View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16569_low_77 (Length: 286)
Name: NF16569_low_77
Description: NF16569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16569_low_77 |
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Alignment Details
Target: chr2 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 1 - 272
Target Start/End: Complemental strand, 4676746 - 4676475
Alignment:
| Q |
1 |
ttaaatattctgtgacaaaatttatttatgcgacttccgaaatcaatgttccggaagcgtttattataaagtctttatctagagaagcttggagtaagga |
100 |
Q |
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| T |
4676746 |
ttaaatattctgtgacaaaatttatttatgcgacttccgaaatcaatgttccggaagcgtttattataaagtctttatctagagaagcttggagtaagga |
4676647 |
T |
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| Q |
101 |
atcaaattggattggatttgttgctgtggctaatgatgaagggaaagatgtgttggggagaagggatattgtgattgcttggagaggaacgattcaaaca |
200 |
Q |
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| T |
4676646 |
atcaaattggattggatttgttgctgtggctaatgatgaagggaaagatgtgttggggagaagggatattgtgattgcttggagaggaacgattcaaaca |
4676547 |
T |
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| Q |
201 |
ttggaatgggttaatgatcttcagtttcttttggtttctgctcctaaagtatttggtaatagcaataatatt |
272 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4676546 |
ttggaatgggttaatgatcttcagtttcttttggtttctgctcctaaagtatttggtaatagcaataatatt |
4676475 |
T |
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