View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16569_low_91 (Length: 257)
Name: NF16569_low_91
Description: NF16569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16569_low_91 |
 | |
|
| [»] chr3 (3 HSPs) |
| |
|
| [»] chr2 (3 HSPs) |
| |
|
| [»] chr1 (1 HSPs) |
| |
|
| [»] scaffold0065 (1 HSPs) |
| | |
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| [»] scaffold0671 (1 HSPs) |
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|
| [»] scaffold0359 (1 HSPs) |
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|
| [»] scaffold0003 (1 HSPs) |
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| [»] chr7 (3 HSPs) |
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| [»] chr6 (2 HSPs) |
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| [»] chr8 (3 HSPs) |
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| [»] scaffold0002 (1 HSPs) |
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| [»] chr5 (1 HSPs) |
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| [»] chr4 (2 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 101; Significance: 4e-50; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 141 - 257
Target Start/End: Original strand, 33757704 - 33757820
Alignment:
| Q |
141 |
ggtgatgaacactattttgtgaaaattgttcatattttacttttaattatgaattgataaaagttgcttgctgaaagattatataaaggcacaaaacgca |
240 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
33757704 |
ggtgatgaacactattttgtgaaaattgttcatatttgacttttaattatgaattgataaaagttgcttgctgaaagattaattaaaggcacaaaacaca |
33757803 |
T |
|
| Q |
241 |
agaaatgaactaaaaat |
257 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
33757804 |
agaaatgaactaaaaat |
33757820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 142 - 257
Target Start/End: Original strand, 13179622 - 13179737
Alignment:
| Q |
142 |
gtgatgaacactattttgtgaaaattgttcatattttacttttaattatgaattgataaaagttgcttgctgaaagattatataaaggcacaaaacgcaa |
241 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||| |||| ||||||||| ||| |
|
|
| T |
13179622 |
gtgatgaacactattttgtgaaaattgttcatatttgacttttaatcatgaattgataaaagttgcttgctgaaagtttaattaaaagcacaaaacacaa |
13179721 |
T |
|
| Q |
242 |
gaaatgaactaaaaat |
257 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
13179722 |
gaaatgaactaaaaat |
13179737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 143 - 257
Target Start/End: Original strand, 13184281 - 13184395
Alignment:
| Q |
143 |
tgatgaacactattttgtgaaaattgttcatattttacttttaattatgaattgataaaagttgcttgctgaaagattatataaaggcacaaaacgcaag |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||| |||| ||||||||| |||| |
|
|
| T |
13184281 |
tgatgaacactattttgtgaaaattgttcatatttgacttttaatcatgaattgataaaagttgcttgctgaaagtttaattaaaagcacaaaacacaag |
13184380 |
T |
|
| Q |
243 |
aaatgaactaaaaat |
257 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
13184381 |
aaatgaactaaaaat |
13184395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 99; Significance: 6e-49; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 143 - 257
Target Start/End: Original strand, 21465005 - 21465119
Alignment:
| Q |
143 |
tgatgaacactattttgtgaaaattgttcatattttacttttaattatgaattgataaaagttgcttgctgaaagattatataaaggcacaaaacgcaag |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
21465005 |
tgatgaacactattttgtgaaaattgttcatatttgacttttaattatgaattgataaaagttgcttgctgaaagattaattaaaggcacaaaacacaag |
21465104 |
T |
|
| Q |
243 |
aaatgaactaaaaat |
257 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
21465105 |
aaatgaactaaaaat |
21465119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 143 - 257
Target Start/End: Original strand, 44794490 - 44794604
Alignment:
| Q |
143 |
tgatgaacactattttgtgaaaattgttcatattttacttttaattatgaattgataaaagttgcttgctgaaagattatataaaggcacaaaacgcaag |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
44794490 |
tgatgaacactattttgtgaaaattgttcatatttgacttttaatcatgaattgataaaagttgcttgctgaaagattaattaaaggcacaaaacacaag |
44794589 |
T |
|
| Q |
243 |
aaatgaactaaaaat |
257 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
44794590 |
aaatgaactaaaaat |
44794604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 143 - 257
Target Start/End: Complemental strand, 44795085 - 44794971
Alignment:
| Q |
143 |
tgatgaacactattttgtgaaaattgttcatattttacttttaattatgaattgataaaagttgcttgctgaaagattatataaaggcacaaaacgcaag |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
44795085 |
tgatgaacactattttgtgaaaattgttcatatttgacttttaatcatgaattgataaaagttgcttgctgaaagattaattaaaggcacaaaacacaag |
44794986 |
T |
|
| Q |
243 |
aaatgaactaaaaat |
257 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
44794985 |
aaatgaactaaaaat |
44794971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 143 - 257
Target Start/End: Complemental strand, 37260746 - 37260632
Alignment:
| Q |
143 |
tgatgaacactattttgtgaaaattgttcatattttacttttaattatgaattgataaaagttgcttgctgaaagattatataaaggcacaaaacgcaag |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
37260746 |
tgatgaacactattttgtgaaaattgttcatatttgacttttaattatgaattgataaaagttgcttgctgaaagattaattaaaggcacaaaacacaag |
37260647 |
T |
|
| Q |
243 |
aaatgaactaaaaat |
257 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
37260646 |
aaatgaactaaaaat |
37260632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0065 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0065
Description:
Target: scaffold0065; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 143 - 255
Target Start/End: Original strand, 33516 - 33628
Alignment:
| Q |
143 |
tgatgaacactattttgtgaaaattgttcatattttacttttaattatgaattgataaaagttgcttgctgaaagattatataaaggcacaaaacgcaag |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
33516 |
tgatgaacactattttgtgaaaattgttcatatttgacttttaattatgaattgataaaagttgcttgctgaaagattaattaaaggcacaaaacacaag |
33615 |
T |
|
| Q |
243 |
aaatgaactaaaa |
255 |
Q |
| |
|
||||||||||||| |
|
|
| T |
33616 |
aaatgaactaaaa |
33628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0671 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0671
Description:
Target: scaffold0671; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 142 - 257
Target Start/End: Complemental strand, 2464 - 2349
Alignment:
| Q |
142 |
gtgatgaacactattttgtgaaaattgttcatattttacttttaattatgaattgataaaagttgcttgctgaaagattatataaaggcacaaaacgcaa |
241 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
2464 |
gtgatgaacactattttgagaaaattgttcatatttgacttttaattatgaattgataaaagttgcttgctgaaagattaattaaaggcacaaaacacaa |
2365 |
T |
|
| Q |
242 |
gaaatgaactaaaaat |
257 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
2364 |
gaaatgaactaaaaat |
2349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0359 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0359
Description:
Target: scaffold0359; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 143 - 257
Target Start/End: Original strand, 8503 - 8617
Alignment:
| Q |
143 |
tgatgaacactattttgtgaaaattgttcatattttacttttaattatgaattgataaaagttgcttgctgaaagattatataaaggcacaaaacgcaag |
242 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
8503 |
tgatgaacactatttcgtgaaaattgttcatatttgacttttaattatgaattgataaaagttgcttgctgaaagattaattaaaggcacaaaacacaag |
8602 |
T |
|
| Q |
243 |
aaatgaactaaaaat |
257 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
8603 |
aaatgaactaaaaat |
8617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 143 - 257
Target Start/End: Complemental strand, 289301 - 289187
Alignment:
| Q |
143 |
tgatgaacactattttgtgaaaattgttcatattttacttttaattatgaattgataaaagttgcttgctgaaagattatataaaggcacaaaacgcaag |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||| |
|
|
| T |
289301 |
tgatgaacactattttgtgaaaattgttcatatttgacttttaattatgaattgataaaagttgcttgctgaaagattaattaaaggctcaaaacacaag |
289202 |
T |
|
| Q |
243 |
aaatgaactaaaaat |
257 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
289201 |
aaatgaactaaaaat |
289187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 95; Significance: 1e-46; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 143 - 257
Target Start/End: Complemental strand, 16157365 - 16157251
Alignment:
| Q |
143 |
tgatgaacactattttgtgaaaattgttcatattttacttttaattatgaattgataaaagttgcttgctgaaagattatataaaggcacaaaacgcaag |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | || |
|
|
| T |
16157365 |
tgatgaacactattttgtgaaaattgttcatatttgacttttaattatgaattgataaaagttgcttgctgaaagattaattaaaggcacaaaacactag |
16157266 |
T |
|
| Q |
243 |
aaatgaactaaaaat |
257 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
16157265 |
aaatgaactaaaaat |
16157251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 143 - 257
Target Start/End: Original strand, 21368381 - 21368495
Alignment:
| Q |
143 |
tgatgaacactattttgtgaaaattgttcatattttacttttaattatgaattgataaaagttgcttgctgaaagattatataaaggcacaaaacgcaag |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || | |
|
|
| T |
21368381 |
tgatgaacactattttgtgaaaattgttcatatttgacttttaattatgaattgataaaagttgtttgctgaaagattaattaaaggcacaaaacacagg |
21368480 |
T |
|
| Q |
243 |
aaatgaactaaaaat |
257 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
21368481 |
aaatgaactaaaaat |
21368495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 143 - 247
Target Start/End: Original strand, 22707434 - 22707536
Alignment:
| Q |
143 |
tgatgaacactattttgtgaaaattgttcatattttacttttaattatgaattgataaaagttgcttgctgaaagattatataaaggcacaaaacgcaag |
242 |
Q |
| |
|
||||||| ||||||| || ||||||||| |||||| |||||||||||||||||||||||||||||||| | ||||||||| || ||||||||||| |||| |
|
|
| T |
22707434 |
tgatgaatactattt-gtaaaaattgtttatatttgacttttaattatgaattgataaaagttgcttgattaaagattat-tataggcacaaaacacaag |
22707531 |
T |
|
| Q |
243 |
aaatg |
247 |
Q |
| |
|
||||| |
|
|
| T |
22707532 |
aaatg |
22707536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 143 - 257
Target Start/End: Original strand, 21299132 - 21299246
Alignment:
| Q |
143 |
tgatgaacactattttgtgaaaattgttcatattttacttttaattatgaattgataaaagttgcttgctgaaagattatataaaggcacaaaacgcaag |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
21299132 |
tgatgaacactattttgtgaaaattgttcatatttgacttttaatcatgaattgataaaagttgcttgctgaaagattaattaaaggcacaaaacacaag |
21299231 |
T |
|
| Q |
243 |
aaatgaactaaaaat |
257 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
21299232 |
aaatgaactaaaaat |
21299246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 9344424 - 9344343
Alignment:
| Q |
156 |
tttgtgaaaattgttcatattttacttttaattatgaattgataaaagttgcttgctgaaagattatataaaggcacaaaac |
237 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| || ||||||||||| |
|
|
| T |
9344424 |
tttgtgaaaattgttcatatttgacttttaattatgaattgataaaagttgcttgctgaaatattaattataggcacaaaac |
9344343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 92; Significance: 9e-45; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 142 - 257
Target Start/End: Original strand, 16417291 - 16417406
Alignment:
| Q |
142 |
gtgatgaacactattttgtgaaaattgttcatattttacttttaattatgaattgataaaagttgcttgctgaaagattatataaaggcacaaaacgcaa |
241 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||| |
|
|
| T |
16417291 |
gtgatgaacactattttatgaaaattgttcatatttgacttttaattatgaattgataaaagttgcttgctgaaagattaattaaaggcgcaaaacacaa |
16417390 |
T |
|
| Q |
242 |
gaaatgaactaaaaat |
257 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
16417391 |
gaaatgaactaaaaat |
16417406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 143 - 257
Target Start/End: Original strand, 18774040 - 18774154
Alignment:
| Q |
143 |
tgatgaacactattttgtgaaaattgttcatattttacttttaattatgaattgataaaagttgcttgctgaaagattatataaaggcacaaaacgcaag |
242 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||| |||| |
|
|
| T |
18774040 |
tgatgaacactattttgtgaaaattgatcatatttgacttttaattatgaattgataaaaattgcttgcagaaagattaattaaaggcacaaaacacaag |
18774139 |
T |
|
| Q |
243 |
aaatgaactaaaaat |
257 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
18774140 |
aaatgaactaaaaat |
18774154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 142 - 255
Target Start/End: Original strand, 17459592 - 17459705
Alignment:
| Q |
142 |
gtgatgaacactattttgtgaaaattgttcatattttacttttaattatgaattgataaaagttgcttgctgaaagattatataaaggcacaaaacgcaa |
241 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||| || |
|
|
| T |
17459592 |
gtgatgaacactattttgtgaaaattgttcatatttgacttttaattatgaattgataaaagttgcttgctgaaagattaattaaagtctcaaaacataa |
17459691 |
T |
|
| Q |
242 |
gaaatgaactaaaa |
255 |
Q |
| |
|
||||||| |||||| |
|
|
| T |
17459692 |
gaaatgatctaaaa |
17459705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 142 - 257
Target Start/End: Complemental strand, 127366 - 127251
Alignment:
| Q |
142 |
gtgatgaacactattttgtgaaaattgttcatattttacttttaattatgaattgataaaagttgcttgctgaaagattatataaaggcacaaaacgcaa |
241 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||| |||| ||||||||| ||| |
|
|
| T |
127366 |
gtgatgaacactattttgtgaaaattgttcatatttgacttttaatcatgaattgataaaagttgcttgctgaaagtttaattaaaagcacaaaacacaa |
127267 |
T |
|
| Q |
242 |
gaaatgaactaaaaat |
257 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
127266 |
gaaatgaactaaaaat |
127251 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 143 - 257
Target Start/End: Original strand, 22821033 - 22821147
Alignment:
| Q |
143 |
tgatgaacactattttgtgaaaattgttcatattttacttttaattatgaattgataaaagttgcttgctgaaagattatataaaggcacaaaacgcaag |
242 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||| |
|
|
| T |
22821033 |
tgataaacactattttgtgaaaattgttcatatttgacttataattatgaattgataaaagttgcttgctgaaagattaattaaaggtacaaaacacaag |
22821132 |
T |
|
| Q |
243 |
aaatgaactaaaaat |
257 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
22821133 |
aaatgaactaaaaat |
22821147 |
T |
|
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Target: chr4 (Bit Score: 87; Significance: 8e-42; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 147 - 257
Target Start/End: Complemental strand, 11475977 - 11475867
Alignment:
| Q |
147 |
gaacactattttgtgaaaattgttcatattttacttttaattatgaattgataaaagttgcttgctgaaagattatataaaggcacaaaacgcaagaaat |
246 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
11475977 |
gaacactattttgtgaaaattgttcatatttgacttttaattatgaattgataaaagttgattgctgaaagattaattaaaggcacaaaacttaagaaat |
11475878 |
T |
|
| Q |
247 |
gaactaaaaat |
257 |
Q |
| |
|
||||||||||| |
|
|
| T |
11475877 |
gaactaaaaat |
11475867 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 143 - 246
Target Start/End: Complemental strand, 34456079 - 34455975
Alignment:
| Q |
143 |
tgatgaacactattttgtgaaaattgttcatattttacttttaattatgaattgat-aaaagttgcttgctgaaagattatataaaggcacaaaacgcaa |
241 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||| ||| ||||||||||| || |
|
|
| T |
34456079 |
tgatgaacactgttttgtgaaaattgttcatatttgacttttaattatgaattggtaaaaagttgcttgctgaaagattaaatataggcacaaaacataa |
34455980 |
T |
|
| Q |
242 |
gaaat |
246 |
Q |
| |
|
||||| |
|
|
| T |
34455979 |
gaaat |
34455975 |
T |
|
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