chr4 (20-302)||(18722958-18723240)
chr4 (20-299)||(18074784-18075063)
chr4 (20-302)||(18654350-18654632)
chr4 (20-287)||(18698288-18698555)
chr4 (20-287)||(18730392-18730659)
chr4 (48-286)||(18678449-18678687)
chr4 (145-287)||(18688514-18688656)
chr4 (20-91)||(5090038-5090109)
[»] scaffold0003 (1 HSPs)
scaffold0003 (20-299)||(60592-60871)
[»] scaffold1870 (1 HSPs)
scaffold1870 (229-299)||(1-71)
[»] chr5 (1 HSPs)
chr5 (19-299)||(16691889-16692169)
[»] scaffold0019 (1 HSPs)
scaffold0019 (141-299)||(57174-57332)
[»] chr2 (1 HSPs)
chr2 (209-285)||(17992109-17992185)
[»] scaffold0038 (1 HSPs)
scaffold0038 (229-282)||(40751-40804)


Alignment Details
Target: chr6 (Bit Score: 248; Significance: 1e-138; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 20 - 299
Target Start/End: Complemental strand, 27603863 - 27603584
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27603863 tggcaggagaacctgattggtttgggcttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 27603764  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27603763 attagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 27603664  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatg 299  Q
    ||||||||||||||||| || |||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  27603663 gcagtttcatatgcttcaggacttcccttagttttggaagtagtgggttccaacttgtttggaaagaggatagaagaatg 27603584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 20 - 299
Target Start/End: Original strand, 26803469 - 26803748
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||  |||||    
T  26803469 tggctggaggacctgattggtttggccatggaagcagggtcatcattaccactcgagacaaacatttactgaccagtcatgatatagaaagaacatatgc 26803568  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    |||||| ||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||| ||||||| |||    
T  26803569 agtagaggggttgtatgggacagaagctcttgaattgttgaggtggatggcttttaaaaataacaaagtaccttcaagttatgaagacattttaaatcgt 26803668  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatg 299  Q
    ||||||||||||||||| || |||| ||||||||||||  |||| ||||||||||||||||||||||| ||| |||||||    
T  26803669 gcagtttcatatgcttcaggtcttcccttagttttagagatagtgggttccaacttgtttggaaagagcataaaagaatg 26803748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 20 - 299
Target Start/End: Original strand, 28787261 - 28787540
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    |||| |||| |||||||||||| |||| ||||||||||||||||||||| |||||||||| |||||||||||  |||||||  |||||||| |   |||     
T  28787261 tggcaggaggacctgattggttcggccgtggaagcagggtcatcattacgactcgagacaaacacttactaagaagtcatgggatagaaagtacacatga 28787360  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    |||  ||||| ||| | |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||| |||    
T  28787361 agtgaaagggctgtatgggacagaagctcttgagttgttgagatggatggcttttaagaataacaaagtaccttcaagttatgaagacgttttaaatcgt 28787460  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatg 299  Q
    |||||||| |||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  28787461 gcagtttcttatgcttcgggccttcccttagttttagaaatagtgggttccaacttgtttggaaagacgatagaagaatg 28787540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 20 - 299
Target Start/End: Original strand, 28793382 - 28793661
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    |||| |||| |||||||||||| |||| ||||||||||||||||||||| |||||||||| |||||||||||  |||||||  |||||||| |   |||     
T  28793382 tggcaggaggacctgattggttcggccgtggaagcagggtcatcattacgactcgagacaaacacttactaagaagtcatgggatagaaagtacacatga 28793481  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    |||  ||||| ||| | |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||| |||    
T  28793482 agtgaaagggctgtatgggacagaagctcttgagttgttgagatggatggcttttaagaataacaaagtaccttcaagttatgaagacgttttaaatcgt 28793581  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatg 299  Q
    |||||||| |||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  28793582 gcagtttcgtatgcttcgggccttcccttagttttagaaatagtgggttccaacttgtttggaaagacgatagaagaatg 28793661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 20 - 299
Target Start/End: Original strand, 26647502 - 26647781
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| || ||||||||| || | ||||||||| |||||||| ||||| ||||| | ||||||||||||| ||||||  ||||||||||  |||||    
T  26647502 tggctggaggacttgattggttcggtcctggaagcagagtcatcatcaccacccgagataaacacttactaacctgtcatgggatagaaagaacatatgc 26647601  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    ||||  |||| | | | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||  ||||||||||||||||||||||    
T  26647602 agtaagagggctatatgggacagaagctcttgaattgttgaggtggatggcgtttaagaataacaaagtaccgccaagttatgaagacgttttaaaccgt 26647701  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatg 299  Q
    ||||||||||||||||| ||||||| ||||||||||||| |||| ||||||||||| | ||||||||| |||||||||||    
T  26647702 gcagtttcatatgcttcaggccttcccttagttttagaaatagtgggttccaacttatatggaaagagcatagaagaatg 26647781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 20 - 299
Target Start/End: Original strand, 26753470 - 26753749
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| || ||||||||| || | ||||||||| |||||||| ||||| ||||| | ||||||||||||| ||||||  ||||||||||  |||||    
T  26753470 tggctggaggacttgattggttcggtcctggaagcagagtcatcatcaccacccgagataaacacttactaacctgtcatgggatagaaagaacatatgc 26753569  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    ||||  |||| | | | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||  ||||||||||||||||||||||    
T  26753570 agtaagagggctatatgggacagaagctcttgaattgttgaggtggatggcgtttaagaataacaaagtaccgccaagttatgaagacgttttaaaccgt 26753669  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatg 299  Q
    ||||||||||||||||| ||||||| ||||||||||||| |||| ||||||||||| | ||||||||| |||||||||||    
T  26753670 gcagtttcatatgcttcaggccttcccttagttttagaaatagtgggttccaacttatatggaaagagcatagaagaatg 26753749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 52 - 287
Target Start/End: Original strand, 26824874 - 26825109
Alignment:
Q  52 agcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgcagtagaagggttgtgtaggacagaagctcttg 151  Q
    ||||| ||||||||||| |||||||||| ||| ||||| |||| |||||| ||||||  || ||||| |||||||||||||| | |||||||||||||||    
T  26824874 agcagagtcatcattacaactcgagacaaacaattacttaccaatcatgagatagaattaatgtatgaagtagaagggttgtatgggacagaagctcttg 26824973  T
Q  152 aattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgtgcagtttcatatgcttcgggccttcgcttagt 251  Q
    ||||||| ||||||||||||||||| |||||||||||||| |||  ||||||| || |||||||||||||||||||||||||||||||||||| ||||||    
T  26824974 aattgttaaggtggatggcttttaaaaataacaaagtaccgtcaagttatgaacacattttaaaccgtgcagtttcatatgcttcgggccttcccttagt 26825073  T
Q  252 tttagaagtagttggttccaacttgtttggaaagag 287  Q
     |||||| |||| |||||||| ||||||||||||||    
T  26825074 attagaaatagtgggttccaatttgtttggaaagag 26825109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 20 - 299
Target Start/End: Original strand, 31285582 - 31285861
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| || ||||||||| |||| ||||||||| |||||||||||||||||||||| |||||||||||  |||||||  ||| |||| |   ||||    
T  31285582 tggctggaggacttgattggttcggccgtggaagcagagtcatcattaccactcgagacaaacacttactaagtagtcatgggataaaaagtacacatgc 31285681  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    |||||||||||||  | |||| ||||||||||||||||| ||||||||||||||||| | | ||||||| ||||||| ||| |||||| |||||||||||    
T  31285682 agtagaagggttgaatgggactgaagctcttgaattgttaaggtggatggcttttaaaagtgacaaagttccttcaggttacgaagacattttaaaccgt 31285781  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatg 299  Q
    |||||| ||||| |||| |||||||  |||||| |||||||||| ||||| ||||||||||||||||| |||||| ||||    
T  31285782 gcagttgcatattcttctggccttccattagttatagaagtagtgggttcaaacttgtttggaaagagcatagaaaaatg 31285861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 20 - 296
Target Start/End: Original strand, 27679973 - 27680249
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| || ||||||||| ||   ||||||||| |||||||||||||||||| ||| | ||||||||| ||||||||  |||||||| |   ||||    
T  27679973 tggctggaggacttgattggttcggatgtggaagcagagtcatcattaccactcgaaacaaagacttactaagcagtcatggcatagaaagtacacatgc 27680072  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    |||||||||||||  |  ||||||||||||||||||||||||||||||||||||||| | | | ||||| ||||||| ||| |||||| |||||||||||    
T  27680073 agtagaagggttgaatgagacagaagctcttgaattgttgaggtggatggcttttaaaagtgataaagttccttcaggttacgaagacattttaaaccgt 27680172  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaaga 296  Q
    |||||| |||||||||  |||||||  ||||||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  27680173 gcagttgcatatgcttttggccttccgttagttttagaagtagtgggttctaacttgtttggaaagagcatagaaga 27680249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 20 - 299
Target Start/End: Original strand, 26624294 - 26624573
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    |||||||||  | ||||||||| || | ||||||||||||||| |||||||||||| ||| |||| |||||| || |||||  ||| |||| |   ||||    
T  26624294 tggctggagggcttgattggttcggacgtggaagcagggtcataattaccactcgaaacaaacacctactaagcactcatgggataaaaagcacacatgc 26624393  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    |||||||||||||| | ||||||| | || ||||||||||||||||||||||||||| | | ||||||| ||||||| |||||||||| |||||||||||    
T  26624394 agtagaagggttgtatgggacagacggtcatgaattgttgaggtggatggcttttaaaagtgacaaagttccttcaggttatgaagacattttaaaccgt 26624493  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatg 299  Q
    |||||| |||||||||| |||||||  |||||||||||| | || ||||||||||||||||||||||| |||||||||||    
T  26624494 gcagttgcatatgcttctggccttccgttagttttagaaattgtgggttccaacttgtttggaaagagcatagaagaatg 26624573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 20 - 299
Target Start/End: Original strand, 26730271 - 26730550
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    |||||||||  | ||||||||| || | ||||||||||||||| |||||||||||| ||| |||| |||||| || |||||  ||| |||| |   ||||    
T  26730271 tggctggagggcttgattggttcggacgtggaagcagggtcataattaccactcgaaacaaacacctactaagcactcatgggataaaaagcacacatgc 26730370  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    |||||||||||||| | ||||||| | || ||||||||||||||||||||||||||| | | ||||||| ||||||| |||||||||| |||||||||||    
T  26730371 agtagaagggttgtatgggacagacggtcatgaattgttgaggtggatggcttttaaaagtgacaaagttccttcaggttatgaagacattttaaaccgt 26730470  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatg 299  Q
    |||||| |||||||||| |||||||  |||||||||||| | || ||||||||||||||||||||||| |||||||||||    
T  26730471 gcagttgcatatgcttctggccttccgttagttttagaaattgtgggttccaacttgtttggaaagagcatagaagaatg 26730550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 20 - 295
Target Start/End: Complemental strand, 27337254 - 27336979
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| || ||||||||| || | ||||||||| |||||||| ||||| ||||| | ||||||||||||| ||||||  ||||||||||  |||||    
T  27337254 tggctggaggacttgattggttcggtcctggaagcagagtcatcatcaccacccgagataaacacttactaacctgtcatgggatagaaagaacatatgc 27337155  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    ||||  |||| | | | |||  ||||||||||||||||||||||||| ||||||||||||||||||||||||  ||  ||||||||| ||||||||||||    
T  27337154 agtaagagggctatatgggaaggaagctcttgaattgttgaggtggacggcttttaagaataacaaagtaccgccaagttatgaagatgttttaaaccgt 27337055  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaag 295  Q
    ||||||||||||| ||||||| ||| ||||||||||||| |||| ||||| ||||||||||||||||  |||||||    
T  27337054 gcagtttcatatggttcgggcattcccttagttttagaaatagtgggttctaacttgtttggaaagaacatagaag 27336979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 20 - 295
Target Start/End: Complemental strand, 27397994 - 27397719
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| || ||||||||| || | ||||||||| |||||||| ||||| ||||| | ||||||||||||| ||||||  ||||||||||  |||||    
T  27397994 tggctggaggacttgattggttcggtcctggaagcagagtcatcatcaccacccgagataaacacttactaacctgtcatgggatagaaagaacatatgc 27397895  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    ||||  |||| | | | |||  ||||||||||||||||||||||||| ||||||||||||||||||||||||  ||  ||||||||| ||||||||||||    
T  27397894 agtaagagggctatatgggaaggaagctcttgaattgttgaggtggacggcttttaagaataacaaagtaccgccaagttatgaagatgttttaaaccgt 27397795  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaag 295  Q
    ||||||||||||| ||||||| ||| ||||||||||||| |||| ||||| ||||||||||||||||  |||||||    
T  27397794 gcagtttcatatggttcgggcattcccttagttttagaaatagtgggttctaacttgtttggaaagaacatagaag 27397719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 20 - 299
Target Start/End: Complemental strand, 27717658 - 27717379
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| |||||||||||| |||| ||||||||  |||||||||||||||||||||| ||||||||||||| ||||||  ||| |||| | | |||     
T  27717658 tggctggaggacctgattggttcggccgtggaagcaaagtcatcattaccactcgagacaaacacttactaacctgtcatgggataaaaagtatgcatga 27717559  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||| | | |||| || ||||||| ||| |||||  |||||||||||    
T  27717558 agtagaagggttgtatgggacagaagctcttgaattgttgaggtggatggcttttaaaagtgacaatgttccttcaggttacgaagagattttaaaccgt 27717459  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatg 299  Q
    |||||| |||||||||| |||||||  |||||| ||||| |||| ||||| ||||| | ||||||||  ||||| |||||    
T  27717458 gcagttgcatatgcttctggccttccgttagttatagaaatagtgggttctaacttatctggaaagaacatagaggaatg 27717379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 33 - 299
Target Start/End: Complemental strand, 27705400 - 27705134
Alignment:
Q  33 tgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgcagtagaagggttg 132  Q
    |||||||||||||| ||||||||| || ||||| ||||||||| | | |||||||||| ||  ||||   ||||||| ||  ||| ||||||||||||||    
T  27705400 tgattggtttggccctggaagcagagttatcatcaccactcgaaataaacacttactagcctctcataggatagaaaaaacatatccagtagaagggttg 27705301  T
Q  133 tgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgtgcagtttcatatg 232  Q
      | ||| ||| |||||||||||||||||||||||||||||||| ||| |||| || ||||||| |||||||||| ||||||||||||||||| ||||||    
T  27705300 aatgggatagatgctcttgaattgttgaggtggatggcttttaaaaatgacaacgttccttcaggttatgaagacattttaaaccgtgcagttgcatatg 27705201  T
Q  233 cttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatg 299  Q
    |||| |||||||  ||||||||||||||| | ||||| ||||||||||| ||||  |||||||||||    
T  27705200 cttctggccttccgttagttttagaagtaatgggttctaacttgtttggcaagaacatagaagaatg 27705134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 20 - 299
Target Start/End: Complemental strand, 27610279 - 27610000
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| |||||||||||| |||| ||||||||  ||||||||| |||||||||||| |||||| |||||| ||||||  ||| |||| | | ||      
T  27610279 tggctggaggacctgattggttcggccgtggaagcaaagtcatcattgccactcgagacaaacacttgctaacctgtcatgggataaaaagtatgcataa 27610180  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    ||| |||||| ||| | |||||||||||||||||||||||||||||||||||||||| | | |||| || ||||||| ||| |||||  |||||||||||    
T  27610179 agtggaagggctgtatgggacagaagctcttgaattgttgaggtggatggcttttaaaagtgacaatgttccttcaggttacgaagagattttaaaccgt 27610080  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatg 299  Q
    || ||| |||||||||| |||||||  |||||| ||||| |||| ||||| ||||||||||||||||  ||||| |||||    
T  27610079 gctgttgcatatgcttctggccttccgttagttatagaaatagtgggttctaacttgtttggaaagaacatagaggaatg 27610000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 20 - 302
Target Start/End: Complemental strand, 27592180 - 27591898
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| || ||||||||| || | ||||||||| |||||||| ||||| ||||| | ||||||||||  | ||||||  ||||||| ||  |||||    
T  27592180 tggctggaggacttgattggttcggtcctggaagcagagtcatcatcaccacccgagataaacacttactagactgtcatgggatagaaaaaacatatgc 27592081  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    |||||||| ||||  | |||||||||||||||||||||||||||||| ||||||||| ||| | ||||| ||||||  |||||||||| ||||||| |||    
T  27592080 agtagaagagttgaatgggacagaagctcttgaattgttgaggtggaaggcttttaaaaatgagaaagttccttcaagttatgaagacattttaaagcgt 27591981  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatgtga 302  Q
    ||||||  ||||||||| |||||||  ||||   |||||||||| ||||| ||||||||||||||||| || | |||||||||    
T  27591980 gcagttgtatatgcttctggccttccattagcgatagaagtagtgggttctaacttgtttggaaagagtattgcagaatgtga 27591898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 20 - 294
Target Start/End: Original strand, 26885093 - 26885364
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| || |||||||||||| | ||||||||||||||||||||||||||| || | ||||||||||||  | |||    |||| ||||  ||||     
T  26885093 tggctggaggacttgattggtttggtcgtggaagcagggtcatcattaccactcgtgataaacacttactaacgtgccatagggtagatagaacatatga 26885192  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    |||||||||| | | | ||| ||||||| ||||||||||||||||| |||| |||||  |   |||||| |||| || |||||||||  |||||||||||    
T  26885193 agtagaagggatatatgggaaagaagcttttgaattgttgaggtggctggcctttaaaga---caaagttcctttaggttatgaagagattttaaaccgt 26885289  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaa 294  Q
    |||||||||||||||||||||||||  |||||| ||||| |||| ||||||||||||||||||||||| ||||||    
T  26885290 gcagtttcatatgcttcgggccttcctttagttatagaaatagtgggttccaacttgtttggaaagagcatagaa 26885364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 34 - 302
Target Start/End: Complemental strand, 27676765 - 27676497
Alignment:
Q  34 gattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgcagtagaagggttgt 133  Q
    ||||||||||| | ||||||||| |||||||| ||||| ||||| | ||||||||||  | ||||||  ||||||| ||  ||||||||||||| ||||     
T  27676765 gattggtttggtcctggaagcagagtcatcatcaccacccgagataaacacttactagactgtcatgggatagaaaaaacatatgcagtagaagagttga 27676666  T
Q  134 gtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgtgcagtttcatatgc 233  Q
     |  ||||||||||||||||||||||||||||| ||||||||| ||| | ||||| ||||||  |||||||||| ||||||| |||||||||  ||||||    
T  27676665 atgagacagaagctcttgaattgttgaggtggaaggcttttaaaaatgagaaagttccttcaagttatgaagacattttaaagcgtgcagttgtatatgc 27676566  T
Q  234 ttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatgtga 302  Q
    ||| |||||||  ||||   |||||||||| ||||| ||||||||||||||||| || | |||||||||    
T  27676565 ttctggccttccattagcgatagaagtagtgggttctaacttgtttggaaagagtattgcagaatgtga 27676497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 20 - 299
Target Start/End: Complemental strand, 27426771 - 27426492
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| |  ||||||||| || | ||||||| | |||||||| ||||| ||||| | |||||||||| || ||||||| ||||||| ||  |||||    
T  27426771 tggctggaggagttgattggttcggtcctggaagccgagtcatcatcaccacccgagataaacacttactagcctgtcatgagatagaaaaaacatatgc 27426672  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    |||| ||||||||  |  ||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||  ||||||| |  |||| || |||    
T  27426671 agtaaaagggttgaatgtgacagaagctcttgaattgttgaggtggatggcttttaaaaatgacaaagttccttcaagttatgaaaagattttgaatcgt 27426572  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatg 299  Q
    | |||| | |||||||| |||||||   ||||| ||||| |||| ||||| ||||||||||||||||  |||||||||||    
T  27426571 gtagttgcttatgcttctggccttccggtagttatagaaatagtgggttctaacttgtttggaaagaacatagaagaatg 27426492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 20 - 299
Target Start/End: Complemental strand, 27697745 - 27697466
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttacta-accagtcatgatatagaaagaaagtatg 118  Q
    ||||||||| ||  ||||||||||| | ||||||||| |||||||| ||||| ||||| | |||||||||| |||| |||||  ||||||| || |||||    
T  27697745 tggctggaggactcgattggtttggtcctggaagcagagtcatcatcaccacccgagataaacacttactagacca-tcatgggatagaaaaaacgtatg 27697647  T
Q  119 cagtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccg 218  Q
    ||||| ||||||||  | |||||||||||||||||||||||||||||||||||||||| | | |||| || || |||   ||  ||||  ||||||  ||    
T  27697646 cagtaaaagggttgaatgggacagaagctcttgaattgttgaggtggatggcttttaaaagtgacaatgttccatcaaggtacaaagagattttaagtcg 27697547  T
Q  219 tgcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatg 299  Q
    |||||||||||||| ||| |||||||  |||||| ||||| |||| ||||| ||||||||||||||||  |||||||||||    
T  27697546 tgcagtttcatatgtttctggccttccgttagttatagaaatagtgggttctaacttgtttggaaagaacatagaagaatg 27697466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 22 - 299
Target Start/End: Original strand, 26862605 - 26862882
Alignment:
Q  22 gctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgcag 121  Q
    ||||||| || |||||||||||| | |||||| || |||||||||||||||||||| | ||||||||||||  | ||||  ||||||||||  ||||| |    
T  26862605 gctggaggacttgattggtttggtcatggaagtagagtcatcattaccactcgagataaacacttactaacatgccatgggatagaaagaacatatgcgg 26862704  T
Q  122 tagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgtgc 221  Q
    || | ||| |   |  |||||||||| |||||||||||||||||||||||||||| |||    |||| |||||   |||| | || ||||||||||||||    
T  26862705 taaacgggctacatgagacagaagcttttgaattgttgaggtggatggcttttaaaaatggtgaagttccttcgagttataacgatgttttaaaccgtgc 26862804  T
Q  222 agtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatg 299  Q
    |||| |||||||||| |||||||  |||||| | ||| |||| ||||| ||||||||||||||||| || ||||||||    
T  26862805 agttgcatatgcttccggccttccgttagttctcgaaatagtgggttctaacttgtttggaaagagcatggaagaatg 26862882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 48 - 287
Target Start/End: Original strand, 26657016 - 26657252
Alignment:
Q  48 tggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgcagtagaagggttgtgtaggacagaagct 147  Q
    ||||||||| ||||||||||||||| |||| | |||||| |||| | |||| |  ||||||| ||  ||||| ||| ||||| | | | ||||||||||     
T  26657016 tggaagcagagtcatcattaccactagagataaacacttgctaaactgtcacgggatagaaataacatatgccgtaaaagggctatatgggacagaagca 26657115  T
Q  148 cttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgtgcagtttcatatgcttcgggccttcgct 247  Q
    |||||||||||||| ||||||||||||| ||   |||| || ||||||| |||||||||  |||||| ||||||||||||||||||||| || |||| ||    
T  26657116 cttgaattgttgagatggatggctttta-gag--acaatgttccttcaggttatgaagaaattttaagccgtgcagtttcatatgcttcaggacttccct 26657212  T
Q  248 tagttttagaagtagttggttccaacttgtttggaaagag 287  Q
    ||||| |||||||||| | ||| |||||||||||||||||    
T  26657213 tagttatagaagtagtggcttcaaacttgtttggaaagag 26657252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 48 - 287
Target Start/End: Original strand, 26762987 - 26763223
Alignment:
Q  48 tggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgcagtagaagggttgtgtaggacagaagct 147  Q
    ||||||||| ||||||||||||||| |||| | |||||| |||| | |||| |  ||||||| ||  ||||| ||| ||||| | | | ||||||||||     
T  26762987 tggaagcagagtcatcattaccactagagataaacacttgctaaactgtcacgggatagaaataacatatgccgtaaaagggctatatgggacagaagca 26763086  T
Q  148 cttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgtgcagtttcatatgcttcgggccttcgct 247  Q
    |||||||||||||| ||||||||||||| ||   |||| || ||||||| |||||||||  |||||| ||||||||||||||||||||| || |||| ||    
T  26763087 cttgaattgttgagatggatggctttta-gag--acaatgttccttcaggttatgaagaaattttaagccgtgcagtttcatatgcttcaggacttccct 26763183  T
Q  248 tagttttagaagtagttggttccaacttgtttggaaagag 287  Q
    ||||| |||||||||| | ||| |||||||||||||||||    
T  26763184 tagttatagaagtagtggcttcaaacttgtttggaaagag 26763223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 299
Target Start/End: Complemental strand, 25492478 - 25492199
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    |||||| || || ||||||||| || | ||||||| | || ||||||||||||||||||| |||| |||||||||||||||  |||||||| | | ||||    
T  25492478 tggctgaaggacttgattggttcggtcgtggaagcggagttatcattaccactcgagacaaacacatactaaccagtcatgggatagaaagtatgcatgc 25492379  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    |||||||| ||||  | ||  |||||||||||||||| | | ||||||||||||||| ||| ||| ||| |||||| ||||||||||| ||||||  | |    
T  25492378 agtagaagagttgcatggggaagaagctcttgaattgcttatgtggatggcttttaaaaatgacagagttccttcaatttatgaagacattttaacactt 25492279  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatg 299  Q
    ||| || | |||||||| |||||||  |||| ||||| | || | || || || ||||||||||| || |||||||||||    
T  25492278 gcaattacctatgcttctggccttccattagctttagtaataatagggtcaaatttgtttggaaatagcatagaagaatg 25492199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 26143891 - 26144113
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| || ||||||||| || | ||||||||||||||||||||||||||| || | |||||||||| || ||||||  ||   ||| |   ||||    
T  26143891 tggctggaggacttgattggttcggtcatggaagcagggtcatcattaccactcgtgataaacacttactagcctgtcatgggattacaagtacacatgc 26143990  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    ||||||||  |||  |  ||||||||||||||||||||||||| | ||||||||||| ||| ||||||| ||||||  |||||||||  |||||||||||    
T  26143991 agtagaagaattgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagaaattttaaaccgt 26144090  T
Q  220 gcagtttcatatgcttcgggcct 242  Q
    | |||| | ||||| || |||||    
T  26144091 gtagttacttatgcatctggcct 26144113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 20 - 225
Target Start/End: Original strand, 25580745 - 25580950
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| || ||||||||| || | ||||||||| ||||||||||||||||| || | |||||||||| || ||||||  ||   ||| |   ||||    
T  25580745 tggctggaggacttgattggttcggtcatggaagcagtgtcatcattaccactcgtgataaacacttactagcctgtcatgggattacaagtacacatgc 25580844  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    ||||||||  |||  |  ||||||||||||||||||||||||| | ||||||||||| ||| ||||||| |||||| ||||||||||  |||||||||||    
T  25580845 agtagaagaattgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaatttatgaagagattttaaaccgt 25580944  T
Q  220 gcagtt 225  Q
    | ||||    
T  25580945 gtagtt 25580950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 25484082 - 25484304
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| || ||||||||| || | ||||||||| ||||||||||||||||| || | |||||||||| || ||||||  ||   ||| |   ||||    
T  25484082 tggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaacacttactagcctgtcatgggattacaagtacacatgc 25484181  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    ||||||||  |||  |  ||||||||||||||||||||||||| | ||||||||||| ||| ||||||| ||||||  |||||||||  |||||||||||    
T  25484182 agtagaagaattgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagagattttaaaccgt 25484281  T
Q  220 gcagtttcatatgcttcgggcct 242  Q
    | |||| | ||||| || |||||    
T  25484282 gtagttacttatgcatctggcct 25484304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 209 - 302
Target Start/End: Original strand, 26636858 - 26636951
Alignment:
Q  209 ttttaaaccgtgcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatgtga 302  Q
    |||||||||||||||||  ||||||||| |||||||  |||| |||||||||||| ||||||||||||||||||||||| |||| |||||||||    
T  26636858 ttttaaaccgtgcagttaaatatgcttctggccttccattagctttagaagtagtgggttccaacttgtttggaaagagtatagcagaatgtga 26636951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 209 - 302
Target Start/End: Original strand, 26742824 - 26742917
Alignment:
Q  209 ttttaaaccgtgcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatgtga 302  Q
    |||||||||||||||||  ||||||||| |||||||  |||| |||||||||||| ||||||||||||||||||||||| |||| |||||||||    
T  26742824 ttttaaaccgtgcagttaaatatgcttctggccttccattagctttagaagtagtgggttccaacttgtttggaaagagtatagcagaatgtga 26742917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 244
Target Start/End: Complemental strand, 27530460 - 27530239
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| || ||||||||| || | ||| || || ||||||||||| |||||| ||| |||||||||||  | |||||  |||||||| |   ||||    
T  27530460 tggctggaggacttgattggttcggtcctgggagtagagtcatcattactactcgaaacaaacacttactaaagattcatgggatagaaagtacacatgc 27530361  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    |||||||||||||  |  |||||||||||| ||||||||||||||||||||||| |  || || || || ||||||  | |||||||| |||||||||||    
T  27530360 agtagaagggttgaatgcgacagaagctctcgaattgttgaggtggatggctttca--aagaa-aatgttccttcaagtcatgaagacattttaaaccgt 27530264  T
Q  220 gcagtttcatatgcttcgggccttc 244  Q
    ||| || | |||||||| |||||||    
T  27530263 gcacttacttatgcttctggccttc 27530239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 299
Target Start/End: Original strand, 26849924 - 26850014
Alignment:
Q  209 ttttaaaccgtgcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatg 299  Q
    ||||||| |||||||||  ||||||||| |||||||  |||| |||||||||||| ||||||||||||||||||||||| |||||||||||    
T  26849924 ttttaaatcgtgcagttaaatatgcttctggccttccattagctttagaagtagtgggttccaacttgtttggaaagagtatagaagaatg 26850014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 28782124 - 28782214
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaag 110  Q
    |||| |||| |||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||  |||||||  ||||||||    
T  28782124 tggcaggaggacctgattggttcggccgtggaagcagggtcatcattaccactcgagacaaacacttactaagaagtcatgggatagaaag 28782214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 209 - 302
Target Start/End: Original strand, 26960337 - 26960430
Alignment:
Q  209 ttttaaaccgtgcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatgtga 302  Q
    |||||||||||||||||  ||||||||| |||||||  |||| |||||||||||| ||||||||||||||||| ||||| |||| |||||||||    
T  26960337 ttttaaaccgtgcagttaaatatgcttctggccttccattagctttagaagtagtgggttccaacttgtttggcaagagtatagcagaatgtga 26960430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 302
Target Start/End: Complemental strand, 27664184 - 27664091
Alignment:
Q  209 ttttaaaccgtgcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatgtga 302  Q
    |||||||||||||||||  ||||||||| |||||||  |||| |||| ||||||| ||||||||||||||||||||||| |||| ||| |||||    
T  27664184 ttttaaaccgtgcagttgaatatgcttctggccttccattagctttaaaagtagtgggttccaacttgtttggaaagagtatagcagattgtga 27664091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 244
Target Start/End: Original strand, 26056945 - 26057169
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| || ||||||||| || ||||||||||| ||||||||||||||||| || | || ||||||| ||  |||||  |    ||| |   ||||    
T  26056945 tggctggaggacttgattggttcggtcttggaagcagagtcatcattaccactcgtgataaacgcttactagcctatcatgtgaatacaagtacacatgc 26057044  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    |||||||||||||  |  |||||||||||||||||| |||||  | |  |||||||| ||| ||||||| ||||||  |||||||||  |||||||||||    
T  26057045 agtagaagggttgaatgagacagaagctcttgaattattgagccgaaatgcttttaaaaatgacaaagttccttcaagttatgaagatattttaaaccgt 26057144  T
Q  220 gcagtttcatatgcttcgggccttc 244  Q
    | |||| | ||||| || |||||||    
T  26057145 gtagttacttatgcatctggccttc 26057169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 244
Target Start/End: Original strand, 26076915 - 26077139
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| || ||||||||| || ||||||||||| ||||||||||||||||| || | || ||||||| ||  |||||  |    ||| |   ||||    
T  26076915 tggctggaggacttgattggttcggtcttggaagcagagtcatcattaccactcgtgataaacgcttactagcctatcatgtgaatacaagtacacatgc 26077014  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    |||||||||||||  |  |||||||||||||||||| |||||  | |  |||||||| ||| ||||||| ||||||  |||||||||  |||||||||||    
T  26077015 agtagaagggttgaatgagacagaagctcttgaattattgagccgaaatgcttttaaaaatgacaaagttccttcaagttatgaagatattttaaaccgt 26077114  T
Q  220 gcagtttcatatgcttcgggccttc 244  Q
    | |||| | ||||| || |||||||    
T  26077115 gtagttacttatgcatctggccttc 26077139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 300
Target Start/End: Original strand, 28326622 - 28326781
Alignment:
Q  141 agaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgtgcagtttcatatgcttcgggc 240  Q
    ||||||||||||||||||||||||||   |||| || |||||||||||   ||||  || ||| | | ||||| || |||||||  | |||||||| |||    
T  28326622 agaagctcttgaattgttgaggtggaatactttcaaaaataacaaagtcgattcaaattttgacggcattttatactgtgcagtaacttatgcttctggc 28326721  T
Q  241 cttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatgt 300  Q
    ||||  || | |||||||||||| ||||||||||||||||||||||  |||| |||||||    
T  28326722 cttccattggctttagaagtagtgggttccaacttgtttggaaagaatatagtagaatgt 28326781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 300
Target Start/End: Original strand, 28504258 - 28504417
Alignment:
Q  141 agaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgtgcagtttcatatgcttcgggc 240  Q
    ||||||||||||||||||||||||||   |||| || |||||||||||   ||||  || ||| | | ||||| || |||||||  | |||||||| |||    
T  28504258 agaagctcttgaattgttgaggtggaatactttcaaaaataacaaagtcgattcaaattttgacggcattttatactgtgcagtaacttatgcttctggc 28504357  T
Q  241 cttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatgt 300  Q
    ||||  || | |||||||||||| ||||||||||||||||||||||  |||| |||||||    
T  28504358 cttccattggctttagaagtagtgggttccaacttgtttggaaagaatatagtagaatgt 28504417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 25539566 - 25539788
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| || ||||||||| || | ||||||||| ||||||||||||||||| || | ||| ||| || || ||||||  ||   ||| |   |||     
T  25539566 tggctggaggacttgattggttcggtcctggaagcagagtcatcattaccactcgtgatacacatttattagcctgtcatgggattacaagtacacatgt 25539665  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    |||| ||||||||  |  ||||||||||||||||||||||||| | ||||| ||||| ||| ||||||| |||||   |||||||||  |||||||||||    
T  25539666 agtaaaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcgtttaaaaatgacaaagttccttcgagttatgaagagattttaaaccgt 25539765  T
Q  220 gcagtttcatatgcttcgggcct 242  Q
    | |||| | ||||| || |||||    
T  25539766 gtagttacttatgcatctggcct 25539788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 302
Target Start/End: Original strand, 26950955 - 26951048
Alignment:
Q  209 ttttaaaccgtgcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatgtga 302  Q
    |||||||||||||||||  ||||||| | |||||||  |||| |||||||||||| ||||| ||||||||||||||||  |||| |||||||||    
T  26950955 ttttaaaccgtgcagttaaatatgctgctggccttccattagctttagaagtagtgggttctaacttgtttggaaagactatagcagaatgtga 26951048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 244
Target Start/End: Original strand, 25511915 - 25512138
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| || ||| ||||| || | ||||||||| ||||||||||||||||| || | |||||||||| || ||||||   || ||  | |  ||||    
T  25511915 tggctggaggacttgactggttcggtcctggaagcagagtcatcattaccactcgtgataaacacttactagcctgtcatggattacaagtacac-atgc 25512013  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    |||||||||||||  |  || ||||||||||   ||||||||| | |||||||||||  || ||||||| ||||||  |||||||||  |||||||||||    
T  25512014 agtagaagggttgaatgagatagaagctcttattttgttgaggcgaatggcttttaaacatgacaaagttccttcaagttatgaagagattttaaaccgt 25512113  T
Q  220 gcagtttcatatgcttcgggccttc 244  Q
    | |||| | ||||| || |||||||    
T  25512114 gtagttacttatgcatctggccttc 25512138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 299
Target Start/End: Original strand, 28186538 - 28186696
Alignment:
Q  141 agaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgtgcagtttcatatgcttcgggc 240  Q
    |||||||||||||||||||| ||||| |||||| || |||||||||||   | ||  ||  ||   ||||||| ||| ||||||  | |||||||| |||    
T  28186538 agaagctcttgaattgttgacgtggaaggctttaaaaaataacaaagttgatacaaatttcgacagcgttttacaccatgcagtaacttatgcttctggc 28186637  T
Q  241 cttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatg 299  Q
    ||||  || | |||||||||||| ||||||||||||||||||||||  |||| ||||||    
T  28186638 cttccattggctttagaagtagtgggttccaacttgtttggaaagaatataggagaatg 28186696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 283
Target Start/End: Original strand, 25075079 - 25075153
Alignment:
Q  209 ttttaaaccgtgcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaa 283  Q
    |||||||||||||| ||  ||||||||| |||||||  |||| ||||||||| || |||||||||||||||||||    
T  25075079 ttttaaaccgtgcaattaaatatgcttctggccttccattagctttagaagttgtgggttccaacttgtttggaa 25075153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 286
Target Start/End: Complemental strand, 28296778 - 28296633
Alignment:
Q  141 agaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgtgcagtttcatatgcttcgggc 240  Q
    ||||||||||||||||||||| ||||  ||||| || |||||||||||   | ||  || ||| ||| ||||| |||  || ||  | |||||||| |||    
T  28296778 agaagctcttgaattgttgagatggaatgctttcaaaaataacaaagtcgatacaaattttgacgacattttacaccaggctgtaacttatgcttctggc 28296679  T
Q  241 cttcgcttagttttagaagtagttggttccaacttgtttggaaaga 286  Q
    ||||  || | |||||||||||| ||||||||||||||||||||||    
T  28296678 cttccattggctttagaagtagtgggttccaacttgtttggaaaga 28296633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 286
Target Start/End: Original strand, 28515295 - 28515440
Alignment:
Q  141 agaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgtgcagtttcatatgcttcgggc 240  Q
    ||||||||||||||||||||| ||||  ||||| || |||||||||||   | ||  || ||| ||| ||||| |||  || ||  | |||||||| |||    
T  28515295 agaagctcttgaattgttgagatggaatgctttcaaaaataacaaagtcgatacaaattttgacgacattttacaccaggctgtaacttatgcttctggc 28515394  T
Q  241 cttcgcttagttttagaagtagttggttccaacttgtttggaaaga 286  Q
    ||||  || | |||||||||||| ||||||||||||||||||||||    
T  28515395 cttccattggctttagaagtagtgggttccaacttgtttggaaaga 28515440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 285
Target Start/End: Original strand, 28140747 - 28140823
Alignment:
Q  209 ttttaaaccgtgcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaag 285  Q
    ||||||||||||||||| | ||||| || |||||||  || | |||||||||||||||||| | |||||||||||||    
T  28140747 ttttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagttggttctagcttgtttggaaag 28140823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 111
Target Start/End: Original strand, 27215475 - 27215566
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaaga 111  Q
    ||||||||| || ||||||||||||   |||||| || ||||||||||| |||||| ||||||| |||||||||  |||||  |||||||||    
T  27215475 tggctggaggacttgattggtttggtggtggaagtagagtcatcattacgactcgaaacagacagttactaacctatcatgggatagaaaga 27215566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 28240589 - 28240642
Alignment:
Q  229 tatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttgga 282  Q
    |||||||| ||||| |  |||| |||||||||||||||||||||||||||||||    
T  28240589 tatgcttctggcctaccattagctttagaagtagttggttccaacttgtttgga 28240642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 26812759 - 26812827
Alignment:
Q  228 atatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaaga 296  Q
    |||| |||| |||||||  |||| | |||||||||| ||||||||||||||||||||||| || |||||    
T  26812759 atatacttctggccttccattagctatagaagtagtgggttccaacttgtttggaaagagtattgaaga 26812827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 286
Target Start/End: Original strand, 28182373 - 28182407
Alignment:
Q  252 tttagaagtagttggttccaacttgtttggaaaga 286  Q
    |||||||||||| ||||||||||||||||||||||    
T  28182373 tttagaagtagtgggttccaacttgtttggaaaga 28182407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 302
Target Start/End: Original strand, 26978612 - 26978685
Alignment:
Q  229 tatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatgtga 302  Q
    |||||||| || ||||  |||| |||||||||||| ||||| | ||||||||||||||| |||| ||| |||||    
T  26978612 tatgcttctggtcttccattagctttagaagtagtgggttcaagcttgtttggaaagagtatagcagagtgtga 26978685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 81
Target Start/End: Complemental strand, 27664335 - 27664303
Alignment:
Q  49 ggaagcagggtcatcattaccactcgagacaga 81  Q
    |||||||| ||||||||||||||||||||||||    
T  27664335 ggaagcagagtcatcattaccactcgagacaga 27664303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 180; Significance: 3e-97; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 20 - 299
Target Start/End: Complemental strand, 3871 - 3592
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||  |||||||  |||||||| | | |||     
T  3871 tggcaggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacaaacacttgctaagaagtcatgggatagaaagtacgcatga 3772  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    |||  ||||| ||| | |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||| |||    
T  3771 agtgaaagggctgtatgggacagaagctcttgagttgttgagatggatggcttttaagaataacaaagtaccttcaagttatgaagacgttttaaatcgt 3672  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatg 299  Q
    ||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  3671 gcagtttcatatgcttcgggccttcccttagttttagaaatagtgggttccaacttgtttggaaagacgatagaagaatg 3592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 20 - 299
Target Start/End: Complemental strand, 12834 - 12555
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    |||| |||| |||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||  |||||||  ||| |||| | | |||     
T  12834 tggcaggaggacctgattggttcggccgtggaagcagggtcatcattaccactcgagacaaacacttactaagaagtcatgggataaaaagtacgcatga 12735  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    |||  ||||| ||| | | |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||| |||    
T  12734 agtgaaagggctgtatggaacagaagctcttgagttgttgagatggatggcttttaagaataacaaagtaccttcaagttatgaagacgttttaaatcgt 12635  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatg 299  Q
    ||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  12634 gcagtttcatatgcttcgggccttcccttagttttagaaatagtgggttccaacttgtttggaaagacgatagaagaatg 12555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 20 - 299
Target Start/End: Complemental strand, 29272997 - 29272718
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| || ||||||||| |||| ||||||||  ||||||||||| |||||||||| |||||| |||||  ||||||  ||| |||| | | |||     
T  29272997 tggctggaggacatgattggttcggccgtggaagcaaagtcatcattactactcgagacaaacacttgctaacttgtcatgggataaaaagtatgcatga 29272898  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    |||||||||| ||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  29272897 agtagaagggctgtatgggacaaaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcaatttatgaagacgttttaaatcgt 29272798  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatg 299  Q
    ||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  29272797 gcagtttcatatgcttcgggccttcccttagttttagaaatagtgggttccaacttgtttggaaagaggatagaagaatg 29272718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 20 - 299
Target Start/End: Original strand, 8510 - 8789
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    |||| |||| |||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||  |||||||  ||| |||| | | |||     
T  8510 tggcaggaggacctgattggttcggccgtggaagcagggtcatcattaccactcgagacaaacacttactaagaagtcatgggataaaaagtacgcatga 8609  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    |||  ||||| ||| | | |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||| |||    
T  8610 agtgaaagggctgtatggaacagaagctcttgagttgttgagatggatggcttttaagaataacaaagtaccttcaagttatgaagacgttttaaatcgt 8709  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatg 299  Q
    ||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  8710 gcagtttcatatgcttcgggccttcccttagttttagaaatagtgggttccaacttgtttggaaagacgatagaagaatg 8789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 128; Significance: 4e-66; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 20 - 299
Target Start/End: Complemental strand, 2698 - 2419
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| |||||||||||| |||| ||||||||  |||||||||||||||||||||| ||||||||||||| ||||||  ||| |||| | | |||     
T  2698 tggctggaggacctgattggttcggccgtggaagcaaagtcatcattaccactcgagacaaacacttactaacctgtcatgggataaaaagtatgcatga 2599  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||| | | |||| || ||||||| ||| |||||  |||||||||||    
T  2598 agtagaagggttgtatgggacagaagctcttgaattgttgaggtggatggcttttaaaagtgacaatgttccttcaggttacgaagagattttaaaccgt 2499  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatg 299  Q
    |||||| |||||||||| |||||||  |||||| ||||| |||| ||||| ||||| | ||||||||  ||||| |||||    
T  2498 gcagttgcatatgcttctggccttccgttagttatagaaatagtgggttctaacttatctggaaagaacatagaggaatg 2419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 4e-66; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 20 - 299
Target Start/End: Complemental strand, 28126834 - 28126555
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| || ||||||||| || | ||||||||  |||||||||||||||||||| | ||||||||||||| ||||||  |||||||| | | ||||    
T  28126834 tggctggaggacttgattggttcggtcgtggaagcaaagtcatcattaccactcgagagaaacacttactaacctgtcatgggatagaaagtacgcatgc 28126735  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
     ||| ||||||||| |   ||| |||| |||||||||||||||||||||||||||||  |||||||||| ||||||  |||||| || |||||||||||     
T  28126734 ggtaaaagggttgtatgtaacaaaagcacttgaattgttgaggtggatggcttttaaacataacaaagttccttcaagttatgatgatgttttaaaccgg 28126635  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatg 299  Q
    ||||||||||||||||| ||||||| ||||||| ||||| |||| ||||||||||| ||||||||||| |||||||||||    
T  28126634 gcagtttcatatgcttcaggccttcccttagttatagaaatagtgggttccaacttatttggaaagagcatagaagaatg 28126555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 20 - 257
Target Start/End: Complemental strand, 28163535 - 28163298
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| ||  |||||||| || | |||||||||||||||||||||||||||||||| ||||||||||||| ||||||  |||||||| | | || |    
T  28163535 tggctggaggactcgattggttcggtcgtggaagcagggtcatcattaccactcgagacaaacacttactaacctgtcatgggatagaaagtatgcattc 28163436  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
     ||||||||||||| | |||| ||||| ||||||||||||| ||||||||||||||| ||||||||||| ||||||  ||||||||| |||||||| |||    
T  28163435 ggtagaagggttgtatgggacggaagcgcttgaattgttgacgtggatggcttttaaaaataacaaagttccttcaagttatgaagatgttttaaatcgt 28163336  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttaga 257  Q
    ||||||||||||||||| ||||||| ||||||| ||||    
T  28163335 gcagtttcatatgcttcaggccttcccttagttataga 28163298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 20 - 299
Target Start/End: Complemental strand, 267499 - 267220
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| || ||||||||| |||  ||||||||| ||| || |||||||||||||||  || ||||||||| ||||||  |||||||| | | |||     
T  267499 tggctggaggacttgattggttcggctatggaagcagagtcgtcgttaccactcgagacaagcaattactaacctgtcatgggatagaaagtacgcatga 267400  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    |||||||||||||| | |||| |||||||||||||||||||| |||||||||||||| ||| |   ||| || ||| ||||  | ||  ||||||  |||    
T  267399 agtagaagggttgtatgggaccgaagctcttgaattgttgagttggatggcttttaaaaatgatccagttccatcaatttacaatgagattttaattcgt 267300  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatg 299  Q
    |||||| | |||||||| |||||||  |||||||||||| | || ||||| ||||||||||||||||| |||||||||||    
T  267299 gcagttgcttatgcttctggccttccgttagttttagaaattgtgggttctaacttgtttggaaagagcatagaagaatg 267220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 285
Target Start/End: Original strand, 26137100 - 26137176
Alignment:
Q  209 ttttaaaccgtgcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaag 285  Q
    |||||||| ||||||||  ||||||||| |||||||  |||| |||||||||||| ||||||| |||||||||||||    
T  26137100 ttttaaacagtgcagttaaatatgcttctggccttccgttagctttagaagtagtgggttccagcttgtttggaaag 26137176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 26137033 - 26137067
Alignment:
Q  142 gaagctcttgaattgttgaggtggatggcttttaa 176  Q
    ||||||||||||||||| |||||||||||||||||    
T  26137033 gaagctcttgaattgtttaggtggatggcttttaa 26137067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 7e-49; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 20 - 302
Target Start/End: Complemental strand, 18723240 - 18722958
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| |||||||||||| |||  ||||||||| || ||||||||||||||  ||| ||| |||||||||| ||||||  ||||||  | | |||     
T  18723240 tggctggaggacctgattggttcggctctggaagcagagttatcattaccactcgtaacaaacaattactaaccaatcatgaggtagaaattatgcatga 18723141  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    |||| ||||| ||| || |  | | |||||||||||||||||||||||||||||||| | | ||||||| ||||||  |||||||||  ||||||||||     
T  18723140 agtaaaagggatgtctacggaaaatgctcttgaattgttgaggtggatggcttttaaaagttacaaagttccttcaagttatgaagagattttaaaccga 18723041  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatgtga 302  Q
    |||||| | |||||||| |||||||  |||| | |||||||||| ||||||||||||||||||||||| || | |||||||||    
T  18723040 gcagttgcgtatgcttctggccttccattagctatagaagtagtgggttccaacttgtttggaaagagtattgcagaatgtga 18722958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 20 - 299
Target Start/End: Original strand, 18074784 - 18075063
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| |  ||||||||| || | ||||||| | |||||||| ||||| ||||| | |||||||||| || ||||||| ||||||| ||  |||||    
T  18074784 tggctggaggagttgattggttcggtcctggaagccgagtcatcatcaccacccgagataaacacttactagcctgtcatgagatagaaaaaacatatgc 18074883  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    |||| ||||||||  |  ||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||  ||||||| |  |||| || |||    
T  18074884 agtaaaagggttgaatgtgacagaagctcttgaattgttgaggtggatggcttttaaaaatgacaaagttccttcaagttatgaaaagattttgaatcgt 18074983  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatg 299  Q
    | |||| | |||||||| |||||||   ||||| ||||| |||| ||||| ||||||||||||||||  |||||||||||    
T  18074984 gtagttgcttatgcttctggccttccggtagttatagaaatagtgggttctaacttgtttggaaagaacatagaagaatg 18075063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 20 - 302
Target Start/End: Complemental strand, 18654632 - 18654350
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| || ||||||||| ||   ||||||||| || ||||||||||||||  ||| ||||||||||| || |||||| |||||||  | | |||     
T  18654632 tggctggaggacgtgattggttcggttgtggaagcagagttatcattaccactcgtaacaaacacttactaagcaatcatgagatagaaattatgcatga 18654533  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    |||| ||||| ||| || |  | | |||||||||||||||||||||||||||||||| | | ||||||| ||||||  |||||||||  |||||||||||    
T  18654532 agtaaaagggatgtctacggaaaatgctcttgaattgttgaggtggatggcttttaaaatttacaaagttccttcaagttatgaagagattttaaaccgt 18654433  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatgtga 302  Q
    |||||| | |||||||| |||||||  |||| | ||||||| || ||||||||||||||||||||||| || | |||||||||    
T  18654432 gcagttgcgtatgcttctggccttccattagctatagaagtcgtgggttccaacttgtttggaaagagtattgcagaatgtga 18654350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 20 - 287
Target Start/End: Complemental strand, 18698555 - 18698288
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| || ||||||||| |||  ||||||||| || ||||||||||||||  ||| |||||||||||||| |||||| |||||||  |   |||     
T  18698555 tggctggaggacgtgattggttcggctgtggaagcagagttatcattaccactcgtaacaaacacttactaaccaatcatgagatagaaattatccatga 18698456  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    |||| ||||| ||| || |  | | |||||||||||||||||||||||||||||||| ||| ||||||| ||||||  |||||||||  |||| |||| |    
T  18698455 agtaaaagggatgtctacggaaaatgctcttgaattgttgaggtggatggcttttaaaaattacaaagttccttcaagttatgaagagatttttaaccat 18698356  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagag 287  Q
    ||||||   |||||||| |||||||  |||| | |||||||||| |||||||||||||||||||||||    
T  18698355 gcagttgtgtatgcttctggccttccattagctctagaagtagtgggttccaacttgtttggaaagag 18698288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 20 - 287
Target Start/End: Complemental strand, 18730659 - 18730392
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| || ||||||||| |||  ||||||||  || ||||||||||||||  ||| |||||||||||||| |||||| |||||||  |   |||     
T  18730659 tggctggaggacgtgattggttcggctgtggaagcatagttatcattaccactcgtaacaaacacttactaaccaatcatgagatagaaattatccatga 18730560  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    |||| ||||| ||| || |  | | |||||||||||||||||||||||||||||||| ||| ||||||| ||||||  |||||||||  |||| |||| |    
T  18730559 agtaaaagggatgtctacggaaaatgctcttgaattgttgaggtggatggcttttaaaaattacaaagttccttcaagttatgaagagatttttaaccat 18730460  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagag 287  Q
    ||||||   |||||||| |||||||  |||| | |||||||||| |||||||||||||||||||||||    
T  18730459 gcagttgtgtatgcttctggccttccattagctctagaagtagtgggttccaacttgtttggaaagag 18730392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 48 - 286
Target Start/End: Complemental strand, 18678687 - 18678449
Alignment:
Q  48 tggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgcagtagaagggttgtgtaggacagaagct 147  Q
    ||||||||| || ||||||||||||||  ||| ||||||||||| || |||||| |||||||  | | ||| |||| ||||| ||| ||||  | | |||    
T  18678687 tggaagcagagttatcattaccactcgtaacaaacacttactaagcaatcatgagatagaaattatgcatgaagtaaaagggatgtctagggaaaatgct 18678588  T
Q  148 cttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgtgcagtttcatatgcttcgggccttcgct 247  Q
    ||||||||||||||||||||||||||||| | | ||||||| ||||||  |||||||||  ||||||| |||||||||   |||||||| |||||||  |    
T  18678587 cttgaattgttgaggtggatggcttttaaaagttacaaagttccttcaagttatgaagagattttaaaacgtgcagttgtgtatgcttctggccttccat 18678488  T
Q  248 tagttttagaagtagttggttccaacttgtttggaaaga 286  Q
    ||| | |||||||||| ||||||||||||||||||||||    
T  18678487 tagctatagaagtagtgggttccaacttgtttggaaaga 18678449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 145 - 287
Target Start/End: Complemental strand, 18688656 - 18688514
Alignment:
Q  145 gctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgtgcagtttcatatgcttcgggccttc 244  Q
    |||||||||||||||||||||||||||||||| | | | ||||| ||||||  |||||||||  ||||||||||||||||    |||||||| |||||||    
T  18688656 gctcttgaattgttgaggtggatggcttttaaaagttataaagttccttcaagttatgaagagattttaaaccgtgcagtcgtgtatgcttctggccttc 18688557  T
Q  245 gcttagttttagaagtagttggttccaacttgtttggaaagag 287  Q
      |||| | |||||||||| |||||||||||||||||||||||    
T  18688556 cattagctatagaagtagtgggttccaacttgtttggaaagag 18688514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 5090109 - 5090038
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaa 91  Q
    |||| |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||| |||||| ||||    
T  5090109 tggccggagaacctgattggtttggtcttggcagcagagtcatcattaccactcgagacaaacacttgctaa 5090038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 20 - 299
Target Start/End: Original strand, 60592 - 60871
Alignment:
Q  20 tggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatgc 119  Q
    ||||||||| |  ||||||||| || | ||||||| | |||||||| ||||| ||||| | |||||||||| || ||||||| ||||||| ||  |||||    
T  60592 tggctggaggagttgattggttcggtcctggaagccgagtcatcatcaccacccgagataaacacttactagcctgtcatgagatagaaaaaacatatgc 60691  T
Q  120 agtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgt 219  Q
    |||| ||||||||  |  ||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||  ||||||| |  |||| || |||    
T  60692 agtaaaagggttgaatgtgacagaagctcttgaattgttgaggtggatggcttttaaaaatgacaaagttccttcaagttatgaaaagattttgaatcgt 60791  T
Q  220 gcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatg 299  Q
    | |||| | |||||||| |||||||   ||||| ||||| |||| ||||| ||||||||||||||||  |||||||||||    
T  60792 gtagttgcttatgcttctggccttccggtagttatagaaatagtgggttctaacttgtttggaaagaacatagaagaatg 60871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1870 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold1870
Description:

Target: scaffold1870; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 229 - 299
Target Start/End: Original strand, 1 - 71
Alignment:
Q  229 tatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatg 299  Q
    |||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  1 tatgcttcgggccttcccttagttttagaaatagtgggttccaacttgtttggaaagacgatagaagaatg 71  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 299
Target Start/End: Original strand, 16691889 - 16692169
Alignment:
Q  19 atggctggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagtatg 118  Q
    |||| |||||| || ||||||||||| | |||||| || |||||||||||||||||||||| |||||||||||| ||||||| ||| || ||||  ||||    
T  16691889 atggttggagagcccgattggtttggtcctggaagtagagtcatcattaccactcgagacaaacacttactaacaagtcatggtattgatagaatatatg 16691988  T
Q  119 cagtagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccg 218  Q
     ||| || || ||   | |   ||||||||| ||| | |||||||||| | ||||||| |||||||||||   ||||  ||  ||  || |||||||       
T  16691989 aagtggatggtttaaatggagaagaagctctagaactattgaggtggaagacttttaaaaataacaaagtcgattcaagtttcgagtacattttaaaata 16692088  T
Q  219 tgcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatg 299  Q
    ||  ||  | |||||||| |||||||  |||| |||||||||||| || || ||||||||||||||||  |||||||||||    
T  16692089 tgttgtaacttatgcttctggccttccattagctttagaagtagtaggatctaacttgtttggaaagaatatagaagaatg 16692169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 141 - 299
Target Start/End: Complemental strand, 57332 - 57174
Alignment:
Q  141 agaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaaccgtgcagtttcatatgcttcgggc 240  Q
    ||||||||||||||||||||||||||  ||||| || |||||||||||   | ||  ||  ||  |||||||| ||| ||||||  | |||||||| |||    
T  57332 agaagctcttgaattgttgaggtggaatgctttcaaaaataacaaagtcaatccaaatttcgacaacgttttacaccttgcagtaacttatgcttcaggc 57233  T
Q  241 cttcgcttagttttagaagtagttggttccaacttgtttggaaagaggatagaagaatg 299  Q
    ||||  || |  ||||||||||| ||||| ||||||||||||||||  |||| ||||||    
T  57232 cttccattggccttagaagtagtgggttcgaacttgtttggaaagaatataggagaatg 57174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 285
Target Start/End: Complemental strand, 17992185 - 17992109
Alignment:
Q  209 ttttaaaccgtgcagtttcatatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttggaaag 285  Q
    |||||||||||| ||||  ||||||| | ||||| |  |||| |||||||||||| |||||||||||||||||||||    
T  17992185 ttttaaaccgtgtagttaaatatgctgctggcctcccattagctttagaagtagtgggttccaacttgtttggaaag 17992109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 40751 - 40804
Alignment:
Q  229 tatgcttcgggccttcgcttagttttagaagtagttggttccaacttgtttgga 282  Q
    |||||||| ||||| |  |||| |||||||||||||||||||||||||||||||    
T  40751 tatgcttctggcctaccattagctttagaagtagttggttccaacttgtttgga 40804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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