View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16569_low_87 (Length: 263)
Name: NF16569_low_87
Description: NF16569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16569_low_87 |
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Alignment Details
Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 22 - 249
Target Start/End: Complemental strand, 45199124 - 45198897
Alignment:
| Q |
22 |
aaggtgagtgaatcagatagctcctccactctttctcctgatggaggactgccaggactctgctgcctattagaagaaactgaatgcaaccaatttgaaa |
121 |
Q |
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| T |
45199124 |
aaggtgagtgaatcagatagctcctccactctttctcctgatggaggactgccaggactctgcttcctattagaagaaactgaatgcaaccaatttgaaa |
45199025 |
T |
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| Q |
122 |
gcttgtttctggtagtaggagatgaagatgaaccatcattggacttgttactcctttcagcttgtgcatcttctgattgattattagacattatatgaag |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45199024 |
gcttgtttctggtagtaggagatgaagatgaaccatcattggacttgttactcctttcagcttgtgcatcttctgattgattattagacattatatgaag |
45198925 |
T |
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| Q |
222 |
cttcttaagaatgttcttcataactttt |
249 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
45198924 |
cttcttaagaatgttcttcataactttt |
45198897 |
T |
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