View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16570_low_3 (Length: 520)

Name: NF16570_low_3
Description: NF16570
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16570_low_3
NF16570_low_3
[»] chr2 (82 HSPs)
chr2 (294-434)||(36947267-36947407)
chr2 (62-293)||(21998148-21998383)
chr2 (214-298)||(36509898-36509982)
chr2 (174-290)||(22003420-22003537)
chr2 (173-295)||(30803036-30803158)
chr2 (176-293)||(43619163-43619281)
chr2 (55-193)||(39947660-39947799)
chr2 (173-295)||(36510874-36510996)
chr2 (173-294)||(39489984-39490102)
chr2 (62-293)||(45428550-45428783)
chr2 (173-293)||(10424774-10424894)
chr2 (173-293)||(40156334-40156454)
chr2 (183-294)||(29074031-29074142)
chr2 (208-293)||(20937832-20937917)
chr2 (177-293)||(26543238-26543355)
chr2 (171-295)||(38950543-38950667)
chr2 (173-293)||(39947534-39947654)
chr2 (208-295)||(3085969-3086056)
chr2 (219-293)||(39951214-39951288)
chr2 (177-294)||(43312665-43312783)
chr2 (174-293)||(28468575-28468695)
chr2 (173-277)||(33222567-33222671)
chr2 (43-130)||(3937983-3938070)
chr2 (226-293)||(39033033-39033100)
chr2 (43-130)||(43982054-43982141)
chr2 (177-278)||(14002469-14002570)
chr2 (45-130)||(17423989-17424074)
chr2 (62-240)||(7185043-7185221)
chr2 (174-293)||(44100817-44100937)
chr2 (181-296)||(17426425-17426540)
chr2 (208-283)||(39489128-39489203)
chr2 (169-294)||(5355545-5355671)
chr2 (62-124)||(28468772-28468834)
chr2 (181-289)||(3935768-3935876)
chr2 (174-289)||(41564511-41564627)
chr2 (174-293)||(28477086-28477205)
chr2 (207-294)||(30497002-30497089)
chr2 (180-293)||(17420502-17420616)
chr2 (61-123)||(25964944-25965006)
chr2 (175-295)||(30493291-30493412)
chr2 (213-293)||(15831061-15831141)
chr2 (181-293)||(42499687-42499799)
chr2 (207-289)||(3940782-3940864)
chr2 (174-295)||(5351751-5351873)
chr2 (181-294)||(15835237-15835351)
chr2 (208-294)||(28139610-28139696)
chr2 (62-124)||(42505641-42505703)
chr2 (174-295)||(43536034-43536156)
chr2 (173-278)||(29406922-29407027)
chr2 (178-294)||(39800675-39800792)
chr2 (174-250)||(12252501-12252577)
chr2 (173-293)||(28419342-28419462)
chr2 (208-280)||(29947715-29947787)
chr2 (177-257)||(37322133-37322212)
chr2 (178-293)||(39793897-39794013)
chr2 (173-293)||(41273266-41273386)
chr2 (207-295)||(42505815-42505903)
chr2 (175-297)||(7267464-7267587)
chr2 (219-278)||(36652856-36652915)
chr2 (61-124)||(45137311-45137374)
chr2 (176-289)||(208948-209062)
chr2 (208-293)||(2271790-2271876)
chr2 (243-293)||(10829098-10829148)
chr2 (207-289)||(43978474-43978556)
chr2 (176-284)||(10619942-10620051)
chr2 (208-293)||(33416064-33416149)
chr2 (162-194)||(3940710-3940742)
chr2 (213-293)||(4286029-4286109)
chr2 (162-194)||(15831187-15831219)
chr2 (162-194)||(20937958-20937990)
chr2 (173-253)||(29407905-29407985)
chr2 (174-233)||(43982193-43982253)
chr2 (207-293)||(5351897-5351984)
chr2 (162-193)||(5352025-5352056)
chr2 (214-293)||(20951105-20951184)
chr2 (173-293)||(29600698-29600815)
chr2 (173-257)||(30802014-30802095)
chr2 (237-298)||(38945691-38945752)
chr2 (224-289)||(43984404-43984469)
chr2 (174-233)||(17424126-17424186)
chr2 (162-194)||(30496930-30496962)
chr2 (174-294)||(40221149-40221269)
[»] chr3 (109 HSPs)
chr3 (62-295)||(3975664-3975899)
chr3 (19-136)||(2647816-2647933)
chr3 (61-193)||(42165224-42165357)
chr3 (61-193)||(4008202-4008335)
chr3 (173-294)||(34543154-34543275)
chr3 (62-231)||(596781-596952)
chr3 (174-293)||(50998699-50998818)
chr3 (162-293)||(1835084-1835216)
chr3 (173-293)||(27739585-27739705)
chr3 (174-295)||(4008342-4008463)
chr3 (173-293)||(11095105-11095222)
chr3 (173-294)||(12897758-12897879)
chr3 (174-285)||(2645398-2645510)
chr3 (208-296)||(19988391-19988479)
chr3 (175-294)||(4002674-4002793)
chr3 (173-293)||(16851061-16851178)
chr3 (173-293)||(27738543-27738660)
chr3 (162-293)||(29008820-29008952)
chr3 (173-296)||(11248489-11248609)
chr3 (174-293)||(3493523-3493643)
chr3 (174-293)||(3497217-3497337)
chr3 (173-299)||(12898708-12898831)
chr3 (173-293)||(28817019-28817139)
chr3 (174-296)||(3501914-3502037)
chr3 (43-130)||(34048935-34049022)
chr3 (43-130)||(46402237-46402324)
chr3 (236-294)||(2266964-2267022)
chr3 (173-293)||(26245270-26245387)
chr3 (43-129)||(54389658-54389744)
chr3 (162-293)||(35743352-35743485)
chr3 (181-293)||(42900111-42900224)
chr3 (173-297)||(32592148-32592272)
chr3 (162-293)||(34045342-34045474)
chr3 (174-293)||(41844383-41844503)
chr3 (174-293)||(46697645-46697765)
chr3 (174-293)||(49144475-49144595)
chr3 (173-296)||(7941042-7941165)
chr3 (174-293)||(35743601-35743719)
chr3 (47-130)||(49140978-49141061)
chr3 (178-293)||(2857979-2858095)
chr3 (219-293)||(19750077-19750151)
chr3 (173-295)||(19842437-19842559)
chr3 (62-124)||(50963085-50963147)
chr3 (174-294)||(41844082-41844203)
chr3 (173-293)||(11249542-11249662)
chr3 (181-293)||(46406651-46406763)
chr3 (61-124)||(50216759-50216822)
chr3 (207-297)||(46388888-46388978)
chr3 (174-263)||(8475791-8475880)
chr3 (173-294)||(10491961-10492082)
chr3 (173-298)||(14043916-14044041)
chr3 (164-293)||(16611044-16611164)
chr3 (178-295)||(17561692-17561809)
chr3 (62-123)||(20917896-20917957)
chr3 (62-123)||(20926858-20926919)
chr3 (164-293)||(22048089-22048209)
chr3 (174-293)||(2967944-2968064)
chr3 (174-289)||(3953234-3953350)
chr3 (174-266)||(4015148-4015240)
chr3 (213-293)||(4330727-4330807)
chr3 (174-293)||(42760228-42760347)
chr3 (177-293)||(50330547-50330663)
chr3 (174-293)||(50477114-50477234)
chr3 (174-296)||(6745345-6745468)
chr3 (171-293)||(9426565-9426688)
chr3 (173-255)||(6143644-6143726)
chr3 (208-294)||(26494549-26494635)
chr3 (177-275)||(32743160-32743258)
chr3 (61-123)||(42807510-42807572)
chr3 (175-289)||(45076270-45076384)
chr3 (61-138)||(51807085-51807163)
chr3 (173-266)||(4331838-4331931)
chr3 (181-294)||(34051373-34051486)
chr3 (181-293)||(2950267-2950379)
chr3 (62-122)||(3501774-3501834)
chr3 (173-277)||(10658774-10658878)
chr3 (214-294)||(16852089-16852164)
chr3 (174-294)||(42165097-42165217)
chr3 (178-295)||(42904205-42904323)
chr3 (181-293)||(49138515-49138627)
chr3 (174-294)||(1835346-1835464)
chr3 (173-294)||(21343512-21343630)
chr3 (207-293)||(16444542-16444628)
chr3 (173-263)||(42166428-42166518)
chr3 (207-293)||(46702078-46702164)
chr3 (173-278)||(11270302-11270407)
chr3 (208-257)||(24703468-24703517)
chr3 (210-295)||(25191853-25191938)
chr3 (174-294)||(54392047-54392168)
chr3 (174-295)||(2743330-2743452)
chr3 (218-298)||(41615851-41615931)
chr3 (162-194)||(46389018-46389050)
chr3 (162-194)||(46702006-46702038)
chr3 (208-295)||(20485589-20485676)
chr3 (61-134)||(30255881-30255955)
chr3 (178-297)||(41612299-41612418)
chr3 (61-123)||(49196326-49196388)
chr3 (61-115)||(47074088-47074142)
chr3 (174-295)||(1294096-1294217)
chr3 (173-278)||(2062336-2062441)
chr3 (224-289)||(30943127-30943192)
chr3 (174-233)||(2647718-2647778)
chr3 (214-282)||(26246286-26246354)
chr3 (162-194)||(42904163-42904195)
chr3 (91-123)||(44227246-44227278)
chr3 (61-124)||(48888867-48888930)
chr3 (162-194)||(50481364-50481396)
chr3 (210-278)||(51755620-51755688)
chr3 (174-233)||(54389789-54389849)
[»] chr8 (97 HSPs)
chr8 (61-284)||(43211475-43211700)
chr8 (174-294)||(15030817-15030938)
chr8 (174-294)||(45066380-45066501)
chr8 (62-292)||(15036608-15036840)
chr8 (170-293)||(32585008-32585128)
chr8 (173-293)||(2335166-2335286)
chr8 (173-295)||(27502586-27502705)
chr8 (173-293)||(28617503-28617623)
chr8 (173-293)||(914655-914772)
chr8 (174-293)||(184571-184691)
chr8 (162-293)||(22014442-22014574)
chr8 (173-293)||(27501535-27501655)
chr8 (174-293)||(36677948-36678068)
chr8 (173-293)||(44933794-44933914)
chr8 (173-296)||(5533043-5533166)
chr8 (173-294)||(28618457-28618575)
chr8 (174-293)||(22014180-22014300)
chr8 (174-278)||(28694028-28694132)
chr8 (219-295)||(43362256-43362332)
chr8 (43-130)||(486181-486268)
chr8 (219-293)||(915699-915773)
chr8 (169-293)||(21720-21845)
chr8 (224-293)||(31185514-31185583)
chr8 (173-293)||(38604266-38604386)
chr8 (173-289)||(40740845-40740961)
chr8 (174-295)||(26663052-26663174)
chr8 (65-123)||(34822903-34822961)
chr8 (173-293)||(38603248-38603365)
chr8 (174-293)||(36677646-36677767)
chr8 (174-293)||(1056220-1056340)
chr8 (160-293)||(23022292-23022426)
chr8 (208-292)||(41471029-41471113)
chr8 (237-293)||(43363342-43363398)
chr8 (62-122)||(45064374-45064434)
chr8 (213-284)||(5532405-5532476)
chr8 (174-293)||(22550884-22551003)
chr8 (173-292)||(43520794-43520913)
chr8 (62-124)||(489508-489570)
chr8 (207-293)||(489679-489765)
chr8 (174-295)||(17924302-17924424)
chr8 (62-124)||(41249953-41250015)
chr8 (62-124)||(42485417-42485479)
chr8 (208-294)||(44841927-44842013)
chr8 (164-294)||(1052491-1052622)
chr8 (174-298)||(8419333-8419458)
chr8 (177-298)||(38134134-38134255)
chr8 (208-289)||(39513240-39513321)
chr8 (181-289)||(483721-483829)
chr8 (174-289)||(7344576-7344692)
chr8 (173-289)||(13782174-13782290)
chr8 (173-289)||(34892827-34892943)
chr8 (174-290)||(39277480-39277596)
chr8 (186-294)||(39831090-39831198)
chr8 (207-294)||(25587-25674)
chr8 (226-293)||(184309-184376)
chr8 (177-256)||(3085513-3085592)
chr8 (61-124)||(39601834-39601897)
chr8 (174-299)||(23018613-23018739)
chr8 (62-124)||(39939096-39939158)
chr8 (214-295)||(2416135-2416216)
chr8 (173-294)||(32583986-32584107)
chr8 (209-278)||(36345959-36346028)
chr8 (180-296)||(39491039-39491155)
chr8 (224-295)||(2878516-2878587)
chr8 (178-293)||(20859627-20859742)
chr8 (173-266)||(31746007-31746097)
chr8 (61-123)||(43188181-43188243)
chr8 (171-266)||(45409833-45409928)
chr8 (177-295)||(16939313-16939431)
chr8 (174-295)||(32375583-32375705)
chr8 (219-293)||(42485603-42485677)
chr8 (55-123)||(25864812-25864880)
chr8 (236-289)||(37651755-37651808)
chr8 (62-115)||(39252149-39252202)
chr8 (224-293)||(40075067-40075136)
chr8 (162-194)||(2416203-2416235)
chr8 (181-293)||(22519622-22519734)
chr8 (61-124)||(5304049-5304112)
chr8 (173-240)||(10749692-10749759)
chr8 (174-257)||(12206695-12206778)
chr8 (174-257)||(12451123-12451206)
chr8 (178-290)||(26659391-26659504)
chr8 (207-289)||(22510486-22510568)
chr8 (66-124)||(39846873-39846931)
chr8 (219-293)||(42731766-42731840)
chr8 (231-293)||(45064226-45064288)
chr8 (173-296)||(3695302-3695422)
chr8 (186-295)||(20854550-20854659)
chr8 (55-124)||(35026618-35026687)
chr8 (208-257)||(39208394-39208443)
chr8 (176-261)||(39252018-39252103)
chr8 (173-257)||(7121804-7121888)
chr8 (224-284)||(17924044-17924104)
chr8 (177-257)||(22961500-22961580)
chr8 (236-272)||(31184549-31184585)
chr8 (213-293)||(37328862-37328942)
chr8 (169-205)||(45064302-45064338)
[»] chr5 (51 HSPs)
chr5 (19-136)||(30708742-30708859)
chr5 (19-136)||(28880160-28880277)
chr5 (173-293)||(3892458-3892575)
chr5 (174-293)||(27659874-27659994)
chr5 (175-293)||(8574617-8574735)
chr5 (66-294)||(8580389-8580619)
chr5 (62-293)||(14569-14801)
chr5 (174-293)||(13837658-13837778)
chr5 (174-295)||(28876575-28876697)
chr5 (61-124)||(7757455-7757518)
chr5 (174-295)||(28238071-28238193)
chr5 (208-289)||(5715-5796)
chr5 (173-293)||(3891418-3891538)
chr5 (174-293)||(37814516-37814636)
chr5 (43-130)||(19037601-19037688)
chr5 (62-194)||(28876703-28876836)
chr5 (173-278)||(30192442-30192547)
chr5 (174-289)||(14280919-14281035)
chr5 (175-278)||(18512672-18512774)
chr5 (178-293)||(38408490-38408605)
chr5 (208-294)||(11027028-11027114)
chr5 (62-124)||(28241678-28241740)
chr5 (178-294)||(11033485-11033602)
chr5 (208-289)||(41622112-41622193)
chr5 (181-294)||(38971649-38971762)
chr5 (175-292)||(11348495-11348612)
chr5 (224-293)||(38860238-38860307)
chr5 (181-293)||(19035139-19035251)
chr5 (174-293)||(19041136-19041256)
chr5 (174-293)||(30711178-30711298)
chr5 (173-289)||(41623066-41623182)
chr5 (175-293)||(8539536-8539654)
chr5 (180-278)||(18512181-18512279)
chr5 (207-293)||(28241852-28241938)
chr5 (173-295)||(35671015-35671137)
chr5 (207-289)||(35672057-35672139)
chr5 (207-293)||(38853413-38853499)
chr5 (175-252)||(2170575-2170652)
chr5 (213-266)||(8680301-8680354)
chr5 (237-293)||(37820930-37820986)
chr5 (174-293)||(13838443-13838562)
chr5 (175-284)||(14279792-14279903)
chr5 (178-295)||(30705069-30705187)
chr5 (175-289)||(40789227-40789341)
chr5 (173-295)||(42912896-42913018)
chr5 (213-278)||(35564211-35564276)
chr5 (236-289)||(35651354-35651407)
chr5 (243-296)||(38407130-38407183)
chr5 (174-233)||(19037489-19037549)
chr5 (61-124)||(19228551-19228614)
chr5 (247-295)||(39743241-39743289)
[»] chr4 (100 HSPs)
chr4 (19-136)||(40354692-40354811)
chr4 (174-293)||(3408259-3408379)
chr4 (175-293)||(26792264-26792383)
chr4 (174-294)||(26932517-26932638)
chr4 (173-296)||(55587290-55587410)
chr4 (173-293)||(14201548-14201665)
chr4 (173-293)||(23221688-23221805)
chr4 (173-293)||(51037486-51037606)
chr4 (174-293)||(21022907-21023026)
chr4 (173-294)||(55588305-55588423)
chr4 (176-293)||(31242150-31242268)
chr4 (173-293)||(38368166-38368283)
chr4 (173-293)||(18884522-18884642)
chr4 (174-298)||(30726760-30726885)
chr4 (174-290)||(20208448-20208564)
chr4 (173-293)||(23220613-23220733)
chr4 (174-293)||(31425337-31425457)
chr4 (174-293)||(54634034-54634154)
chr4 (173-293)||(40832581-40832698)
chr4 (173-293)||(46253421-46253538)
chr4 (173-294)||(40833628-40833749)
chr4 (177-293)||(49169119-49169236)
chr4 (173-290)||(50446946-50447063)
chr4 (174-293)||(37562999-37563119)
chr4 (174-293)||(52529147-52529267)
chr4 (43-130)||(6178241-6178328)
chr4 (43-130)||(41795487-41795574)
chr4 (43-130)||(49093939-49094026)
chr4 (173-295)||(54633744-54633867)
chr4 (174-294)||(37563299-37563420)
chr4 (174-293)||(1089603-1089723)
chr4 (219-295)||(7485725-7485801)
chr4 (173-293)||(38369200-38369320)
chr4 (173-277)||(48807404-48807508)
chr4 (62-124)||(1089463-1089525)
chr4 (236-294)||(29307543-29307601)
chr4 (62-124)||(30726620-30726682)
chr4 (62-124)||(40358160-40358222)
chr4 (174-295)||(41800956-41801078)
chr4 (174-282)||(40358299-40358408)
chr4 (173-293)||(14200496-14200616)
chr4 (173-293)||(46254466-46254586)
chr4 (162-293)||(49090381-49090512)
chr4 (61-124)||(50274865-50274928)
chr4 (62-124)||(1308993-1309055)
chr4 (207-293)||(6181844-6181930)
chr4 (173-293)||(7484665-7484781)
chr4 (178-299)||(13182121-13182243)
chr4 (173-275)||(27872332-27872434)
chr4 (169-294)||(30723054-30723180)
chr4 (174-267)||(39773364-39773458)
chr4 (61-123)||(55407670-55407732)
chr4 (219-295)||(18411131-18411207)
chr4 (62-122)||(21022768-21022828)
chr4 (173-289)||(43176646-43176762)
chr4 (61-119)||(8109529-8109587)
chr4 (219-293)||(21015674-21015748)
chr4 (175-289)||(48806424-48806538)
chr4 (173-258)||(28235579-28235664)
chr4 (181-294)||(41793264-41793377)
chr4 (170-293)||(53535927-53536047)
chr4 (178-293)||(13173168-13173284)
chr4 (173-289)||(37856762-37856878)
chr4 (181-293)||(49096378-49096490)
chr4 (186-296)||(30703950-30704060)
chr4 (176-295)||(40061182-40061301)
chr4 (176-293)||(1087794-1087912)
chr4 (224-294)||(6175780-6175850)
chr4 (173-263)||(16473698-16473788)
chr4 (208-294)||(26933319-26933405)
chr4 (247-293)||(55799653-55799699)
chr4 (181-294)||(3186090-3186203)
chr4 (173-294)||(11565800-11565921)
chr4 (242-295)||(39773629-39773682)
chr4 (208-293)||(40352300-40352385)
chr4 (55-124)||(51683332-51683400)
chr4 (162-194)||(6181772-6181804)
chr4 (209-257)||(37296239-37296287)
chr4 (61-123)||(67724-67786)
chr4 (178-293)||(8111438-8111553)
chr4 (173-266)||(46165707-46165797)
chr4 (178-293)||(31421640-31421756)
chr4 (61-115)||(37021941-37021995)
chr4 (208-278)||(43175684-43175754)
chr4 (208-294)||(50196963-50197049)
chr4 (243-293)||(50274694-50274744)
chr4 (207-292)||(1309167-1309252)
chr4 (224-257)||(2449677-2449710)
chr4 (181-266)||(3183943-3184028)
chr4 (213-294)||(9013927-9014008)
chr4 (243-296)||(50278887-50278940)
chr4 (174-233)||(6178129-6178189)
chr4 (162-190)||(9893246-9893274)
chr4 (237-293)||(15999882-15999938)
chr4 (213-293)||(28322175-28322255)
chr4 (162-194)||(31421766-31421798)
chr4 (177-257)||(37855830-37855910)
chr4 (174-233)||(41795375-41795435)
chr4 (174-233)||(49094078-49094138)
chr4 (174-233)||(55793914-55793974)
[»] scaffold0101 (3 HSPs)
scaffold0101 (19-136)||(36664-36781)
scaffold0101 (62-124)||(40914-40976)
scaffold0101 (213-293)||(41115-41195)
[»] chr7 (83 HSPs)
chr7 (19-135)||(15070595-15070711)
chr7 (174-293)||(18109793-18109913)
chr7 (174-295)||(10524376-10524497)
chr7 (19-102)||(42504693-42504776)
chr7 (173-294)||(42582049-42582167)
chr7 (173-294)||(46907473-46907591)
chr7 (174-294)||(7975628-7975749)
chr7 (173-296)||(49141639-49141759)
chr7 (174-295)||(10097848-10097970)
chr7 (173-295)||(12210608-12210730)
chr7 (173-293)||(7004-7124)
chr7 (174-293)||(15074247-15074367)
chr7 (171-282)||(40928943-40929055)
chr7 (183-294)||(13921292-13921403)
chr7 (219-294)||(38083741-38083816)
chr7 (214-293)||(42795139-42795218)
chr7 (174-295)||(603711-603833)
chr7 (61-276)||(10516971-10517175)
chr7 (174-295)||(18105305-18105427)
chr7 (173-293)||(42794131-42794248)
chr7 (175-293)||(45258024-45258142)
chr7 (173-293)||(8065-8185)
chr7 (174-293)||(10098136-10098256)
chr7 (174-289)||(40141245-40141361)
chr7 (174-293)||(17840909-17841028)
chr7 (175-293)||(42508047-42508166)
chr7 (173-290)||(49140594-49140708)
chr7 (43-129)||(9367848-9367934)
chr7 (162-293)||(41880448-41880580)
chr7 (174-299)||(41884145-41884271)
chr7 (176-293)||(27656973-27657090)
chr7 (225-293)||(28564605-28564673)
chr7 (173-289)||(38555431-38555547)
chr7 (62-124)||(17835208-17835270)
chr7 (173-295)||(19072370-19072492)
chr7 (62-124)||(42507906-42507968)
chr7 (63-124)||(34738495-34738556)
chr7 (181-293)||(10098267-10098379)
chr7 (173-289)||(13644360-13644476)
chr7 (237-293)||(42583142-42583198)
chr7 (170-294)||(46908488-46908612)
chr7 (174-296)||(45767880-45768002)
chr7 (62-124)||(15074107-15074169)
chr7 (176-289)||(43619643-43619757)
chr7 (173-266)||(17834449-17834542)
chr7 (173-289)||(11885898-11886014)
chr7 (177-289)||(14101387-14101499)
chr7 (177-289)||(14411404-14411516)
chr7 (178-294)||(19804512-19804628)
chr7 (174-277)||(30846814-30846917)
chr7 (181-295)||(48407347-48407462)
chr7 (181-295)||(20566386-20566500)
chr7 (173-278)||(14102366-14102471)
chr7 (173-278)||(14412383-14412488)
chr7 (62-138)||(27453499-27453576)
chr7 (181-289)||(9365584-9365692)
chr7 (247-295)||(16636335-16636383)
chr7 (247-295)||(17459255-17459303)
chr7 (247-295)||(17593911-17593959)
chr7 (178-289)||(5541566-5541677)
chr7 (178-296)||(48403303-48403422)
chr7 (173-294)||(12027274-12027394)
chr7 (224-293)||(35606723-35606792)
chr7 (173-268)||(45791268-45791360)
chr7 (162-194)||(17465694-17465726)
chr7 (178-293)||(17465736-17465852)
chr7 (178-293)||(17587362-17587478)
chr7 (162-194)||(17587488-17587520)
chr7 (174-293)||(20564007-20564127)
chr7 (214-290)||(34139728-34139804)
chr7 (179-294)||(41734125-41734240)
chr7 (209-297)||(47751238-47751326)
chr7 (61-124)||(37340435-37340498)
chr7 (219-294)||(37345167-37345242)
chr7 (61-123)||(39460660-39460722)
chr7 (61-138)||(47776449-47776527)
chr7 (61-118)||(36977733-36977790)
chr7 (162-194)||(9371368-9371400)
chr7 (162-194)||(10168239-10168271)
chr7 (162-194)||(10175764-10175796)
chr7 (162-194)||(35610396-35610428)
chr7 (213-293)||(35610474-35610554)
chr7 (243-295)||(48829895-48829947)
[»] chr6 (40 HSPs)
chr6 (174-294)||(13382562-13382683)
chr6 (19-136)||(22304934-22305051)
chr6 (173-293)||(13164278-13164395)
chr6 (43-136)||(27639433-27639526)
chr6 (173-293)||(2109452-2109572)
chr6 (173-293)||(6760890-6761010)
chr6 (174-293)||(28249819-28249939)
chr6 (43-130)||(6204682-6204769)
chr6 (43-130)||(11691649-11691736)
chr6 (181-299)||(32691079-32691198)
chr6 (236-292)||(8707917-8707973)
chr6 (174-293)||(18351662-18351782)
chr6 (173-293)||(25554640-25554760)
chr6 (172-295)||(15888817-15888939)
chr6 (173-296)||(17597542-17597666)
chr6 (174-293)||(27616649-27616769)
chr6 (169-293)||(30825984-30826109)
chr6 (174-293)||(26711983-26712102)
chr6 (181-297)||(27641778-27641894)
chr6 (214-293)||(13158370-13158449)
chr6 (214-293)||(13163226-13163305)
chr6 (173-263)||(26349940-26350029)
chr6 (214-295)||(35096604-35096685)
chr6 (219-295)||(11688046-11688122)
chr6 (215-293)||(455404-455482)
chr6 (181-294)||(6207120-6207233)
chr6 (224-293)||(11694130-11694199)
chr6 (162-194)||(11688174-11688206)
chr6 (162-194)||(30829632-30829664)
chr6 (61-124)||(6320407-6320470)
chr6 (242-293)||(31768687-31768738)
chr6 (174-264)||(26351115-26351205)
chr6 (173-290)||(14124736-14124853)
chr6 (264-293)||(15546428-15546457)
chr6 (170-252)||(117237-117316)
chr6 (243-295)||(117923-117975)
chr6 (174-233)||(6204821-6204881)
chr6 (174-233)||(22305102-22305162)
chr6 (213-289)||(24719880-24719956)
chr6 (213-289)||(30829710-30829786)
[»] scaffold0180 (2 HSPs)
scaffold0180 (61-193)||(15501-15634)
scaffold0180 (174-293)||(15641-15760)
[»] chr1 (68 HSPs)
chr1 (19-136)||(13636252-13636369)
chr1 (61-193)||(2425565-2425697)
chr1 (173-293)||(30195405-30195522)
chr1 (173-297)||(4883164-4883288)
chr1 (173-295)||(586623-586745)
chr1 (173-293)||(19914401-19914521)
chr1 (214-293)||(47652662-47652741)
chr1 (174-282)||(19161838-19161946)
chr1 (177-293)||(2365169-2365286)
chr1 (174-293)||(8548688-8548808)
chr1 (214-293)||(43011762-43011841)
chr1 (218-293)||(43012708-43012783)
chr1 (173-293)||(585589-585706)
chr1 (208-293)||(38633207-38633292)
chr1 (162-293)||(3732360-3732492)
chr1 (62-193)||(29622304-29622436)
chr1 (174-295)||(3728667-3728789)
chr1 (174-293)||(15051367-15051487)
chr1 (62-124)||(19924888-19924950)
chr1 (173-289)||(13761062-13761178)
chr1 (175-257)||(19915338-19915417)
chr1 (178-293)||(22397754-22397870)
chr1 (174-293)||(26879314-26879434)
chr1 (61-124)||(22524258-22524321)
chr1 (214-293)||(37991547-37991626)
chr1 (174-279)||(29622443-29622549)
chr1 (62-124)||(30890193-30890255)
chr1 (62-124)||(31783596-31783658)
chr1 (170-293)||(15696749-15696869)
chr1 (178-295)||(21140958-21141075)
chr1 (175-295)||(50036780-50036901)
chr1 (179-295)||(4208329-4208445)
chr1 (174-289)||(38771567-38771683)
chr1 (165-293)||(26875627-26875756)
chr1 (207-293)||(19924689-19924775)
chr1 (173-259)||(30194390-30194476)
chr1 (219-293)||(30889995-30890069)
chr1 (173-289)||(20353953-20354070)
chr1 (208-257)||(48228355-48228404)
chr1 (177-289)||(12627178-12627290)
chr1 (173-293)||(18609913-18610033)
chr1 (213-293)||(22528656-22528736)
chr1 (170-293)||(49661748-49661871)
chr1 (207-293)||(13629338-13629424)
chr1 (173-270)||(5330032-5330129)
chr1 (213-270)||(38632449-38632506)
chr1 (219-296)||(44621182-44621259)
chr1 (162-194)||(2365295-2365327)
chr1 (177-289)||(5329062-5329174)
chr1 (213-293)||(8473717-8473797)
chr1 (162-194)||(8473846-8473878)
chr1 (61-138)||(47502431-47502509)
chr1 (175-270)||(49429155-49429250)
chr1 (61-119)||(11183314-11183372)
chr1 (247-293)||(19928938-19928984)
chr1 (62-119)||(45825023-45825080)
chr1 (221-255)||(51461118-51461152)
chr1 (224-289)||(20556836-20556901)
chr1 (173-296)||(27649188-27649308)
chr1 (208-257)||(42290267-42290316)
chr1 (173-266)||(45977716-45977809)
chr1 (170-257)||(51461868-51461952)
chr1 (173-299)||(9618650-9618773)
chr1 (174-233)||(13636141-13636201)
chr1 (173-295)||(21700864-21700983)
chr1 (61-124)||(23275987-23276050)
chr1 (219-295)||(29356736-29356812)
chr1 (246-294)||(46319683-46319731)
[»] scaffold0199 (1 HSPs)
scaffold0199 (174-293)||(10587-10706)
[»] scaffold0494 (2 HSPs)
scaffold0494 (208-293)||(11507-11592)
scaffold0494 (162-194)||(11434-11466)
[»] scaffold0634 (2 HSPs)
scaffold0634 (174-294)||(7351-7472)
scaffold0634 (62-193)||(7479-7611)
[»] scaffold0038 (1 HSPs)
scaffold0038 (174-293)||(49981-50101)
[»] scaffold0016 (2 HSPs)
scaffold0016 (208-294)||(69274-69360)
scaffold0016 (242-293)||(68349-68400)
[»] scaffold0094 (1 HSPs)
scaffold0094 (236-294)||(239-297)
[»] scaffold0293 (2 HSPs)
scaffold0293 (174-290)||(741-858)
scaffold0293 (62-193)||(602-734)
[»] scaffold0184 (1 HSPs)
scaffold0184 (62-138)||(18175-18251)
[»] scaffold0078 (1 HSPs)
scaffold0078 (62-138)||(54593-54669)
[»] scaffold0744 (1 HSPs)
scaffold0744 (174-293)||(442-561)
[»] scaffold0014 (1 HSPs)
scaffold0014 (181-293)||(84481-84593)
[»] scaffold1606 (1 HSPs)
scaffold1606 (224-293)||(31-100)
[»] scaffold0092 (1 HSPs)
scaffold0092 (174-257)||(54536-54619)
[»] scaffold0238 (1 HSPs)
scaffold0238 (166-296)||(18897-19026)
[»] scaffold0504 (1 HSPs)
scaffold0504 (174-263)||(12347-12436)
[»] scaffold0065 (1 HSPs)
scaffold0065 (209-289)||(65256-65337)
[»] scaffold0176 (1 HSPs)
scaffold0176 (214-290)||(653-729)
[»] scaffold0268 (1 HSPs)
scaffold0268 (256-290)||(15490-15524)
[»] scaffold0019 (1 HSPs)
scaffold0019 (208-257)||(127472-127521)
[»] scaffold0011 (1 HSPs)
scaffold0011 (174-266)||(236279-236371)


Alignment Details
Target: chr2 (Bit Score: 137; Significance: 3e-71; HSPs: 82)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 294 - 434
Target Start/End: Complemental strand, 36947407 - 36947267
Alignment:
Q  294 ttatatgaatgtggtgggtttgtgggtgtgtgtataaacatctaagattgaaatatttacaacaattttcactggagtattattgtagtttgatgaagga 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  36947407 ttatatgaatgtggtgggtttgtgggtgtgtgtataaacatctaagattgaaatatttacaacaattttcattggagtattattgtagtttgatgaagga 36947308  T
Q  394 atgatagttcattttgttactttcatggtctctactttaca 434  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36947307 atgatagttcattttgttactttcatggtctctactttaca 36947267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 62 - 293
Target Start/End: Complemental strand, 21998383 - 21998148
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaag----ttttggaaaatggggaactct-gttctg 156  Q
    ||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||   ||||    |||| | |||||||    ||| ||||||    
T  21998383 ttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgagaattt--agaaggttttttttggaaatgggaggttctggttctg 21998286  T
Q  157 tgatttggttatgttcagttttcctcggcagttaactggcgccggttt-cacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgt 255  Q
     | | ||||||||||||||||||||||||||||||||| ||||||||| |  |||| ||||| ||   ||| ||||||| ||||||||||||||||||||    
T  21998285 cgttctggttatgttcagttttcctcggcagttaactgccgccggtttcctaaaaacttcggcagcaaactaccgaagggcatttgagtaatttactcgt 21998186  T
Q  256 gtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    ||| |||| |||||| | ||||||||||| ||||||||    
T  21998185 gtggcacaaccaaactatatgtgggaacatcaattctc 21998148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 214 - 298
Target Start/End: Complemental strand, 36509982 - 36509898
Alignment:
Q  214 tcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctcttata 298  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36509982 tcggtagtttactgccgagggacatttgagtaatttactcgtgtgacatagccaaaccaaatgtgggaacaacaattctcttata 36509898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 174 - 290
Target Start/End: Original strand, 22003420 - 22003537
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||||  ||||  ||||| |||||||| ||||||| ||||||||||||||||||||||| |||||||||||||    
T  22003420 gttttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttgagtaatttactcgtgtggcacagccaaacca 22003519  T
Q  273 aatgtgggaacaacaatt 290  Q
    |||||||||||| |||||    
T  22003520 aatgtgggaacagcaatt 22003537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 30803036 - 30803158
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  ||||  ||   |||| ||||| |||| |||||||| |||||||||||||||||||||||||| |||||||||||||    
T  30803036 agttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgagggacatttgagtaatttactcgtgtggcacagccaaacca 30803135  T
Q  273 aatgtgggaacaacaattctctt 295  Q
    |||||||||||||||||| ||||    
T  30803136 aatgtgggaacaacaattttctt 30803158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 176 - 293
Target Start/End: Original strand, 43619163 - 43619281
Alignment:
Q  176 tttcctcggcagttaactggcgccggttt-cacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaa 274  Q
    ||||||||||||||||||| ||||||||| |  |||| ||||| |||| ||||||||||| ||||||| ||||||||||||||| |||||||||||||||    
T  43619163 tttcctcggcagttaactgccgccggtttactaaaaacttcggcagttaactgccgaagggcatttgattaatttactcgtgtggcacagccaaaccaaa 43619262  T
Q  275 tgtgggaacaacaattctc 293  Q
    |||||||||| ||||||||    
T  43619263 tgtgggaacagcaattctc 43619281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 55 - 193
Target Start/End: Complemental strand, 39947799 - 39947660
Alignment:
Q  55 tgtgtcgttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagttttggaaaatggggaactct-gtt 153  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||||| || ||  ||||||||||||||||||||||||||| || ||| |||    
T  39947799 tgtgccgttgatttgcttgcaattcgtgaaagaagatttggtgaagattggagaaaatttatgaattttgtgaagttttggaaaatgggaaagtctggtt 39947700  T
Q  154 ctgtgatttggttatgttcagttttcctcggcagttaact 193  Q
    ||| | | | |||  |||||| ||||||| ||||||||||    
T  39947699 ctgcgttctagtttagttcagatttcctctgcagttaact 39947660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 36510874 - 36510996
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  ||||  ||   |||| ||||| |||| |||||||| ||  ||||||||||||||||||||||||||||||||||||    
T  36510874 agttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggtatttgagtaatttactcgtgtgacacagccaaacca 36510973  T
Q  273 aatgtgggaacaacaattctctt 295  Q
    || ||||||||||||||||||||    
T  36510974 aaagtgggaacaacaattctctt 36510996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 173 - 294
Target Start/End: Original strand, 39489984 - 39490102
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  |||||||||| ||   ||| | |||| |||||||| |||||||||| |||||||| |||||| || ||||||||||    
T  39489984 agttttcctcggcagttaactgcagccggtttcataa---ttcagcagttaactgccgagggacatttgaataatttacccgtgtggcatagccaaacca 39490080  T
Q  273 aatgtgggaacaacaattctct 294  Q
    ||||||||||||||||||||||    
T  39490081 aatgtgggaacaacaattctct 39490102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 62 - 293
Target Start/End: Complemental strand, 45428783 - 45428550
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagttttggaaaatggggaactctg-ttctgtgat 160  Q
    ||||||||||||||||||||||||   ||||||| ||||||  |||||||||||  || ||||  ||| ||| | ||||| | |  |||| ||||| | |    
T  45428783 ttgatttgcttgcaattcgtgaaaatggatttggagaagatttgagagaaattgttaaatttgaaaaggttttggaaatgagaagttctggttctgcgtt 45428684  T
Q  161 ttggttatgttcagttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtga 259  Q
     ||||||||| |||||||| |||||||||||||| ||||||||||  ||||  ||| | |||||||| |||||||  ||||  ||| |||||||||||||    
T  45428683 ctggttatgtccagttttcttcggcagttaactgccgccggtttcctaaaaacttcagcagtttactaccgaagggtatttccgtattttactcgtgtga 45428584  T
Q  260 cacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||||||| |  | ||||||||||||||||||||    
T  45428583 cacagccatattatatgtgggaacaacaattctc 45428550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 10424894 - 10424774
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  ||||  ||   |||| ||||| |||| ||||| || || ||||||||||||||||||||||| |||||||||||||    
T  10424894 agttttcctcggcagttaactgtagccgtatttctaaaacttcggcagttaactgctgaggggcatttgagtaatttactcgtgtggcacagccaaacca 10424795  T
Q  273 aatgtgggaacaacaattctc 293  Q
    |||||||||||| ||||||||    
T  10424794 aatgtgggaacagcaattctc 10424774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 40156454 - 40156334
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||| ||||||||||  ||||||||  ||||||||||| | || |||| ||| || ||||||||||||||||||||||  | |||||||||||    
T  40156454 agttttcctcgtcagttaactgcagccggtttttcaaaatttcggcaattaactgtcgaggggcatttgagtaatttactcgtgtttctcagccaaacca 40156355  T
Q  273 aatgtgggaacaacaattctc 293  Q
    ||||| |||||||||||||||    
T  40156354 aatgtaggaacaacaattctc 40156334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 183 - 294
Target Start/End: Original strand, 29074031 - 29074142
Alignment:
Q  183 ggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaa 282  Q
    |||||||||||| ||| || ||   |||| ||||| |||| |||||||| || ||||||||||||||||||||||| |||| ||||||||||||||||||    
T  29074031 ggcagttaactgccgctggatttctaaaacttcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcacaaccaaaccaaatgtgggaa 29074130  T
Q  283 caacaattctct 294  Q
    ||||||||||||    
T  29074131 caacaattctct 29074142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 208 - 293
Target Start/End: Complemental strand, 20937917 - 20937832
Alignment:
Q  208 aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||| ||||| |||| ||||||||||| |||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20937917 aaaacttcggcagttaactgccgaagggcatttaggtaatttactcgtgtggcacagccaaaccaaatgtgggaacaacaattctc 20937832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 177 - 293
Target Start/End: Complemental strand, 26543355 - 26543238
Alignment:
Q  177 ttcctcggcagttaactggcgccggttt-cacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaat 275  Q
    ||||| |||||||||||| ||||||||| |  |||| ||||  |||||| |||||||||||||||  ||||  |||||||||| ||||||||||||||||    
T  26543355 ttccttggcagttaactgccgccggtttactaaaaacttcgacagtttagtgccgaaggacattttcgtaaagtactcgtgtggcacagccaaaccaaat 26543256  T
Q  276 gtgggaacaacaattctc 293  Q
    ||||||||||||||||||    
T  26543255 gtgggaacaacaattctc 26543238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 38950543 - 38950667
Alignment:
Q  171 tcagttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaac 270  Q
    |||| ||||||||||||||||||| ||||||||||  ||||  |||||||   ||||||||||| |||||  ||| |||||||||| |||||||||||||    
T  38950543 tcagatttcctcggcagttaactgtcgccggtttcctaaaacctcggtagcaaactgccgaagggcattttcgtattttactcgtgcgacacagccaaac 38950642  T
Q  271 caaatgtgggaacaacaattctctt 295  Q
     | |||||||||||||||| |||||    
T  38950643 aacatgtgggaacaacaatactctt 38950667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 39947654 - 39947534
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||||||||||||||||| |||||||||   |||| ||||  |||||||| |||||||  ||||  ||||  |||||||||| |||||| ||||||    
T  39947654 agttttcctcggcagttaactgccgccggtttactaaaacttcgacagtttactaccgaagggtattttcgtaaagtactcgtgtggcacagcaaaacca 39947555  T
Q  273 aatgtgggaacaacaattctc 293  Q
    |||||||||||||||||||||    
T  39947554 aatgtgggaacaacaattctc 39947534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 208 - 295
Target Start/End: Complemental strand, 3086056 - 3085969
Alignment:
Q  208 aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctctt 295  Q
    |||| ||||| |||| |||||||| | |||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  3086056 aaaacttcggcagttaactgccgaggaacatttgagtaatttactcgtgtggcacaaccaaactaaatgtgggaacaacaattctctt 3085969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 219 - 293
Target Start/End: Original strand, 39951214 - 39951288
Alignment:
Q  219 agtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||| |||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  39951214 agttaactgccgaggagcatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacagcaattctc 39951288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 177 - 294
Target Start/End: Complemental strand, 43312783 - 43312665
Alignment:
Q  177 ttcctcggcagttaactggcgccggttt-cacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaat 275  Q
    |||||||||||||||||| ||| ||||| |  |||| ||||| |||||||||||||||| |||||  ||||  || |||||||  |||||||||||||||    
T  43312783 ttcctcggcagttaactgccgctggtttactaaaaacttcggcagtttactgccgaagggcattttcgtaaaatattcgtgtggtacagccaaaccaaat 43312684  T
Q  276 gtgggaacaacaattctct 294  Q
    |||||||||||||||||||    
T  43312683 gtgggaacaacaattctct 43312665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 174 - 293
Target Start/End: Complemental strand, 28468695 - 28468575
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcaca-aaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||||  | ||| ||||| ||||||||  ||||||  ||||| ||| |||||||||||| ||||||||||| |    
T  28468695 gttttcctcggcagttaactgccgccggtttccaacaaacttcggcagtttactatcgaagggtatttgcgtattttactcgtgtggcacagccaaacta 28468596  T
Q  273 aatgtgggaacaacaattctc 293  Q
     | ||||||||||||||||||    
T  28468595 tacgtgggaacaacaattctc 28468575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 173 - 277
Target Start/End: Complemental strand, 33222671 - 33222567
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  |||||||    ||||||||||||||| |||||||| |  ||||||||||||||||||||||  | |||||||||||    
T  33222671 agttttcctcggcagttaactgcagccggttctttaaaatttcggtagttaactgccgaggagcatttgagtaatttactcgtgtttctcagccaaacca 33222572  T
Q  273 aatgt 277  Q
    |||||    
T  33222571 aatgt 33222567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 3938070 - 3937983
Alignment:
Q  43 atataatataagtgtgtcgttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagt 130  Q
    |||||||||||||||  |||||||||||| |||||||||||||||||| |||| ||||||  ||||||| ||||||| ||||||||||    
T  3938070 atataatataagtgtcccgttgatttgctcgcaattcgtgaaagaagaattggcgaagatttgagagaacttgagaactttgtgaagt 3937983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 226 - 293
Target Start/End: Complemental strand, 39033100 - 39033033
Alignment:
Q  226 tgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||||| | ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  39033100 tgccgaggaacatttgagtaatttactcgtgtggtacagccaaaccaaatgtgggaacaacaattctc 39033033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 43982054 - 43982141
Alignment:
Q  43 atataatataagtgtgtcgttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagt 130  Q
    |||||||||||||||  |||||||||||| |||||||||||||||||| |||| ||||||  ||||||| ||||||| ||||||||||    
T  43982054 atataatataagtgtcccgttgatttgctcgcaattcgtgaaagaagaattggcgaagatttgagagaacttgagaactttgtgaagt 43982141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 177 - 278
Target Start/End: Complemental strand, 14002570 - 14002469
Alignment:
Q  177 ttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatg 276  Q
    ||||||||||||||||||  |||||||    |||||||| | |||| |||||||| |||||||||||||||||||||||||  | |||||||||||||||    
T  14002570 ttcctcggcagttaactgcagccggttctttaaaatttcagcagttaactgccgagggacatttgagtaatttactcgtgtttctcagccaaaccaaatg 14002471  T
Q  277 tg 278  Q
    ||    
T  14002470 tg 14002469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 17423989 - 17424074
Alignment:
Q  45 ataatataagtgtgtcgttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagt 130  Q
    |||||||||||||  |||||||||||| |||||||||||||||||| |||| ||||||  ||||||| ||||||| ||||||||||    
T  17423989 ataatataagtgtcccgttgatttgctcgcaattcgtgaaagaagaattggcgaagatttgagagaacttgagaactttgtgaagt 17424074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 62 - 240
Target Start/End: Complemental strand, 7185221 - 7185043
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtga-agttttggaaaatggggaactct-gttctgtga 159  Q
    ||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||  |  ||||||| ||||||| |  ||| |||||| ||    
T  7185221 ttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgagaattttgaaattgttttgg-aaatgggaagttctggttctgcga 7185123  T
Q  160 tttggttatgttcagttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacattt 240  Q
      || ||| || ||| |||||||||||||| |||| |||||||||   |||| ||||| |||| ||||||||||| |||||    
T  7185122 -atgattaagtccagatttcctcggcagtttactgtcgccggtttactaaaaattcggcagttaactgccgaagggcattt 7185043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 44100817 - 44100937
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||||  ||||  ||||||||   |||||||||||  ||||   || |||||||||||| ||||||||||| |    
T  44100817 gttttcctcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggtattttcatattttactcgtgtggcacagccaaacaa 44100916  T
Q  273 aatgtgggaacaacaattctc 293  Q
     ||||||||||||||||||||    
T  44100917 catgtgggaacaacaattctc 44100937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 181 - 296
Target Start/End: Original strand, 17426425 - 17426540
Alignment:
Q  181 tcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtggg 280  Q
    |||||||||||||| |||||||| |  ||||  || ||||   |||||||| ||||||||  ||| |||||||||||| ||||||||||| | |||||||    
T  17426425 tcggcagttaactgccgccggttcctaaaaacctcagtagcaaactgccgagggacatttttgtattttactcgtgtggcacagccaaactatatgtggg 17426524  T
Q  281 aacaacaattctctta 296  Q
    ||||||||||||||||    
T  17426525 aacaacaattctctta 17426540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 208 - 283
Target Start/End: Complemental strand, 39489203 - 39489128
Alignment:
Q  208 aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaac 283  Q
    |||| ||||| |||| |||||||||||  |||||||||||||||||||||| ||||||||||||||| ||||||||    
T  39489203 aaaacttcggcagttaactgccgaagggtatttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaac 39489128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 5355545 - 5355671
Alignment:
Q  169 gttcagttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagcca 267  Q
    |||||| ||| ||||||||||||||| |||||||| |  ||||  ||||||||   ||||||||||| |||||  ||| |||||||||||| ||||||||    
T  5355545 gttcagatttactcggcagttaactgccgccggttgcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagcca 5355644  T
Q  268 aaccaaatgtgggaacaacaattctct 294  Q
    ||| | ||||||||||| |||||||||    
T  5355645 aacaacatgtgggaacagcaattctct 5355671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 28468834 - 28468772
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    ||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||    
T  28468834 ttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgagaattttg 28468772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 289
Target Start/End: Complemental strand, 3935876 - 3935768
Alignment:
Q  181 tcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtggg 280  Q
    |||||||||||||| |||||||| |  ||||  |||||||   |||||||||||||||||  ||| |||||||||||| ||||||||||| | |||||||    
T  3935876 tcggcagttaactgccgccggttcctaaaaacctcggtagcaaactgccgaaggacattttggtattttactcgtgtggcacagccaaactatatgtggg 3935777  T
Q  281 aacaacaat 289  Q
    |||| ||||    
T  3935776 aacagcaat 3935768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 174 - 289
Target Start/End: Original strand, 41564511 - 41564627
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatt-tcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||||  ||||   |||||||   |||||||||||  ||||  ||| |||||||||||| ||||||||||| |    
T  41564511 gttttcctcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaa 41564610  T
Q  273 aatgtgggaacaacaat 289  Q
     ||||||||||||||||    
T  41564611 catgtgggaacaacaat 41564627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 28477086 - 28477205
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaa 273  Q
    |||||||||||||||||||||  ||||  ||   |||| ||||| |||| |||| ||| || |||| ||||||||| |||||||| |||| |||||| |     
T  28477086 gttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgtcgaggggcattagagtaatttgctcgtgtggcacaaccaaactat 28477185  T
Q  274 atgtgggaacaacaattctc 293  Q
    ||||||||||||||||||||    
T  28477186 atgtgggaacaacaattctc 28477205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 30497002 - 30497089
Alignment:
Q  207 caaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctct 294  Q
    ||||| ||||| |||| ||||||||||| |||||  ||| |||||||||||| |||||||| || | |||||||||||||||||||||    
T  30497002 caaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacaacaattctct 30497089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 180 - 293
Target Start/End: Complemental strand, 17420616 - 17420502
Alignment:
Q  180 ctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtg 278  Q
    ||||||||||||||| ||||||||||  ||||  ||||||||   ||||||||||| |||||  ||| |||||||||||| |||||||| || | |||||    
T  17420616 ctcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtg 17420517  T
Q  279 ggaacaacaattctc 293  Q
    |||||| ||||||||    
T  17420516 ggaacagcaattctc 17420502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 61 - 123
Target Start/End: Complemental strand, 25965006 - 25964944
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaatttt 123  Q
    |||||||||||||||||||||||||   | |||||||||||| ||||||||||||||||||||    
T  25965006 gttgatttgcttgcaattcgtgaaaatggctttggtgaagattggagagaaattgagaatttt 25964944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 175 - 295
Target Start/End: Complemental strand, 30493412 - 30493291
Alignment:
Q  175 ttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaa 273  Q
    |||||||||||||||||||  ||||| || |  ||||  ||||||||   ||||||||||| |||||  ||| |||||||||||| ||||||||||| |     
T  30493412 ttttcctcggcagttaactaccgccgattgcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccaaacaag 30493313  T
Q  274 atgtgggaacaacaattctctt 295  Q
    ||||||||||| ||||||||||    
T  30493312 atgtgggaacagcaattctctt 30493291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 213 - 293
Target Start/End: Complemental strand, 15831141 - 15831061
Alignment:
Q  213 ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||||||||| |||||||||||  ||||  ||| |||||||||||| |||||||| || | ||||||||||||||||||||    
T  15831141 ttcggtagttaactgccgaagggaattttcgtattttactcgtgtggcacagccatactatatgtgggaacaacaattctc 15831061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 181 - 293
Target Start/End: Complemental strand, 42499799 - 42499687
Alignment:
Q  181 tcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtggg 280  Q
    |||||||||||||| |||||||| |  ||||  |||||||   |||||| |||| |||||  ||| |||||||||||| ||||||||||| | |||||||    
T  42499799 tcggcagttaactgccgccggttcctaaaaacctcggtagcaaactgccaaagggcattttggtattttactcgtgtggcacagccaaactatatgtggg 42499700  T
Q  281 aacaacaattctc 293  Q
    |||| ||||||||    
T  42499699 aacagcaattctc 42499687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 207 - 289
Target Start/End: Original strand, 3940782 - 3940864
Alignment:
Q  207 caaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaat 289  Q
    ||||| ||||| |||| ||||||||||| |||||  ||| |||||||||||| |||||||| || | ||||||||||||||||    
T  3940782 caaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacaacaat 3940864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 174 - 295
Target Start/End: Original strand, 5351751 - 5351873
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatt-tcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||  ||||||||||  ||||   |||||||   |||||||||||  ||||  ||| |||||||||||| ||||||||||| |    
T  5351751 gttttcctcggcagttaactaccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaa 5351850  T
Q  273 aatgtgggaacaacaattctctt 295  Q
     ||||||||||| |||| |||||    
T  5351851 catgtgggaacagcaatactctt 5351873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 181 - 294
Target Start/End: Original strand, 15835237 - 15835351
Alignment:
Q  181 tcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgg 279  Q
    |||||||||||||| ||||||||||  ||||  ||||||||   |||||||| |  |||||   || |||||||||||| ||||||||||| | ||||||    
T  15835237 tcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaggagcattttgatattttactcgtgtggcacagccaaacaacatgtgg 15835336  T
Q  280 gaacaacaattctct 294  Q
    |||||||||||||||    
T  15835337 gaacaacaattctct 15835351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 294
Target Start/End: Original strand, 28139610 - 28139696
Alignment:
Q  208 aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctct 294  Q
    ||||||||||||||| |||| ||||||  |||||| ||| ||||||||||  | |||||||| |||||||| |||||||||| ||||    
T  28139610 aaaatttcggtagttaactgtcgaagggtatttgaataaattactcgtgtttctcagccaaatcaaatgtgtgaacaacaatactct 28139696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 42505641 - 42505703
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    ||||||||||||||||||||||||   |||||||||||||| |||||||| |||| |||||||    
T  42505641 ttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaatttgaaaattttg 42505703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 174 - 295
Target Start/End: Complemental strand, 43536156 - 43536034
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| || ||||| |  ||||  ||||||||   |||| |||| | |||||  ||| |||||||||||| ||||||||||| |    
T  43536156 gttttcctcggcagttaactgtcgtcggttgcctaaaaacttcggtagcaaactgtcgaacggcatttttgtattttactcgtgtggcacagccaaacaa 43536057  T
Q  273 aatgtgggaacaacaattctctt 295  Q
     ||||||||||| ||||||||||    
T  43536056 gatgtgggaacagcaattctctt 43536034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 278
Target Start/End: Complemental strand, 29407027 - 29406922
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||| ||  |||||||    |||||||||| |||| |||||||||||  || || |||| ||||||||||  | |||||||||||    
T  29407027 agttttcctcggcagttaattgcagccggttctttaaaatttcggcagttaactgccgaagggtatctgggtaaattactcgtgtttctcagccaaacca 29406928  T
Q  273 aatgtg 278  Q
    ||||||    
T  29406927 aatgtg 29406922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 178 - 294
Target Start/End: Original strand, 39800675 - 39800792
Alignment:
Q  178 tcctcggcagttaactggcgccggtttca-caaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatg 276  Q
    ||||||| ||||  ||| ||||||||| | ||||| ||||| |||| ||||||||||| |||||   || |||||||||||| |||||||| || | |||    
T  39800675 tcctcggtagtttgctgccgccggtttaatcaaaacttcggcagttaactgccgaagggcattttgatattttactcgtgtggcacagccatactatatg 39800774  T
Q  277 tgggaacaacaattctct 294  Q
    |||||||| |||||||||    
T  39800775 tgggaacagcaattctct 39800792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 12252501 - 12252577
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaattta 250  Q
    ||||||||||| |||||||||  |||||||    |||||||||  |||| |||||||||||||||||||||||||||    
T  12252501 gttttcctcggaagttaactgcagccggttctttaaaatttcgacagttaactgccgaaggacatttgagtaattta 12252577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 28419462 - 28419342
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||||||| ||||||||  |||||||||   |||| ||||| |||| ||||||||||| |||||  ||||  |||||||||| |||||||  | ||    
T  28419462 agttttcctcggtagttaactaccgccggtttactaaaacttcggcagttaactgccgaagggcatttaggtaaaatactcgtgtggcacagccttatca 28419363  T
Q  273 aatgtgggaacaacaattctc 293  Q
    ||||||  |||| ||||||||    
T  28419362 aatgtgtaaacagcaattctc 28419342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 280
Target Start/End: Complemental strand, 29947787 - 29947715
Alignment:
Q  208 aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtggg 280  Q
    |||| ||||| |||| |||||||| || ||||||||||||||||||||||  |||| |||||||||| |||||    
T  29947787 aaaacttcggcagttaactgccgaggggcatttgagtaatttactcgtgtagcacaaccaaaccaaacgtggg 29947715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 37322133 - 37322212
Alignment:
Q  177 ttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgt 257  Q
    ||||||||||||||||||  |||||||   ||||||||||| |||| ||||||| ||| ||||||||||||||| ||||||    
T  37322133 ttcctcggcagttaactgcagccggttcttcaaaatttcggcagttaactgccg-agggcatttgagtaatttattcgtgt 37322212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 39794013 - 39793897
Alignment:
Q  178 tcctcggcagttaactggcgccggtttca-caaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatg 276  Q
    ||||||| ||||  ||| ||||||||| | ||||| ||||| |||| ||||||||||| |||||   || |||||||||||| |||||||| || | |||    
T  39794013 tcctcggtagtttgctgccgccggtttaatcaaaacttcggcagttaactgccgaagggcattttgatattttactcgtgtggcacagccatactatatg 39793914  T
Q  277 tgggaacaacaattctc 293  Q
    |||||||| ||||||||    
T  39793913 tgggaacagcaattctc 39793897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 41273266 - 41273386
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||||||||||||||||| ||||| |||   |||| ||||| |||| ||||||||||| |||||   |||  |||||||||| |||||||| |       
T  41273266 agttttcctcggcagttaactgccgccgatttactaaaacttcggcagttaactgccgaagggcattttcataaagtactcgtgtggcacagccatatgt 41273365  T
Q  273 aatgtgggaacaacaattctc 293  Q
    ||||||  |||||||||||||    
T  41273366 aatgtgtaaacaacaattctc 41273386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 207 - 295
Target Start/End: Original strand, 42505815 - 42505903
Alignment:
Q  207 caaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctctt 295  Q
    ||||| ||||| |||| |||||||||||  ||||  ||| |||||||||||| |||||||| || | ||||||||||| ||||||||||    
T  42505815 caaaacttcggcagttaactgccgaagggtattttggtattttactcgtgtggcacagccatactatatgtgggaacagcaattctctt 42505903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 175 - 297
Target Start/End: Original strand, 7267464 - 7267587
Alignment:
Q  175 ttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaa 273  Q
    ||||||| |||||||||||| |||||||| |  ||||  ||||||||   |||||||| |  |||||  ||| |||||||||||| ||||||||||| |     
T  7267464 ttttccttggcagttaactgccgccggttccctaaaaacttcggtagcaaactgccgatgagcattttcgtattttactcgtgtggcacagccaaacaac 7267563  T
Q  274 atgtgggaacaacaattctcttat 297  Q
    |||||| |||| ||||||||||||    
T  7267564 atgtggaaacagcaattctcttat 7267587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 36652915 - 36652856
Alignment:
Q  219 agtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtg 278  Q
    |||| |||||||| |||||||| ||||| ||||||||||| | |||||||||||||||||    
T  36652915 agttaactgccgatggacatttaagtaaattactcgtgtgtctcagccaaaccaaatgtg 36652856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 45137311 - 45137374
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    |||||||||||||||||| ||||||   | |||||||||||| |||||||||||| ||||||||    
T  45137311 gttgatttgcttgcaatttgtgaaaatggctttggtgaagattggagagaaattgtgaattttg 45137374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 289
Target Start/End: Complemental strand, 209062 - 208948
Alignment:
Q  176 tttcctcggcagttaactggcgccggtttcacaaaatt-tcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaa 274  Q
    ||||||||||||||||||  ||||||||||  ||||   |||||||   |||||||||||  ||||  ||| |||||||||||| ||||||||||| | |    
T  209062 tttcctcggcagttaactaccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaaca 208963  T
Q  275 tgtgggaacaacaat 289  Q
    |||||||||| ||||    
T  208962 tgtgggaacagcaat 208948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 2271790 - 2271876
Alignment:
Q  208 aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaac-caaatgtgggaacaacaattctc 293  Q
    |||||||||| |||| || ||||| ||  |||||||||||||||||||||  | ||||||||| |||||||| ||||| ||||||||    
T  2271790 aaaatttcggcagttaacggccgaggggtatttgagtaatttactcgtgttcctcagccaaactcaaatgtgtgaacatcaattctc 2271876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 293
Target Start/End: Original strand, 10829098 - 10829148
Alignment:
Q  243 gtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||| ||||||||||| | ||||||||||||| ||||||||||||||||||    
T  10829098 gtaaattactcgtgtgtctcagccaaaccaaacgtgggaacaacaattctc 10829148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 289
Target Start/End: Complemental strand, 43978556 - 43978474
Alignment:
Q  207 caaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaat 289  Q
    ||||| ||||| |||| ||||||||||| |||||  ||| |||||||||||| |||||||| || | ||||||||||| ||||    
T  43978556 caaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacagcaat 43978474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 176 - 284
Target Start/End: Complemental strand, 10620051 - 10619942
Alignment:
Q  176 tttcctcggcagttaactggcgccggtttcacaaaatt-tcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaa 274  Q
    ||||||||||||||||||| ||||| ||||  ||||   |||||||   |||||||||||  ||||  ||| |||||||||||| ||||||||||| | |    
T  10620051 tttcctcggcagttaactgccgccgatttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaaca 10619952  T
Q  275 tgtgggaaca 284  Q
    ||||||||||    
T  10619951 tgtgggaaca 10619942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 208 - 293
Target Start/End: Complemental strand, 33416149 - 33416064
Alignment:
Q  208 aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||| |||||||||| |||||||||||  |||||||||| ||||||||||    ||||||||||||| |||  |||| ||||||||    
T  33416149 aaaacttcggtagttaactgccgaagggtatttgagtaaattactcgtgtttttcagccaaaccaaacgtgtaaacagcaattctc 33416064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 3940710 - 3940742
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaactg 194  Q
    |||||||||||||||||||||||||||||||||    
T  3940710 tggttatgttcagttttcctcggcagttaactg 3940742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 293
Target Start/End: Complemental strand, 4286109 - 4286029
Alignment:
Q  213 ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    ||||| |||| |||||||| ||  |||||||||||||||||||||  | ||||||||| | |||||  |||||||||||||    
T  4286109 ttcggcagttaactgccgatgggtatttgagtaatttactcgtgtttctcagccaaacaacatgtgtcaacaacaattctc 4286029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 15831219 - 15831187
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaactg 194  Q
    |||||||||||||||||||||||||||||||||    
T  15831219 tggttatgttcagttttcctcggcagttaactg 15831187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 20937990 - 20937958
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaactg 194  Q
    |||||||||||||||||||||||||||||||||    
T  20937990 tggttatgttcagttttcctcggcagttaactg 20937958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 253
Target Start/End: Original strand, 29407905 - 29407985
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactc 253  Q
    |||||||||||  |||||||||  |||||||    |||||||||  |||| |||||||| |||||||||||||||||||||    
T  29407905 agttttcctcgttagttaactgcagccggttctttaaaatttcgacagttaactgccgagggacatttgagtaatttactc 29407985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 233
Target Start/End: Complemental strand, 43982253 - 43982193
Alignment:
Q  174 gttttcctcggcagttaactggcgccgg-tttcacaaaatttcggtagtttactgccgaag 233  Q
    |||||||||||||||||||||  ||||| ||| | ||||||||||||||| ||||||||||    
T  43982253 gttttcctcggcagttaactgcagccggatttgagaaaatttcggtagttaactgccgaag 43982193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 293
Target Start/End: Complemental strand, 5351984 - 5351897
Alignment:
Q  207 caaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagc-caaaccaaatgtgggaacaacaattctc 293  Q
    ||||| ||||| |||| ||||| ||||| |||||  ||| |||||||||||| |||||| || || | ||||||||||||||||||||    
T  5351984 caaaacttcggcagttaactgcagaagggcattttggtattttactcgtgtggcacagcgcatactatatgtgggaacaacaattctc 5351897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 193
Target Start/End: Complemental strand, 5352056 - 5352025
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaact 193  Q
    ||||||||||||||||||||||||||||||||    
T  5352056 tggttatgttcagttttcctcggcagttaact 5352025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 293
Target Start/End: Original strand, 20951105 - 20951184
Alignment:
Q  214 tcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||| |||| ||||||||||| |||||  |||||||||| ||||| |||||||  | || ||||||||||| ||||||||    
T  20951105 tcggcagttaactgccgaagggcatttaggtaatttactggtgtggcacagccttatcacatgtgggaacagcaattctc 20951184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 29600815 - 29600698
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||||||| |||||||||  ||||||| || ||   ||||| |||| |||| ||| || ||||| ||||| ||||| |||||||||||||||  ||    
T  29600815 agttttcctcggtagttaactgcagccggttccataa---ttcggcagttaactgtcgaggggcattttagtaaattactggtgtgacacagccaatgca 29600719  T
Q  273 aatgtgggaacaacaattctc 293  Q
     |||||  |||| ||||||||    
T  29600718 tatgtgtaaacagcaattctc 29600698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 257
Target Start/End: Complemental strand, 30802095 - 30802014
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgt 257  Q
    ||||||||||||||||||||||  |||||||||| ||   ||||| |||| |||||||| || |||||| |||| ||||| ||||    
T  30802095 agttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgaggggcatttgggtaaattactagtgt 30802014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 298
Target Start/End: Complemental strand, 38945752 - 38945691
Alignment:
Q  237 atttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctcttata 298  Q
    ||||| |||| ||||||||||| |||||||| || | ||||||||||| |||||||| ||||    
T  38945752 atttgcgtaaattactcgtgtggcacagccatactatatgtgggaacagcaattctcgtata 38945691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 289
Target Start/End: Original strand, 43984404 - 43984469
Alignment:
Q  224 actgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaat 289  Q
    |||||||| ||||||||  ||| ||||||| |||| ||||||||||| | ||||||||||| ||||    
T  43984404 actgccgagggacattttggtattttactcatgtggcacagccaaactatatgtgggaacagcaat 43984469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 233
Target Start/End: Complemental strand, 17424186 - 17424126
Alignment:
Q  174 gttttcctcggcagttaactggcgccgg-tttcacaaaatttcggtagtttactgccgaag 233  Q
    |||||||||||||||||||||  ||||| |||  ||||||||||| |||| ||||||||||    
T  17424186 gttttcctcggcagttaactgcagccggattttccaaaatttcggcagttaactgccgaag 17424126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 30496930 - 30496962
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaactg 194  Q
    ||||||||||||||||||||||| |||||||||    
T  30496930 tggttatgttcagttttcctcggtagttaactg 30496962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 294
Target Start/End: Original strand, 40221149 - 40221269
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaa 273  Q
    ||||||||||| |||||||||  |||||| ||   | | ||||| |||| |||||||| ||| |||| ||||||||||||||||  | ||||||||  |     
T  40221149 gttttcctcggtagttaactgcagccggtgtctttagaattcggcagttaactgccgagggatatttaagtaatttactcgtgtatctcagccaaagaac 40221248  T
Q  274 atgtgggaacaacaattctct 294  Q
    |||||  |||| |||||||||    
T  40221249 atgtgtcaacagcaattctct 40221269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 124; Significance: 1e-63; HSPs: 109)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 62 - 295
Target Start/End: Complemental strand, 3975899 - 3975664
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagttttggaaaatggggaactct-gttctgtgat 160  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| || ||| |||||||||||||||||||||||||||||| ||| |||||| | |    
T  3975899 ttgatttgcttgcaattcgtgaaagaagatttggtgaagattggagaaaatttgtgaattttgtgaagttttggaaaatggggaagtctagttctgcgtt 3975800  T
Q  161 ttggttatgttcagttttcctcggcagttaactggcgccggttt-cacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtga 259  Q
     |||||  |||||| ||||||||||||||||||| ||||||||| |  |||| ||||  |||||||||||||||| |||||  ||||  ||||||||||     
T  3975799 ctggtttagttcagatttcctcggcagttaactgccgccggtttactaaaaacttcgacagtttactgccgaagggcattttcgtaaagtactcgtgtgg 3975700  T
Q  260 cacagccaaaccaaatgtgggaacaacaattctctt 295  Q
    ||||||||||||||||||||| ||||||||||||||    
T  3975699 cacagccaaaccaaatgtgggtacaacaattctctt 3975664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 2647933 - 2647816
Alignment:
Q  19 gtctagtcaaacctgaacactactatataatataagtgtgtcgttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgaga 118  Q
    ||||||||||||||  |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  2647933 gtctagtcaaacctacacactactatataatataagtgtcccgttgatttgcttgcaattcgtgaaagaagatttggcgaagattggagagaaattgaga 2647834  T
Q  119 attttgtgaagttttgga 136  Q
    ||||||||||||||||||    
T  2647833 attttgtgaagttttgga 2647816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 61 - 193
Target Start/End: Complemental strand, 42165357 - 42165224
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagttttggaaaatggggaactct-gttctgtga 159  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||| || ||| |||||||||||||||||||||||||||||| ||| |||||| |     
T  42165357 gttgatttgcttgcaattcgtgaaagaatatttggtgaagattggagaaaatttgtgaattttgtgaagttttggaaaatggggaagtctggttctgcgt 42165258  T
Q  160 tttggttatgttcagttttcctcggcagttaact 193  Q
    | |||||  |||||| ||||||||||||||||||    
T  42165257 tctggtttagttcagatttcctcggcagttaact 42165224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 61 - 193
Target Start/End: Original strand, 4008202 - 4008335
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagttttggaaaatggggaactct-gttctgtga 159  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||| || ||| |||||||||||||||||||||||| ||||| ||| |||||| |     
T  4008202 gttgatttgcttgctattcgtgaaagaagatttggtgaagattggagaaaatttgtgaattttgtgaagttttggaaaatcgggaagtctggttctgcgt 4008301  T
Q  160 tttggttatgttcagttttcctcggcagttaact 193  Q
    | |||||  |||||| ||||||||||||||||||    
T  4008302 tctggtttagttcagatttcctcggcagttaact 4008335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 173 - 294
Target Start/End: Original strand, 34543154 - 34543275
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  ||||  ||   |||| ||||| |||| |||||||| ||||||||||||||||||||| |||| |||||||||||||    
T  34543154 agttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgagggacatttgagtaatttactcatgtggcacagccaaacca 34543253  T
Q  273 aatgtgggaacaacaattctct 294  Q
    ||||||||||||||||||||||    
T  34543254 aatgtgggaacaacaattctct 34543275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 62 - 231
Target Start/End: Complemental strand, 596952 - 596781
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagttttggaaaatggggaa-ctct-gttctgtga 159  Q
    ||||||||||||||||||||||||   |||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||  ||| |||||| |     
T  596952 ttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagaaaaattgtgaattttgtgaagttttggaaaatggggaagttctggttctgcgt 596853  T
Q  160 tttggttatgttcagttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccga 231  Q
    | |||||  |||||| |||||||||||||||||||  ||||  || |||||| ||||| |||| | ||||||    
T  596852 tctggtttagttcagatttcctcggcagttaactgcagccgaatttacaaaacttcggcagttaattgccga 596781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 50998699 - 50998818
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaa 273  Q
    |||||| ||||||||||||||  ||||| || | |||| ||||| |||| |||||||| || ||||||||||||||||||||||| ||||||||||||||    
T  50998699 gttttcttcggcagttaactgcagccggatttataaaacttcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaaccaa 50998798  T
Q  274 atgtgggaacaacaattctc 293  Q
    ||| ||||||||||||||||    
T  50998799 atgcgggaacaacaattctc 50998818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 162 - 293
Target Start/End: Complemental strand, 1835216 - 1835084
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgac 260  Q
    |||||||||| |||||||||||||||||||||| ||||||||||  ||||  ||||| |||||||| ||||||| |||||  |||| ||||||||||| |    
T  1835216 tggttatgttgagttttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtaacttactcgtgtggc 1835117  T
Q  261 acagccaaaccaaatgtgggaacaacaattctc 293  Q
    ||||||| |||| ||||||||||| ||||||||    
T  1835116 acagccataccatatgtgggaacagcaattctc 1835084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 27739585 - 27739705
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  ||||  ||   |||| ||||| |||| |||||||||||  |||||||||||||||||||||| |||||||||||||    
T  27739585 agttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaagggtatttgagtaatttactcgtgtggcacagccaaacca 27739684  T
Q  273 aatgtgggaacaacaattctc 293  Q
    || ||||||||||||||||||    
T  27739685 aaagtgggaacaacaattctc 27739705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 295
Target Start/End: Original strand, 4008342 - 4008463
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaa 273  Q
    ||||| |||| |||||||||| |||||||||   |||||||||| |||||||||||||||| |||||  ||||  |||||||||| ||| ||||||||||    
T  4008342 gtttttctcgacagttaactgccgccggtttactaaaatttcggcagtttactgccgaagggcatttttgtaaaatactcgtgtggcacggccaaaccaa 4008441  T
Q  274 atgtgggaacaacaattctctt 295  Q
    ||||||||||| ||||||||||    
T  4008442 atgtgggaacagcaattctctt 4008463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 11095105 - 11095222
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  | |||||||| ||   ||||| || | |||||||| || ||||||||||||||||||||||| || ||||||||||    
T  11095105 agttttcctcggcagttaactgcagtcggtttcataa---ttcggcagctaactgccgaggggcatttgagtaatttactcgtgtggcatagccaaacca 11095201  T
Q  273 aatgtgggaacaacaattctc 293  Q
    || ||||||||||||||||||    
T  11095202 aacgtgggaacaacaattctc 11095222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 173 - 294
Target Start/End: Complemental strand, 12897879 - 12897758
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  ||||  ||   |||| ||||| |||| ||||| || ||  |||||||||||||||||||||| |||||||||||||    
T  12897879 agttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgctgaggggtatttgagtaatttactcgtgtggcacagccaaacca 12897780  T
Q  273 aatgtgggaacaacaattctct 294  Q
    || |||||||||||||||||||    
T  12897779 aaagtgggaacaacaattctct 12897758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 174 - 285
Target Start/End: Complemental strand, 2645510 - 2645398
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||||||| |||||||| ||||||||||  ||||  ||||| |||| |||||||| ||||||||| |||||||||| ||||| || ||||||||||    
T  2645510 gttttcctcggctgttaactgccgccggtttcctaaaaacttcggcagttaactgccgagggacatttgtgtaatttacttgtgtggcatagccaaacca 2645411  T
Q  273 aatgtgggaacaa 285  Q
    |||||||||||||    
T  2645410 aatgtgggaacaa 2645398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 208 - 296
Target Start/End: Complemental strand, 19988479 - 19988391
Alignment:
Q  208 aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctctta 296  Q
    |||| ||||| |||| |||||||| || ||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||    
T  19988479 aaaacttcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaaccaaatgtgagaacagcaattctctta 19988391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 175 - 294
Target Start/End: Complemental strand, 4002793 - 4002674
Alignment:
Q  175 ttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaa 274  Q
    ||||||||||||||||||||  ||||| ||   |||| ||||| | || | |||||| || |||||||| |||||||||||||| |||||||||||||||    
T  4002793 ttttcctcggcagttaactgcagccggatttctaaaacttcggcaattaaatgccgaggggcatttgagcaatttactcgtgtggcacagccaaaccaaa 4002694  T
Q  275 tgtgggaacaacaattctct 294  Q
    |||||||||||||| |||||    
T  4002693 tgtgggaacaacaactctct 4002674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 16851178 - 16851061
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||||||||||||||||   |||| ||||| ||   ||||| |||| |||||||| || ||||||||||| ||||||||||| || |||||||| |    
T  16851178 agttttcctcggcagttaactacagccgatttcataa---ttcggcagttaactgccgaggggcatttgagtaaattactcgtgtggcatagccaaacta 16851082  T
Q  273 aatgtgggaacaacaattctc 293  Q
    |||||||||||||||||||||    
T  16851081 aatgtgggaacaacaattctc 16851061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 27738660 - 27738543
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  ||||||| || ||   ||||| |||| ||||||||||| |||||| |||| ||||||||||  || || |||||||    
T  27738660 agttttcctcggcagttaactgcagccggttgcataa---ttcggcagttaactgccgaagggcatttgggtaaattactcgtgtagcatagtcaaacca 27738564  T
Q  273 aatgtgggaacaacaattctc 293  Q
    |||||||||||||||||||||    
T  27738563 aatgtgggaacaacaattctc 27738543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 162 - 293
Target Start/End: Complemental strand, 29008952 - 29008820
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaactggcgccggtttcacaa--aatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtga 259  Q
    ||||||||||||||||||||||| ||| | ||| |||||||| ||| |  || |||||||||| ||||||||||| |||||  ||| ||||||||||||     
T  29008952 tggttatgttcagttttcctcggtagtaagctgccgccggtt-cactacaaacttcggtagttaactgccgaagggcattttcgtattttactcgtgtgg 29008854  T
Q  260 cacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||||||| || | ||||||||||||||||||||    
T  29008853 cacagccatactatatgtgggaacaacaattctc 29008820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 173 - 296
Target Start/End: Complemental strand, 11248609 - 11248489
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  |||||||||| ||   ||||  |||| |||||||| |  ||||||| |||||||||||| || || ||||||||||    
T  11248609 agttttcctcggcagttaactgcagccggtttcataa---ttcgacagttaactgccgaggagcatttgaataatttactcgtatggcatagccaaacca 11248513  T
Q  273 aatgtgggaacaacaattctctta 296  Q
    |||||||||||| |||||||||||    
T  11248512 aatgtgggaacatcaattctctta 11248489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 174 - 293
Target Start/End: Complemental strand, 3493643 - 3493523
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||| ||| ||||||||||| ||||||||||  ||||  ||||| |||| |||| ||| | |||||| ||||||||||||||||| ||||||||||| |    
T  3493643 gtttttctctgcagttaactgccgccggtttcttaaaaacttcggcagttaactgtcgaggaacatttaagtaatttactcgtgtggcacagccaaacta 3493544  T
Q  273 aatgtgggaacaacaattctc 293  Q
    |||||||||| ||||||||||    
T  3493543 aatgtgggaagaacaattctc 3493523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 174 - 293
Target Start/End: Complemental strand, 3497337 - 3497217
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||| ||| ||||||||||| ||||||||||  ||||  ||||| |||| |||| ||| | |||||| ||||||||||||||||| ||||||||||| |    
T  3497337 gtttttctctgcagttaactgccgccggtttcttaaaaacttcggcagttaactgtcgaggaacatttaagtaatttactcgtgtggcacagccaaacta 3497238  T
Q  273 aatgtgggaacaacaattctc 293  Q
    |||||||||| ||||||||||    
T  3497237 aatgtgggaagaacaattctc 3497217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 173 - 299
Target Start/End: Original strand, 12898708 - 12898831
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||||||||| |||||||  |||||||||| ||   ||||| |||| |||| ||| || |||||| |||| ||||||||||| || ||||||||||    
T  12898708 agttttcctcggcaattaactgcagccggtttcataa---ttcggcagttaactgtcgaggggcatttgggtaaattactcgtgtggcatagccaaacca 12898804  T
Q  273 aatgtgggaacaacaattctcttatat 299  Q
    |||||||||||| |||||||| |||||    
T  12898805 aatgtgggaacagcaattctcctatat 12898831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 28817019 - 28817139
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  ||||  ||   |||| || || |||| |||||||| ||  |||||||||||||||||||||| |||||||||||||    
T  28817019 agttttcctcggcagttaactgcagccgtatttctaaaactttggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagccaaacca 28817118  T
Q  273 aatgtgggaacaacaattctc 293  Q
    || ||||||||| ||||||||    
T  28817119 aaagtgggaacatcaattctc 28817139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 3501914 - 3502037
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||||  ||||  ||||||||   ||||||||||| || ||  ||| |||||||||||| |||| |||||| |    
T  3501914 gttttcctcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcagtttcgtattttactcgtgtggcacaaccaaacaa 3502013  T
Q  273 aatgtgggaacaacaattctctta 296  Q
     |||||||||||||||||||||||    
T  3502014 catgtgggaacaacaattctctta 3502037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 34048935 - 34049022
Alignment:
Q  43 atataatataagtgtgtcgttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagt 130  Q
    |||||||||||||||  |||||||||||| |||||||||||||||||| |||| ||||||  ||||||| ||||||| ||||||||||    
T  34048935 atataatataagtgtcccgttgatttgctcgcaattcgtgaaagaagaattggcgaagatttgagagaacttgagaactttgtgaagt 34049022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 46402237 - 46402324
Alignment:
Q  43 atataatataagtgtgtcgttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagt 130  Q
    |||||||||||||||  |||||||||||| |||||||||||||||||| |||| ||||||  ||||||| ||||||| ||||||||||    
T  46402237 atataatataagtgtcccgttgatttgctcgcaattcgtgaaagaagaattggcgaagatttgagagaacttgagaactttgtgaagt 46402324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 236 - 294
Target Start/End: Complemental strand, 2267022 - 2266964
Alignment:
Q  236 catttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctct 294  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  2267022 catttgagtaatttactcgtgtgacacggccaaaccaaatgtgggaacatcaattctct 2266964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 26245387 - 26245270
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||| ||||| |||||||||  |||||||||| ||   ||||| |||| |||||||| ||  |||||||||||||||||||||| |||||||| | ||    
T  26245387 agtttttctcggaagttaactgcagccggtttcataa---ttcggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagccatatca 26245291  T
Q  273 aatgtgggaacaacaattctc 293  Q
    || ||||||||||||||||||    
T  26245290 aaagtgggaacaacaattctc 26245270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 43 - 129
Target Start/End: Original strand, 54389658 - 54389744
Alignment:
Q  43 atataatataagtgtgtcgttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaag 129  Q
    |||||||||||||||  |||||||||||| |||||||||||||||||| |||| ||||||  ||||||| ||||||| |||||||||    
T  54389658 atataatataagtgtcccgttgatttgctcgcaattcgtgaaagaagaattggcgaagatttgagagaacttgagaactttgtgaag 54389744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 162 - 293
Target Start/End: Complemental strand, 35743485 - 35743352
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaactggcgccggttt-cacaaaatttcggtagtttactgccgaa-ggacatttgagtaatttactcgtgtga 259  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |  |||| ||||| | |||||| ||||| || |||||  |||| |||||||||||     
T  35743485 tggttatgttcagttttcctcggcagttaactgccgccggtttcctaaaaacttcggcaatttactaccgaaggggcatttccgtaacttactcgtgtgg 35743386  T
Q  260 cacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||||||| || | |||| | |||||||||||||    
T  35743385 cacagccatactatatgtagcaacaacaattctc 35743352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 181 - 293
Target Start/End: Complemental strand, 42900224 - 42900111
Alignment:
Q  181 tcggcagttaactggcgccggttt-cacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgg 279  Q
    |||||||||||||| ||||||||| | ||||| ||| | |||| ||||||||||| |||||  ||| |||||||||||| ||||||||||| | ||||||    
T  42900224 tcggcagttaactgccgccggtttactcaaaacttcagcagttaactgccgaagggcattttggtattttactcgtgtggcacagccaaacaacatgtgg 42900125  T
Q  280 gaacaacaattctc 293  Q
    ||||||||| ||||    
T  42900124 gaacaacaactctc 42900111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 173 - 297
Target Start/End: Complemental strand, 32592272 - 32592148
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  | | |||    |||||||||  || | |||||||| |||||||||||||||||||||||||  | |||||||||||    
T  32592272 agttttcctcggcagttaactgcagtcagttctttaaaatttcgacagctaactgccgagggacatttgagtaatttactcgtgtttctcagccaaacca 32592173  T
Q  273 aatgtgggaacaacaattctcttat 297  Q
    ||||||  ||||||||| |||||||    
T  32592172 aatgtgtcaacaacaatactcttat 32592148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 162 - 293
Target Start/End: Complemental strand, 34045474 - 34045342
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaactggcgccggttt-cacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgac 260  Q
    |||||||| |||||||||||||| ||||  ||| ||||||||  | ||||| ||||| |||| ||||||||||| |||||  ||| |||||||||||| |    
T  34045474 tggttatgatcagttttcctcggtagtttgctgccgccggttcactcaaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggc 34045375  T
Q  261 acagccaaaccaaatgtgggaacaacaattctc 293  Q
    ||||||| || | ||||||||||| ||||||||    
T  34045374 acagccatactatatgtgggaacagcaattctc 34045342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 41844383 - 41844503
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||||  ||||  ||||| | |||||| ||||| | |||||  |||| ||||||||||| |||||||| ||||    
T  41844383 gttttcctcggcagttaactgccgccggtttcctaaaaacttcggcaatttactaccgaaaggcatttccgtaacttactcgtgtggcacagccatacca 41844482  T
Q  273 aatgtgggaacaacaattctc 293  Q
     |||| |||||||||||||||    
T  41844483 tatgtaggaacaacaattctc 41844503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 174 - 293
Target Start/End: Complemental strand, 46697765 - 46697645
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| |||||||| |  ||||  ||||||||   ||||||||||| |||||  ||| |||||||||||| ||||||||||| |    
T  46697765 gttttcctcggcagttaactgccgccggttgcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccaaacaa 46697666  T
Q  273 aatgtgggaacaacaattctc 293  Q
     ||||||||||| ||||||||    
T  46697665 gatgtgggaacagcaattctc 46697645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 49144475 - 49144595
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcac-aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||| |||||||||||||| ||||||||||   |||| ||||||||   ||||||||||| |||||  ||| ||||||||||||||||||||| || |    
T  49144475 gttttcttcggcagttaactgccgccggtttccttaaaacttcggtagcaaactgccgaagggcattttggtattttactcgtgtgacacagccatacta 49144574  T
Q  273 aatgtgggaacaacaattctc 293  Q
     ||||||||||| ||||||||    
T  49144575 tatgtgggaacagcaattctc 49144595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 173 - 296
Target Start/End: Complemental strand, 7941165 - 7941042
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||||| |||||||||||  |||||||    |||||||||| |||| |||||||||||  ||||  |||| ||||||||||  | |||||||||||    
T  7941165 agttttcctcagcagttaactgcagccggttctttaaaatttcggcagttaactgccgaagggtatttaggtaaattactcgtgtttctcagccaaacca 7941066  T
Q  273 aatgtgggaacaacaattctctta 296  Q
    |||||| |||||||||| ||||||    
T  7941065 aatgtgtgaacaacaatactctta 7941042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 35743601 - 35743719
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaa 273  Q
    ||||||||||||||||||||| ||||| |||| | ||| ||||||||   ||||||||| | |||||  ||| |||||||||||| ||||||||||| |     
T  35743601 gttttcctcggcagttaactgccgccgatttc-ctaaacttcggtagcaaactgccgaatggcattttcgtattttactcgtgtggcacagccaaacaac 35743699  T
Q  274 atgtgggaacaacaattctc 293  Q
    ||||||||||| ||||||||    
T  35743700 atgtgggaacagcaattctc 35743719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 49141061 - 49140978
Alignment:
Q  47 aatataagtgtgtcgttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagt 130  Q
    |||||||||||  |||||||||||| |||||||||||||||||| |||| ||||||  ||||||| ||||||| ||||||||||    
T  49141061 aatataagtgtcccgttgatttgctcgcaattcgtgaaagaagaattggcgaagatttgagagaacttgagaactttgtgaagt 49140978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 2857979 - 2858095
Alignment:
Q  178 tcctcggcagttaactggcgccggtttcacaaaat--ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaat 275  Q
    ||||||||||||||||| ||||||||| || ||||  ||||||||   ||||||||||| | |||  ||| |||||||||||| ||||||||||| | ||    
T  2857979 tcctcggcagttaactgccgccggttt-actaaatacttcggtagcaaactgccgaagggcgttttcgtattttactcgtgtggcacagccaaacaacat 2858077  T
Q  276 gtgggaacaacaattctc 293  Q
    ||||||||||||||||||    
T  2858078 gtgggaacaacaattctc 2858095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 219 - 293
Target Start/End: Original strand, 19750077 - 19750151
Alignment:
Q  219 agtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||| |||||||| ||  |||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||    
T  19750077 agttaactgccgaggggtatttgagtaatttactcgcgtggcacagccaaaccaaaagtgggaacaacaattctc 19750151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 19842559 - 19842437
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||||| |||||||||||  |||| ||    |||||||||| |||| ||||||||||| ||||||| ||||||||| ||||  | ||| |||||||    
T  19842559 agttttcctcagcagttaactgcagccgattctttaaaatttcggcagttaactgccgaagggcatttgaataatttacttgtgtttctcagacaaacca 19842460  T
Q  273 aatgtgggaacaacaattctctt 295  Q
    |||||| ||||| ||||||||||    
T  19842459 aatgtgtgaacagcaattctctt 19842437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 50963147 - 50963085
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    ||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||    
T  50963147 ttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgagaattttg 50963085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 174 - 294
Target Start/End: Complemental strand, 41844203 - 41844082
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||| ||||||||||| ||||||||||  ||||  ||||||||   ||||||||||| |||||  ||| |||||||||||| ||||||||||| |    
T  41844203 gttttcctcagcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcatttttgtattttactcgtgtggcacagccaaacaa 41844104  T
Q  273 aatgtgggaacaacaattctct 294  Q
     ||||||||| | |||||||||    
T  41844103 catgtgggaagagcaattctct 41844082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 11249542 - 11249662
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  |||   ||   |||| ||| | |||| |||||||||||  |||||||||||||||||||||| ||||||||||  |    
T  11249542 agttttcctcggcagttaactgcagccatatttctaaaacttcagcagttaactgccgaagggtatttgagtaatttactcgtgtggcacagccaaagta 11249641  T
Q  273 aatgtgggaacaacaattctc 293  Q
    || ||||||||| ||||||||    
T  11249642 aaagtgggaacagcaattctc 11249662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 293
Target Start/End: Original strand, 46406651 - 46406763
Alignment:
Q  181 tcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtggg 280  Q
    |||||||||||||| |||||||| |  ||||  |||||||   |||||||| || |||||  ||| |||||||||||||||||||||||| | |||||||    
T  46406651 tcggcagttaactgccgccggttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgtgacacagccaaactatatgtggg 46406750  T
Q  281 aacaacaattctc 293  Q
    |||| ||||||||    
T  46406751 aacagcaattctc 46406763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 50216759 - 50216822
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    |||||||||||||||||||||||||   |||||||||||||| |||||||||||| ||||||||    
T  50216759 gttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgtgaattttg 50216822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 207 - 297
Target Start/End: Complemental strand, 46388978 - 46388888
Alignment:
Q  207 caaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctcttat 297  Q
    ||||| ||||| |||| ||||||||||| |||||  ||| |||||||||||| |||||||| || | ||||||||||| ||||||||||||    
T  46388978 caaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacagcaattctcttat 46388888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 8475880 - 8475791
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacaca 263  Q
    ||||||||||||||||||||| |||||||||   |||| ||||| |||| |||||||||||||||||  ||||  |||||||||| ||||    
T  8475880 gttttcctcggcagttaactgccgccggtttactaaaacttcggcagttaactgccgaaggacattttcgtaaagtactcgtgtggcaca 8475791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 294
Target Start/End: Complemental strand, 10492082 - 10491961
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||| ||||||||||  ||||  ||   |||| ||||  |||| ||| |||| ||||||||||||||||||||| | || |||||||||| ||    
T  10492082 agttttcctcgtcagttaactgcagccgtatttctaaaacttcgacagttaactaccgatggacatttgagtaatttactcatatggcacagccaaatca 10491983  T
Q  273 aatgtgggaacaacaattctct 294  Q
    || ||||||||| |||||||||    
T  10491982 aacgtgggaacatcaattctct 10491961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 298
Target Start/End: Original strand, 14043916 - 14044041
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  |||| |||   |||| ||||  |||| |||||||||||  ||||| |||| ||||||||||  | ||||||||| |    
T  14043916 agttttcctcggcagttaactgcagccgattttctaaaacttcgacagttaactgccgaagggtatttgggtaaattactcgtgtttctcagccaaacta 14044015  T
Q  273 aatgtgggaacaacaattctcttata 298  Q
    ||||||  ||||||||||||| ||||    
T  14044016 aatgtgtaaacaacaattctcatata 14044041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 293
Target Start/End: Complemental strand, 16611164 - 16611044
Alignment:
Q  164 gttatgttcagttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacaca 263  Q
    |||||||||||||  | |||||||||||||| |||||||||   |||| |||||||||| ||||||||||| |||||  |||| |||||         ||    
T  16611164 gttatgttcagttcgcatcggcagttaactgccgccggttttctaaaacttcggtagttaactgccgaagggcatttaggtaaattact---------ca 16611074  T
Q  264 gccaaaccaaatgtgggaacaacaattctc 293  Q
    |||||||||||||| |||||||||||||||    
T  16611073 gccaaaccaaatgtaggaacaacaattctc 16611044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 178 - 295
Target Start/End: Complemental strand, 17561809 - 17561692
Alignment:
Q  178 tcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgt 277  Q
    ||||||| |||||||||  ||||||||   |||||||||| |||| |||| | | ||||||||  |||| ||||||||||| | |||||||| |||||||    
T  17561809 tcctcgggagttaactgcagccggttttctaaaatttcggcagttaactgtcaagggacatttaggtaaattactcgtgtgtctcagccaaatcaaatgt 17561710  T
Q  278 gggaacaacaattctctt 295  Q
    |  |||||||||||||||    
T  17561709 gtcaacaacaattctctt 17561692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 20917896 - 20917957
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaatttt 123  Q
    ||||||||||||||||||||||||   | |||||||||||| ||||||||||||||||||||    
T  20917896 ttgatttgcttgcaattcgtgaaaatggctttggtgaagattggagagaaattgagaatttt 20917957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 20926858 - 20926919
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaatttt 123  Q
    ||||||||||||||||||||||||   | |||||||||||| ||||||||||||||||||||    
T  20926858 ttgatttgcttgcaattcgtgaaaatggctttggtgaagattggagagaaattgagaatttt 20926919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 293
Target Start/End: Original strand, 22048089 - 22048209
Alignment:
Q  164 gttatgttcagttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacaca 263  Q
    |||||||||||||  | |||||||||||||| |||||||||   |||| |||||||||| ||||||||||| |||||  |||| |||||         ||    
T  22048089 gttatgttcagttcgcatcggcagttaactgccgccggttttctaaaacttcggtagttaactgccgaagggcatttaggtaaattact---------ca 22048179  T
Q  264 gccaaaccaaatgtgggaacaacaattctc 293  Q
    |||||||||||||| |||||||||||||||    
T  22048180 gccaaaccaaatgtaggaacaacaattctc 22048209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 2967944 - 2968064
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcac-aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||| ||||||| |||||| ||||||||||   |||| ||||||||   ||||||||||| |||||  ||| |||||||||||| |||||||| || |    
T  2967944 gttttcttcggcagctaactgccgccggtttccttaaaacttcggtagcaaactgccgaagggcattttggtattttactcgtgtggcacagccatacta 2968043  T
Q  273 aatgtgggaacaacaattctc 293  Q
     ||||||||||| ||||||||    
T  2968044 tatgtgggaacagcaattctc 2968064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 174 - 289
Target Start/End: Original strand, 3953234 - 3953350
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatt-tcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||||  ||||   |||||||   |||||||||||  ||||  ||| |||||||||||| ||||||||||| |    
T  3953234 gttttcctcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaa 3953333  T
Q  273 aatgtgggaacaacaat 289  Q
     ||||||||||| ||||    
T  3953334 catgtgggaacagcaat 3953350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 4015148 - 4015240
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagcc 266  Q
    ||||||||||||||||||||  |||||||||   |||| ||||| |||| ||||||||||| |||||  ||||  ||||||||||||||||||    
T  4015148 gttttcctcggcagttaactcccgccggtttactaaaacttcggcagttaactgccgaagggcattttcgtaaagtactcgtgtgacacagcc 4015240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 213 - 293
Target Start/End: Complemental strand, 4330807 - 4330727
Alignment:
Q  213 ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    ||||| |||| |||||||| |  |||||||||||||||| |||||  | ||||||||||||||||||||||| ||||||||    
T  4330807 ttcggcagttaactgccgaggagcatttgagtaatttacccgtgtttcccagccaaaccaaatgtgggaacagcaattctc 4330727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 42760228 - 42760347
Alignment:
Q  174 gttttcctcggcagttaactggcgccggt-ttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||   ||||||   ||||||| |||||||||| || | |||||| |||||  |||| ||||||||||| | |||||||||||    
T  42760228 gttttcctcggcagttaactacagccggtaaccacaaaa-ttcggtagttaaccggcgaagggcatttaggtaaattactcgtgtgtctcagccaaacca 42760326  T
Q  273 aatgtgggaacaacaattctc 293  Q
    ||||||  |||||||||||||    
T  42760327 aatgtgtcaacaacaattctc 42760347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 177 - 293
Target Start/End: Complemental strand, 50330663 - 50330547
Alignment:
Q  177 ttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatg 276  Q
    ||||||||||||||||||  |||| ||    |||||||||  | || ||||||||  | ||||||||||||||||||||||    |||||||||||||||    
T  50330663 ttcctcggcagttaactgcagccgattctttaaaatttcgacaattaactgccgagaggcatttgagtaatttactcgtgtttatcagccaaaccaaatg 50330564  T
Q  277 tgggaacaacaattctc 293  Q
    || ||||||||||||||    
T  50330563 tgtgaacaacaattctc 50330547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 174 - 293
Target Start/End: Complemental strand, 50477234 - 50477114
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| |||||||| |  ||||  ||||||||   |||| |||| |||||||  ||| ||||||| |||| ||||| ||||| |    
T  50477234 gttttcctcggcagttaactgccgccggttgcctaaaaacttcggtagcaaactgtcgaatgacattttcgtattttactcatgtggcacagtcaaacaa 50477135  T
Q  273 aatgtgggaacaacaattctc 293  Q
     ||||||||||||||||||||    
T  50477134 gatgtgggaacaacaattctc 50477114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 6745345 - 6745468
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatt-tcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||| |||||||||||| ||||||||||  ||||   |||||||   |||||||||||  ||||  ||| |||||||||||| ||||||||||| |    
T  6745345 gttttccttggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaa 6745444  T
Q  273 aatgtgggaacaacaattctctta 296  Q
     ||||||||||| |||| ||||||    
T  6745445 catgtgggaacagcaatactctta 6745468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 293
Target Start/End: Complemental strand, 9426688 - 9426565
Alignment:
Q  171 tcagttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaa 269  Q
    |||| ||||||||||| ||||||| ||||||||||  ||||  ||||||||   ||||||||||| |||||  ||| ||||||||||||  ||| |||||    
T  9426688 tcagatttcctcggcatttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggtacaaccaaa 9426589  T
Q  270 ccaaatgtgggaacaacaattctc 293  Q
    | | ||||||||||| ||||||||    
T  9426588 caacatgtgggaacagcaattctc 9426565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 173 - 255
Target Start/End: Complemental strand, 6143726 - 6143644
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgt 255  Q
    ||||||||||||||||||||||  |||||||     ||||||| | | || ||||||||||||||||||||||||||||||||    
T  6143726 agttttcctcggcagttaactgcagccggttcttttaaatttcagcaattaactgccgaaggacatttgagtaatttactcgt 6143644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 294
Target Start/End: Original strand, 26494549 - 26494635
Alignment:
Q  208 aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctct 294  Q
    ||||||| || |||| |||| ||| | |||||||||||||||||||||||  | ||||||||||||||||   ||||||||||||||    
T  26494549 aaaattttggcagttaactgtcgatgaacatttgagtaatttactcgtgtttctcagccaaaccaaatgtatcaacaacaattctct 26494635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 32743258 - 32743160
Alignment:
Q  177 ttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaat 275  Q
    ||||||||||||||||||  || ||||    |||||||||| | || |||||||| ||||||||||||||||||| |||||  | ||||||||||||||    
T  32743258 ttcctcggcagttaactgcagctggttctttaaaatttcggcaattaactgccgatggacatttgagtaatttacccgtgtttctcagccaaaccaaat 32743160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 61 - 123
Target Start/End: Original strand, 42807510 - 42807572
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaatttt 123  Q
    |||||||||||||||||| ||||||   | |||||||||||| ||||||||||||||||||||    
T  42807510 gttgatttgcttgcaatttgtgaaaatggctttggtgaagattggagagaaattgagaatttt 42807572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 175 - 289
Target Start/End: Original strand, 45076270 - 45076384
Alignment:
Q  175 ttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaa 274  Q
    |||| ||||||||||||||   |||||||    |||||||||| |||| |||||||||||| ||||| |||| |||||||| |  | |||||||||||||    
T  45076270 tttttctcggcagttaactacagccggttctttaaaatttcggcagttaactgccgaaggatatttgggtaaattactcgtatttctcagccaaaccaaa 45076369  T
Q  275 tgtgggaacaacaat 289  Q
     ||| ||||||||||    
T  45076370 agtgtgaacaacaat 45076384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 61 - 138
Target Start/End: Complemental strand, 51807163 - 51807085
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaatttt-gtgaagttttggaaa 138  Q
    |||||||||||||||||| ||||||  |  |||||||||||| |||||||||||| ||||||| | |||||||||||||    
T  51807163 gttgatttgcttgcaatttgtgaaaataactttggtgaagattggagagaaattgtgaattttggagaagttttggaaa 51807085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 266
Target Start/End: Original strand, 4331838 - 4331931
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagcc 266  Q
    |||||||||| ||||||||||| |||||||||   |||| ||||| |||| |||||||||||| ||||  ||||  |||||||||| |||||||    
T  4331838 agttttcctcagcagttaactgccgccggtttactaaaacttcggcagttaactgccgaaggatattttcgtaaagtactcgtgtggcacagcc 4331931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 181 - 294
Target Start/End: Original strand, 34051373 - 34051486
Alignment:
Q  181 tcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtggg 280  Q
    ||||||||||||||  ||||||| |  ||||  |||||||   |||||||| || |||||  ||| |||||||||||| ||||||||||| | |||||||    
T  34051373 tcggcagttaactgctgccggttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgtggcacagccaaactatatgtggg 34051472  T
Q  281 aacaacaattctct 294  Q
    |||| |||||||||    
T  34051473 aacagcaattctct 34051486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 293
Target Start/End: Complemental strand, 2950379 - 2950267
Alignment:
Q  181 tcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtggg 280  Q
    ||||||| |||||| |||||||| |  ||||  |||||||   |||||||| || |||||  ||| ||||||||||||||||| |||||| | |||||||    
T  2950379 tcggcaggtaactgccgccggttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgtgacacaaccaaactatatgtggg 2950280  T
Q  281 aacaacaattctc 293  Q
    |||| ||||||||    
T  2950279 aacagcaattctc 2950267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 3501774 - 3501834
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattt 122  Q
    ||||||||||||||||||||||||   |||||||||||||| | | |||||||||||||||    
T  3501774 ttgatttgcttgcaattcgtgaaaatggatttggtgaagattgaaaagaaattgagaattt 3501834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 277
Target Start/End: Complemental strand, 10658878 - 10658774
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||||||||||||| |||  |||||||     ||||||||| |||| || |||||||||||||||  |||||||||| |||  | |||||||||||    
T  10658878 agttttcctcggcagttagctgcagccggttcttttaaatttcggcagttaacagccgaaggacatttgcataatttactcatgtttctcagccaaacca 10658779  T
Q  273 aatgt 277  Q
    |||||    
T  10658778 aatgt 10658774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 214 - 294
Target Start/End: Original strand, 16852089 - 16852164
Alignment:
Q  214 tcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctct 294  Q
    |||| |||| |||||||||||  |||||||||||     |||||| ||||||||||||||| |||||||||||||||||||    
T  16852089 tcggcagttaactgccgaagggtatttgagtaat-----cgtgtggcacagccaaaccaaaagtgggaacaacaattctct 16852164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 294
Target Start/End: Complemental strand, 42165217 - 42165097
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaa 273  Q
    ||||||||||||| ||||||| |||||||||   |||| ||| | || | ||||||||||| |||||  ||||  |||||||||| |||||||  | |||    
T  42165217 gttttcctcggcaattaactgccgccggtttactaaaacttcagcagctaactgccgaagggcattttcgtaaaatactcgtgtggcacagccttatcaa 42165118  T
Q  274 atgtgggaacaacaattctct 294  Q
    |||||  ||||||||||||||    
T  42165117 atgtgtaaacaacaattctct 42165097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 295
Target Start/End: Original strand, 42904205 - 42904323
Alignment:
Q  178 tcctcggcagttaactggcgccggtttcac--aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaat 275  Q
    ||||||| ||||| ||| |||||||| |||  |||| ||||| |||| ||||||||||| |||||  ||| |||||| ||||| |||||||| || | ||    
T  42904205 tcctcgggagttagctgccgccggtt-cactaaaaacttcggcagttaactgccgaagggcattttcgtattttactggtgtggcacagccatactatat 42904303  T
Q  276 gtgggaacaacaattctctt 295  Q
    ||||||||| ||||||||||    
T  42904304 gtgggaacagcaattctctt 42904323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 293
Target Start/End: Complemental strand, 49138627 - 49138515
Alignment:
Q  181 tcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtggg 280  Q
    |||||||||||||| |||||||| |  ||||  |||||||   |||||||| || |||||  ||| ||||||| |||| ||||||||||| | |||||||    
T  49138627 tcggcagttaactgccgccggttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcatgtggcacagccaaactatatgtggg 49138528  T
Q  281 aacaacaattctc 293  Q
    |||| ||||||||    
T  49138527 aacagcaattctc 49138515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 174 - 294
Target Start/End: Original strand, 1835346 - 1835464
Alignment:
Q  174 gttttcctcggcagttaactggcgccggttt-cacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||| ||||||||||||||| ||||||||| |  |||| ||||||||   ||||||||| | |||||  ||| |||||||||||| |||| ||||||      
T  1835346 gtttttctcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaac-- 1835443  T
Q  273 aatgtgggaacaacaattctct 294  Q
     ||||||||||| |||||||||    
T  1835444 -atgtgggaacagcaattctct 1835464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 294
Target Start/End: Original strand, 21343512 - 21343630
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||||||| |||||||||  ||||||| || ||   ||||| |||| |||| ||||||||||||  |||| ||||| ||||||||||| |||  ||    
T  21343512 agttttcctcggtagttaactgcagccggttccataa---ttcggcagttaactgtcgaaggacatttcggtaaattactagtgtgacacagtcaatgca 21343608  T
Q  273 aatgtgggaacaacaattctct 294  Q
     |||||  ||||||||||||||    
T  21343609 tatgtgtcaacaacaattctct 21343630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 293
Target Start/End: Complemental strand, 16444628 - 16444542
Alignment:
Q  207 caaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    ||||| ||||| |||| ||||||||||| |||||  ||| |||||||||||| |||| ||| || | ||||||||||| ||||||||    
T  16444628 caaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacaaccatactatatgtgggaacagcaattctc 16444542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 263
Target Start/End: Original strand, 42166428 - 42166518
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacaca 263  Q
    ||||||||||||||||| |||| |||||||||   |||| ||||| |||| ||||||||| |||||||  ||||  |||||||||| ||||    
T  42166428 agttttcctcggcagtttactgccgccggtttactaaaacttcggcagttaactgccgaatgacatttttgtaaagtactcgtgtggcaca 42166518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 293
Target Start/End: Original strand, 46702078 - 46702164
Alignment:
Q  207 caaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    ||||| ||||| |||| ||||| |||||||||||  ||| |||||||||||| |||| ||| || | ||||||||||| ||||||||    
T  46702078 caaaacttcggcagttaactgctgaaggacattttggtattttactcgtgtggcacaaccatactatatgtgggaacagcaattctc 46702164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 173 - 278
Target Start/End: Original strand, 11270302 - 11270407
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||| ||||||||||||  |||||||     ||||||||| |||| |||| |||| ||||||||| ||||||||||||||  | ||||||||  |    
T  11270302 agttttccttggcagttaactgcagccggttcttttaaatttcggcagttaactgtcgaaagacatttgaataatttactcgtgtttctcagccaaatta 11270401  T
Q  273 aatgtg 278  Q
    ||||||    
T  11270402 aatgtg 11270407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 208 - 257
Target Start/End: Original strand, 24703468 - 24703517
Alignment:
Q  208 aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgt 257  Q
    |||| |||||||||| |||||||| || ||||||||||||||||||||||    
T  24703468 aaaacttcggtagttaactgccgaggggcatttgagtaatttactcgtgt 24703517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 210 - 295
Target Start/End: Complemental strand, 25191938 - 25191853
Alignment:
Q  210 aatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctctt 295  Q
    |||||||||||   ||||||||||| |||||  ||| |||||||||||| ||||||| ||| | ||||||||| | ||||||||||    
T  25191938 aatttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccgaacaacatgtgggaagagcaattctctt 25191853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 174 - 294
Target Start/End: Original strand, 54392047 - 54392168
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatt-tcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||| ||||||| ||||||| ||  ||||   |||||||   |||||||| || |||||  ||| |||||||||||| ||||||||||| |    
T  54392047 gttttcctcggcacttaactgccgccggtgtcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgtggcacagccaaacta 54392146  T
Q  273 aatgtgggaacaacaattctct 294  Q
     ||||||||||| |||| ||||    
T  54392147 tatgtgggaacagcaatactct 54392168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 295
Target Start/End: Complemental strand, 2743452 - 2743330
Alignment:
Q  174 gttttcctcggcagttaactggcgccgg-tttcacaaaatt--tcggtagtttactgccgaagg-acatttgagtaatttactcgtgtgacacagccaaa 269  Q
    |||||||||||||||||||||  ||||| |||||   ||||  |||| |||| |||||||| || | ||||| |||||||||| ||||  | ||||||||    
T  2743452 gttttcctcggcagttaactgcagccggatttca---aattcctcggcagttaactgccgaggggatatttgggtaatttacttgtgtttctcagccaaa 2743356  T
Q  270 ccaaatgtgggaacaacaattctctt 295  Q
    | | ||||||||||||||||||||||    
T  2743355 caacatgtgggaacaacaattctctt 2743330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 298
Target Start/End: Original strand, 41615851 - 41615931
Alignment:
Q  218 tagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctcttata 298  Q
    ||||| ||| |||||||  ||||  |||| ||||||||||| | |||| ||||||||||||  ||||||||||||||||||    
T  41615851 tagttaactaccgaagggaatttaggtaaattactcgtgtgtctcagctaaaccaaatgtgtcaacaacaattctcttata 41615931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 46389050 - 46389018
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaactg 194  Q
    |||||||||||||||||||||||||||||||||    
T  46389050 tggttatgttcagttttcctcggcagttaactg 46389018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 46702006 - 46702038
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaactg 194  Q
    |||||||||||||||||||||||||||||||||    
T  46702006 tggttatgttcagttttcctcggcagttaactg 46702038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 295
Target Start/End: Original strand, 20485589 - 20485676
Alignment:
Q  208 aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctctt 295  Q
    ||||||| || |||| |||||||||||  ||||| |||| ||||||||||  | ||||||||| ||||||| ||||| |||| |||||    
T  20485589 aaaattttggcagttaactgccgaagggtatttgggtaaattactcgtgtttctcagccaaactaaatgtgtgaacatcaatactctt 20485676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 134
Target Start/End: Original strand, 30255881 - 30255955
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaaga-tttggtgaagatcggagagaaattgagaa-ttttgtgaagttttg 134  Q
    ||||||||||||||||||||||||| | || |||||||||||| ||| |||| ||||||| ||||| |||||||||    
T  30255881 gttgatttgcttgcaattcgtgaaa-atgactttggtgaagattggaaagaatttgagaagttttgagaagttttg 30255955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 297
Target Start/End: Complemental strand, 41612418 - 41612299
Alignment:
Q  178 tcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgt 277  Q
    ||||||| ||||||||| ||||| |||   |||| ||||  |||| |||||| |  |||||||  |||| ||||||||||| | |||||||||| |||||    
T  41612418 tcctcggtagttaactgccgccgattttctaaaacttcgacagttaactgccaatagacatttatgtaaattactcgtgtgtctcagccaaacctaatgt 41612319  T
Q  278 gggaacaacaattctcttat 297  Q
    |  |||| ||||||||||||    
T  41612318 gtcaacatcaattctcttat 41612299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 123
Target Start/End: Original strand, 49196326 - 49196388
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaaga-tttggtgaagatcggagagaaattgagaatttt 123  Q
    |||||||| |||||||||||||||| | || ||||||||||||  |||||||||||||||||||    
T  49196326 gttgattttcttgcaattcgtgaaa-atgactttggtgaagattagagagaaattgagaatttt 49196388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 47074088 - 47074142
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattg 115  Q
    |||||||||||||| ||||||||||   |||||||||||||| | ||||||||||    
T  47074088 gttgatttgcttgctattcgtgaaaatggatttggtgaagattgaagagaaattg 47074142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 295
Target Start/End: Original strand, 1294096 - 1294217
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaa 273  Q
    ||||||||||| |||||||||  | |||||||   | | ||||| |||| |||||||| ||  ||||| |||||||||||||||  | ||| ||||| |     
T  1294096 gttttcctcggaagttaactgcagtcggtttcttcagaattcggcagttaactgccgaggggtatttgggtaatttactcgtgtttctcagtcaaacaac 1294195  T
Q  274 atgtgggaacaacaattctctt 295  Q
    |||||  |||||||||||||||    
T  1294196 atgtgtcaacaacaattctctt 1294217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 278
Target Start/End: Complemental strand, 2062441 - 2062336
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||| ||||||||||  ||| ||||   |||| ||||| |||| |||||||||||  |||||  ||| |||||||| |  | |||||||||||    
T  2062441 agttttcctcgacagttaactgcagccagttttctaaaacttcggcagttaactgccgaagggtatttggataaattactcgtatttctcagccaaacca 2062342  T
Q  273 aatgtg 278  Q
    ||||||    
T  2062341 aatgtg 2062336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 289
Target Start/End: Complemental strand, 30943192 - 30943127
Alignment:
Q  224 actgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaat 289  Q
    |||| ||||||| ||||  ||| |||||||||||| ||||||||||| | ||||||||||| ||||    
T  30943192 actgtcgaaggatattttggtattttactcgtgtggcacagccaaacaacatgtgggaacagcaat 30943127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 233
Target Start/End: Original strand, 2647718 - 2647778
Alignment:
Q  174 gttttcctcggcagttaactggcgccgg-tttcacaaaatttcggtagtttactgccgaag 233  Q
    |||||||||||||||||||||  ||||| |||  ||||||||||| |||| ||||||||||    
T  2647718 gttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccgaag 2647778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 214 - 282
Target Start/End: Original strand, 26246286 - 26246354
Alignment:
Q  214 tcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaa 282  Q
    |||| |||| |||| ||| || ||||| ||||| ||| ||||||| || ||||||||||||||||||||    
T  26246286 tcggcagttaactgtcgaggggcattttagtaaattaatcgtgtggcatagccaaaccaaatgtgggaa 26246354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 42904163 - 42904195
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaactg 194  Q
    ||||||||| |||||||||||||||||||||||    
T  42904163 tggttatgtccagttttcctcggcagttaactg 42904195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 91 - 123
Target Start/End: Complemental strand, 44227278 - 44227246
Alignment:
Q  91 tttggtgaagatcggagagaaattgagaatttt 123  Q
    |||||||||||| ||||||||||||||||||||    
T  44227278 tttggtgaagattggagagaaattgagaatttt 44227246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 124
Target Start/End: Complemental strand, 48888930 - 48888867
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaaga-tttggtgaagatcggagagaaattgagaattttg 124  Q
    ||||||||||||||||||||||||| | || |||||||||||| ||| |||| ||||||| ||||    
T  48888930 gttgatttgcttgcaattcgtgaaa-atgactttggtgaagattggaaagaatttgagaagtttg 48888867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 50481364 - 50481396
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaactg 194  Q
    ||||||||| |||||||||||||||||||||||    
T  50481364 tggttatgtccagttttcctcggcagttaactg 50481396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 51755688 - 51755620
Alignment:
Q  210 aatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtg 278  Q
    ||||| || |||| ||||| || || |||||||||||||||||||| |  | |||||||||||||||||    
T  51755688 aattttggcagttaactgctgaggggcatttgagtaatttactcgtatttctcagccaaaccaaatgtg 51755620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 233
Target Start/End: Complemental strand, 54389849 - 54389789
Alignment:
Q  174 gttttcctcggcagttaactggcgccgg-tttcacaaaatttcggtagtttactgccgaag 233  Q
    |||||||||||||||||||||  ||||| ||| | |||||||||| |||| ||||||||||    
T  54389849 gttttcctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccgaag 54389789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 2e-50; HSPs: 97)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 61 - 284
Target Start/End: Complemental strand, 43211700 - 43211475
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagttttggaaaatggggaactct-gttctgtga 159  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| || ||| |||||||||||||||||| ||||||||||| ||| |||||  |     
T  43211700 gttgatttgcttgcaattcgtgaaagaagatttggtgaagattggagaaaatttgtgaattttgtgaagttttgaaaaatggggaagtctggttctacgt 43211601  T
Q  160 tttggttatgttcagttttcctcggcagttaactggcgccggttt-cacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtg 258  Q
    | |||||  |||||| ||||||||||||||||||| || |||||| |  |||||||||| |||  ||||||||||| |||||  ||||  ||||||||||    
T  43211600 tctggtttagttcagatttcctcggcagttaactgccgtcggtttactaaaaatttcggcagtaaactgccgaagggcattttcgtaaagtactcgtgtg 43211501  T
Q  259 acacagccaaaccaaatgtgggaaca 284  Q
     ||||||| |||||||||||||||||    
T  43211500 gcacagccgaaccaaatgtgggaaca 43211475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 174 - 294
Target Start/End: Complemental strand, 15030938 - 15030817
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||||  ||||  ||||| |||||||| ||||||| ||||||||||||||||||||||| |||||||||||||    
T  15030938 gttttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttgagtaatttactcgtgtggcacagccaaacca 15030839  T
Q  273 aatgtgggaacaacaattctct 294  Q
    ||||||||||||||||||||||    
T  15030838 aatgtgggaacaacaattctct 15030817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 174 - 294
Target Start/End: Original strand, 45066380 - 45066501
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||||  ||||  ||||| |||||||| ||||||| ||||||||||||||||||||||| |||||||||||||    
T  45066380 gttttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttgagtaatttactcgtgtggcacagccaaacca 45066479  T
Q  273 aatgtgggaacaacaattctct 294  Q
    ||||||||||||||||||||||    
T  45066480 aatgtgggaacaacaattctct 45066501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 62 - 292
Target Start/End: Original strand, 15036608 - 15036840
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagttttggaaaatggggaactctg-ttctgtgat 160  Q
    ||||||||||||||||||| ||||   |||||||||||||| ||||||||||||||||||| |  |  |||| |||||||||    |||| ||||| |||    
T  15036608 ttgatttgcttgcaattcgcgaaaatggatttggtgaagattggagagaaattgagaatttagaaagttttttgaaaatgggaggttctggttctgcgat 15036707  T
Q  161 ttggttatgttcagttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtga 259  Q
     || ||| |||||| ||||||||||||||||||| ||||||||||  ||||  || || | |||||| ||||||| |||||| ||||||||||||||||     
T  15036708 ctgtttaagttcagatttcctcggcagttaactgccgccggtttcctaaaaactttggcaatttactaccgaagggcatttgcgtaatttactcgtgtgg 15036807  T
Q  260 cacagccaaaccaaatgtgggaacaacaattct 292  Q
    ||||||||||| |  ||||||||||||||||||    
T  15036808 cacagccaaactatgtgtgggaacaacaattct 15036840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 170 - 293
Target Start/End: Original strand, 32585008 - 32585128
Alignment:
Q  170 ttcagttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaa 269  Q
    |||||||||||||||||||||||||  |||||||||| ||   ||||| |||| ||| |||| |||||||||||||||||||||||||| || |||||||    
T  32585008 ttcagttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactaccgagggacatttgagtaatttactcgtgtggcatagccaaa 32585104  T
Q  270 ccaaatgtgggaacaacaattctc 293  Q
    ||||||||||||| | ||||||||    
T  32585105 ccaaatgtgggaatagcaattctc 32585128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 2335166 - 2335286
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  ||||  ||   |||| |||||||||| |||||||| || ||||||||||||||||||||||| ||||||||||| |    
T  2335166 agttttcctcggcagttaactgcagccgtatttctaaaacttcggtagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaacaa 2335265  T
Q  273 aatgtgggaacaacaattctc 293  Q
     ||||||||||||||||||||    
T  2335266 catgtgggaacaacaattctc 2335286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 27502586 - 27502705
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  |||||||||| ||   ||||  |||| |||||||| || ||||||||||||||||||||||| || ||||||||||    
T  27502586 agttttcctcggcagttaactgcagccggtttcataa---ttcgacagttaactgccgaggggcatttgagtaatttactcgtgtggcatagccaaacca 27502682  T
Q  273 aatgtgggaacaacaattctctt 295  Q
    ||||| |||||||||||||||||    
T  27502683 aatgtaggaacaacaattctctt 27502705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 28617623 - 28617503
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  ||||  ||   |||| ||||| |||| |||||||||||  |||||||||||||||||||||| |||||||||||||    
T  28617623 agttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaagggtatttgagtaatttactcgtgtggcacagccaaacca 28617524  T
Q  273 aatgtgggaacaacaattctc 293  Q
    || ||||||||| ||||||||    
T  28617523 aaagtgggaacagcaattctc 28617503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 914772 - 914655
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  |||||||||| ||   || || |||| ||||||||||| |||||| |||| |||||||| || || ||||||||||    
T  914772 agttttcctcggcagttaactgcagccggtttcataa---tttggcagttaactgccgaagggcatttgggtaaattactcgtctggcatagccaaacca 914676  T
Q  273 aatgtgggaacaacaattctc 293  Q
    |||||||||||||||||||||    
T  914675 aatgtgggaacaacaattctc 914655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 184571 - 184691
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||||  ||||  ||||| |||||||| ||||||| |||||  |||| ||||||||||| |||||||| ||||    
T  184571 gttttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccatacca 184670  T
Q  273 aatgtgggaacaacaattctc 293  Q
     ||||||||||| ||||||||    
T  184671 tatgtgggaacagcaattctc 184691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 162 - 293
Target Start/End: Original strand, 22014442 - 22014574
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaactggcgccggttt-cacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgac 260  Q
    |||||||||| |||||||||||||||||||||| ||||||||| |  |||| ||||| |||||||| ||||||| |||||  |||||||||||||||| |    
T  22014442 tggttatgttgagttttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtaatttactcgtgtggc 22014541  T
Q  261 acagccaaaccaaatgtgggaacaacaattctc 293  Q
    ||||||| |||| | ||| ||| | ||||||||    
T  22014542 acagccataccatacgtgcgaagagcaattctc 22014574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 27501655 - 27501535
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  ||||  ||   |||| |||||||||| ||||||||  |  |||||||||||||||||||||| |||||||||||||    
T  27501655 agttttcctcggcagttaactgcagccgtatttctaaaacttcggtagttaactgccgagaggtatttgagtaatttactcgtgtggcacagccaaacca 27501556  T
Q  273 aatgtgggaacaacaattctc 293  Q
    || ||||||||| ||||||||    
T  27501555 aaagtgggaacagcaattctc 27501535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 36677948 - 36678068
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||||  ||||  ||||| |||||||| ||||||| |||||  |||| ||||||||||| |||||||| ||||    
T  36677948 gttttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccatacca 36678047  T
Q  273 aatgtgggaacaacaattctc 293  Q
     ||||||||||| ||||||||    
T  36678048 tatgtgggaacagcaattctc 36678068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 44933914 - 44933794
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  ||||  ||   |||| ||||| |||| |||||||| || ||||||||||||||||||||||| ||  |||||||||    
T  44933914 agttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcagtgccaaacca 44933815  T
Q  273 aatgtgggaacaacaattctc 293  Q
    |||||||||||| ||||||||    
T  44933814 aatgtgggaacaccaattctc 44933794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 173 - 296
Target Start/End: Original strand, 5533043 - 5533166
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  ||||  ||   |||| ||||| |||| ||||| || ||  |||||||||||||||||||||| |||||||||| ||    
T  5533043 agttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgctgaggggtatttgagtaatttactcgtgtggcacagccaaatca 5533142  T
Q  273 aatgtgggaacaacaattctctta 296  Q
    || |||||||||||||||||||||    
T  5533143 aaagtgggaacaacaattctctta 5533166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 173 - 294
Target Start/End: Original strand, 28618457 - 28618575
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||||||||| |||||||  |||||||||| ||   ||||| |||| ||||||||||| |||||| |||| ||||| ||||| || ||||||||||    
T  28618457 agttttcctcggcatttaactgcagccggtttcataa---ttcggcagttaactgccgaagggcatttgggtaaattacttgtgtggcatagccaaacca 28618553  T
Q  273 aatgtgggaacaacaattctct 294  Q
    |||||||||||| |||||||||    
T  28618554 aatgtgggaacagcaattctct 28618575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 174 - 293
Target Start/End: Complemental strand, 22014300 - 22014180
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||||  ||||  ||||||||   ||||||||||| |||||  ||| |||||||||||| ||||||||||| |    
T  22014300 gttttcctcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccaaacaa 22014201  T
Q  273 aatgtgggaacaacaattctc 293  Q
     ||||||||||| ||||||||    
T  22014200 catgtgggaacagcaattctc 22014180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 174 - 278
Target Start/End: Complemental strand, 28694132 - 28694028
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaa 273  Q
    |||||||||||||||||||||  |||||||| || ||| ||||| |||| |||||||| |||||||||||||||||||||||||  | || |||||| ||    
T  28694132 gttttcctcggcagttaactgcagccggttttactaaacttcggcagttaactgccgagggacatttgagtaatttactcgtgtttctcaaccaaactaa 28694033  T
Q  274 atgtg 278  Q
    |||||    
T  28694032 atgtg 28694028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 219 - 295
Target Start/End: Complemental strand, 43362332 - 43362256
Alignment:
Q  219 agtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctctt 295  Q
    |||| ||||||||  | |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  43362332 agttaactgccgagaggcatttgagtaatttactcgtgtgacatagtcaaaccaaatgtgggaacaacaattctctt 43362256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 486268 - 486181
Alignment:
Q  43 atataatataagtgtgtcgttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagt 130  Q
    |||||||||||||||  |||||||||||| |||||||||||||||||| |||| ||||||  ||||||| ||||||| ||||||||||    
T  486268 atataatataagtgtcccgttgatttgctcgcaattcgtgaaagaagaattggcgaagatttgagagaacttgagaactttgtgaagt 486181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 219 - 293
Target Start/End: Original strand, 915699 - 915773
Alignment:
Q  219 agtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||| |||| ||||||  |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  915699 agttaactgtcgaagggtatttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctc 915773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 169 - 293
Target Start/End: Complemental strand, 21845 - 21720
Alignment:
Q  169 gttcagttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagcca 267  Q
    |||||| ||||||||||||||||||| |||||||| |  ||||  ||||||||   ||||||||| | |||||  ||| |||||||||||| ||||||||    
T  21845 gttcagatttcctcggcagttaactgccgccggttgcctaaaaacttcggtagcaaactgccgaatggcattttcgtattttactcgtgtggcacagcca 21746  T
Q  268 aaccaaatgtgggaacaacaattctc 293  Q
    ||| | ||||||||||||||||||||    
T  21745 aacaagatgtgggaacaacaattctc 21720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 224 - 293
Target Start/End: Original strand, 31185514 - 31185583
Alignment:
Q  224 actgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||||||| ||  |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  31185514 actgccgaggggtatttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctc 31185583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 38604266 - 38604386
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  ||||  ||   |||| ||||| |||| |||| ||| ||  |||||||||||||||| | ||| |||||||||||||    
T  38604266 agttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgtcgaggggtatttgagtaatttacttgggtggcacagccaaacca 38604365  T
Q  273 aatgtgggaacaacaattctc 293  Q
    || ||||||||||||||||||    
T  38604366 aaagtgggaacaacaattctc 38604386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 173 - 289
Target Start/End: Complemental strand, 40740961 - 40740845
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  |||||||    |||||||||| |||| |||| ||||||| ||||| |||| ||||||||||  | |||||||||||    
T  40740961 agttttcctcggcagttaactgcagccggttctttaaaatttcggcagttaactgtcgaaggatatttgggtaaattactcgtgtttctcagccaaacca 40740862  T
Q  273 aatgtgggaacaacaat 289  Q
    |||||| ||||| ||||    
T  40740861 aatgtgtgaacagcaat 40740845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 295
Target Start/End: Original strand, 26663052 - 26663174
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| |||||||| |  ||||  ||||||||   ||||| ||| |||||||  ||| |||||||||||| ||||||||||| |    
T  26663052 gttttcctcggcagttaactgccgccggttgcctaaaaacttcggtagcaaactgctgaaagacattttcgtattttactcgtgtggcacagccaaacaa 26663151  T
Q  273 aatgtgggaacaacaattctctt 295  Q
    |||||||||| | ||||||||||    
T  26663152 aatgtgggaatagcaattctctt 26663174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 34822903 - 34822961
Alignment:
Q  65 atttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaatttt 123  Q
    ||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||    
T  34822903 atttgcttgcaattcgtgaaaaaagttttggtgaagattggagagaaattgagaatttt 34822961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 38603365 - 38603248
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||| ||||||||||  | |||||||| ||   ||||| |||| |||||||| | |||||| ||||||||||||||||| || | || |||||    
T  38603365 agttttcctcgacagttaactgcagtcggtttcataa---ttcggcagttaactgccgaggaacatttaagtaatttactcgtgtggcataaccgaacca 38603269  T
Q  273 aatgtgggaacaacaattctc 293  Q
    |||||||||| ||||||||||    
T  38603268 aatgtgggaagaacaattctc 38603248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 174 - 293
Target Start/End: Complemental strand, 36677767 - 36677646
Alignment:
Q  174 gttttcctc-ggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacc 271  Q
    ||||||||| |||||||||||| ||||||||||  ||||  || |||||   ||||||||||| |||||  ||| |||||||||||| |||||||||||     
T  36677767 gttttcctccggcagttaactgccgccggtttcctaaaaactttggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccaaaca 36677668  T
Q  272 aaatgtgggaacaacaattctc 293  Q
    | ||||||||||||||||||||    
T  36677667 acatgtgggaacaacaattctc 36677646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 1056220 - 1056340
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||| |||| |  ||||  ||| ||||   ||||||||||| |||||  ||| |||||||||||||||||| ||||| |    
T  1056220 gttttcctcggcagttaactgccgctggttgcctaaaaacttcagtagcaaactgccgaagggcattttcgtattttactcgtgtgacacagtcaaacaa 1056319  T
Q  273 aatgtgggaacaacaattctc 293  Q
     ||||||||||||||||||||    
T  1056320 gatgtgggaacaacaattctc 1056340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 160 - 293
Target Start/End: Original strand, 23022292 - 23022426
Alignment:
Q  160 tttggttatgttcagttttcctcggcagttaactggcgccggtttcac--aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgt 257  Q
    ||||||||||| ||||||||||||| ||||| ||| |||||||| |||  |||| ||||  |||| ||||||||||| |||||  ||| ||||||  |||    
T  23022292 tttggttatgtccagttttcctcggtagttagctgccgccggtt-cactaaaaacttcgacagttaactgccgaagggcattttcgtattttactgatgt 23022390  T
Q  258 gacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    | |||||||| || | ||||||||||||||||||||    
T  23022391 ggcacagccatactatatgtgggaacaacaattctc 23022426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 292
Target Start/End: Complemental strand, 41471113 - 41471029
Alignment:
Q  208 aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattct 292  Q
    |||||||||  |||| |||| ||||||||||||||||||||||||||||| || | |||||| ||||||||  ||||||||||||    
T  41471113 aaaatttcgacagttaactgtcgaaggacatttgagtaatttactcgtgttactcggccaaatcaaatgtgtcaacaacaattct 41471029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 43363342 - 43363398
Alignment:
Q  237 atttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||    
T  43363342 atttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaacatcaattctc 43363398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 45064434 - 45064374
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattt 122  Q
    ||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||    
T  45064434 ttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgagaattt 45064374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 5532476 - 5532405
Alignment:
Q  213 ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaaca 284  Q
    ||||| |||| ||||||||||| |||||| |||| ||||||||||| || ||||||||||||||||||||||    
T  5532476 ttcggcagttaactgccgaagggcatttgggtaaattactcgtgtggcatagccaaaccaaatgtgggaaca 5532405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 22550884 - 22551003
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaa 273  Q
    |||||||||||||||||||||  ||||| ||   |||| ||||| |||| ||||||||||| |||||  |||| ||||||||||| |||||||  | |||    
T  22550884 gttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaagggcatttaggtaaattactcgtgtggcacagccttatcaa 22550983  T
Q  274 atgtgggaacaacaattctc 293  Q
    |||||  |||||||||||||    
T  22550984 atgtgtaaacaacaattctc 22551003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 173 - 292
Target Start/End: Original strand, 43520794 - 43520913
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||||| |||||||||||  |||| ||    |||||||||| |||| |||||||| | |||||||| ||||||||||||||  | ||  |||||||    
T  43520794 agttttcctcagcagttaactgcagccgattctttaaaatttcggcagttaactgccgatgaacatttgaataatttactcgtgtttctcactcaaacca 43520893  T
Q  273 aatgtgggaacaacaattct 292  Q
    |||||| |||||||||||||    
T  43520894 aatgtgtgaacaacaattct 43520913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 489508 - 489570
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||| |||| |||||||    
T  489508 ttgatttgcttgcaattcgtgaaaatggatttggtgaagatcggagagaatttgaaaattttg 489570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 207 - 293
Target Start/End: Original strand, 489679 - 489765
Alignment:
Q  207 caaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    ||||||||||  |||| ||||||||||| ||||| |||| |||||||||||| |||||||| || | ||||||||||| ||||||||    
T  489679 caaaatttcgacagttaactgccgaagggcattttagtattttactcgtgtggcacagccatactatatgtgggaacagcaattctc 489765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 295
Target Start/End: Original strand, 17924302 - 17924424
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatt-tcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||| ||||||||||||||| ||||||||||  ||||   |||||||   |||||||||||  ||||  ||| |||||||||||| ||||||||||| |    
T  17924302 gtttttctcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaa 17924401  T
Q  273 aatgtgggaacaacaattctctt 295  Q
     |||||||||||||||| |||||    
T  17924402 catgtgggaacaacaatactctt 17924424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 41249953 - 41250015
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    ||||||||||||||||||||||||   |||||||||||||| |||||||||||| ||||||||    
T  41249953 ttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgtgaattttg 41250015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 42485417 - 42485479
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    ||||||||||||||||||||||||   |||||||||||||| |||||||| ||||||||||||    
T  42485417 ttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaatttgagaattttg 42485479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 208 - 294
Target Start/End: Original strand, 44841927 - 44842013
Alignment:
Q  208 aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctct 294  Q
    |||| ||||| |||| ||||| || ||  |||||| ||||||||| ||||| ||||||||||||||| |||||||||||||||||||    
T  44841927 aaaacttcggcagttaactgctgaggggtatttgactaatttacttgtgtggcacagccaaaccaaaagtgggaacaacaattctct 44842013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 294
Target Start/End: Complemental strand, 1052622 - 1052491
Alignment:
Q  164 gttatgttcagttttcctcggcagttaactggcgccggtttcac--aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgaca 261  Q
    ||||||| ||||||||||||||||||| ||| |||||| |||||  |||| ||||| |||| ||| ||||||| |||||  ||| |||||| ||||| ||    
T  1052622 gttatgtccagttttcctcggcagttagctgccgccgg-ttcactaaaaacttcggcagttaactaccgaagggcattttcgtattttactggtgtggca 1052524  T
Q  262 cagccaaaccaaatgtgggaacaacaattctct 294  Q
    || ||| || | ||||||||||| |||||||||    
T  1052523 catccatactatatgtgggaacagcaattctct 1052491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 298
Target Start/End: Complemental strand, 8419458 - 8419333
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatt-tcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||||  ||||   |||||||   |||||||||||| ||||  ||| |||||||||||| ||||||||||| |    
T  8419458 gttttcctcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaaggatattttggtattttactcgtgtggcacagccaaacaa 8419359  T
Q  273 aatgtgggaacaacaattctcttata 298  Q
     |||| ||| || |||| ||||||||    
T  8419358 catgttggatcagcaatcctcttata 8419333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 177 - 298
Target Start/End: Original strand, 38134134 - 38134255
Alignment:
Q  177 ttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatg 276  Q
    ||||||||||||||||||  |||||||    ||||||| |  |||| |||||||| || ||||||||||||||||| ||||  | |||||||||||||||    
T  38134134 ttcctcggcagttaactgcagccggttctttaaaattttgacagttaactgccgatgggcatttgagtaatttacttgtgtctctcagccaaaccaaatg 38134233  T
Q  277 tgggaacaacaattctcttata 298  Q
    ||  ||||||||| ||| ||||    
T  38134234 tgtaaacaacaatactcatata 38134255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 208 - 289
Target Start/End: Original strand, 39513240 - 39513321
Alignment:
Q  208 aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaat 289  Q
    ||||||||| ||||| |||||||| || ||||||||||||||||||||||  | ||| |||||||||||||  |||||||||    
T  39513240 aaaatttcgatagttaactgccgaggggcatttgagtaatttactcgtgtttctcagtcaaaccaaatgtgtcaacaacaat 39513321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 181 - 289
Target Start/End: Complemental strand, 483829 - 483721
Alignment:
Q  181 tcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtggg 280  Q
    |||||||||||||| |||||||| |  ||||  |||||||   ||||||||||| |||||  ||| |||||||||||| |||| |||||| | |||||||    
T  483829 tcggcagttaactgccgccggttcctaaaaacctcggtagcaaactgccgaagggcattttggtattttactcgtgtggcacaaccaaactatatgtggg 483730  T
Q  281 aacaacaat 289  Q
    |||||||||    
T  483729 aacaacaat 483721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 174 - 289
Target Start/End: Original strand, 7344576 - 7344692
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatt-tcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||||  ||||   |||||||   |||||||||||  ||||  ||| |||||||||||| ||||||||||| |    
T  7344576 gttttcctcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaa 7344675  T
Q  273 aatgtgggaacaacaat 289  Q
     ||||||||||| ||||    
T  7344676 catgtgggaacagcaat 7344692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 173 - 289
Target Start/End: Complemental strand, 13782290 - 13782174
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||| ||  | |||||    ||||||| || |||| |||||||| |||||||| ||||||||||||||||  | |||||||| ||    
T  13782290 agttttcctcggcagttaattgcagtcggttctttaaaattttggcagttaactgccgagggacatttaagtaatttactcgtgtttctcagccaaatca 13782191  T
Q  273 aatgtgggaacaacaat 289  Q
    ||||||  |||||||||    
T  13782190 aatgtgtcaacaacaat 13782174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 173 - 289
Target Start/End: Original strand, 34892827 - 34892943
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  | |||||    |||||||||  |||  |||||||||||| |||||||||| |||||| |||  | |||||||| ||    
T  34892827 agttttcctcggcagttaactgcagtcggttctttaaaatttcgaaagtcaactgccgaaggatatttgagtaaattactcatgtttctcagccaaatca 34892926  T
Q  273 aatgtgggaacaacaat 289  Q
    |||||| ||||||||||    
T  34892927 aatgtgtgaacaacaat 34892943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 174 - 290
Target Start/End: Original strand, 39277480 - 39277596
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaa 273  Q
    ||||||||||| | |||||||  |||| ||  || ||| ||||| |||| |||||||| || ||||||| ||||||||||||||  | ||||||||||||    
T  39277480 gttttcctcggtaattaactgcagccgattctactaaacttcggcagttaactgccgaggggcatttgaataatttactcgtgtttctcagccaaaccaa 39277579  T
Q  274 atgtgggaacaacaatt 290  Q
    |||||  ||||||||||    
T  39277580 atgtgtcaacaacaatt 39277596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 186 - 294
Target Start/End: Complemental strand, 39831198 - 39831090
Alignment:
Q  186 agttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaa 285  Q
    |||||||||  ||||||||   |||||||||| |||| ||| |||| || |||||  |||| ||||||||||| | |||||||||||||||||  |||||    
T  39831198 agttaactgcagccggttttctaaaatttcggcagttaactaccgaggggcatttaggtaaattactcgtgtgtctcagccaaaccaaatgtgtcaacaa 39831099  T
Q  286 caattctct 294  Q
    |||||||||    
T  39831098 caattctct 39831090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 25587 - 25674
Alignment:
Q  207 caaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctct 294  Q
    ||||| ||||| |||| ||||||||||| |||||   || |||||||||||| |||||||| || | |||||||||||||||||||||    
T  25587 caaaacttcggcagttaactgccgaagggcattttgatattttactcgtgtggcacagccatactatatgtgggaacaacaattctct 25674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 226 - 293
Target Start/End: Complemental strand, 184376 - 184309
Alignment:
Q  226 tgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    ||||||||| |||||  ||| |||||||||||| ||||||||||| | ||||||||||||||||||||    
T  184376 tgccgaagggcattttcgtattttactcgtgtggcacagccaaacaacatgtgggaacaacaattctc 184309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 256
Target Start/End: Complemental strand, 3085592 - 3085513
Alignment:
Q  177 ttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtg 256  Q
    ||||||||||||||||||  |||||||    ||||||||||||||| ||| |||| | ||||||||||||||||||||||    
T  3085592 ttcctcggcagttaactgcagccggttctttaaaatttcggtagttaactaccgaggaacatttgagtaatttactcgtg 3085513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 124
Target Start/End: Complemental strand, 39601897 - 39601834
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    |||||||||||||||||||||||||    |||||| |||||| |||||||||||||||||||||    
T  39601897 gttgatttgcttgcaattcgtgaaaatgaatttggcgaagattggagagaaattgagaattttg 39601834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 23018739 - 23018613
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||| |||||||||||  |||||||| |  ||||  ||||||||   ||||||||||| |||||  ||| |||||||||||| ||||||||||| |    
T  23018739 gttttccttggcagttaactaccgccggttgcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccaaacaa 23018640  T
Q  273 aatgtgggaacaacaattctcttatat 299  Q
     |||||| |||| |||||||| |||||    
T  23018639 gatgtggaaacagcaattctcctatat 23018613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 39939096 - 39939158
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    ||||||||||| ||||||||||||   || ||||||||||| |||||||||||||||||||||    
T  39939096 ttgatttgctttcaattcgtgaaaatggacttggtgaagattggagagaaattgagaattttg 39939158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 214 - 295
Target Start/End: Complemental strand, 2416216 - 2416135
Alignment:
Q  214 tcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctctt 295  Q
    |||| |||| |||| ||||||||||||  ||| |||||| ||||| |||||||| || | ||||||||||||||||||||||    
T  2416216 tcggcagttaactgtcgaaggacattttggtattttacttgtgtggcacagccatactatatgtgggaacaacaattctctt 2416135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 294
Target Start/End: Complemental strand, 32584107 - 32583986
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  ||||  ||   |||| ||||  |||| ||| |||| ||  |||||||||||||||||||||| |||||| |||  |    
T  32584107 agttttcctcggcagttaactgcagccgtatttctaaaacttcgacagttaactaccgaggggtatttgagtaatttactcgtgtggcacagctaaagta 32584008  T
Q  273 aatgtgggaacaacaattctct 294  Q
    || ||||||||| |||||||||    
T  32584007 aaagtgggaacagcaattctct 32583986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 278
Target Start/End: Original strand, 36345959 - 36346028
Alignment:
Q  209 aaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtg 278  Q
    ||||||||| |||| |||| ||||| |||||||||||||||||||||||    |||||||||||||||||    
T  36345959 aaatttcggcagttaactgtcgaagaacatttgagtaatttactcgtgtttatcagccaaaccaaatgtg 36346028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 296
Target Start/End: Complemental strand, 39491155 - 39491039
Alignment:
Q  180 ctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgg 279  Q
    ||||| |||||||||  |||||||||   ||| ||||  |||| ||||||||| |||||||  |||| ||||||||||| | ||||  |||||||||||     
T  39491155 ctcggaagttaactgtagccggtttctataaaattcgacagttaactgccgaaagacatttatgtaaattactcgtgtgtctcagcttaaccaaatgtgt 39491056  T
Q  280 gaacaacaattctctta 296  Q
     ||||||||||||||||    
T  39491055 caacaacaattctctta 39491039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 224 - 295
Target Start/End: Complemental strand, 2878587 - 2878516
Alignment:
Q  224 actgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctctt 295  Q
    ||||||||||| |||||  ||| |||||||||||||||||||||||| | | |  |||||||||||||||||    
T  2878587 actgccgaagggcattttggtattttactcgtgtgacacagccaaacaacacgcaggaacaacaattctctt 2878516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 20859627 - 20859742
Alignment:
Q  178 tcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgt 277  Q
    ||||||| |||||| ||  |||||||||   ||| ||||| |||| |||| ||| ||||||||  |||| || |||||||| | ||||||||||||||||    
T  20859627 tcctcgggagttaaatgcagccggtttccacaaacttcggcagttaactgtcgagggacatttaggtaaattcctcgtgtgtctcagccaaaccaaatgt 20859726  T
Q  278 gggaacaacaattctc 293  Q
    |  |||||||||||||    
T  20859727 gtcaacaacaattctc 20859742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 266
Target Start/End: Original strand, 31746007 - 31746097
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagcc 266  Q
    |||||||||||| |||||||||  |||| || || ||   ||||| |||| ||||||||||||||||| ||||| ||||| |||||||||||||    
T  31746007 agttttcctcggtagttaactgcagccgattccataa---ttcggcagttaactgccgaaggacattttagtaaattactggtgtgacacagcc 31746097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 61 - 123
Target Start/End: Complemental strand, 43188243 - 43188181
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaaga-tttggtgaagatcggagagaaattgagaatttt 123  Q
    ||||||||||||||||||| ||||| | || |||||||||||| ||||||||||||||||||||    
T  43188243 gttgatttgcttgcaattcttgaaa-atgactttggtgaagattggagagaaattgagaatttt 43188181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 171 - 266
Target Start/End: Complemental strand, 45409928 - 45409833
Alignment:
Q  171 tcagttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagcc 266  Q
    ||||||| |||||||||||||||| ||||| |||   |||| ||||| |||| ||||||||||| |||||  ||||  |||||||||| |||||||    
T  45409928 tcagtttgcctcggcagttaactgccgccgatttactaaaacttcggcagttaactgccgaagggcattttcgtaaagtactcgtgtggcacagcc 45409833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 295
Target Start/End: Complemental strand, 16939431 - 16939313
Alignment:
Q  177 ttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatg 276  Q
    ||||||||||||||||||  |||||||    |||||||| | |||| ||||||||| |  ||||| |||| ||||||||||  | |||| ||||||||||    
T  16939431 ttcctcggcagttaactgcagccggttctttaaaatttcagcagttaactgccgaaaggtatttgggtaaattactcgtgtttctcagcaaaaccaaatg 16939332  T
Q  277 tgggaacaacaattctctt 295  Q
    || ||||| |||| |||||    
T  16939331 tgtgaacagcaatactctt 16939313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 295
Target Start/End: Complemental strand, 32375705 - 32375583
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatt-tcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||||  ||||   |||||||   ||||| |||||  ||||   || |||||||||||| ||||||||||| |    
T  32375705 gttttcctcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgctgaagggtattttgatattttactcgtgtggcacagccaaacaa 32375606  T
Q  273 aatgtgggaacaacaattctctt 295  Q
     ||||||||||| |||| |||||    
T  32375605 catgtgggaacagcaatactctt 32375583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 293
Target Start/End: Original strand, 42485603 - 42485677
Alignment:
Q  219 agtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||| |||||||||||||||||   || |||||||||||| |||||||| || | ||||||||||| ||||||||    
T  42485603 agttaactgccgaaggacattttgatattttactcgtgtggcacagccatactatatgtgggaacagcaattctc 42485677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 25864812 - 25864880
Alignment:
Q  55 tgtgtcgttgatttgcttgcaattcgtgaaagaaga-tttggtgaagatcggagagaaattgagaatttt 123  Q
    ||||| ||||||||| ||||||||||||||| | || ||||||||||||  |||||||||||||||||||    
T  25864812 tgtgtagttgatttgattgcaattcgtgaaa-atgactttggtgaagattagagagaaattgagaatttt 25864880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 236 - 289
Target Start/End: Complemental strand, 37651808 - 37651755
Alignment:
Q  236 catttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaat 289  Q
    ||||||||||||||||||||||  | |||||||||||||||||  |||||||||    
T  37651808 catttgagtaatttactcgtgtttctcagccaaaccaaatgtgtcaacaacaat 37651755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 39252202 - 39252149
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattg 115  Q
    ||||||||||||||||||||||||    ||||||||||||| ||||||||||||    
T  39252202 ttgatttgcttgcaattcgtgaaaatgaatttggtgaagattggagagaaattg 39252149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 224 - 293
Target Start/End: Complemental strand, 40075136 - 40075067
Alignment:
Q  224 actgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||| |||||| ||||| ||||| ||||||||||| | ||||| |||||||||||  |||||||||||||    
T  40075136 actgtcgaagggcatttaagtaaattactcgtgtgtctcagcctaaccaaatgtgtcaacaacaattctc 40075067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 2416235 - 2416203
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaactg 194  Q
    |||||||||||||||||||||||||||||||||    
T  2416235 tggttatgttcagttttcctcggcagttaactg 2416203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 293
Target Start/End: Original strand, 22519622 - 22519734
Alignment:
Q  181 tcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtggg 280  Q
    |||| ||||||||| |||||||| |  ||||  |||||||   ||||||||||| |||||  ||| |||||||||||| |||| |||||| | |||||||    
T  22519622 tcggtagttaactgccgccggttcctaaaaacctcggtagcaaactgccgaagggcattttggtattttactcgtgtggcacaaccaaactatatgtggg 22519721  T
Q  281 aacaacaattctc 293  Q
    ||||  |||||||    
T  22519722 aacagtaattctc 22519734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 5304049 - 5304112
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    |||||||||||||||||||||||||   | |||||||||||| ||| |||| ||||||| ||||    
T  5304049 gttgatttgcttgcaattcgtgaaaatggctttggtgaagattggaaagaatttgagaagtttg 5304112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 10749692 - 10749759
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacattt 240  Q
    |||||||||||||||||||||| ||| |||||   |||| ||||| |||| ||||||||||| |||||    
T  10749692 agttttcctcggcagttaactgccgctggtttactaaaacttcggcagttaactgccgaagggcattt 10749759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 12206778 - 12206695
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgt 257  Q
    |||||||||| | ||||||||   ||||||| || ||| ||||| |||| |||||| | |||||||||||||||||| ||||||    
T  12206778 gttttcctcgacggttaactgcacccggttttactaaacttcggcagttaactgccaatggacatttgagtaatttaatcgtgt 12206695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 12451206 - 12451123
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgt 257  Q
    |||||||||| | ||||||||   ||||||| || ||| ||||| |||| |||||| | |||||||||||||||||| ||||||    
T  12451206 gttttcctcgacggttaactgcacccggttttactaaacttcggcagttaactgccaatggacatttgagtaatttaatcgtgt 12451123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 290
Target Start/End: Complemental strand, 26659504 - 26659391
Alignment:
Q  178 tcctcggcagttaactggcgccggtttcac--aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaat 275  Q
    ||||||| ||||| ||| |||||||| |||  |||| ||||| |||| ||||||||||| |||||  ||| |||||| ||||| |||||||| || | ||    
T  26659504 tcctcggtagttagctgccgccggtt-cactaaaaacttcggcagttaactgccgaagggcattttcgtattttactggtgtggcacagccatactatat 26659406  T
Q  276 gtgggaacaacaatt 290  Q
    ||||||||| |||||    
T  26659405 gtgggaacagcaatt 26659391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 207 - 289
Target Start/End: Complemental strand, 22510568 - 22510486
Alignment:
Q  207 caaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaat 289  Q
    ||||| ||||| |||| ||||||||||| |||||  ||| |||||||||||| |||||||| || | ||||| ||||| ||||    
T  22510568 caaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgagaacagcaat 22510486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 66 - 124
Target Start/End: Original strand, 39846873 - 39846931
Alignment:
Q  66 tttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    ||||||||||||| ||||||   | |||||||||||| |||||||||||| ||||||||    
T  39846873 tttgcttgcaatttgtgaaaatggctttggtgaagattggagagaaattgtgaattttg 39846931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 293
Target Start/End: Complemental strand, 42731840 - 42731766
Alignment:
Q  219 agtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||| ||||||||| || |||||| ||| ||||| ||||  | |||||||||||||||||  |||||||||||||    
T  42731840 agttaactgccgaaagatatttgaataaattacttgtgtttctcagccaaaccaaatgtgtaaacaacaattctc 42731766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 293
Target Start/End: Complemental strand, 45064288 - 45064226
Alignment:
Q  231 aaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||| ||||||||||||||||||||||| |||| |||| | |||  |||||||| ||||||||    
T  45064288 aagggcatttgagtaatttactcgtgtggcacaaccaatctaaacctgggaacagcaattctc 45064226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 296
Target Start/End: Complemental strand, 3695422 - 3695302
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||||||| |||||||||  ||||||| || ||   ||||| |||| |||||||| || ||||||  ||| ||||||||||  | |||||||  ||    
T  3695422 agttttcctcggtagttaactgcagccggttccataa---ttcggcagttaactgccgaggggcatttggataaattactcgtgtttctcagccaatgca 3695326  T
Q  273 aatgtgggaacaacaattctctta 296  Q
     |||||  ||||||||||||||||    
T  3695325 tatgtgtcaacaacaattctctta 3695302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 295
Target Start/End: Complemental strand, 20854659 - 20854550
Alignment:
Q  186 agttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaa 285  Q
    ||||||||| |||||||||   |||| ||||| |||| |||||||| |||||| |   ||| ||||||||||  | |||||  | |||||||| ||||||    
T  20854659 agttaactgccgccggttttctaaaacttcggcagttaactgccgagggacatgtagataaattactcgtgtttctcagccttatcaaatgtgtgaacaa 20854560  T
Q  286 caattctctt 295  Q
    ||||||||||    
T  20854559 caattctctt 20854550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 35026687 - 35026618
Alignment:
Q  55 tgtgtcgttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    ||||| ||| |||||||||||||||||||||    ||||||||||||| | |||||||||  ||||||||    
T  35026687 tgtgtagttaatttgcttgcaattcgtgaaaatgaatttggtgaagattgtagagaaatttcgaattttg 35026618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 257
Target Start/End: Original strand, 39208394 - 39208443
Alignment:
Q  208 aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgt 257  Q
    ||||||| || |||| |||  |||||||||||||||||||||||||||||    
T  39208394 aaaattttggcagttaactatcgaaggacatttgagtaatttactcgtgt 39208443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 261
Target Start/End: Complemental strand, 39252103 - 39252018
Alignment:
Q  176 tttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgaca 261  Q
    ||||||||||||||||||| |||||||||   || | ||| | |||| ||||||||||| |||||  ||||  |||||||||||||    
T  39252103 tttcctcggcagttaactgccgccggtttactaatacttcagcagttgactgccgaagggcattttcgtaaagtactcgtgtgaca 39252018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #92
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 173 - 257
Target Start/End: Original strand, 7121804 - 7121888
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgt 257  Q
    |||||||||| |||||||||||  |||||||    |||||||||  |||| ||||||||  | ||||||||||||||||| ||||    
T  7121804 agttttcctcagcagttaactgcagccggttctttaaaatttcgacagttaactgccgagaggcatttgagtaatttacttgtgt 7121888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #93
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 17924104 - 17924044
Alignment:
Q  224 actgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaaca 284  Q
    |||||||||||  ||||  ||| |||||||||||| ||||||||||| | |||||||||||    
T  17924104 actgccgaagggtattttggtattttactcgtgtggcacagccaaacaacatgtgggaaca 17924044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #94
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 22961500 - 22961580
Alignment:
Q  177 ttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgt 257  Q
    ||||||||||||||||||  | |||||    |||||||||| |||  ||||| ||||||||||| ||||||||| ||||||    
T  22961500 ttcctcggcagttaactgcaggcggttctttaaaatttcggcagtaaactgcagaaggacatttaagtaatttaatcgtgt 22961580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #95
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 31184585 - 31184549
Alignment:
Q  236 catttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||| || ||||||||||    
T  31184585 catttgagtaatttactcgtgtggcatagccaaacca 31184549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #96
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 213 - 293
Target Start/End: Original strand, 37328862 - 37328942
Alignment:
Q  213 ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    ||||| |||| |||||||||| |||||| | ||  ||||| ||||| | |||||||||||||||||  ||||| |||||||    
T  37328862 ttcggcagttaactgccgaagaacatttaaatatcttacttgtgtgtctcagccaaaccaaatgtgtcaacaataattctc 37328942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #97
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 45064338 - 45064302
Alignment:
Q  169 gttcagttttcctcggcagttaactggcgccggtttc 205  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  45064338 gttcagtattcctcggcagttaactgccgccggtttc 45064302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 1e-45; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 30708742 - 30708859
Alignment:
Q  19 gtctagtcaaacctgaacactactatataatataagtgtgtcgttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgaga 118  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||| |||||| |||||||||||||||    
T  30708742 gtctagtcaaacctgaacactactatataatataagtgtgccgttgatttgcctccaattcgtgaaagaagatttggcgaagattggagagaaattgaga 30708841  T
Q  119 attttgtgaagttttgga 136  Q
    ||||||| ||||||||||    
T  30708842 attttgtaaagttttgga 30708859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 28880160 - 28880277
Alignment:
Q  19 gtctagtcaaacctgaacactactatataatataagtgtgtcgttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgaga 118  Q
    |||||||||||| ||||||||||||||||||||||||||  ||||||||||| |||||||||||||| ||||||||| |||||| ||||| |||||||||    
T  28880160 gtctagtcaaacttgaacactactatataatataagtgtcccgttgatttgcatgcaattcgtgaaataagatttggcgaagattggagaaaaattgaga 28880259  T
Q  119 attttgtgaagttttgga 136  Q
    ||||||||||||||||||    
T  28880260 attttgtgaagttttgga 28880277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 3892458 - 3892575
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  |||||||||| ||   ||||| |||| |||||||| |||||||||||||||||||||||||| || | ||||||||    
T  3892458 agttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgagggacatttgagtaatttactcgtgtggcataaccaaacca 3892554  T
Q  273 aatgtgggaacaacaattctc 293  Q
    |||||||||||||||||||||    
T  3892555 aatgtgggaacaacaattctc 3892575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 174 - 293
Target Start/End: Complemental strand, 27659994 - 27659874
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||| | || |||||||  ||||  ||||| |||||||| ||||||| ||||||||||||||||||||||| |||||||||||||    
T  27659994 gttttcctcggcagttaaccgccgtcggtttcctaaaaacttcggcagtttactaccgaagggcatttgagtaatttactcgtgtggcacagccaaacca 27659895  T
Q  273 aatgtgggaacaacaattctc 293  Q
    |||||||||||| ||||||||    
T  27659894 aatgtgggaacagcaattctc 27659874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 175 - 293
Target Start/End: Complemental strand, 8574735 - 8574617
Alignment:
Q  175 ttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaa 273  Q
    ||||||||| |||||||||| |||| |||||  ||||  ||||| |||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||    
T  8574735 ttttcctcgacagttaactgccgccagtttcctaaaaacttcggcagtttactaccgaagggcatttgagtaatttactcgtgtg-cacagccaaaccaa 8574637  T
Q  274 atgtgggaacaacaattctc 293  Q
    ||||||||||||||||||||    
T  8574636 atgtgggaacaacaattctc 8574617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 66 - 294
Target Start/End: Original strand, 8580389 - 8580619
Alignment:
Q  66 tttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagttttggaaaatggggaactct-gttctgtgatttgg 164  Q
    ||||||||||||||||||||   |||||||||||||| ||||||||||||||||||| |     |||| | |||||||    ||| || ||||| | |||    
T  8580389 tttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgagaatttagaaggttttttggaaatgggaggttctggtactgtgttctgg 8580488  T
Q  165 ttatgttcagttttcctcggcagttaactggcgccggttt-cacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacaca 263  Q
    ||||||||| |||||||||||||||||||| ||||| ||| |  |||| ||||| ||   ||| ||||||| ||||||||||||||||||||||| ||||    
T  8580489 ttatgttcaattttcctcggcagttaactgccgccgatttcctaaaaacttcggcagcaaactaccgaagggcatttgagtaatttactcgtgtggcaca 8580588  T
Q  264 gccaaaccaaatgtgggaacaacaattctct 294  Q
    || |||| | ||||||||| | |||||||||    
T  8580589 gctaaactatatgtgggaatagcaattctct 8580619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 62 - 293
Target Start/End: Original strand, 14569 - 14801
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtga-agttttggaaaatggggaactct-gttctgtga 159  Q
    ||||||||||||||||||||||||   |||||| ||||||| |||||||||||||||||||||  |  ||||||| ||||||| |  ||| |||||| |     
T  14569 ttgatttgcttgcaattcgtgaaaatggatttgttgaagattggagagaaattgagaattttgaaattgttttgg-aaatgggaagttctggttctgcgt 14667  T
Q  160 tttggttatgttcagttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtga 259  Q
    | |||||  |||||| ||||||||||||||||||   ||||  ||   |||| ||||| |||| |||||||||||||||||||||||||||||||||||     
T  14668 tctggtttagttcagatttcctcggcagttaactacagccgtatttctaaaacttcggcagttaactgccgaaggacatttgagtaatttactcgtgtgg 14767  T
Q  260 cacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||| ||  | ||||||||  |||| ||||||||    
T  14768 cacaaccttatcaaatgtgtaaacagcaattctc 14801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 174 - 293
Target Start/End: Complemental strand, 13837778 - 13837658
Alignment:
Q  174 gttttcctcggcagttaactggcgccggttt-cacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||| |  |||| ||||| |||||||||||||||| |||||  ||||  |||||||||| |||||||||| ||    
T  13837778 gttttcctcggcagttaactgccgccggtttactaaaaacttcggcagtttactgccgaagggcatttttgtaaagtactcgtgtggcacagccaaagca 13837679  T
Q  273 aatgtgggaacaacaattctc 293  Q
    |||||||||||| ||||||||    
T  13837678 aatgtgggaacagcaattctc 13837658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 174 - 295
Target Start/End: Complemental strand, 28876697 - 28876575
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttc-acaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||| ||||||||| |||||||||| | |||| ||||||||   ||||||||||| |||||  ||| |||||||||||| ||||||||||| |    
T  28876697 gttttcctcgggagttaactgccgccggtttccaaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccaaacaa 28876598  T
Q  273 aatgtgggaacaacaattctctt 295  Q
     ||||||||||||||||| ||||    
T  28876597 catgtgggaacaacaattttctt 28876575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 61 - 124
Target Start/End: Complemental strand, 7757518 - 7757455
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    |||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||    
T  7757518 gttgatttgcttgcaattcgtgaaaatagatttggtgaagattggagagaaattgagaattttg 7757455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 174 - 295
Target Start/End: Complemental strand, 28238193 - 28238071
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||||  ||||  ||||||||   ||||||||||| |||||  ||| |||||||||||| ||||||||||| |    
T  28238193 gttttcctcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccaaacaa 28238094  T
Q  273 aatgtgggaacaacaattctctt 295  Q
     ||||||||| | ||||||||||    
T  28238093 catgtgggaagagcaattctctt 28238071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 5796 - 5715
Alignment:
Q  208 aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaat 289  Q
    |||| ||||| |||| |||||||| || | ||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  5796 aaaacttcggcagttaactgccgaggggcgtttgagtaatttactcgtgtggcacagctaaaccaaatgtgggaacaacaat 5715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 3891538 - 3891418
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  ||||  ||   |||| ||||| |||| |||||||| ||  |||||||||||||||||||||| ||||||||||  |    
T  3891538 agttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagccaaagta 3891439  T
Q  273 aatgtgggaacaacaattctc 293  Q
    || ||||||||| ||||||||    
T  3891438 aaagtgggaacagcaattctc 3891418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 174 - 293
Target Start/End: Complemental strand, 37814636 - 37814516
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaa-atttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| |||||||||   ||| ||||||||||   |||||||||||  ||||  ||| |||||||||||| ||||||||||| |    
T  37814636 gttttcctcggcagttaactgccgccggtttactaaatatttcggtagcaaactgccgaagggtatttttgtattttactcgtgtggcacagccaaacaa 37814537  T
Q  273 aatgtgggaacaacaattctc 293  Q
     ||||||||||| ||||||||    
T  37814536 catgtgggaacagcaattctc 37814516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 19037688 - 19037601
Alignment:
Q  43 atataatataagtgtgtcgttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagt 130  Q
    |||||||||||||||  |||||||||||| |||||||||||||||||| |||  ||||||  ||||||| ||||||| ||||||||||    
T  19037688 atataatataagtgtcccgttgatttgctcgcaattcgtgaaagaagaattgacgaagatttgagagaacttgagaactttgtgaagt 19037601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 62 - 194
Target Start/End: Complemental strand, 28876836 - 28876703
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagttttggaaaatggggaactct-gttctgtgat 160  Q
    ||||||||||||||||||||||||   ||||||| |||||| |||||||||||||||||||||     |||| | |||||||    ||| |||||| | |    
T  28876836 ttgatttgcttgcaattcgtgaaaatggatttggggaagattggagagaaattgagaattttgaaggttttttggaaatgggaggttctggttctgcgtt 28876737  T
Q  161 ttggttatgttcagttttcctcggcagttaactg 194  Q
     ||||||||||||| |||||||||||||||||||    
T  28876736 ctggttatgttcagatttcctcggcagttaactg 28876703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 173 - 278
Target Start/End: Complemental strand, 30192547 - 30192442
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||| ||||||||||  |||||||    |||||||||| |||| ||||||||||| ||||||||||||||||||||||  | ||| |||| ||    
T  30192547 agttttcctcgacagttaactgcagccggttctttaaaatttcggcagttaactgccgaagggcatttgagtaatttactcgtgtttctcagtcaaatca 30192448  T
Q  273 aatgtg 278  Q
    ||||||    
T  30192447 aatgtg 30192442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 174 - 289
Target Start/End: Original strand, 14280919 - 14281035
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatt-tcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||||  ||||   |||||||   |||||||||||  ||||  ||| |||||||||||||||||||||||| |    
T  14280919 gttttcctcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtgacacagccaaacaa 14281018  T
Q  273 aatgtgggaacaacaat 289  Q
     ||||||||||| ||||    
T  14281019 catgtgggaacagcaat 14281035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 175 - 278
Target Start/End: Original strand, 18512672 - 18512774
Alignment:
Q  175 ttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaa 274  Q
    ||||||||||||||||||||  |||||||| || ||| ||||| |||| ||||||||||  ||||| ||||||||||||||||  | ||||||||| |||    
T  18512672 ttttcctcggcagttaactgcagccggttttactaaacttcggcagttaactgccgaagagcattt-agtaatttactcgtgtttctcagccaaactaaa 18512770  T
Q  275 tgtg 278  Q
    ||||    
T  18512771 tgtg 18512774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 38408490 - 38408605
Alignment:
Q  178 tcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgt 277  Q
    ||||||| ||||||||| || ||||||   |||| ||||| |||| | ||||||||| |||||  |||| ||||||||||| | ||||||||||||||||    
T  38408490 tcctcgggagttaactgccgtcggttttctaaaacttcggcagttaattgccgaagggcatttaggtaaattactcgtgtgtctcagccaaaccaaatgt 38408589  T
Q  278 gggaacaacaattctc 293  Q
    |  |||||||||||||    
T  38408590 gtcaacaacaattctc 38408605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 208 - 294
Target Start/End: Complemental strand, 11027114 - 11027028
Alignment:
Q  208 aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctct 294  Q
    |||| ||||| |||| ||||||||||| |||||  ||| |||||||||||| |||||||| || | |||||||||||||||||||||    
T  11027114 aaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacaacaattctct 11027028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 28241678 - 28241740
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    ||||||||||||||||||||||||   |||||||||||||| |||||||| ||||||||||||    
T  28241678 ttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaatttgagaattttg 28241740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 178 - 294
Target Start/End: Original strand, 11033485 - 11033602
Alignment:
Q  178 tcctcggcagttaactggcgccggttt-cacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatg 276  Q
    ||||||| ||||  ||| ||||||||| | ||||| ||||| |||| |||||||||||||||||  ||| ||||||| |||| |||||||| || | |||    
T  11033485 tcctcggtagtttgctgccgccggtttactcaaaacttcggcagttaactgccgaaggacattttggtattttactcatgtggcacagccatactatatg 11033584  T
Q  277 tgggaacaacaattctct 294  Q
    |||||||| |||||||||    
T  11033585 tgggaacagcaattctct 11033602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 41622193 - 41622112
Alignment:
Q  208 aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaat 289  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||||  | ||| ||||| |||||||  |||||||||    
T  41622193 aaaatttcggcagttaactgccgatggacatttgagtaatttactcgtgtttctcagtcaaactaaatgtgtcaacaacaat 41622112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 181 - 294
Target Start/End: Original strand, 38971649 - 38971762
Alignment:
Q  181 tcggcagttaactggcgccggttt-cacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgg 279  Q
    ||||||||||||||  |||||||| ||||||| ||||| |||| ||||||||||| |||||  |||| ||| ||||||| | || || |||||||||||     
T  38971649 tcggcagttaactgcagccggtttccacaaaa-ttcgggagttaactgccgaagggcatttaggtaaattagtcgtgtgtctcaacctaaccaaatgtgt 38971747  T
Q  280 gaacaacaattctct 294  Q
     ||||||||||||||    
T  38971748 caacaacaattctct 38971762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 175 - 292
Target Start/End: Original strand, 11348495 - 11348612
Alignment:
Q  175 ttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaa 274  Q
    ||||||||||||||||||||   |||| ||   |||| ||||| |||| |||||||| | |||||||||||||||||||||||  | |||||||||  ||    
T  11348495 ttttcctcggcagttaactgcatccggatttctaaaacttcggcagttaactgccgaggaacatttgagtaatttactcgtgtttctcagccaaactcaa 11348594  T
Q  275 tgtgggaacaacaattct 292  Q
    ||||  |||| |||||||    
T  11348595 tgtgtcaacagcaattct 11348612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 293
Target Start/End: Original strand, 38860238 - 38860307
Alignment:
Q  224 actgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    ||||||||||| |||||  ||| |||||||||||| |||||||| || | ||||||||||||||||||||    
T  38860238 actgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacaacaattctc 38860307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 293
Target Start/End: Complemental strand, 19035251 - 19035139
Alignment:
Q  181 tcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtggg 280  Q
    |||||||||||||| |||||||| |  ||||  |||||||   |||||||| || |||||  ||| |||||||||||| ||||| ||||| | |||||||    
T  19035251 tcggcagttaactgccgccggttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgtggcacagtcaaactatatgtggg 19035152  T
Q  281 aacaacaattctc 293  Q
    |||| ||||||||    
T  19035151 aacagcaattctc 19035139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 19041136 - 19041256
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcac-aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||| ||||||| |||||| ||||| ||||   |||| ||||||||   |||||||||| ||||||  ||| |||||||||||| |||||||| || |    
T  19041136 gttttcttcggcagctaactgccgccgatttcgttaaaacttcggtagcaaactgccgaagaacattttggtattttactcgtgtggcacagccatacta 19041235  T
Q  273 aatgtgggaacaacaattctc 293  Q
     ||||||||||| ||||||||    
T  19041236 tatgtgggaacagcaattctc 19041256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 30711178 - 30711298
Alignment:
Q  174 gttttcctcggcagttaactggcgccg-gtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| |||||  || |  |||| ||||| |||| |||||||| |  |||||| |||||||||| ||||| || |||||||| |    
T  30711178 gttttcctcggcagttaactgccgccgacttcctaaaaacttcggcagttaactgccgaggagcatttgcgtaatttacttgtgtggcatagccaaacta 30711277  T
Q  273 aatgtgggaacaacaattctc 293  Q
    |||||| ||| | ||||||||    
T  30711278 aatgtgagaaaagcaattctc 30711298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 289
Target Start/End: Original strand, 41623066 - 41623182
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||| |||||||||||| ||||  |||||||    |||||||||| |||| |||||||||||  ||||| |||| |||| |||||  | |||| ||||||    
T  41623066 agttgtcctcggcagtttactgcagccggttctttaaaatttcggcagttaactgccgaagggtatttgggtaaattacccgtgtttctcagctaaacca 41623165  T
Q  273 aatgtgggaacaacaat 289  Q
    |||||| ||||||||||    
T  41623166 aatgtgtgaacaacaat 41623182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 293
Target Start/End: Original strand, 8539536 - 8539654
Alignment:
Q  175 ttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaa 274  Q
    ||||||||||||||||||||  ||||| ||   |||| ||||| |||| |||||||| ||  |||||||||||||||| ||||  | |||||||||  ||    
T  8539536 ttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaggggtatttgagtaatttacttgtgtttctcagccaaactcaa 8539635  T
Q  275 tgtgggaacaacaattctc 293  Q
    ||||  |||| ||||||||    
T  8539636 tgtgtcaacagcaattctc 8539654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 278
Target Start/End: Complemental strand, 18512279 - 18512181
Alignment:
Q  180 ctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtg 278  Q
    |||||||||||||||  |||||||| || ||| ||||| |||| |||||||| |  ||||||| ||||||||||||||  |  |||||||| |||||||    
T  18512279 ctcggcagttaactgcagccggttttactaaacttcggcagttaactgccgatgagcatttgaataatttactcgtgtttctaagccaaactaaatgtg 18512181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 293
Target Start/End: Original strand, 28241852 - 28241938
Alignment:
Q  207 caaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    ||||| ||||| |||| |||||||||||  ||||   || |||||||||||| |||||||| || | ||||||||||||||||||||    
T  28241852 caaaacttcggcagttaactgccgaagggtattttgatattttactcgtgtggcacagccatactatatgtgggaacaacaattctc 28241938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 35671137 - 35671015
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  |||||||    |||||||||  |||| | |||||| | |||||| ||||||||||||||||  | ||  |||| ||    
T  35671137 agttttcctcggcagttaactgcagccggttctttaaaatttcgacagttaattgccgaggaacatttaagtaatttactcgtgtttctcaatcaaatca 35671038  T
Q  273 aatgtgggaacaacaattctctt 295  Q
    ||||||  ||||||||| |||||    
T  35671037 aatgtgtcaacaacaatactctt 35671015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 289
Target Start/End: Original strand, 35672057 - 35672139
Alignment:
Q  207 caaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaat 289  Q
    ||||| ||||| |||| |||||||| ||||||||||||||||||||| |||  | |||||||| ||||| || ||||| ||||    
T  35672057 caaaacttcggcagttaactgccgagggacatttgagtaatttactcatgtttctcagccaaatcaaatatgtgaacagcaat 35672139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 293
Target Start/End: Complemental strand, 38853499 - 38853413
Alignment:
Q  207 caaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    ||||| ||||| |||| ||||||||||| |||||  ||| |||||||||||| |||||||| || | || || ||||||||||||||    
T  38853499 caaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatatgagaacaacaattctc 38853413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 175 - 252
Target Start/End: Original strand, 2170575 - 2170652
Alignment:
Q  175 ttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttact 252  Q
    ||||||||||||||||||||  |||||||    ||||||||| ||||| |||| ||||||| |||||| |||||||||    
T  2170575 ttttcctcggcagttaactgcagccggttctttaaaatttcgatagttaactgtcgaaggatatttgaataatttact 2170652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 213 - 266
Target Start/End: Original strand, 8680301 - 8680354
Alignment:
Q  213 ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagcc 266  Q
    ||||| |||| ||||||||||| |||||| |||| |||||||||||||||||||    
T  8680301 ttcggcagttaactgccgaagggcatttgggtaaattactcgtgtgacacagcc 8680354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 37820930 - 37820986
Alignment:
Q  237 atttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    ||||| |||||||||||||||| |||| ||| || | ||||||||||||||||||||    
T  37820930 atttgcgtaatttactcgtgtggcacaaccatactatatgtgggaacaacaattctc 37820986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 13838443 - 13838562
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaa 273  Q
    ||||||||||| |||||||||  |||||||||   | | ||||| |||| |||||||| ||  ||||| |||||||||||||||  | ||||||||| |     
T  13838443 gttttcctcggtagttaactgcagccggtttcttcagaattcggcagttaactgccgaggggtatttgggtaatttactcgtgtttctcagccaaacaac 13838542  T
Q  274 atgtgggaacaacaattctc 293  Q
    |||||  |||| ||||||||    
T  13838543 atgtgtcaacagcaattctc 13838562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 284
Target Start/End: Complemental strand, 14279903 - 14279792
Alignment:
Q  175 ttttcctcggcagttaactggcgccggtttcacaaaatt-tcggtagtttactgccga-aggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||||| ||||||||| ||||||||||  ||||   ||||||||| |||||||| |||  ||||| |||| ||||| ||||| |||||||| || |    
T  14279903 ttttcctcgggagttaactgccgccggtttcctaaaaacctcggtagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatacta 14279804  T
Q  273 aatgtgggaaca 284  Q
     |||||||||||    
T  14279803 tatgtgggaaca 14279792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 295
Target Start/End: Complemental strand, 30705187 - 30705069
Alignment:
Q  178 tcctcggcagttaactggcgccggttt-cacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatg 276  Q
    ||||||| ||||||||| ||||||||| |  |||| ||||| |||| ||||| ||||| |||||  |||| | ||||||||| |||||||  |  |||||    
T  30705187 tcctcggtagttaactgccgccggtttactaaaaacttcggcagttaactgctgaagggcatttacgtaaatgactcgtgtggcacagccttatgaaatg 30705088  T
Q  277 tgggaacaacaattctctt 295  Q
    ||  |||||||||||||||    
T  30705087 tgtaaacaacaattctctt 30705069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 175 - 289
Target Start/End: Original strand, 40789227 - 40789341
Alignment:
Q  175 ttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaa 274  Q
    ||||||||||||||||||||  |||| ||    |||||||| ||| || |||||| | |||||||||| |||||||||| |||  | ||  |||||||||    
T  40789227 ttttcctcggcagttaactgcagccgattctttaaaatttcagtaattaactgccaatggacatttgaataatttactcatgtttctcaatcaaaccaaa 40789326  T
Q  275 tgtgggaacaacaat 289  Q
    ||||  |||||||||    
T  40789327 tgtgtcaacaacaat 40789341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 42912896 - 42913018
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||||||| ||||||||| |||||||||   |||| ||||  | || ||| ||||||| ||||| | |||  |||||||||| |||||||  | ||    
T  42912896 agttttcctcggtagttaactgccgccggtttactaaaacttcgacaattaactaccgaagggcatttaaataaaatactcgtgtggcacagccttatca 42912995  T
Q  273 aatgtgggaacaacaattctctt 295  Q
    ||||||  |||| ||||||||||    
T  42912996 aatgtgtaaacagcaattctctt 42913018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 35564276 - 35564211
Alignment:
Q  213 ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtg 278  Q
    ||||| |||| |||||||||| | |||||||||| ||||||||||  | || ||||||||||||||    
T  35564276 ttcggcagttaactgccgaagaatatttgagtaaattactcgtgtttctcaaccaaaccaaatgtg 35564211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 289
Target Start/End: Complemental strand, 35651407 - 35651354
Alignment:
Q  236 catttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaat 289  Q
    ||||||| ||||||||||||||  | |||||||||||||||||  |||||||||    
T  35651407 catttgaataatttactcgtgtttctcagccaaaccaaatgtgtcaacaacaat 35651354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 296
Target Start/End: Complemental strand, 38407183 - 38407130
Alignment:
Q  243 gtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctctta 296  Q
    |||| ||||||||||| |||| ||  | ||||||||||||||||||||||||||    
T  38407183 gtaaattactcgtgtgccacaaccttatcaaatgtgggaacaacaattctctta 38407130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 233
Target Start/End: Original strand, 19037489 - 19037549
Alignment:
Q  174 gttttcctcggcagttaactggcgccgg-tttcacaaaatttcggtagtttactgccgaag 233  Q
    |||||||||||||||||||||  ||||| ||| | |||||||||| |||| ||||||||||    
T  19037489 gttttcctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccgaag 19037549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 19228551 - 19228614
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaaga-tttggtgaagatcggagagaaattgagaattttg 124  Q
    ||||||||||||||||||||||||| | || |||||||||||| ||| |||| ||||||| ||||    
T  19228551 gttgatttgcttgcaattcgtgaaa-atgattttggtgaagattggaaagaatttgagaagtttg 19228614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 247 - 295
Target Start/End: Original strand, 39743241 - 39743289
Alignment:
Q  247 tttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctctt 295  Q
    |||||| ||||| |||||||  | |||||||||||||||||||||||||    
T  39743241 tttactagtgtggcacagccttatcaaatgtgggaacaacaattctctt 39743289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 4e-42; HSPs: 100)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 40354811 - 40354692
Alignment:
Q  19 gtctagtcaaacctgaacactactatataatataagtgtgtcgttgatttgcttgcaattcgt-gaaagaag-atttggtgaagatcggagagaaattga 116  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||| |||||| |||||||||||||    
T  40354811 gtctagtcaaacctgaacactactatataatataagtgtgccgttgatttgcttgcaattcgtagaaagaagtatttggcgaagattggagagaaattga 40354712  T
Q  117 gaattttgtgaagttttgga 136  Q
    ||||||| ||||||||||||    
T  40354711 gaattttttgaagttttgga 40354692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 3408259 - 3408379
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaa-tttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| |||||||| ||||||| |||||| ||||||||| |||||| |||||||||||||||||||||||  ||| ||||||||    
T  3408259 gttttcctcggcagttaactgccgccggttgcacaaaaatttcggcagtttactgtcgaagggcatttgagtaatttactcgtgtggtacaaccaaacca 3408358  T
Q  273 aatgtgggaacaacaattctc 293  Q
    |||||||||||||||||||||    
T  3408359 aatgtgggaacaacaattctc 3408379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 175 - 293
Target Start/End: Original strand, 26792264 - 26792383
Alignment:
Q  175 ttttcctcggcagttaactggcgccggttt-cacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaa 273  Q
    |||||||||||||||||||| ||||||||| |  |||| ||||| |||| | ||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  26792264 ttttcctcggcagttaactgccgccggtttactaaaaacttcggcagttaattgccgaagggcatttgagtaatttactcgtgtggcacagccaaaccaa 26792363  T
Q  274 atgtgggaacaacaattctc 293  Q
    ||||||||||||||||||||    
T  26792364 atgtgggaacaacaattctc 26792383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 174 - 294
Target Start/End: Complemental strand, 26932638 - 26932517
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtt-tcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||  |||||||| ||  |||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  26932638 gttttcctcggcagttaactaccgccggttgtctaaaaacttcggcagtttactaccgaaggacatttgagtaatttactcgtgtgacacagccaaacta 26932539  T
Q  273 aatgtgggaacaacaattctct 294  Q
     ||||||||||| |||||||||    
T  26932538 tatgtgggaacagcaattctct 26932517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 173 - 296
Target Start/End: Complemental strand, 55587410 - 55587290
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  |||||||||| ||   ||||| |||| ||||||||||| |||||| |||| ||||||||||| || ||||||||||    
T  55587410 agttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgaagggcatttgggtaaattactcgtgtggcatagccaaacca 55587314  T
Q  273 aatgtgggaacaacaattctctta 296  Q
    ||||||||||||||||||||||||    
T  55587313 aatgtgggaacaacaattctctta 55587290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 14201548 - 14201665
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  |||||||||| ||   ||||| |||| |||||||| || ||||||||||||||||||||||| || ||||||||||    
T  14201548 agttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcatagccaaacca 14201644  T
Q  273 aatgtgggaacaacaattctc 293  Q
    |||||||||||| ||||||||    
T  14201645 aatgtgggaacagcaattctc 14201665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 23221688 - 23221805
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  |||||||||| ||   ||||| |||| ||||||||||| ||||||| ||| ||||||||||| || ||||||||||    
T  23221688 agttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgaagggcatttgaataaattactcgtgtggcatagccaaacca 23221784  T
Q  273 aatgtgggaacaacaattctc 293  Q
    |||||||||||||||||||||    
T  23221785 aatgtgggaacaacaattctc 23221805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 51037486 - 51037606
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||| ||  ||||  ||   |||| ||||| |||| |||||||| |||||||||||||||||||||||||| ||||||||||| |    
T  51037486 agttttcctcggcagttaattgcagccgtatttctaaaacttcggcagttaactgccgagggacatttgagtaatttactcgtgtggcacagccaaacta 51037585  T
Q  273 aatgtgggaacaacaattctc 293  Q
    |||||||||||||||||||||    
T  51037586 aatgtgggaacaacaattctc 51037606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 21022907 - 21023026
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaa 273  Q
    |||||||||||||||||||||  ||||  ||   |||| ||||| |||| |||||||| || ||||||||||||||||||||||| ||||||||||||||    
T  21022907 gttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaaccaa 21023006  T
Q  274 atgtgggaacaacaattctc 293  Q
    ||||||||||| ||||||||    
T  21023007 atgtgggaacagcaattctc 21023026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 173 - 294
Target Start/End: Original strand, 55588305 - 55588423
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  |||||||||| ||   ||||| |||| ||||||||||| |||||| |||| ||||||||||| || ||||||||||    
T  55588305 agttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgaagggcatttgggtaaattactcgtgtggcatagccaaacca 55588401  T
Q  273 aatgtgggaacaacaattctct 294  Q
    |||||||||||| |||||||||    
T  55588402 aatgtgggaacagcaattctct 55588423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 176 - 293
Target Start/End: Complemental strand, 31242268 - 31242150
Alignment:
Q  176 tttcctcggcagttaactggcgccggttt-cacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaa 274  Q
    ||||||||||||||||||| ||||||||| |  |||| ||||| |||| ||||||||||| ||||||||||||||||||||||| ||||| |||| ||||    
T  31242268 tttcctcggcagttaactgccgccggtttactaaaaacttcggcagttaactgccgaagggcatttgagtaatttactcgtgtggcacagtcaaatcaaa 31242169  T
Q  275 tgtgggaacaacaattctc 293  Q
    |||||| ||| ||||||||    
T  31242168 tgtgggcacagcaattctc 31242150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 38368283 - 38368166
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  |||||||||| ||   ||||| |||| ||||||||||||||||||  ||| ||||||||||| || |||||||| |    
T  38368283 agttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgaaggacatttggataaattactcgtgtggcatagccaaacta 38368187  T
Q  273 aatgtgggaacaacaattctc 293  Q
    |||||||||||||||||||||    
T  38368186 aatgtgggaacaacaattctc 38368166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 18884522 - 18884642
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||| |||||||||||||||  ||||||||  ||||||||||| |||| |||||||| || ||||||||||||||||||||||  | |||||||||||    
T  18884522 agtttttctcggcagttaactgcagccggtttttcaaaatttcggcagttaactgccgaggggcatttgagtaatttactcgtgtttctcagccaaacca 18884621  T
Q  273 aatgtgggaacaacaattctc 293  Q
    ||||||  |||| ||||||||    
T  18884622 aatgtgtcaacatcaattctc 18884642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 174 - 298
Target Start/End: Original strand, 30726760 - 30726885
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaa-tttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||||||||||||||||  |||||||||  |||| |||||| |||||||| |||||||||||||  ||| |||||||||||| |||| ||| || |    
T  30726760 gttttcctcggcagttaactgctgccggtttcctaaaaatttcggcagtttactaccgaaggacatttccgtattttactcgtgtggcacatccatacta 30726859  T
Q  273 aatgtgggaacaacaattctcttata 298  Q
     ||||||||||| |||||||||||||    
T  30726860 tatgtgggaacagcaattctcttata 30726885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 174 - 290
Target Start/End: Complemental strand, 20208564 - 20208448
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaa 273  Q
    |||||||||||||||||||||  |||||||  |  ||| ||||| |||| |||||||| |||||||||||||||||||||||||  | ||||||||||||    
T  20208564 gttttcctcggcagttaactgcagccggttctagtaaacttcggcagttaactgccgagggacatttgagtaatttactcgtgtttctcagccaaaccaa 20208465  T
Q  274 atgtgggaacaacaatt 290  Q
    |||||  ||||||||||    
T  20208464 atgtgtcaacaacaatt 20208448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 23220733 - 23220613
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||| ||||||||||||||  ||||  ||   |||| ||||| |||| |||||| ||||  |||||||||||||||||||||| |||||||||||||    
T  23220733 agttttcatcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccaaagggtatttgagtaatttactcgtgtggcacagccaaacca 23220634  T
Q  273 aatgtgggaacaacaattctc 293  Q
    || ||||||||||||||||||    
T  23220633 aaagtgggaacaacaattctc 23220613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 31425337 - 31425457
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| |||||||| |  ||||  ||||||||   |||||||||||||||||  ||| |||||||||||| ||||||||||| |    
T  31425337 gttttcctcggcagttaactgccgccggttgcctaaaaacttcggtagcaaactgccgaaggacattttcgtattttactcgtgtggcacagccaaacaa 31425436  T
Q  273 aatgtgggaacaacaattctc 293  Q
     ||||||||||||||||||||    
T  31425437 catgtgggaacaacaattctc 31425457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 54634034 - 54634154
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||||  ||||  ||||| |||||||| ||||||| |||||  |||| ||||||||||| |||||||| ||||    
T  54634034 gttttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccatacca 54634133  T
Q  273 aatgtgggaacaacaattctc 293  Q
     ||||||||||| ||||||||    
T  54634134 tatgtgggaacagcaattctc 54634154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 40832698 - 40832581
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||||| |||||||||||  |||||||||| ||   || || |||| |||||||| || ||||||| ||||||||||||||| || ||||||||||    
T  40832698 agttttcctcagcagttaactgcagccggtttcataa---tttggcagttaactgccgaggggcatttgaataatttactcgtgtggcatagccaaacca 40832602  T
Q  273 aatgtgggaacaacaattctc 293  Q
    |||||||||||| ||||||||    
T  40832601 aatgtgggaacagcaattctc 40832581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 46253538 - 46253421
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  |||||||||| ||   ||||| |||| |||||||| || ||||||||||||||||||||||| |||| |||||| |    
T  46253538 agttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgatgggcatttgagtaatttactcgtgtggcacaaccaaacta 46253442  T
Q  273 aatgtgggaacaacaattctc 293  Q
     |||||||||||  |||||||    
T  46253441 tatgtgggaacagtaattctc 46253421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 173 - 294
Target Start/End: Original strand, 40833628 - 40833749
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  ||||  ||   |||| ||||| |||| |||||||| ||  |||||||||||||||||||||| ||||||||||  |    
T  40833628 agttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagccaaagta 40833727  T
Q  273 aatgtgggaacaacaattctct 294  Q
    || |||||||||||||||||||    
T  40833728 aaagtgggaacaacaattctct 40833749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 177 - 293
Target Start/End: Original strand, 49169119 - 49169236
Alignment:
Q  177 ttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaat 275  Q
    |||||||||||||||||| ||||||||||  ||||  ||||||||   |||||||||||||||||  ||| |||||||||||| ||||||||||| | ||    
T  49169119 ttcctcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaaggacattttcgtattttactcgtgtggcacagccaaacaacat 49169218  T
Q  276 gtgggaacaacaattctc 293  Q
    ||||||||| ||||||||    
T  49169219 gtgggaacagcaattctc 49169236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 173 - 290
Target Start/End: Complemental strand, 50447063 - 50446946
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||| ||||||||||  ||||  ||   |||| ||||| |||| ||||||||||  ||||||||||||||||| || |||||||| |||||||    
T  50447063 agttttcctcgacagttaactgcagccgtatttttaaaacttcggcagttaactgccgaagagcatttgagtaatttacttgtatgacacagtcaaacca 50446964  T
Q  273 aatgtgggaacaacaatt 290  Q
    ||||||||||||||||||    
T  50446963 aatgtgggaacaacaatt 50446946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 174 - 293
Target Start/End: Complemental strand, 37563119 - 37562999
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||||||||||||| || ||||||||||  ||||  ||||||||   ||||||||||| |||||  ||| |||||||||||||||||||||||| |    
T  37563119 gttttcctcggcagttaattgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtgacacagccaaacaa 37563020  T
Q  273 aatgtgggaacaacaattctc 293  Q
     ||||||||||| ||||||||    
T  37563019 catgtgggaacagcaattctc 37562999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 174 - 293
Target Start/End: Complemental strand, 52529267 - 52529147
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||| ||||  ||||  ||||| |||||||| ||||||| |||||  |||| ||||||||||| |||||||| ||||    
T  52529267 gttttcctcggcagttaactgccgccgatttcctaaaaacttcggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccatacca 52529168  T
Q  273 aatgtgggaacaacaattctc 293  Q
     ||||||||||| ||||||||    
T  52529167 tatgtgggaacagcaattctc 52529147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 6178328 - 6178241
Alignment:
Q  43 atataatataagtgtgtcgttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagt 130  Q
    |||||||||||||||  |||||||||||| |||||||||||||||||| |||| ||||||  ||||||| ||||||| ||||||||||    
T  6178328 atataatataagtgtcccgttgatttgctcgcaattcgtgaaagaagaattggcgaagatttgagagaacttgagaactttgtgaagt 6178241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 41795574 - 41795487
Alignment:
Q  43 atataatataagtgtgtcgttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagt 130  Q
    |||||||||||||||  |||||||||||| |||||||||||||||||| |||| ||||||  ||||||| ||||||| ||||||||||    
T  41795574 atataatataagtgtcccgttgatttgctcgcaattcgtgaaagaagaattggcgaagatttgagagaacttgagaactttgtgaagt 41795487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 49093939 - 49094026
Alignment:
Q  43 atataatataagtgtgtcgttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagt 130  Q
    |||||||||||||||  |||||||||||| |||||||||||||||||| |||| ||||||  ||||||| ||||||| ||||||||||    
T  49093939 atataatataagtgtcccgttgatttgctcgcaattcgtgaaagaagaattggcgaagatttgagagaacttgagaactttgtgaagt 49094026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 54633867 - 54633744
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacc 271  Q
    |||||||||||||||||||||| ||||||||||  ||||  ||||||||   ||||||||||| |||||  ||| |||||||||||| ||||| |||||     
T  54633867 agttttcctcggcagttaactgccgccggtttcctaaaaccttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagtcaaaca 54633768  T
Q  272 aaatgtgggaacaacaattctctt 295  Q
    | ||||||||||| ||||||||||    
T  54633767 acatgtgggaacagcaattctctt 54633744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 294
Target Start/End: Original strand, 37563299 - 37563420
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||||  ||||  ||||  |||||||| ||||||| |||||  |||| ||||||||||| |||||||  ||||    
T  37563299 gttttcctcggcagttaactgccgccggtttcctaaaaacttcgacagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccttacca 37563398  T
Q  273 aatgtgggaacaacaattctct 294  Q
     ||||||||||| |||||||||    
T  37563399 tatgtgggaacagcaattctct 37563420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 1089603 - 1089723
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||| ||||||| ||||||||||  ||||  ||||||||   ||||||||||| |||||  ||| |||||||||||| |||||||| || |    
T  1089603 gttttcctcggcatttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccatacta 1089702  T
Q  273 aatgtgggaacaacaattctc 293  Q
     ||||||||||||||||||||    
T  1089703 tatgtgggaacaacaattctc 1089723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 219 - 295
Target Start/End: Original strand, 7485725 - 7485801
Alignment:
Q  219 agtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctctt 295  Q
    |||| |||||||| || |||||| |||| ||||||||||| || |||||||||||||||||||||||||||||||||    
T  7485725 agttaactgccgaggggcatttgggtaaattactcgtgtggcatagccaaaccaaatgtgggaacaacaattctctt 7485801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 38369200 - 38369320
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  ||||  ||   |||| ||||| |||| |||||||||||  ||||||||||||||||||| || |||||||||||||    
T  38369200 agttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaagggtatttgagtaatttactcgtatggcacagccaaacca 38369299  T
Q  273 aatgtgggaacaacaattctc 293  Q
    || ||| ||| | ||||||||    
T  38369300 aaagtgagaatagcaattctc 38369320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 173 - 277
Target Start/End: Original strand, 48807404 - 48807508
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||||| |||||||||||  |||||||    |||||||||  |||| |||||||| |||||||||||||||||||||||||  | |||||||||||    
T  48807404 agttttcctcagcagttaactgcagccggttctttaaaatttcgacagttaactgccgagggacatttgagtaatttactcgtgtttctcagccaaacca 48807503  T
Q  273 aatgt 277  Q
    |||||    
T  48807504 aatgt 48807508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 1089463 - 1089525
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    ||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||    
T  1089463 ttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgagaattttg 1089525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 236 - 294
Target Start/End: Original strand, 29307543 - 29307601
Alignment:
Q  236 catttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctct 294  Q
    ||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||    
T  29307543 catttgagtaatttactcgtgtggcacaaccaaaccaaatgtgagaacaacaattctct 29307601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 30726620 - 30726682
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    ||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||    
T  30726620 ttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgagaattttg 30726682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 40358160 - 40358222
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    ||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||    
T  40358160 ttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgagaattttg 40358222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 295
Target Start/End: Original strand, 41800956 - 41801078
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcac-aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||| ||||||| |||||| ||||||||||   |||| ||||||||   ||||||||| ||||||| | || ||||||||||||||||||||| || |    
T  41800956 gttttcttcggcagctaactgccgccggtttccttaaaacttcggtagcaaactgccgaatgacattttaatattttactcgtgtgacacagccatacta 41801055  T
Q  273 aatgtgggaacaacaattctctt 295  Q
     ||||||||||| ||||||||||    
T  41801056 tatgtgggaacagcaattctctt 41801078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 174 - 282
Target Start/End: Original strand, 40358299 - 40358408
Alignment:
Q  174 gttttcctcggcagttaactggcgccggttt-cacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||| || |||| ||||||||   |||| |||||| |||||  ||| |||||||||||| ||||||||||| |    
T  40358299 gttttcctcggcagttaactgccgccggtttccaaaaaacttcggtagcaaactgtcgaagggcattttcgtattttactcgtgtggcacagccaaacaa 40358398  T
Q  273 aatgtgggaa 282  Q
     |||||||||    
T  40358399 catgtgggaa 40358408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 14200616 - 14200496
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  ||||  ||   |||| ||||  |||| |||||||| ||| ||||||||||||||||||||||| |||||||||  |    
T  14200616 agttttcctcggcagttaactgcagccgtatttctaaaacttcgacagttaactgccgagggatatttgagtaatttactcgtgtgatacagccaaagta 14200517  T
Q  273 aatgtgggaacaacaattctc 293  Q
    || ||| ||||| ||||||||    
T  14200516 aaagtgagaacagcaattctc 14200496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 46254466 - 46254586
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  ||||  ||   |||| ||||| |||| ||| ||||  || |||||| ||||||||| ||||| ||||||||||| |    
T  46254466 agttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactaccgagagatatttgaataatttacttgtgtggcacagccaaacta 46254565  T
Q  273 aatgtgggaacaacaattctc 293  Q
    || ||||||||||||||||||    
T  46254566 aaagtgggaacaacaattctc 46254586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 293
Target Start/End: Complemental strand, 49090512 - 49090381
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaactggcgccggttt-cacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgac 260  Q
    |||||||||||||||| |||||| ||||  ||| ||||||||  | ||||| ||||| |||| ||||||||||| |||||  ||| |||||||||||| |    
T  49090512 tggttatgttcagttt-cctcggtagtttgctgccgccggttcactcaaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggc 49090414  T
Q  261 acagccaaaccaaatgtgggaacaacaattctc 293  Q
    ||||||| || | ||||||||||| ||||||||    
T  49090413 acagccatactatatgtgggaacagcaattctc 49090381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 61 - 124
Target Start/End: Complemental strand, 50274928 - 50274865
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    |||||||||||||||||||||||||   |||||||||||||| |||||||||||| ||||||||    
T  50274928 gttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgtgaattttg 50274865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 1308993 - 1309055
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    ||||||||||||||||||||||||   |||||||||||||| |||||||| ||||||||||||    
T  1308993 ttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaatttgagaattttg 1309055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 207 - 293
Target Start/End: Original strand, 6181844 - 6181930
Alignment:
Q  207 caaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    ||||| ||||| |||| ||||||||||| |||||  ||| |||||||||||| |||||||| || | ||||||||||||||||||||    
T  6181844 caaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacaacaattctc 6181930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 7484781 - 7484665
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||| ||||||||||| |||  |||||||||| ||   ||||| |||| |||||||| || ||||||  ||| ||||||||||| || ||||||||||    
T  7484781 agtttttctcggcagtta-ctgcagccggtttcataa---ttcggcagttaactgccgaggggcatttggataaattactcgtgtggcatagccaaacca 7484686  T
Q  273 aatgtgggaacaacaattctc 293  Q
    |||||||||||| ||||||||    
T  7484685 aatgtgggaacatcaattctc 7484665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 178 - 299
Target Start/End: Original strand, 13182121 - 13182243
Alignment:
Q  178 tcctcggcagttaactggcgccggttt-cacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatg 276  Q
    ||||||| ||||  ||| ||||||||| | ||||| ||||  |||| ||||||||| | |||||  ||| |||||||||||| |||||||| || | |||    
T  13182121 tcctcggtagtttgctgccgccggtttactcaaaacttcgacagttaactgccgaaaggcattttggtattttactcgtgtggcacagccatactatatg 13182220  T
Q  277 tgggaacaacaattctcttatat 299  Q
    |||||||||||||||||||||||    
T  13182221 tgggaacaacaattctcttatat 13182243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 275
Target Start/End: Complemental strand, 27872434 - 27872332
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||| |||||||||||| |  |||||||    |||||||||| |||| |||||||| ||| |||||||||||||||||||||  | |||||||||||    
T  27872434 agttttcttcggcagttaacggaagccggttctttaaaatttcggcagttaactgccgatggatatttgagtaatttactcgtgtttctcagccaaacca 27872335  T
Q  273 aat 275  Q
    |||    
T  27872334 aat 27872332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 30723180 - 30723054
Alignment:
Q  169 gttcagttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagcca 267  Q
    |||||| |||||||||||||||| || || |||||||  ||||  ||||||||   ||| ||||||| |||||  ||| |||||||||||| ||||||||    
T  30723180 gttcagatttcctcggcagttaattgccgtcggtttcctaaaaacttcggtagcaaactaccgaagggcattttcgtattttactcgtgtggcacagcca 30723081  T
Q  268 aaccaaatgtgggaacaacaattctct 294  Q
    ||| | ||||||||||| |||||||||    
T  30723080 aacaacatgtgggaacagcaattctct 30723054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 39773458 - 39773364
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagcca 267  Q
    |||||||||||||||||||||  |||||||||  ||||  ||||| |||||||| |||||||||||||  |||| ||||||||||| ||||||||    
T  39773458 gttttcctcggcagttaactgctgccggtttcctaaaaacttcggcagtttactaccgaaggacatttccgtaacttactcgtgtggcacagcca 39773364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 61 - 123
Target Start/End: Original strand, 55407670 - 55407732
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaatttt 123  Q
    |||||||||||||||||||||||||   | |||||||||||| ||||||||||||||||||||    
T  55407670 gttgatttgcttgcaattcgtgaaaatggttttggtgaagattggagagaaattgagaatttt 55407732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 219 - 295
Target Start/End: Complemental strand, 18411207 - 18411131
Alignment:
Q  219 agtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctctt 295  Q
    |||||||||||||  ||||||||| ||||||||||||||  | |||||||||||||||||  |||||||||| ||||    
T  18411207 agtttactgccgagagacatttgaataatttactcgtgtttctcagccaaaccaaatgtgtcaacaacaattttctt 18411131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 21022768 - 21022828
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattt 122  Q
    ||||||||||||||||||||||||   |||||||||||||| |||||| ||||||||||||    
T  21022768 ttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagcaattgagaattt 21022828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 173 - 289
Target Start/End: Original strand, 43176646 - 43176762
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  || ||||    |||||||||| |||| |||| ||||||  ||||  |||| ||||||||||  | |||||||||||    
T  43176646 agttttcctcggcagttaactgcagcaggttctttaaaatttcggcagttaactgtcgaagggtatttaggtaaattactcgtgtttctcagccaaacca 43176745  T
Q  273 aatgtgggaacaacaat 289  Q
    |||||| ||||||||||    
T  43176746 aatgtgtgaacaacaat 43176762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 61 - 119
Target Start/End: Complemental strand, 8109587 - 8109529
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaa 119  Q
    |||||||||||||||||||||||||    ||||||||||||| ||||||||||||||||    
T  8109587 gttgatttgcttgcaattcgtgaaaatgaatttggtgaagattggagagaaattgagaa 8109529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 293
Target Start/End: Complemental strand, 21015748 - 21015674
Alignment:
Q  219 agtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||| |||||||| ||  ||||||||||||||||||| || |||| ||||||||||| || ||||||||||||||    
T  21015748 agttaactgccgaggggtatttgagtaatttactcgtatggcacaaccaaaccaaatatgagaacaacaattctc 21015674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 175 - 289
Target Start/End: Complemental strand, 48806538 - 48806424
Alignment:
Q  175 ttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaa 274  Q
    ||||||||||||||||||||  |||||||    |||||||||  |||| ||||||||| |  |||||  ||| ||||||||||  | |||||||||||||    
T  48806538 ttttcctcggcagttaactgcagccggttctttaaaatttcgacagttaactgccgaaaggtatttggataaattactcgtgtttctcagccaaaccaaa 48806439  T
Q  275 tgtgggaacaacaat 289  Q
    |||| ||||||||||    
T  48806438 tgtgtgaacaacaat 48806424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 258
Target Start/End: Original strand, 28235579 - 28235664
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtg 258  Q
    |||||||||||||||||||||| |||||||||   |||| ||||| |||| ||||||||||| |||||  ||||  ||||||||||    
T  28235579 agttttcctcggcagttaactgccgccggtttactaaaacttcggcagttaactgccgaagggcattttcgtaaaatactcgtgtg 28235664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 181 - 294
Target Start/End: Complemental strand, 41793377 - 41793264
Alignment:
Q  181 tcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtggg 280  Q
    ||||||||||| || ||||||||||  ||||  |||||||   |||||||| || |||||  ||| ||||||||| || ||||||||||| | |||||||    
T  41793377 tcggcagttaattgccgccggtttctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtatggcacagccaaactatatgtggg 41793278  T
Q  281 aacaacaattctct 294  Q
    |||| |||||||||    
T  41793277 aacagcaattctct 41793264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 170 - 293
Target Start/End: Complemental strand, 53536047 - 53535927
Alignment:
Q  170 ttcagttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaa 269  Q
    ||||||||||||||  |||||||||  ||||||| || ||   ||||| |||| ||||||||||| ||||| ||||| ||||| |||||||||||||||     
T  53536047 ttcagttttcctcgatagttaactgcagccggttccataa---ttcggcagttaactgccgaagggcattttagtaaattactagtgtgacacagccaat 53535951  T
Q  270 ccaaatgtgggaacaacaattctc 293  Q
     || |||||  |||| ||||||||    
T  53535950 gcatatgtgtcaacagcaattctc 53535927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 13173284 - 13173168
Alignment:
Q  178 tcctcggcagttaactggcgccggtttca-caaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatg 276  Q
    ||||||| ||||  ||| ||||||||| | ||||| ||||| |||| |||| |||||| |||||  ||| |||||||||||| |||||||| || | |||    
T  13173284 tcctcggtagtttgctgccgccggtttaatcaaaacttcggcagttaactgtcgaagggcattttggtattttactcgtgtggcacagccatactatatg 13173185  T
Q  277 tgggaacaacaattctc 293  Q
    |||||||| ||||||||    
T  13173184 tgggaacatcaattctc 13173168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 289
Target Start/End: Original strand, 37856762 - 37856878
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||  ||||||  |||||||    |||||||||| |||| |||||| ||||| ||||  |||| ||||||||||  |  ||||||||||    
T  37856762 agttttcctcggcacctaactgcagccggttctttaaaatttcggcagttaactgccaaaggatatttaggtaaattactcgtgtttcttagccaaacca 37856861  T
Q  273 aatgtgggaacaacaat 289  Q
    |||||| ||||||||||    
T  37856862 aatgtgtgaacaacaat 37856878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 293
Target Start/End: Original strand, 49096378 - 49096490
Alignment:
Q  181 tcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtggg 280  Q
    |||||||||||||| |||| ||| |  ||||  |||||||   ||||||||||| |||||  ||| |||||||||||| |||| |||||| | |||||||    
T  49096378 tcggcagttaactgccgccagttcctaaaaacctcggtagcaaactgccgaagggcattttggtattttactcgtgtggcacaaccaaactatatgtggg 49096477  T
Q  281 aacaacaattctc 293  Q
    |||| ||||||||    
T  49096478 aacagcaattctc 49096490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 186 - 296
Target Start/End: Complemental strand, 30704060 - 30703950
Alignment:
Q  186 agttaactggcgccggtttc-acaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaaca 284  Q
    |||||||||  ||||||||| ||||||||| || |||| ||||||||| | ||||| ||||| ||||||||||| | ||||| |||||||||||  ||||    
T  30704060 agttaactgcagccggtttccacaaaattt-ggcagttaactgccgaatggcatttaagtaaattactcgtgtgtctcagcctaaccaaatgtgtcaaca 30703962  T
Q  285 acaattctctta 296  Q
     ||||| |||||    
T  30703961 tcaattttctta 30703950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 295
Target Start/End: Original strand, 40061182 - 40061301
Alignment:
Q  176 tttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaat 275  Q
    ||||||||| |||||||||   |||||||   |||| |||||  ||| |||||||| || |||||  |||| ||||||||||| | ||||||||||||||    
T  40061182 tttcctcggtagttaactgcaaccggttttctaaaacttcggcggttaactgccgatgggcatttaggtaaattactcgtgtgtctcagccaaaccaaat 40061281  T
Q  276 gtgggaacaacaattctctt 295  Q
     ||  |||||||||||||||    
T  40061282 atgtcaacaacaattctctt 40061301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 293
Target Start/End: Complemental strand, 1087912 - 1087794
Alignment:
Q  176 tttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaa 274  Q
    ||||||||||||||||||| ||||| ||||  ||||  ||||||||   ||||||||||| |||||  ||| ||||||  |||| |||||||| || | |    
T  1087912 tttcctcggcagttaactgccgccgatttcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactgatgtggcacagccatactata 1087813  T
Q  275 tgtgggaacaacaattctc 293  Q
    |||||||||| ||||||||    
T  1087812 tgtgggaacagcaattctc 1087794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 294
Target Start/End: Complemental strand, 6175850 - 6175780
Alignment:
Q  224 actgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctct 294  Q
    |||||||| || |||||  ||| |||||||||||| ||||||||||| | |||||||||||||||| ||||    
T  6175850 actgccgaggggcattttggtattttactcgtgtggcacagccaaactatatgtgggaacaacaatactct 6175780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 263
Target Start/End: Original strand, 16473698 - 16473788
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacaca 263  Q
    |||||||||||| ||||||||| |||||||||   |||| ||||| |||| ||||||||||| |||||  ||||  |||||||||| ||||    
T  16473698 agttttcctcggtagttaactgccgccggtttactaaaacttcggcagttaactgccgaagggcattttcgtaaagtactcgtgtggcaca 16473788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 294
Target Start/End: Original strand, 26933319 - 26933405
Alignment:
Q  208 aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctct 294  Q
    |||||||||  |||||||| ||||||  ||||||| ||||||||||||||| |||| |||||| | | ||| ||||| |||||||||    
T  26933319 aaaatttcgacagtttactaccgaagagcatttgattaatttactcgtgtggcacaaccaaactacacgtgcgaacatcaattctct 26933405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 55799653 - 55799699
Alignment:
Q  247 tttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||||||||||| ||||||||||| | ||||||||||||||||||||    
T  55799653 tttactcgtgtggcacagccaaacaacatgtgggaacaacaattctc 55799699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 181 - 294
Target Start/End: Original strand, 3186090 - 3186203
Alignment:
Q  181 tcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtggg 280  Q
    |||||||||||||| |||||||||   |||| ||| | |||| |||| ||||||||||||  ||||  |||||||||| |||||||  | ||||||||      
T  3186090 tcggcagttaactgccgccggtttactaaaacttctgcagttaactgtcgaaggacatttaggtaaaatactcgtgtggcacagccttatcaaatgtgta 3186189  T
Q  281 aacaacaattctct 294  Q
    |||| |||||||||    
T  3186190 aacagcaattctct 3186203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 173 - 294
Target Start/End: Complemental strand, 11565921 - 11565800
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||| ||||||||||  |||||||    | |||||||| | || || ||| || ||||||||| ||||||||||||||  |  ||||||||||    
T  11565921 agttttcctcgacagttaactgcagccggttctttagaatttcggcaattaaccgccaaaagacatttgaataatttactcgtgtttctaagccaaacca 11565822  T
Q  273 aatgtgggaacaacaattctct 294  Q
    ||||||  ||||||||| ||||    
T  11565821 aatgtgtcaacaacaatactct 11565800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 242 - 295
Target Start/End: Original strand, 39773629 - 39773682
Alignment:
Q  242 agtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctctt 295  Q
    |||| |||||||||||| ||||||||||| | ||||||||||| ||||||||||    
T  39773629 agtattttactcgtgtggcacagccaaacaacatgtgggaacagcaattctctt 39773682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 208 - 293
Target Start/End: Complemental strand, 40352385 - 40352300
Alignment:
Q  208 aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||| ||||| |||||||| ||||||  |||||  ||| |||||||||||| |||| ||| || | ||||||||||||||||||||    
T  40352385 aaaacttcggcagtttactaccgaagagcattttcgtattttactcgtgtggcacaaccatactatatgtgggaacaacaattctc 40352300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 51683400 - 51683332
Alignment:
Q  55 tgtgtcgttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    ||||| ||||||||||||||||||||||||| | | |||||||||||| ||| |||| ||||||| ||||    
T  51683400 tgtgtagttgatttgcttgcaattcgtgaaa-atggtttggtgaagattggaaagaatttgagaagtttg 51683332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 6181772 - 6181804
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaactg 194  Q
    |||||||||||||||||||||||||||||||||    
T  6181772 tggttatgttcagttttcctcggcagttaactg 6181804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 37296239 - 37296287
Alignment:
Q  209 aaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgt 257  Q
    ||||||||| |||| |||| |||||| ||||||||||||||||||||||    
T  37296239 aaatttcggcagttaactgtcgaagggcatttgagtaatttactcgtgt 37296287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 123
Target Start/End: Complemental strand, 67786 - 67724
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaaga-tttggtgaagatcggagagaaattgagaatttt 123  Q
    |||||||| |||||||||||||||| | || ||||||||||||  |||||||||||||||||||    
T  67786 gttgattttcttgcaattcgtgaaa-atgactttggtgaagatttgagagaaattgagaatttt 67724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 8111438 - 8111553
Alignment:
Q  178 tcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgt 277  Q
    ||||||| |||||||||  |||||||||   ||| ||||  | || |||||||| ||||||||   ||| ||||||||||  | ||||||||||||||||    
T  8111438 tcctcggtagttaactgcagccggtttccacaaacttcgacaattaactgccgatggacatttagataaattactcgtgtatctcagccaaaccaaatgt 8111537  T
Q  278 gggaacaacaattctc 293  Q
    |  |||||||||||||    
T  8111538 gtcaacaacaattctc 8111553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 266
Target Start/End: Complemental strand, 46165797 - 46165707
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagcc 266  Q
    |||||||||||| |||||||||  ||||||| || ||   ||||  |||| |||||||||||||||||  |||| ||||| |||||||||||||    
T  46165797 agttttcctcggtagttaactgcagccggttccataa---ttcgacagttaactgccgaaggacatttcggtaaattactagtgtgacacagcc 46165707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 31421756 - 31421640
Alignment:
Q  178 tcctcggcagttaactggcgccggtttcac--aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaat 275  Q
    ||||||| ||||| ||| |||||||| |||  |||| ||||| |||| ||||||||||| |||||  ||| |||||| ||||| |||||||| || | ||    
T  31421756 tcctcggtagttagctgccgccggtt-cactaaaaacttcggcagttaactgccgaagggcattttcgtattttactggtgtggcacagccatactatat 31421658  T
Q  276 gtgggaacaacaattctc 293  Q
    ||| ||||| ||||||||    
T  31421657 gtgagaacagcaattctc 31421640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 37021941 - 37021995
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattg 115  Q
    |||||||||||||| ||||||||||    ||||||||||||| ||||||||||||    
T  37021941 gttgatttgcttgctattcgtgaaaatgaatttggtgaagattggagagaaattg 37021995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 43175754 - 43175684
Alignment:
Q  208 aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtg 278  Q
    |||||||||| || | |||||| |||| |||||||||||||||||| ||   | |||||||||||||||||    
T  43175754 aaaatttcggcagctaactgcctaagggcatttgagtaatttactcatgcttctcagccaaaccaaatgtg 43175684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 294
Target Start/End: Original strand, 50196963 - 50197049
Alignment:
Q  208 aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctct 294  Q
    |||| |||||||||| |||||||| || |||||  |||| ||| ||||||| |  ||||||| ||||||||  ||||||||||||||    
T  50196963 aaaacttcggtagttaactgccgaggggcatttaggtaaattattcgtgtgtcttagccaaatcaaatgtgtcaacaacaattctct 50197049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 243 - 293
Target Start/End: Complemental strand, 50274744 - 50274694
Alignment:
Q  243 gtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||| ||||||||||| |||||||  | |||||||||||||||||||||||    
T  50274744 gtaaattactcgtgtgccacagccctatcaaatgtgggaacaacaattctc 50274694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 292
Target Start/End: Original strand, 1309167 - 1309252
Alignment:
Q  207 caaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattct 292  Q
    ||||| ||||| |||| ||||||||||| |||||  ||| |||||||||||| |||| ||| || | |||||||| || |||||||    
T  1309167 caaaacttcggcagttaactgccgaagggcatttttgtattttactcgtgtggcacaaccatactatatgtgggagcagcaattct 1309252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 257
Target Start/End: Original strand, 2449677 - 2449710
Alignment:
Q  224 actgccgaaggacatttgagtaatttactcgtgt 257  Q
    |||||||| |||||||||||||||||||||||||    
T  2449677 actgccgagggacatttgagtaatttactcgtgt 2449710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 266
Target Start/End: Complemental strand, 3184028 - 3183943
Alignment:
Q  181 tcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagcc 266  Q
    |||||||||||||| |||||||||   |||| ||||| |||| |||| ||||||||||||   |||  |||||||||| |||||||    
T  3184028 tcggcagttaactgccgccggtttactaaaacttcggcagttaactgtcgaaggacatttagataaaatactcgtgtggcacagcc 3183943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 294
Target Start/End: Original strand, 9013927 - 9014008
Alignment:
Q  213 ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctct 294  Q
    ||||| |||| |||||||||||  ||||  |||| ||||||||||| | ||||| |||||||||||  |||| |||||||||    
T  9013927 ttcggcagttaactgccgaagggaatttaggtaaattactcgtgtgtctcagcctaaccaaatgtgtcaacagcaattctct 9014008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 296
Target Start/End: Original strand, 50278887 - 50278940
Alignment:
Q  243 gtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctctta 296  Q
    |||| ||||||||||| |||| ||  | ||||||||||||||||||||||||||    
T  50278887 gtaaattactcgtgtgccacaaccttatcaaatgtgggaacaacaattctctta 50278940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 233
Target Start/End: Original strand, 6178129 - 6178189
Alignment:
Q  174 gttttcctcggcagttaactggcgccgg-tttcacaaaatttcggtagtttactgccgaag 233  Q
    |||||||||||||||||||||  ||||| ||| | |||||||||| |||| ||||||||||    
T  6178129 gttttcctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccgaag 6178189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 190
Target Start/End: Original strand, 9893246 - 9893274
Alignment:
Q  162 tggttatgttcagttttcctcggcagtta 190  Q
    |||||||||||||||||||||||||||||    
T  9893246 tggttatgttcagttttcctcggcagtta 9893274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 15999882 - 15999938
Alignment:
Q  237 atttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    ||||| |||||||||| ||||  | ||||||||| | ||||||||||||||||||||    
T  15999882 atttgggtaatttacttgtgtttctcagccaaacaacatgtgggaacaacaattctc 15999938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 213 - 293
Target Start/End: Original strand, 28322175 - 28322255
Alignment:
Q  213 ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    ||||| |||| ||| |||| |||||||||||||| ||||||||||  | |||||||  || |||||  |||||||||||||    
T  28322175 ttcggcagttaactaccgagggacatttgagtaaattactcgtgtttctcagccaatgcatatgtgtcaacaacaattctc 28322255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 31421798 - 31421766
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaactg 194  Q
    ||||||||| |||||||||||||||||||||||    
T  31421798 tggttatgtccagttttcctcggcagttaactg 31421766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 37855910 - 37855830
Alignment:
Q  177 ttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgt 257  Q
    ||||||||||||||||||  |||||||    |||||||||| |||| |||||||| | | |||| ||||||||| ||||||    
T  37855910 ttcctcggcagttaactgcagccggttctttaaaatttcggaagttaactgccgatgaatatttaagtaatttattcgtgt 37855830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 233
Target Start/End: Original strand, 41795375 - 41795435
Alignment:
Q  174 gttttcctcggcagttaactggcgccgg-tttcacaaaatttcggtagtttactgccgaag 233  Q
    |||||||||||||||||||||  ||||| ||| | |||||||||| |||| ||||||||||    
T  41795375 gttttcctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccgaag 41795435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 233
Target Start/End: Complemental strand, 49094138 - 49094078
Alignment:
Q  174 gttttcctcggcagttaactggcgccgg-tttcacaaaatttcggtagtttactgccgaag 233  Q
    |||||||||||||||||||||  ||||| ||| | |||||||||| |||| ||||||||||    
T  49094138 gttttcctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccgaag 49094078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 233
Target Start/End: Complemental strand, 55793974 - 55793914
Alignment:
Q  174 gttttcctcggcagttaactggcgccgg-tttcacaaaatttcggtagtttactgccgaag 233  Q
    |||||||||||||||||||||  ||||| |||  ||||||||||| |||| ||||||||||    
T  55793974 gttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccgaag 55793914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 86; Significance: 7e-41; HSPs: 3)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 36781 - 36664
Alignment:
Q  19 gtctagtcaaacctgaacactactatataatataagtgtgtcgttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgaga 118  Q
    ||||||||||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||| | ||||  ||||||||||||||    
T  36781 gtctagtcaaatctgaacactactatataatataagtgtcccgttgatttgctcgcaattcgtgaaagaagatttggcggagatttgagagaaattgaga 36682  T
Q  119 attttgtgaagttttgga 136  Q
    ||||||||||||||||||    
T  36681 attttgtgaagttttgga 36664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 40914 - 40976
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    ||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||    
T  40914 ttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgagaattttg 40976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 213 - 293
Target Start/End: Original strand, 41115 - 41195
Alignment:
Q  213 ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||||||||| |||||||||||  |||| |||| |||||||||||| |||||||| || | ||||||||||| ||||||||    
T  41115 ttcggtagttaactgccgaagggtattttagtattttactcgtgtggcacagccatactatatgtgggaacagcaattctc 41195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 3e-40; HSPs: 83)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 15070711 - 15070595
Alignment:
Q  19 gtctagtcaaacctgaacactactatataatataagtgtgtcgttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgaga 118  Q
    ||||||||||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||  ||||||||||||||    
T  15070711 gtctagtcaaatctgaacactactatataatataagtgtcccgttgatttgctcgcaattcgtgaaagaagatttggcgaagatttgagagaaattgaga 15070612  T
Q  119 attttgtgaagttttgg 135  Q
    ||||||||||| |||||    
T  15070611 attttgtgaagatttgg 15070595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 18109793 - 18109913
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| |||||||| |||||||  ||||  |||||||||||||||| ||||||| ||||||||||||||  |||||||||||||    
T  18109793 gttttcctcggcagttaactgccgccggttgcacaaaaacttcgacagtttactgccgaagggcatttgaataatttactcgtgtagcacagccaaacca 18109892  T
Q  273 aatgtgggaacaacaattctc 293  Q
    |||||||||||||||||||||    
T  18109893 aatgtgggaacaacaattctc 18109913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 174 - 295
Target Start/End: Original strand, 10524376 - 10524497
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaa 273  Q
    ||||||||||||||||||||| |  ||||||   |||| ||||  |||| |||||||| || ||||||||||||||||||||||||||||||||||||||    
T  10524376 gttttcctcggcagttaactgccatcggttttctaaaacttcgacagttaactgccgaggggcatttgagtaatttactcgtgtgacacagccaaaccaa 10524475  T
Q  274 atgtgggaacaacaattctctt 295  Q
    ||||||||||||||||||||||    
T  10524476 atgtgggaacaacaattctctt 10524497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 42504776 - 42504693
Alignment:
Q  19 gtctagtcaaacctgaacactactatataatataagtgtgtcgttgatttgcttgcaattcgtgaaagaagatttggtgaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||    
T  42504776 gtctagtcaaacctgaacactactatataatataagtgtcccgttgatttgcttgcaattcgtgaaagaagatttggcgaagat 42504693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 173 - 294
Target Start/End: Complemental strand, 42582167 - 42582049
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  |||||||||| ||   ||||| |||| |||||||| |||||||||||||||||||||||||| || ||||||||||    
T  42582167 agttttcctcggcagttaactgtagccggtttcataa---ttcggcagttaactgccgagggacatttgagtaatttactcgtgtggcatagccaaacca 42582071  T
Q  273 aatgtgggaacaacaattctct 294  Q
    |||||||||||| |||||||||    
T  42582070 aatgtgggaacagcaattctct 42582049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 173 - 294
Target Start/End: Complemental strand, 46907591 - 46907473
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  |||||||||| ||   ||||| |||| ||||||||||| ||||||||||||||||||||||| || ||||||||||    
T  46907591 agttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgaagggcatttgagtaatttactcgtgtggcatagccaaacca 46907495  T
Q  273 aatgtgggaacaacaattctct 294  Q
    |||||||||||| |||||||||    
T  46907494 aatgtgggaacagcaattctct 46907473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 174 - 294
Target Start/End: Original strand, 7975628 - 7975749
Alignment:
Q  174 gttttcctcggcagttaactggcgccggttt-cacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||| |  |||| ||||| ||||||||||||||||||||||  ||||  |||||||||| |||| ||||||||    
T  7975628 gttttcctcggcagttaactgccgccggtttactaaaaacttcggcagtttactgccgaaggacattttcgtaaagtactcgtgtggcacaaccaaacca 7975727  T
Q  273 aatgtgggaacaacaattctct 294  Q
    ||||||||||||||||||||||    
T  7975728 aatgtgggaacaacaattctct 7975749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 173 - 296
Target Start/End: Original strand, 49141639 - 49141759
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  |||||||||| ||   ||| | |||| |||||||| || ||||||||||||||||||||||| || ||||||||||    
T  49141639 agttttcctcggcagttaactgcagccggtttcataa---ttctgcagttaactgccgaggggcatttgagtaatttactcgtgtggcatagccaaacca 49141735  T
Q  273 aatgtgggaacaacaattctctta 296  Q
    ||||||||||||||||||||||||    
T  49141736 aatgtgggaacaacaattctctta 49141759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 174 - 295
Target Start/End: Complemental strand, 10097970 - 10097848
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||||  ||||  ||||||||   |||||||||||||||||  ||| |||||||||||| ||||||||||| |    
T  10097970 gttttcctcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaaggacattttcgtattttactcgtgtggcacagccaaacaa 10097871  T
Q  273 aatgtgggaacaacaattctctt 295  Q
     ||||||||||||||||||||||    
T  10097870 catgtgggaacaacaattctctt 10097848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 12210608 - 12210730
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  ||||  ||   |||| ||||| |||| |||||||| || |||||||||||||||||||| || |||||||||||||    
T  12210608 agttttcctcggcagttaactgcggccgtatttctaaaacttcggcagttaactgccgaggggcatttgagtaatttactcgtatggcacagccaaacca 12210707  T
Q  273 aatgtgggaacaacaattctctt 295  Q
    |||||||||||| ||||||||||    
T  12210708 aatgtgggaacagcaattctctt 12210730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 7124 - 7004
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  ||||  ||   |||| |||||||||| |||||||| || ||||||||||||||||||||||| ||||||||||| |    
T  7124 agttttcctcggcagttaactgcagccgtatttctaaaacttcggtagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaacaa 7025  T
Q  273 aatgtgggaacaacaattctc 293  Q
     ||||||||||| ||||||||    
T  7024 catgtgggaacagcaattctc 7004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 15074247 - 15074367
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaa-aatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||||  || || ||||| |||||||| ||||||| |||||  ||| |||||||||||| |||||||| || |    
T  15074247 gttttcctcggcagttaactgccgccggtttcctaagaacttcggcagtttactaccgaagggcattttcgtattttactcgtgtggcacagccatacta 15074346  T
Q  273 aatgtgggaacaacaattctc 293  Q
     ||||||||||||||||||||    
T  15074347 tatgtgggaacaacaattctc 15074367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 171 - 282
Target Start/End: Original strand, 40928943 - 40929055
Alignment:
Q  171 tcagttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaa 269  Q
    ||||||||||||||||||||||||  ||||||| |||||||  ||||| |||||||||||||| | ||||||||||| ||| ||||||| |||| |||||    
T  40928943 tcagttttcctcggcagttaactgctgccggttgcacaaaaacttcggcagtttactgccgaaaggcatttgagtaaattattcgtgtggcacaaccaaa 40929042  T
Q  270 ccaaatgtgggaa 282  Q
     ||||||||||||    
T  40929043 tcaaatgtgggaa 40929055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 183 - 294
Target Start/End: Original strand, 13921292 - 13921403
Alignment:
Q  183 ggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaa 282  Q
    |||||||||||| ||| || ||   |||| ||||| |||| |||||||| |  ||||||||||||||||||||||| |||| ||||||||||||||||||    
T  13921292 ggcagttaactgccgctggatttctaaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtggcacaaccaaaccaaatgtgggaa 13921391  T
Q  283 caacaattctct 294  Q
    ||||||||||||    
T  13921392 caacaattctct 13921403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 38083816 - 38083741
Alignment:
Q  219 agtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctct 294  Q
    |||| |||||||| || |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  38083816 agttaactgccgaggggcatttgagtaatgtactcgtgtgacacagccaaaccaaatgtggaaacaacaattctct 38083741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 214 - 293
Target Start/End: Original strand, 42795139 - 42795218
Alignment:
Q  214 tcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||| |||| |||||||| ||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  42795139 tcggcagttaactgccgagggatatttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctc 42795218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 174 - 295
Target Start/End: Complemental strand, 603833 - 603711
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||||  ||||  ||||||||   ||||||||||| |||||  ||| |||||||||||| ||||||||||| |    
T  603833 gttttcctcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcattttggtattttactcgtgtggcacagccaaacaa 603734  T
Q  273 aatgtgggaacaacaattctctt 295  Q
     ||||||||||| ||||||||||    
T  603733 catgtgggaacagcaattctctt 603711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 61 - 276
Target Start/End: Complemental strand, 10517175 - 10516971
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagttttggaaaatggggaactct-gttctgtga 159  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||         || |||||||||||||||||||| ||||| ||| |||||| |     
T  10517175 gttgatttgcttgcaattcgtgaaagaagatttggtgaagattggaga---------aaatttgtgaagttttggaaaatagggaagtctggttctgcgt 10517085  T
Q  160 tttggttatgttcagttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtga 259  Q
    | |||||   |   |||||||||| ||||||||||  ||||||||   |||| ||||  |||| |||||| ||| ||||||  ||||  ||||||||||     
T  10517084 tctggtt---tgaggttttcctcgacagttaactgctgccggtttactaaaacttcgacagttaactgccaaagaacattttcgtaaagtactcgtgtgg 10516988  T
Q  260 cacagccaaaccaaatg 276  Q
    |||||||||||||||||    
T  10516987 cacagccaaaccaaatg 10516971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 174 - 295
Target Start/End: Complemental strand, 18105427 - 18105305
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||||  ||||  ||||| |||||||| |||||||||||||  ||| ||||||||||||  || |||| || |    
T  18105427 gttttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaaggacatttccgtattttactcgtgtggtacggccatacta 18105328  T
Q  273 aatgtgggaacaacaattctctt 295  Q
     ||||||||||||||||||||||    
T  18105327 tatgtgggaacaacaattctctt 18105305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 42794248 - 42794131
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  |||||||||| ||   ||||| ||||  ||||||| |  ||||||||||||||||||||||| || || | |||||    
T  42794248 agttttcctcggcagttaactgcagccggtttcataa---ttcggcagttatctgccgaggagcatttgagtaatttactcgtgtggcatagtccaacca 42794152  T
Q  273 aatgtgggaacaacaattctc 293  Q
    |||||||||||||||||||||    
T  42794151 aatgtgggaacaacaattctc 42794131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 175 - 293
Target Start/End: Original strand, 45258024 - 45258142
Alignment:
Q  175 ttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaa 274  Q
    ||||||||||||||||||||  ||||  ||   |||||||  | |||| |||||||| || ||||||||||||||||||||||| |||||||||| ||||    
T  45258024 ttttcctcggcagttaactgcagccgtatttctaaaatttatgcagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaatcaaa 45258123  T
Q  275 tgtgggaacaacaattctc 293  Q
    |||| ||||||||||||||    
T  45258124 tgtgagaacaacaattctc 45258142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 8065 - 8185
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  ||||  ||   |||| ||| |||||| |||||||| || ||||||||||||||||| ||||| ||||||||||| |    
T  8065 agttttcctcggcagttaactgcagccgtatttctaaaacttctgtagttaactgccgaggggcatttgagtaatttacttgtgtggcacagccaaacaa 8164  T
Q  273 aatgtgggaacaacaattctc 293  Q
     ||||||||||| ||||||||    
T  8165 catgtgggaacagcaattctc 8185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 10098136 - 10098256
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||||||||||||||||  |||||||||  ||||  ||||| |||||||| ||||||| |||||  |||| ||||||||||| |||||||| ||||    
T  10098136 gttttcctcggcagttaactgcagccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccatacca 10098235  T
Q  273 aatgtgggaacaacaattctc 293  Q
     ||||||||||| ||||||||    
T  10098236 tatgtgggaacagcaattctc 10098256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 174 - 289
Target Start/End: Original strand, 40141245 - 40141361
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||||  ||||  ||||| |    ||| ||||||| ||||||||||||||||||||||| ||||||||||| |    
T  40141245 gttttcctcggcagttaactgtcgccggtttcctaaaaacttcggcaacaaactaccgaagggcatttgagtaatttactcgtgtggcacagccaaacta 40141344  T
Q  273 aatgtgggaacaacaat 289  Q
     ||||||||||||||||    
T  40141345 tatgtgggaacaacaat 40141361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 17840909 - 17841028
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaa 273  Q
    |||||||||||||||||||||  | ||| ||   |||| ||||| |||| |||||||| | |||||||||||||||||||||||| |||||||||| |||    
T  17840909 gttttcctcggcagttaactgcagtcggatttctaaaacttcggcagttaactgccgatgaacatttgagtaatttactcgtgtggcacagccaaatcaa 17841008  T
Q  274 atgtgggaacaacaattctc 293  Q
    | ||||||| | ||||||||    
T  17841009 acgtgggaatagcaattctc 17841028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 175 - 293
Target Start/End: Original strand, 42508047 - 42508166
Alignment:
Q  175 ttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaa 273  Q
    |||||||| ||||||||||| ||||||||||  ||||  ||||| |||||||| ||||||| |||||  ||| |||||||||||| |||||||| || |     
T  42508047 ttttcctcagcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtattttactcgtgtggcacagccatactat 42508146  T
Q  274 atgtgggaacaacaattctc 293  Q
    ||||||||||||||||||||    
T  42508147 atgtgggaacaacaattctc 42508166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 173 - 290
Target Start/End: Complemental strand, 49140708 - 49140594
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  |||||||||| ||   ||||| |||| |||||||| ||  |||||||||||||||||||||  || | ||||||||    
T  49140708 agttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgaggggtatttgagtaatttactcgtgtagcataaccaaacca 49140612  T
Q  273 aatgtgggaacaacaatt 290  Q
    |||||||||||| |||||    
T  49140611 aatgtgggaacatcaatt 49140594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 43 - 129
Target Start/End: Complemental strand, 9367934 - 9367848
Alignment:
Q  43 atataatataagtgtgtcgttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaag 129  Q
    |||||||||||||||  |||||||||||| |||||||||||||||||| |||| ||||||  ||||||| ||||||| |||||||||    
T  9367934 atataatataagtgtcccgttgatttgctcgcaattcgtgaaagaagaattggcgaagatttgagagaacttgagaactttgtgaag 9367848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 162 - 293
Target Start/End: Complemental strand, 41880580 - 41880448
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaactggcgccggtttcacaa--aatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtga 259  Q
    ||||||||||||||||||||||| ||| | ||| |||||||| ||| |  || |||||||||| ||||||||||| |||||  ||| ||||||||||||     
T  41880580 tggttatgttcagttttcctcggtagtaagctgccgccggtt-cactacaaacttcggtagttaactgccgaagggcattttcgtattttactcgtgtgg 41880482  T
Q  260 cacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||| ||| || | ||||||||||||||||||||    
T  41880481 cacaaccatactatatgtgggaacaacaattctc 41880448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 41884145 - 41884271
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||||  ||||  ||||||||   |||||||||||||||||  ||| |||||||||||| |||||||| || |    
T  41884145 gttttcctcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaaggacattttcgtattttactcgtgtggcacagccacacaa 41884244  T
Q  273 aatgtgggaacaacaattctcttatat 299  Q
     ||||||||| | ||||||||| ||||    
T  41884245 catgtgggaatagcaattctctaatat 41884271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 176 - 293
Target Start/End: Complemental strand, 27657090 - 27656973
Alignment:
Q  176 tttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaat 275  Q
    |||||||||||||||||||  ||||  ||   |||| || || |||| |||||||| || ||||||| ||||||||||||||| |||| |||||||||||    
T  27657090 tttcctcggcagttaactgcagccgtatttctaaaactttggcagttaactgccgaggggcatttgaataatttactcgtgtggcacaaccaaaccaaat 27656991  T
Q  276 gtgggaacaacaattctc 293  Q
    ||||||||| ||||||||    
T  27656990 gtgggaacagcaattctc 27656973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 28564605 - 28564673
Alignment:
Q  225 ctgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    ||||||| || ||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||    
T  28564605 ctgccgatgggcatttgagtaatttactcgtgtggcacaaccaaaccaaatatgggaacaacaattctc 28564673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 173 - 289
Target Start/End: Original strand, 38555431 - 38555547
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  || ||||    |||||||||| |||| |||||||||||| |||||||||| ||||||||||  | | |||||||||    
T  38555431 agttttcctcggcagttaactgcagctggttctttaaaatttcggcagttaactgccgaaggatatttgagtaaattactcgtgtttctcggccaaacca 38555530  T
Q  273 aatgtgggaacaacaat 289  Q
    |||||  ||||||||||    
T  38555531 aatgtctgaacaacaat 38555547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 17835270 - 17835208
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    ||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||    
T  17835270 ttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgagaattttg 17835208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 19072492 - 19072370
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  |||| ||    ||||||| || |||| |||| ||| || ||||||||||||||||||||||  | ||||| |||||    
T  19072492 agttttcctcggcagttaactgtagccgattctttaaaattttggcagttaactgtcgaggggcatttgagtaatttactcgtgtttctcagccgaacca 19072393  T
Q  273 aatgtgggaacaacaattctctt 295  Q
    |||||| ||||| ||||||||||    
T  19072392 aatgtgtgaacagcaattctctt 19072370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 42507906 - 42507968
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    ||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||    
T  42507906 ttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgagaattttg 42507968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 63 - 124
Target Start/End: Complemental strand, 34738556 - 34738495
Alignment:
Q  63 tgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    |||||||||||||||||||||||  ||||||||||||||| |||||||||||| ||||||||    
T  34738556 tgatttgcttgcaattcgtgaaaatagatttggtgaagattggagagaaattgtgaattttg 34738495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 293
Target Start/End: Complemental strand, 10098379 - 10098267
Alignment:
Q  181 tcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtggg 280  Q
    |||||||||||||| |||||||| |  ||||  |||||||   |||||||| || |||||  ||| |||||||||||| ||||||||||| | |||||||    
T  10098379 tcggcagttaactgccgccggttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgtggcacagccaaactatatgtggg 10098280  T
Q  281 aacaacaattctc 293  Q
    |||||||||||||    
T  10098279 aacaacaattctc 10098267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 289
Target Start/End: Complemental strand, 13644476 - 13644360
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||||||||| |||||||  |||||||    |||||||||| |||| ||||||| |||| ||||| |||| ||||||||||  | |||||||| ||    
T  13644476 agttttcctcggcatttaactgcagccggttctttaaaatttcggcagttaactgccgtaggatatttgggtaaattactcgtgtttctcagccaaatca 13644377  T
Q  273 aatgtgggaacaacaat 289  Q
    |||||| ||||||||||    
T  13644376 aatgtgtgaacaacaat 13644360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 42583142 - 42583198
Alignment:
Q  237 atttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||    
T  42583142 atttgagtaatttactcgtgtggcacatccaaaccaaaagtgggaacaacaattctc 42583198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 170 - 294
Target Start/End: Original strand, 46908488 - 46908612
Alignment:
Q  170 ttcagttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaa 269  Q
    |||||||||||||||||||||||||  ||||  ||   |||| ||||  |||| ||||||||  |  |||| | ||||||||||||||| ||||||||||    
T  46908488 ttcagttttcctcggcagttaactgcagccgtatttctaaaacttcgacagttaactgccgagaggtatttaaataatttactcgtgtggcacagccaaa 46908587  T
Q  270 ccaaatgtgggaacaacaattctct 294  Q
    ||||| ||||||||| |||||||||    
T  46908588 ccaaaagtgggaacagcaattctct 46908612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 45767880 - 45768002
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatt-tcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||||  ||||   |||||||   |||||||||||  ||||  ||| |||||||||||| |||||||||| ||    
T  45767880 gttttcctcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaa-ca 45767978  T
Q  273 aatgtgggaacaacaattctctta 296  Q
    |||||||||||| |||| ||||||    
T  45767979 aatgtgggaacagcaatactctta 45768002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 15074107 - 15074169
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    ||||||||||| ||||||||||||   |||||||||||||| |||||||||||||||||||||    
T  15074107 ttgatttgcttacaattcgtgaaaatggatttggtgaagattggagagaaattgagaattttg 15074169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 289
Target Start/End: Complemental strand, 43619757 - 43619643
Alignment:
Q  176 tttcctcggcagttaactggcgccggtttcacaaaatt-tcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaa 274  Q
    ||||||||||||||||||| ||||||||||  ||||   |||||||   |||||||||||| ||||  ||| |||||||||||| ||||||||||| | |    
T  43619757 tttcctcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaaggatattttggtattttactcgtgtggcacagccaaacaaca 43619658  T
Q  275 tgtgggaacaacaat 289  Q
    |||||||||| ||||    
T  43619657 tgtgggaacagcaat 43619643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 266
Target Start/End: Complemental strand, 17834542 - 17834449
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagcc 266  Q
    |||||||||||||||||||||| |||||||||   |||| ||||| |||| ||||||||||| |||||   ||| ||||||||||| |||||||    
T  17834542 agttttcctcggcagttaactgccgccggtttactaaaacttcggcagttaactgccgaagggcattttcataaattactcgtgtggcacagcc 17834449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 173 - 289
Target Start/End: Complemental strand, 11886014 - 11885898
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  | |||||    ||||||||| || || | |||||| |||||||||| ||||||||||||||  | ||||||||| |    
T  11886014 agttttcctcggcagttaactgcagtcggttctttaaaatttcgataattaattgccgagggacatttgaataatttactcgtgtttctcagccaaacga 11885915  T
Q  273 aatgtgggaacaacaat 289  Q
    ||||||  |||||||||    
T  11885914 aatgtgtcaacaacaat 11885898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 177 - 289
Target Start/End: Complemental strand, 14101499 - 14101387
Alignment:
Q  177 ttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatg 276  Q
    |||||||||||||| |||  |||||||    |||||||||| |||| |||||| | || ||||||||||||||||||||||  | |||||||| ||||||    
T  14101499 ttcctcggcagttagctgcagccggttctttaaaatttcggcagttaactgccaaggggcatttgagtaatttactcgtgtttctcagccaaatcaaatg 14101400  T
Q  277 tgggaacaacaat 289  Q
    || ||||| ||||    
T  14101399 tgtgaacatcaat 14101387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 177 - 289
Target Start/End: Complemental strand, 14411516 - 14411404
Alignment:
Q  177 ttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatg 276  Q
    |||||||||||||| |||  |||||||    |||||||||| |||| |||||| | || ||||||||||||||||||||||  | |||||||| ||||||    
T  14411516 ttcctcggcagttagctgcagccggttctttaaaatttcggcagttaactgccaaggggcatttgagtaatttactcgtgtttctcagccaaatcaaatg 14411417  T
Q  277 tgggaacaacaat 289  Q
    || ||||| ||||    
T  14411416 tgtgaacatcaat 14411404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 178 - 294
Target Start/End: Original strand, 19804512 - 19804628
Alignment:
Q  178 tcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgt 277  Q
    |||||||||||||||||  |||||||||   ||| ||||| |||| ||| |||| || |||||  |||| ||||||||||| | ||||||||| ||||||    
T  19804512 tcctcggcagttaactgcagccggtttccacaaacttcggcagttaactaccgaggggcatttaggtaaattactcgtgtgtctcagccaaacaaaatgt 19804611  T
Q  278 gggaacaacaattctct 294  Q
    |  ||||||||||||||    
T  19804612 gtcaacaacaattctct 19804628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 277
Target Start/End: Original strand, 30846814 - 30846917
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaa 273  Q
    |||||||||||||||||||||  |||||||    |||||||||| |||| |||| ||| ||  |||||||||||||||||||||  |  |||||||||||    
T  30846814 gttttcctcggcagttaactgcagccggttctttaaaatttcggcagttaactgtcgaggggtatttgagtaatttactcgtgtttcttagccaaaccaa 30846913  T
Q  274 atgt 277  Q
    ||||    
T  30846914 atgt 30846917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 295
Target Start/End: Original strand, 48407347 - 48407462
Alignment:
Q  181 tcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgg 279  Q
    |||||||||||||| ||||||||||  ||||  ||||||||   |||||||| || ||||| ||||  ||||||||||| ||||||||||| | ||||||    
T  48407347 tcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaggggcattttagtatattactcgtgtggcacagccaaacaacatgtgg 48407446  T
Q  280 gaacaacaattctctt 295  Q
    ||| | ||||||||||    
T  48407447 gaagagcaattctctt 48407462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 181 - 295
Target Start/End: Original strand, 20566386 - 20566500
Alignment:
Q  181 tcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtggg 280  Q
    |||||||||||||| ||||| || |  ||||  |||||||   |||| ||| || |||||  ||| |||||||||||| ||||||||||| | |||||||    
T  20566386 tcggcagttaactgccgccgattcctaaaaacctcggtagcaaactgtcgaggggcattttggtattttactcgtgtggcacagccaaactatatgtggg 20566485  T
Q  281 aacaacaattctctt 295  Q
    |||||||||||||||    
T  20566486 aacaacaattctctt 20566500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 278
Target Start/End: Original strand, 14102366 - 14102471
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||| ||  |||| ||    |||||||||| |||| |||| ||| || |||||||||||||||||| |||  | |||||||||||    
T  14102366 agttttcctcggcagttaattgcagccgattctttaaaatttcggcagttaactgtcgaggggcatttgagtaatttactcatgtttctcagccaaacca 14102465  T
Q  273 aatgtg 278  Q
    ||||||    
T  14102466 aatgtg 14102471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 278
Target Start/End: Original strand, 14412383 - 14412488
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||| ||  |||| ||    |||||||||| |||| |||| ||| || |||||||||||||||||| |||  | |||||||||||    
T  14412383 agttttcctcggcagttaattgcagccgattctttaaaatttcggcagttaactgtcgaggggcatttgagtaatttactcatgtttctcagccaaacca 14412482  T
Q  273 aatgtg 278  Q
    ||||||    
T  14412483 aatgtg 14412488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 27453499 - 27453576
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg-tgaagttttggaaa 138  Q
    ||||||||||||||||| ||||||   | |||||||||||| |||||||||||| ||||||||  |||||||||||||    
T  27453499 ttgatttgcttgcaatttgtgaaaatggctttggtgaagattggagagaaattgtgaattttgaagaagttttggaaa 27453576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 289
Target Start/End: Complemental strand, 9365692 - 9365584
Alignment:
Q  181 tcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtggg 280  Q
    |||||||||||||| |||||||| |  |||| ||||||||   |||||||| || |||||  ||| |||||||||||| ||||||||||| | |||| ||    
T  9365692 tcggcagttaactgccgccggttcctaaaaacttcggtagcaaactgccgaggggcattttggtattttactcgtgtggcacagccaaactatatgtagg 9365593  T
Q  281 aacaacaat 289  Q
    |||| ||||    
T  9365592 aacagcaat 9365584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 295
Target Start/End: Original strand, 16636335 - 16636383
Alignment:
Q  247 tttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctctt 295  Q
    |||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  16636335 tttactcgtgtggcacagccaaacaacatgtgggaacaacaattctctt 16636383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 295
Target Start/End: Complemental strand, 17459303 - 17459255
Alignment:
Q  247 tttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctctt 295  Q
    |||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  17459303 tttactcgtgtggcacagccaaacaacatgtgggaacaacaattctctt 17459255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 295
Target Start/End: Original strand, 17593911 - 17593959
Alignment:
Q  247 tttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctctt 295  Q
    |||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  17593911 tttactcgtgtggcacagccaaacaacatgtgggaacaacaattctctt 17593959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 178 - 289
Target Start/End: Original strand, 5541566 - 5541677
Alignment:
Q  178 tcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgt 277  Q
    ||||||| ||||||||| |||||||||   |||| || |  |||| |||||| |||| |||||  |||| ||||||||||| | ||||||||||||||||    
T  5541566 tcctcgggagttaactgccgccggttttctaaaactttgacagttaactgccaaagggcatttaggtaaattactcgtgtgtctcagccaaaccaaatgt 5541665  T
Q  278 gggaacaacaat 289  Q
    |  |||||||||    
T  5541666 gtcaacaacaat 5541677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 178 - 296
Target Start/End: Complemental strand, 48403422 - 48403303
Alignment:
Q  178 tcctcggcagttaactggcgccggttt-cacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatg 276  Q
    ||||||| ||||| ||| ||||||||| |  |||| ||||| |||| ||||||||||| |||||  ||| |||||| ||||| |||||||| || | |||    
T  48403422 tcctcggtagttagctgccgccggtttgctaaaaacttcggcagttaactgccgaagggcatttttgtattttactggtgtggcacagccatactatatg 48403323  T
Q  277 tgggaacaacaattctctta 296  Q
    |||||||| |||| ||||||    
T  48403322 tgggaacagcaatactctta 48403303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 173 - 294
Target Start/End: Complemental strand, 12027394 - 12027274
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||||||| |||||||||  ||| ||||  ||||||||||| |||| ||  |||| |  |||||||||||||||| |||||    |||||||||||    
T  12027394 agttttcctcgg-agttaactgcagccagtttttcaaaatttcggcagttaacaaccgaggagcatttgagtaatttacccgtgtttttcagccaaacca 12027296  T
Q  273 aatgtgggaacaacaattctct 294  Q
    || |||| || |||||||||||    
T  12027295 aacgtggaaagaacaattctct 12027274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 224 - 293
Target Start/End: Complemental strand, 35606792 - 35606723
Alignment:
Q  224 actgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    ||||||||||  |||||  ||| |||||||||||| ||||| ||||| | ||||||||||||||||||||    
T  35606792 actgccgaagagcattttcgtattttactcgtgtggcacaggcaaacaacatgtgggaacaacaattctc 35606723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 45791360 - 45791268
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaa 268  Q
    |||||||||||| |||||||||  |||||||||| ||   ||||  |||| ||||||||| ||||||| ||||| ||||| || ||||||||||||    
T  45791360 agttttcctcggtagttaactgcagccggtttcataa---ttcgacagttaactgccgaaagacattttagtaaattactagtatgacacagccaa 45791268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 17465694 - 17465726
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaactg 194  Q
    |||||||||||||||||||||||||||||||||    
T  17465694 tggttatgttcagttttcctcggcagttaactg 17465726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 17465736 - 17465852
Alignment:
Q  178 tcctcggcagttaactggcgccggttt-cacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatg 276  Q
    ||||||| ||||| ||| ||||||||| |  |||||||||  |||| |||||||||||  ||||  ||| |||||| ||||| |||||||| || | |||    
T  17465736 tcctcggtagttagctgccgccggtttactaaaaatttcgacagttaactgccgaagggtattttcgtattttactggtgtggcacagccatactatatg 17465835  T
Q  277 tgggaacaacaattctc 293  Q
    |||||||| ||||||||    
T  17465836 tgggaacatcaattctc 17465852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 17587478 - 17587362
Alignment:
Q  178 tcctcggcagttaactggcgccggttt-cacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatg 276  Q
    ||||||| ||||| ||| ||||||||| |  |||||||||  |||| |||||||||||  ||||  ||| |||||| ||||| |||||||| || | |||    
T  17587478 tcctcggtagttagctgccgccggtttactaaaaatttcgacagttaactgccgaagggtattttcgtattttactggtgtggcacagccatactatatg 17587379  T
Q  277 tgggaacaacaattctc 293  Q
    |||||||| ||||||||    
T  17587378 tgggaacatcaattctc 17587362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 17587520 - 17587488
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaactg 194  Q
    |||||||||||||||||||||||||||||||||    
T  17587520 tggttatgttcagttttcctcggcagttaactg 17587488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 293
Target Start/End: Complemental strand, 20564127 - 20564007
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcac-aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||| ||||||| |||||| ||||||||||   |||| ||||||||   ||||||||||| |||||  ||| ||||||||| || |||| ||| || |    
T  20564127 gttttcttcggcagctaactgccgccggtttccttaaaacttcggtagcaaactgccgaagggcattttggtattttactcgtatggcacaaccatacta 20564028  T
Q  273 aatgtgggaacaacaattctc 293  Q
     ||||||||||| ||||||||    
T  20564027 tatgtgggaacagcaattctc 20564007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 214 - 290
Target Start/End: Original strand, 34139728 - 34139804
Alignment:
Q  214 tcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaatt 290  Q
    |||| |||| |||||||| || ||||||||||||||||||||||  | |||||||||  ||||||  ||||||||||    
T  34139728 tcggcagttaactgccgaggggcatttgagtaatttactcgtgtttctcagccaaactcaatgtgtcaacaacaatt 34139804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 294
Target Start/End: Complemental strand, 41734240 - 41734125
Alignment:
Q  179 cctcggcagttaactggcgccggtttc-acaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgt 277  Q
    ||||| ||||||||||  |||||| || |||||||| ||  |||| ||||||||||| ||||| | ||| ||||||||| | | ||||| ||||||||||    
T  41734240 cctcgacagttaactgtagccggtatccacaaaatt-cgacagttaactgccgaagggcatttaaataaattactcgtgcgtctcagcctaaccaaatgt 41734142  T
Q  278 gggaacaacaattctct 294  Q
    |  ||||||||||||||    
T  41734141 gtcaacaacaattctct 41734125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 297
Target Start/End: Original strand, 47751238 - 47751326
Alignment:
Q  209 aaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctcttat 297  Q
    ||||||||| |||| | |||||||||  |||||||||||||||||||||    |||| ||||||||| ||  ||||||||| |||||||    
T  47751238 aaatttcggcagttaagtgccgaagggtatttgagtaatttactcgtgtttatcagctaaaccaaatatgtcaacaacaatactcttat 47751326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 124
Target Start/End: Complemental strand, 37340498 - 37340435
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    |||||||||||||||||||||||||   | |||||||||||| ||| |||| ||||||| ||||    
T  37340498 gttgatttgcttgcaattcgtgaaaatggctttggtgaagattggaaagaatttgagaagtttg 37340435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 37345167 - 37345242
Alignment:
Q  219 agtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctct 294  Q
    |||| |||||||||||||||||  |||| ||||||||||| | ||||| |||||||| ||  |||| |||||||||    
T  37345167 agttaactgccgaaggacatttaggtaaattactcgtgtgtctcagcctaaccaaatatgtcaacatcaattctct 37345242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 123
Target Start/End: Complemental strand, 39460722 - 39460660
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaaga-tttggtgaagatcggagagaaattgagaatttt 123  Q
    ||||||||||||||||||||||||| | || ||||||||| ||  |||||||||||||||||||    
T  39460722 gttgatttgcttgcaattcgtgaaa-atgactttggtgaacattagagagaaattgagaatttt 39460660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 138
Target Start/End: Complemental strand, 47776527 - 47776449
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaaga-tttggtgaagatcggagagaaattgagaatttt-gtgaagttttggaaa 138  Q
    |||||||||||||||||| |||||| | || |||||||||||| |||||||||| | ||||||| | |||||||||||||    
T  47776527 gttgatttgcttgcaatttgtgaaa-atgactttggtgaagattggagagaaatggtgaattttggagaagttttggaaa 47776449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 36977790 - 36977733
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgaga 118  Q
    |||||||||||||||||||||||||   | |||||||||||| ||| |||| ||||||    
T  36977790 gttgatttgcttgcaattcgtgaaaatggctttggtgaagattggaaagaatttgaga 36977733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 9371368 - 9371400
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaactg 194  Q
    |||||||| ||||||||||||||||||||||||    
T  9371368 tggttatgatcagttttcctcggcagttaactg 9371400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 10168239 - 10168271
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaactg 194  Q
    |||||||| ||||||||||||||||||||||||    
T  10168239 tggttatgatcagttttcctcggcagttaactg 10168271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 10175764 - 10175796
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaactg 194  Q
    |||||||| ||||||||||||||||||||||||    
T  10175764 tggttatgatcagttttcctcggcagttaactg 10175796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 35610396 - 35610428
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaactg 194  Q
    ||||||||||||||||||||||| |||||||||    
T  35610396 tggttatgttcagttttcctcggtagttaactg 35610428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 213 - 293
Target Start/End: Original strand, 35610474 - 35610554
Alignment:
Q  213 ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    ||||| |||| ||||||||| | |||||  ||| |||||| ||||| |||||||| || | ||||||||||| ||||||||    
T  35610474 ttcggcagttaactgccgaatggcattttcgtattttactggtgtggcacagccatactatatgtgggaacagcaattctc 35610554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 48829947 - 48829895
Alignment:
Q  243 gtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctctt 295  Q
    |||| ||||||||||| |||| ||  | |||||||||||||||||||||||||    
T  48829947 gtaaattactcgtgtgccacaaccttatcaaatgtgggaacaacaattctctt 48829895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 2e-38; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 174 - 294
Target Start/End: Complemental strand, 13382683 - 13382562
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||||  ||||  ||||  |||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  13382683 gttttcctcggcagttaactgccgccggtttcctaaaaacttcgtcagtttactaccgaaggacatttgagtaatttactcgtgtggcacagccaaacca 13382584  T
Q  273 aatgtgggaacaacaattctct 294  Q
    ||||||||||||||||||||||    
T  13382583 aatgtgggaacaacaattctct 13382562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 22304934 - 22305051
Alignment:
Q  19 gtctagtcaaacctgaacactactatataatataagtgtgtcgttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgaga 118  Q
    |||||||||||  ||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||  |||||||||||||     
T  22304934 gtctagtcaaatatgaacactactatataatataagtgtcccgttgatttgctcgcaattcgtgaaagaagatttggcgaagatttgagagaaattgagt 22305033  T
Q  119 attttgtgaagttttgga 136  Q
    | ||||||||||||||||    
T  22305034 agtttgtgaagttttgga 22305051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 13164278 - 13164395
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||||||| |||||||||  |||||||||| ||   |||||||||| |||||||| || ||||||||||||||||||||||| || |||||||| |    
T  13164278 agttttcctcgggagttaactgcagccggtttcataa---ttcggtagttaactgccgaggggcatttgagtaatttactcgtgtggcatagccaaacta 13164374  T
Q  273 aatgtgggaacaacaattctc 293  Q
    |||||||||||||||||||||    
T  13164375 aatgtgggaacaacaattctc 13164395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 43 - 136
Target Start/End: Original strand, 27639433 - 27639526
Alignment:
Q  43 atataatataagtgtgtcgttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagttttgga 136  Q
    |||||||||||||||  |||| ||||||| |||||||||||||||||| |||  ||||||  ||||||| ||||||||||||||||||||||||    
T  27639433 atataatataagtgtcccgttcatttgctcgcaattcgtgaaagaagaattgacgaagatttgagagaacttgagaattttgtgaagttttgga 27639526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 2109572 - 2109452
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  ||||  ||   |||| ||||| |||| ||||||||  |  |||||||||||||||||||||| ||||||||||| |    
T  2109572 agttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgagaggtatttgagtaatttactcgtgtggcacagccaaacaa 2109473  T
Q  273 aatgtgggaacaacaattctc 293  Q
    || ||||||||||||||||||    
T  2109472 aaagtgggaacaacaattctc 2109452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 6760890 - 6761010
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||||||||| |||||||  ||||  ||   |||| ||||| |||| ||| || | || ||||||||||||||||||||||| |||||||||||||    
T  6760890 agttttcctcggcaattaactgcagccgtatttctaaaacttcggcagttaactaccaaggggcatttgagtaatttactcgtgtggcacagccaaacca 6760989  T
Q  273 aatgtgggaacaacaattctc 293  Q
    |||||||||||| ||||||||    
T  6760990 aatgtgggaacagcaattctc 6761010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 174 - 293
Target Start/End: Complemental strand, 28249939 - 28249819
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| |||||||| |  ||||  ||||| | || |||| ||| |  ||||||||||||||||||||||| |||||||||||||    
T  28249939 gttttcctcggcagttaactgccgccggttccctaaaaacttcggcatttaactgtcgaggagcatttgagtaatttactcgtgtggcacagccaaacca 28249840  T
Q  273 aatgtgggaacaacaattctc 293  Q
    ||||||  |||||||||||||    
T  28249839 aatgtgtaaacaacaattctc 28249819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 6204682 - 6204769
Alignment:
Q  43 atataatataagtgtgtcgttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagt 130  Q
    |||||||||||||||  |||||||||||| |||||||||||||||||| |||| ||||||  ||||||| ||||||| ||||||||||    
T  6204682 atataatataagtgtcccgttgatttgctcgcaattcgtgaaagaagaattggcgaagatttgagagaacttgagaactttgtgaagt 6204769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 11691649 - 11691736
Alignment:
Q  43 atataatataagtgtgtcgttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagt 130  Q
    |||||||||||||||  |||||||||||| |||||||||||||||||| |||| ||||||  ||||||| ||||||| ||||||||||    
T  11691649 atataatataagtgtcccgttgatttgctcgcaattcgtgaaagaagaattggcgaagatttgagagaacttgagaactttgtgaagt 11691736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 32691198 - 32691079
Alignment:
Q  181 tcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgg 279  Q
    |||||||||||||| ||||| ||||  ||||  ||||| |||| |||| ||| || |||||| |||||||||| ||||| |||| |||||||||||||||    
T  32691198 tcggcagttaactgccgccgatttcctaaaaacttcggcagttaactgtcgaggggcatttgcgtaatttacttgtgtggcacaaccaaaccaaatgtgg 32691099  T
Q  280 gaacaacaattctcttatat 299  Q
    |||||||||||||| |||||    
T  32691098 gaacaacaattctcctatat 32691079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 8707973 - 8707917
Alignment:
Q  236 catttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattct 292  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  8707973 catttgagtaatttactcgtgtggcacggccaaaccaaatgtgggaacaacaattct 8707917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 18351662 - 18351782
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| | ||||||||  ||||| ||||||||   |||||||||| ||||||  ||| |||||||||||| ||||||||||| |    
T  18351662 gttttcctcggcagttaactgccaccggtttcctaaaatcttcggtagcaaactgccgaagaacattttggtattttactcgtgtggcacagccaaacaa 18351761  T
Q  273 aatgtgggaacaacaattctc 293  Q
     ||||| ||||| ||||||||    
T  18351762 catgtgagaacagcaattctc 18351782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 25554760 - 25554640
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||| ||||||||||||  ||||  ||   |||| ||||| |||| |||||||| ||  |||||||||||||||||||||| ||||||||||  |    
T  25554760 agttttcctaggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagccaaagta 25554661  T
Q  273 aatgtgggaacaacaattctc 293  Q
    || ||||||||||||||||||    
T  25554660 aaagtgggaacaacaattctc 25554640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 15888817 - 15888939
Alignment:
Q  172 cagttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacc 271  Q
    |||||||||||||||||||||||  ||||||||   |||| |||||||||| |||||||||||   |||| |||| ||||||||||  | ||||||||||    
T  15888817 cagttttcctcggcagttaactgcagccggttttctaaaacttcggtagttaactgccgaagg-tgtttgggtaaattactcgtgtttctcagccaaacc 15888915  T
Q  272 aaatgtgggaacaacaattctctt 295  Q
    |||||||  |||| ||||||||||    
T  15888916 aaatgtgtaaacatcaattctctt 15888939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 296
Target Start/End: Original strand, 17597542 - 17597666
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacc 271  Q
    |||||||||||||||||||||| ||||||||||  ||||  ||||  ||   ||| |||||| ||||||||||||||||||||||||  ||||  ||||     
T  17597542 agttttcctcggcagttaactgccgccggtttcctaaaaacttcgacagcaaactaccgaagaacatttgagtaatttactcgtgtggtacagttaaact 17597641  T
Q  272 aaatgtgggaacaacaattctctta 296  Q
    | ||||||||||| |||||||||||    
T  17597642 atatgtgggaacatcaattctctta 17597666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 174 - 293
Target Start/End: Complemental strand, 27616769 - 27616649
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcac-aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||| |||||||||||||| ||||||||||   |||| ||||||||   ||||||||||| |||||  ||| |||||||||||| |||||||| || |    
T  27616769 gttttcttcggcagttaactgccgccggtttccttaaaacttcggtagcaaactgccgaagggcattttggtattttactcgtgtggcacagccatacta 27616670  T
Q  273 aatgtgggaacaacaattctc 293  Q
     ||||||||||| ||||||||    
T  27616669 tatgtgggaacagcaattctc 27616649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 169 - 293
Target Start/End: Complemental strand, 30826109 - 30825984
Alignment:
Q  169 gttcagttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagcca 267  Q
    |||||| ||||||||||||||||||| |||||||| |  ||||  ||||||||   ||||||||||  |||||   || |||||||||||| ||||||||    
T  30826109 gttcagatttcctcggcagttaactgccgccggttgcctaaaaacttcggtagcaaactgccgaagagcatttttatattttactcgtgtggcacagcca 30826010  T
Q  268 aaccaaatgtgggaacaacaattctc 293  Q
    ||| | ||||||||||| ||||||||    
T  30826009 aacaacatgtgggaacagcaattctc 30825984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 174 - 293
Target Start/End: Complemental strand, 26712102 - 26711983
Alignment:
Q  174 gttttcctcggcagttaactggcgccggttt-cacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||| ||| |  |||| ||||| |||||||| ||||||| |||||  |||| |||||||| || |||||||  ||||    
T  26712102 gttttcctcggcagttaactgccgccgatttcctaaaaacttcggcagtttactaccgaagggcatttccgtaacttactcgtttggcacagcc-tacca 26712004  T
Q  273 aatgtgggaacaacaattctc 293  Q
     ||||||||||| ||||||||    
T  26712003 tatgtgggaacagcaattctc 26711983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 181 - 297
Target Start/End: Original strand, 27641778 - 27641894
Alignment:
Q  181 tcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtggg 280  Q
    |||||||||||||| |||||||| |  ||||  |||||||   |||||||| || |||||  ||| |||||| ||||| ||||||||||| | |||||||    
T  27641778 tcggcagttaactgccgccggttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactagtgtggcacagccaaacaacatgtggg 27641877  T
Q  281 aacaacaattctcttat 297  Q
    |||| ||||||||||||    
T  27641878 aacagcaattctcttat 27641894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 293
Target Start/End: Complemental strand, 13158449 - 13158370
Alignment:
Q  214 tcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||| |||| |||||||| ||  |||||| ||||||||||||||||||||| ||||  ||| ||||||||||||||||||    
T  13158449 tcggcagttaactgccgaggggtatttgaataatttactcgtgtgacacaggcaaagtaaaagtgggaacaacaattctc 13158370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 293
Target Start/End: Complemental strand, 13163305 - 13163226
Alignment:
Q  214 tcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||| |||| |||||||| ||  |||||| ||||||||||||||||||||| ||||  ||| ||||||||||||||||||    
T  13163305 tcggcagttaactgccgaggggtatttgaataatttactcgtgtgacacaggcaaagtaaaagtgggaacaacaattctc 13163226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 173 - 263
Target Start/End: Complemental strand, 26350029 - 26349940
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacaca 263  Q
    |||||||||||||||||||||| ||||||||| || ||| ||||| |||| ||||||||||  |||||  ||||  |||||||||||||||    
T  26350029 agttttcctcggcagttaactgccgccggttt-actaaacttcggcagttaactgccgaagagcattttcgtaaaatactcgtgtgacaca 26349940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 214 - 295
Target Start/End: Complemental strand, 35096685 - 35096604
Alignment:
Q  214 tcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctctt 295  Q
    |||| |||| ||| ||||||| ||||||||||||||||||||||  | || ||||||||||||||  ||||||||| |||||    
T  35096685 tcggcagttaactaccgaagggcatttgagtaatttactcgtgtttctcaaccaaaccaaatgtgtaaacaacaatactctt 35096604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 295
Target Start/End: Complemental strand, 11688122 - 11688046
Alignment:
Q  219 agtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctctt 295  Q
    |||| ||||||||||| |||||  ||| |||||||||||| |||||||| ||   ||||||||||||||||||||||    
T  11688122 agttaactgccgaagggcattttggtattttactcgtgtggcacagccatactgtatgtgggaacaacaattctctt 11688046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 293
Target Start/End: Complemental strand, 455482 - 455404
Alignment:
Q  215 cggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||||||||||||||||||| |||||| |||| ||||||||||  | |||||||  || |||||  |||||||||||||    
T  455482 cggtagtttactgccgaagggcatttgggtaaattactcgtgtttctcagccaatgcatatgtgtcaacaacaattctc 455404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 181 - 294
Target Start/End: Original strand, 6207120 - 6207233
Alignment:
Q  181 tcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtggg 280  Q
    |||||||||||||| |||||||| |  ||||  ||| |||   ||||||||||| |||||  ||| |||||||||||| ||||| ||||| | |||||||    
T  6207120 tcggcagttaactgccgccggttcctaaaaacctcgatagcaaactgccgaagggcattttggtattttactcgtgtggcacagtcaaactatatgtggg 6207219  T
Q  281 aacaacaattctct 294  Q
    || | |||||||||    
T  6207220 aaaagcaattctct 6207233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 224 - 293
Target Start/End: Original strand, 11694130 - 11694199
Alignment:
Q  224 actgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||||||| || |||||  ||| |||||||||||| ||||||||||| | ||||||||||| ||||||||    
T  11694130 actgccgaggggcattttggtattttactcgtgtggcacagccaaactatatgtgggaacagcaattctc 11694199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 11688206 - 11688174
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaactg 194  Q
    |||||||||||||||||||||||||||||||||    
T  11688206 tggttatgttcagttttcctcggcagttaactg 11688174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 30829632 - 30829664
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaactg 194  Q
    |||||||||||||||||||||||||||||||||    
T  30829632 tggttatgttcagttttcctcggcagttaactg 30829664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 6320407 - 6320470
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    |||||||||||||||||||||||||   | |||||||||||| ||| |||| ||||||| ||||    
T  6320407 gttgatttgcttgcaattcgtgaaaatggctttggtgaagattggaaagaatttgagaagtttg 6320470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 293
Target Start/End: Complemental strand, 31768738 - 31768687
Alignment:
Q  242 agtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    ||||| |||||||||| ||||||||  | |||||||||||||||||||||||    
T  31768738 agtaaattactcgtgttacacagccttatcaaatgtgggaacaacaattctc 31768687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 174 - 264
Target Start/End: Original strand, 26351115 - 26351205
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacag 264  Q
    ||||||||||||||||||||| |||||||||   |||| ||||  |||| |||| |||| |||||||  ||||  |||||||||| |||||    
T  26351115 gttttcctcggcagttaactgccgccggtttactaaaacttcgacagttaactgtcgaatgacattttcgtaaagtactcgtgtggcacag 26351205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 290
Target Start/End: Original strand, 14124736 - 14124853
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||||| ||| |||||||  |||| || || |||| ||||  |||| | || ||| || ||||||||||||||||||||||  |  ||||||| ||    
T  14124736 agttttcctcagcaattaactgcagccgattccagaaaacttcgacagttaattgtcgaggggcatttgagtaatttactcgtgtttcttagccaaatca 14124835  T
Q  273 aatgtgggaacaacaatt 290  Q
    ||||||  ||||||||||    
T  14124836 aatgtgtcaacaacaatt 14124853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 293
Target Start/End: Original strand, 15546428 - 15546457
Alignment:
Q  264 gccaaaccaaatgtgggaacaacaattctc 293  Q
    ||||||||||||||||||||||||||||||    
T  15546428 gccaaaccaaatgtgggaacaacaattctc 15546457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 170 - 252
Target Start/End: Complemental strand, 117316 - 117237
Alignment:
Q  170 ttcagttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttact 252  Q
    |||||||||||||||||||||||||  ||||||| || ||   ||||| |||| |||||||| || |||||| |||| |||||    
T  117316 ttcagttttcctcggcagttaactgcagccggttccataa---ttcggcagttaactgccgaggggcatttgggtaaattact 117237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 243 - 295
Target Start/End: Original strand, 117923 - 117975
Alignment:
Q  243 gtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctctt 295  Q
    |||| |||||||||||||||| ||  | |||||||||||||| ||||||||||    
T  117923 gtaaattactcgtgtgacacaaccttatcaaatgtgggaacatcaattctctt 117975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 233
Target Start/End: Complemental strand, 6204881 - 6204821
Alignment:
Q  174 gttttcctcggcagttaactggcgccgg-tttcacaaaatttcggtagtttactgccgaag 233  Q
    |||||||||||||||||||||  ||||| ||| | |||||||||| |||| ||||||||||    
T  6204881 gttttcctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccgaag 6204821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 233
Target Start/End: Complemental strand, 22305162 - 22305102
Alignment:
Q  174 gttttcctcggcagttaactggcgccgg-tttcacaaaatttcggtagtttactgccgaag 233  Q
    |||||||||||||||||||||  ||||| |||  ||||||||||| |||| ||||||||||    
T  22305162 gttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccgaag 22305102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 213 - 289
Target Start/End: Complemental strand, 24719956 - 24719880
Alignment:
Q  213 ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaat 289  Q
    ||||| |||| |||||||||||||||||  |||| ||| ||||||| | ||||| || ||||||||  |||||||||    
T  24719956 ttcggcagttaactgccgaaggacatttaggtaaattagtcgtgtgtctcagcctaatcaaatgtgtcaacaacaat 24719880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 213 - 289
Target Start/End: Original strand, 30829710 - 30829786
Alignment:
Q  213 ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaat 289  Q
    |||||||||| |||| |||||| |||||  ||| |||||||||||| |||| ||| || | ||||||||||| ||||    
T  30829710 ttcggtagttaactgtcgaagggcattttcgtattttactcgtgtggcacaaccatactatatgtgggaacagcaat 30829786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 78; Significance: 4e-36; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 61 - 193
Target Start/End: Original strand, 15501 - 15634
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagttttggaaaatggggaactctg-ttctgtga 159  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| || ||| |||||||||||||||||||||||||||||| |||| |||||||     
T  15501 gttgatttgcttgcaattcgtgaaagaagatttggtgaagattggagaaaatttgtgaattttgtgaagttttggaaaatggggaagtctgcttctgtgt 15600  T
Q  160 tttggttatgttcagttttcctcggcagttaact 193  Q
    | |||||  |||||  ||| ||||||||||||||    
T  15601 tctggtttagttcatattttctcggcagttaact 15634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 15641 - 15760
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaa 273  Q
    ||||||||||||||||||||| |||||||||   |||| ||||  |||| |||||||||||||||||  ||||  |||||||||| |||| |||||||||    
T  15641 gttttcctcggcagttaactgccgccggtttactaaaacttcgacagttaactgccgaaggacattttcgtaaagtactcgtgtggcacaaccaaaccaa 15740  T
Q  274 atgtgggaacaacaattctc 293  Q
    |||||| |||| ||||||||    
T  15741 atgtggaaacaccaattctc 15760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 4e-36; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 13636369 - 13636252
Alignment:
Q  19 gtctagtcaaacctgaacactactatataatataagtgtgtcgttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgaga 118  Q
    |||||||||||  ||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||  |||||||||||||     
T  13636369 gtctagtcaaatttgaacactactatataatataagtgtcccgttgatttgctcgcaattcgtgaaagaagatttggcgaagatttgagagaaattgagt 13636270  T
Q  119 attttgtgaagttttgga 136  Q
    | ||||||||||||||||    
T  13636269 agtttgtgaagttttgga 13636252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 61 - 193
Target Start/End: Original strand, 2425565 - 2425697
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagttttggaaaatggggaactctgttctgtgat 160  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| || ||| |||||||||||||||||||||||||||||| || | | || | |    
T  2425565 gttgatttgcttgcaattcgtgaaagaagatttggtgaagattggagaaaatttgtgaattttgtgaagttttggaaaatggggaagtccggtttgcgtt 2425664  T
Q  161 ttggttatgttcagttttcctcggcagttaact 193  Q
     |||||  || ||| ||||||||||||||||||    
T  2425665 ctggtttagtgcagatttcctcggcagttaact 2425697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 30195405 - 30195522
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  |||||||||| ||   |||   |||| ||||||||||| ||||||||||||||||||||||| || ||||||||||    
T  30195405 agttttcctcggcagttaactgcagccggtttcataa---ttcaacagttaactgccgaagggcatttgagtaatttactcgtgtggcatagccaaacca 30195501  T
Q  273 aatgtgggaacaacaattctc 293  Q
    |||||||||||||||||||||    
T  30195502 aatgtgggaacaacaattctc 30195522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 173 - 297
Target Start/End: Complemental strand, 4883288 - 4883164
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  ||||  ||   |||| ||||| |||| ||||  || ||  ||||||||||||||||||||||||||||||||||||    
T  4883288 agttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgttgaggggtatttgagtaatttactcgtgtgacacagccaaacca 4883189  T
Q  273 aatgtgggaacaacaattctcttat 297  Q
    |||||||||||||||||||||||||    
T  4883188 aatgtgggaacaacaattctcttat 4883164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 586623 - 586745
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  ||||  ||   |||| ||||| |||| |||||||||||  |||||||||||||||||||||| |||||||||||||    
T  586623 agttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaagggtatttgagtaatttactcgtgtggcacagccaaacca 586722  T
Q  273 aatgtgggaacaacaattctctt 295  Q
    || ||||||||| ||||||||||    
T  586723 aaagtgggaacagcaattctctt 586745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 19914521 - 19914401
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  ||||  ||   |||| ||||| |||| |||||||| || ||||||||||||||||||||||| ||||||||||| |    
T  19914521 agttttcctcggcagttaactgcagccgtatttctaaaacttcggaagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaacaa 19914422  T
Q  273 aatgtgggaacaacaattctc 293  Q
     ||||||||||||||||||||    
T  19914421 catgtgggaacaacaattctc 19914401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 214 - 293
Target Start/End: Complemental strand, 47652741 - 47652662
Alignment:
Q  214 tcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  47652741 tcggcagttaactgccgagggacatttgagtaatttactcgtgtgacacagccaaaccaaacgtgggaacagcaattctc 47652662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 174 - 282
Target Start/End: Complemental strand, 19161946 - 19161838
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaa 273  Q
    |||||||||||||||||||||  ||||| ||   |||| ||||| |||| ||||||||| | |||||||||||||||||| |||| ||||||||||||||    
T  19161946 gttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaaaggcatttgagtaatttactcttgtggcacagccaaaccaa 19161847  T
Q  274 atgtgggaa 282  Q
    |||||||||    
T  19161846 atgtgggaa 19161838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 177 - 293
Target Start/End: Complemental strand, 2365286 - 2365169
Alignment:
Q  177 ttcctcggcagttaactggcgccggttt-cacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaat 275  Q
    |||||||| ||||| ||| ||||||||| |  |||| ||||| |||| ||||||||||| |||||  || ||||||||||||| |||||||||||||| |    
T  2365286 ttcctcggtagttagctgccgccggtttactaaaaacttcggcagttaactgccgaagggcatttaggtcatttactcgtgtggcacagccaaaccaatt 2365187  T
Q  276 gtgggaacaacaattctc 293  Q
    ||||||||||||||||||    
T  2365186 gtgggaacaacaattctc 2365169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 8548688 - 8548808
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||||  ||||  ||||||||   ||||||||||| |||||  ||| |||||||||||| ||||||||||| |    
T  8548688 gttttcctcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccaaacaa 8548787  T
Q  273 aatgtgggaacaacaattctc 293  Q
     ||||||||||| ||||||||    
T  8548788 catgtgggaacagcaattctc 8548808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 214 - 293
Target Start/End: Complemental strand, 43011841 - 43011762
Alignment:
Q  214 tcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||| |||| |||||||| ||  |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  43011841 tcggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctc 43011762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 218 - 293
Target Start/End: Original strand, 43012708 - 43012783
Alignment:
Q  218 tagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    ||||||||||||||| | ||||||||||||||||||||||| || |||||||||||||||||||| | ||||||||    
T  43012708 tagtttactgccgaaaggcatttgagtaatttactcgtgtggcatagccaaaccaaatgtgggaagagcaattctc 43012783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 585706 - 585589
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  |||||||||| ||   ||||| |||| | ||||||||| |||||| |||| |||||| |||| || |||||||| |    
T  585706 agttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaattgccgaagggcatttgggtaaattactcctgtggcatagccaaacta 585610  T
Q  273 aatgtgggaacaacaattctc 293  Q
    |||||||||||| ||||||||    
T  585609 aatgtgggaacagcaattctc 585589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 38633207 - 38633292
Alignment:
Q  208 aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||| ||||| ||||||||  |||| | ||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||    
T  38633207 aaaacttcggcagtttactatcgaaaggcatttgagtaatttactcgtgtggcacagccaaactatatgtgggaacaacaattctc 38633292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 162 - 293
Target Start/End: Original strand, 3732360 - 3732492
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaactggcgccggttt-cacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgac 260  Q
    ||||||||||||||||||||||| ||||  ||| ||||||||  | ||||| ||||| |||| ||||||||| | |||||  ||| |||||||||||| |    
T  3732360 tggttatgttcagttttcctcggtagtttgctgccgccggttcactcaaaacttcggcagttaactgccgaatggcattttggtattttactcgtgtggc 3732459  T
Q  261 acagccaaaccaaatgtgggaacaacaattctc 293  Q
    ||||||| || | ||||||||||| ||||||||    
T  3732460 acagccatactatatgtgggaacagcaattctc 3732492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 62 - 193
Target Start/End: Original strand, 29622304 - 29622436
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagttttggaaaatggggaactct-gttctgtgat 160  Q
    ||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||     |||| | |||||||    ||| |||||| | |    
T  29622304 ttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgagaattttgaaggttttttggaaatgggaggttctggttctgcgtt 29622403  T
Q  161 ttggttatgttcagttttcctcggcagttaact 193  Q
     ||||||||||||| ||||||||||||||||||    
T  29622404 ctggttatgttcagatttcctcggcagttaact 29622436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 295
Target Start/End: Complemental strand, 3728789 - 3728667
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| |||||||| |  ||||  ||||||||   ||||||||||  |||||  ||| |||||||||||| ||||||||||| |    
T  3728789 gttttcctcggcagttaactgccgccggttgcctaaaaacttcggtagcaaactgccgaagagcattttcgtattttactcgtgtggcacagccaaacaa 3728690  T
Q  273 aatgtgggaacaacaattctctt 295  Q
     ||||||||||| ||||||||||    
T  3728689 gatgtgggaacagcaattctctt 3728667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 15051367 - 15051487
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat--ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacc 271  Q
    ||||||||||||||||||||| ||||||||| || ||||  ||||||||   ||||||||||| |||||  ||| ||||||||||||||||| ||||||     
T  15051367 gttttcctcggcagttaactgccgccggttt-actaaatacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtgacacaaccaaaca 15051465  T
Q  272 aaatgtgggaacaacaattctc 293  Q
    | ||||||||| | ||||||||    
T  15051466 acatgtgggaagagcaattctc 15051487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 19924950 - 19924888
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    ||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||    
T  19924950 ttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgagaattttg 19924888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 289
Target Start/End: Original strand, 13761062 - 13761178
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  |||||||    ||||||  || |||| |||||||| || ||||||||||||||||||||||  | || ||||||||    
T  13761062 agttttcctcggcagttaactgcagccggttctttaaaattgaggcagttaactgccgaggggcatttgagtaatttactcgtgtttctcatccaaacca 13761161  T
Q  273 aatgtgggaacaacaat 289  Q
    ||||||  |||||||||    
T  13761162 aatgtgtcaacaacaat 13761178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 257
Target Start/End: Original strand, 19915338 - 19915417
Alignment:
Q  175 ttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgt 257  Q
    ||||||||||||||||||||  |||||||||| ||   ||||| |||| ||||||||||| ||||||||||||||||||||||    
T  19915338 ttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgaagggcatttgagtaatttactcgtgt 19915417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 22397870 - 22397754
Alignment:
Q  178 tcctcggcagttaactggcgccggttt-cacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatg 276  Q
    ||||||||||||||||| ||||||||| | ||||| ||||| |||| |||||||||||  ||||  ||| |||||||||||| |||||||  || | | |    
T  22397870 tcctcggcagttaactgccgccggtttactcaaaacttcggcagttaactgccgaagggtattttggtattttactcgtgtggcacagccttactatacg 22397771  T
Q  277 tgggaacaacaattctc 293  Q
    |||||||||||||||||    
T  22397770 tgggaacaacaattctc 22397754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 26879314 - 26879434
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| |||||||| |  ||||  ||||||||   ||||||||||| |||||  ||| |||||| ||||| |||||||| || |    
T  26879314 gttttcctcggcagttaactgccgccggttgcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactggtgtggcacagccatacta 26879413  T
Q  273 aatgtgggaacaacaattctc 293  Q
     ||||||||||||||||||||    
T  26879414 tatgtgggaacaacaattctc 26879434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 61 - 124
Target Start/End: Complemental strand, 22524321 - 22524258
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    |||||||||||||||||||||||||   |||||||||||||| |||||||| ||||||||||||    
T  22524321 gttgatttgcttgcaattcgtgaaaatcgatttggtgaagattggagagaatttgagaattttg 22524258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 214 - 293
Target Start/End: Complemental strand, 37991626 - 37991547
Alignment:
Q  214 tcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||| |||| |||| ||| |||||||||||||||||| |||||||  ||||||||||||||| ||| |||||||||||||    
T  37991626 tcggcagttaactgtcgagggacatttgagtaatttattcgtgtgggacagccaaaccaaatatggaaacaacaattctc 37991547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 29622443 - 29622549
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttc-acaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||| ||||||| |||||||||| | |||| ||||||||   ||||||||||| |||||  ||| |||||||||||| ||||||||||| |    
T  29622443 gttttcctcggcaattaactgccgccggtttccaaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccaaacaa 29622542  T
Q  273 aatgtgg 279  Q
     ||||||    
T  29622543 catgtgg 29622549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 30890255 - 30890193
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    ||||||||||||||||||||||||   |||||||||||||| |||||||| ||||||||||||    
T  30890255 ttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaatttgagaattttg 30890193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 31783596 - 31783658
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg 124  Q
    ||||||||||||||||||||||||   |||||||||||||| | |||||||||||||||||||    
T  31783596 ttgatttgcttgcaattcgtgaaaatggatttggtgaagattgaagagaaattgagaattttg 31783658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 293
Target Start/End: Original strand, 15696749 - 15696869
Alignment:
Q  170 ttcagttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaa 269  Q
    ||||||||||||||| |||||||||  ||||||| || ||   ||||| |||| |||| |||||| ||||| ||||| ||||| |||||||||||||||     
T  15696749 ttcagttttcctcggtagttaactgcagccggttccataa---ttcggcagttaactgtcgaagggcattttagtaaattactagtgtgacacagccaat 15696845  T
Q  270 ccaaatgtgggaacaacaattctc 293  Q
     || |||||  |||||||||||||    
T  15696846 gcatatgtgtcaacaacaattctc 15696869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 178 - 295
Target Start/End: Complemental strand, 21141075 - 21140958
Alignment:
Q  178 tcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgt 277  Q
    |||||||  |||||||| || ||||||   |||| ||||| |||| | || ||||||||||||  |||| ||||||||||| | ||||||||||||||||    
T  21141075 tcctcggtcgttaactgccgtcggttttctaaaacttcggcagttaattgtcgaaggacatttaggtaaattactcgtgtgtctcagccaaaccaaatgt 21140976  T
Q  278 gggaacaacaattctctt 295  Q
    |  |||||||||||||||    
T  21140975 gtcaacaacaattctctt 21140958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 175 - 295
Target Start/End: Complemental strand, 50036901 - 50036780
Alignment:
Q  175 ttttcctcggcagttaactggcgccggtttc-acaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaa 273  Q
    ||||| |||| |||||||||  ||||| ||| | |||| ||||| |||| |||||||| |||||||||||||||||||| ||||  | |||||||| |||    
T  50036901 ttttcttcggtagttaactgcagccgggttctagaaaacttcggcagttaactgccgagggacatttgagtaatttacttgtgtttctcagccaaatcaa 50036802  T
Q  274 atgtgggaacaacaattctctt 295  Q
    |||||  |||| ||||||||||    
T  50036801 atgtgtcaacagcaattctctt 50036780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 179 - 295
Target Start/End: Complemental strand, 4208445 - 4208329
Alignment:
Q  179 cctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtg 278  Q
    ||||||||||||||||  ||||||| |   ||| ||||| |||| |||||||||||| |||||||||| ||||||||||  | ||  |||||||||||||    
T  4208445 cctcggcagttaactgcagccggttccttcaaaattcggcagttaactgccgaaggatatttgagtaaattactcgtgtttctcaatcaaaccaaatgtg 4208346  T
Q  279 ggaacaacaattctctt 295  Q
      |||||||||| ||||    
T  4208345 tcaacaacaattttctt 4208329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 174 - 289
Target Start/End: Complemental strand, 38771683 - 38771567
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatt-tcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| ||||||||||  ||||   |||||||   |||||||||||  ||||  ||| |||||||||||| ||||||||||| |    
T  38771683 gttttcctcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaa 38771584  T
Q  273 aatgtgggaacaacaat 289  Q
     ||||||||||| ||||    
T  38771583 catgtgggaacagcaat 38771567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 165 - 293
Target Start/End: Complemental strand, 26875756 - 26875627
Alignment:
Q  165 ttatgttcagttttcctcggcagttaactggcgccggtttcac--aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacac 262  Q
    |||||| ||||||||||||||||||| ||| |||||| |||||  |||| ||||| |||| ||||||||||| |||||  ||| |||||| ||||| |||    
T  26875756 ttatgtccagttttcctcggcagttagctgccgccgg-ttcactaaaaacttcggcagttaactgccgaagggcatttttgtattttactggtgtggcac 26875658  T
Q  263 agccaaaccaaatgtgggaacaacaattctc 293  Q
    ||||| || | | ||||||| | ||||||||    
T  26875657 agccatactatacgtgggaatagcaattctc 26875627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 207 - 293
Target Start/End: Complemental strand, 19924775 - 19924689
Alignment:
Q  207 caaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    ||||| ||||| |||| ||||||||||| |||||  ||| |||||||||||| |||||||| || | ||||||||||| ||||||||    
T  19924775 caaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacagcaattctc 19924689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 173 - 259
Target Start/End: Complemental strand, 30194476 - 30194390
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtga 259  Q
    ||||||||||||||||||||||  ||||  ||   |||| ||||| |||| |||||||||||  |||||||||||||||||||||||    
T  30194476 agttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaagggtatttgagtaatttactcgtgtga 30194390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 293
Target Start/End: Complemental strand, 30890069 - 30889995
Alignment:
Q  219 agtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||| ||||||||||| |||||  ||| |||||||||||| |||||||| || | ||||||||||||||||||||    
T  30890069 agttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacaacaattctc 30889995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 289
Target Start/End: Original strand, 20353953 - 20354070
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatt-tcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacc 271  Q
    |||||||||||||||||||||| ||||||||||  ||||   ||| |||   |||||||||||  ||||  ||| |||||||||||| |||||||||||     
T  20353953 agttttcctcggcagttaactgccgccggtttcctaaaaacctcgatagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaaca 20354052  T
Q  272 aaatgtgggaacaacaat 289  Q
    | ||||||||||| ||||    
T  20354053 acatgtgggaacagcaat 20354070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 208 - 257
Target Start/End: Original strand, 48228355 - 48228404
Alignment:
Q  208 aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgt 257  Q
    |||| ||||| |||| ||||||||||||||||||||||||||||||||||    
T  48228355 aaaacttcggcagttaactgccgaaggacatttgagtaatttactcgtgt 48228404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 289
Target Start/End: Complemental strand, 12627290 - 12627178
Alignment:
Q  177 ttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatg 276  Q
    ||||||||||||||||||   ||||||    |||||||||| | || ||| |||||||  ||||| |||| ||||||||||  | |||||||||||||||    
T  12627290 ttcctcggcagttaactgcacccggttctttaaaatttcggcaattaactaccgaagggtatttgggtaaattactcgtgtttctcagccaaaccaaatg 12627191  T
Q  277 tgggaacaacaat 289  Q
    || ||||||||||    
T  12627190 tgtgaacaacaat 12627178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 18609913 - 18610033
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||||||| ||||||||| |||||||||   |||| ||||| |||| |||||| |||| || ||  ||||  || |||||||||||||||  | ||    
T  18609913 agttttcctcggtagttaactgccgccggtttactaaaacttcggcagttaactgccaaagggcaattaggtaaaatattcgtgtgacacagccttatca 18610012  T
Q  273 aatgtgggaacaacaattctc 293  Q
    ||||||  |||||||||||||    
T  18610013 aatgtgtaaacaacaattctc 18610033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 293
Target Start/End: Original strand, 22528656 - 22528736
Alignment:
Q  213 ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    ||||| |||| |||||||||||  ||||  |||| |||||||||||  |||||||| ||||||||||||||| ||||||||    
T  22528656 ttcggcagttaactgccgaagggaatttaggtaaattactcgtgtggtacagccaatccaaatgtgggaacatcaattctc 22528736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 170 - 293
Target Start/End: Original strand, 49661748 - 49661871
Alignment:
Q  170 ttcagttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaa 269  Q
    |||||||||||||||||||||||||  ||||  ||   |||| ||||  | || | | |||| | |||||||| ||||||||||||||| |  | |||||    
T  49661748 ttcagttttcctcggcagttaactgcagccgtatttctaaaacttcgacaattaattaccgaggaacatttgaataatttactcgtgtggcctaaccaaa 49661847  T
Q  270 ccaaatgtgggaacaacaattctc 293  Q
    |||||||| |||||||||||||||    
T  49661848 ccaaatgtaggaacaacaattctc 49661871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 293
Target Start/End: Complemental strand, 13629424 - 13629338
Alignment:
Q  207 caaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    ||||| ||||| |||| ||||||||||| |||||  ||| |||||||||||| |||| ||| || | ||||||||||| ||||||||    
T  13629424 caaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacaaccatactatatgtgggaacagcaattctc 13629338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 173 - 270
Target Start/End: Original strand, 5330032 - 5330129
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaac 270  Q
    |||||||||||||| |||||||  ||| |||    ||||||||| | ||| |||||||||| | |||||||||||||||||||||  | |||||||||    
T  5330032 agttttcctcggcaattaactgcagccagttctttaaaatttcgattgttaactgccgaagaatatttgagtaatttactcgtgtttctcagccaaac 5330129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 38632506 - 38632449
Alignment:
Q  213 ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaac 270  Q
    ||||| |||| ||| ||||||| |||||||||||||||||| |||| |||||||||||    
T  38632506 ttcggcagttaactaccgaagggcatttgagtaatttactcctgtggcacagccaaac 38632449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 44621182 - 44621259
Alignment:
Q  219 agtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctctta 296  Q
    |||| ||||||||||| |||||  ||| |||||||||||| |||| ||| || | | |||||||||||||||||||||    
T  44621182 agttaactgccgaagggcattttcgtattttactcgtgtggcacaaccatactatacgtgggaacaacaattctctta 44621259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 2365327 - 2365295
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaactg 194  Q
    |||||||||||||||||||||||||||||||||    
T  2365327 tggttatgttcagttttcctcggcagttaactg 2365295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 289
Target Start/End: Complemental strand, 5329174 - 5329062
Alignment:
Q  177 ttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatg 276  Q
    ||||||||||||||||||   ||||||    |||||||||| |||| ||||| ||| |  ||||| |||| ||| ||||||  | |||||||||||||||    
T  5329174 ttcctcggcagttaactgcaaccggttctttaaaatttcggcagttaactgctgaatggtatttgggtaaattattcgtgtttctcagccaaaccaaatg 5329075  T
Q  277 tgggaacaacaat 289  Q
    || ||||||||||    
T  5329074 tgtgaacaacaat 5329062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 293
Target Start/End: Complemental strand, 8473797 - 8473717
Alignment:
Q  213 ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||||||||| ||||||||||| |||||  ||| |||||||||||| |||| ||| || | |||||||||||  |||||||    
T  8473797 ttcggtagttaactgccgaagggcattttcgtattttactcgtgtggcacatccatactatatgtgggaacagtaattctc 8473717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 8473878 - 8473846
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaactg 194  Q
    |||||||||||||||||||||||||||||||||    
T  8473878 tggttatgttcagttttcctcggcagttaactg 8473846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 138
Target Start/End: Complemental strand, 47502509 - 47502431
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaagattt-ggtgaagatcggagagaaattgagaatttt-gtgaagttttggaaa 138  Q
    ||||||||| ||||||||||| ||| | ||||| ||||||||| |||||||||||| ||||||| | |||||||||||||    
T  47502509 gttgatttgtttgcaattcgtaaaa-atgattttggtgaagattggagagaaattgtgaattttggagaagttttggaaa 47502431  T

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Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 49429155 - 49429250
Alignment:
Q  175 ttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaac 270  Q
    ||||||||||||  ||||||  ||||| ||   |||| ||||| |||| ||||||||||  ||||||||||||||||||||||  |||| ||||||    
T  49429155 ttttcctcggcaactaactgcagccggatttctaaaacttcggcagttaactgccgaagagcatttgagtaatttactcgtgtttcacaaccaaac 49429250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 119
Target Start/End: Complemental strand, 11183372 - 11183314
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaa 119  Q
    |||||||||||||||||||||||||   | |||||||||||| ||| |||| |||||||    
T  11183372 gttgatttgcttgcaattcgtgaaaattgctttggtgaagattggaaagaatttgagaa 11183314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 19928938 - 19928984
Alignment:
Q  247 tttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||||||||||| ||||||||||| | ||||||||||| ||||||||    
T  19928938 tttactcgtgtggcacagccaaacaacatgtgggaacagcaattctc 19928984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 45825080 - 45825023
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagattt-ggtgaagatcggagagaaattgagaa 119  Q
    |||||||||| ||||||||||||| | ||||| ||||||||| ||||||||||||||||    
T  45825080 ttgatttgctggcaattcgtgaaa-atgattttggtgaagattggagagaaattgagaa 45825023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 221 - 255
Target Start/End: Complemental strand, 51461152 - 51461118
Alignment:
Q  221 tttactgccgaaggacatttgagtaatttactcgt 255  Q
    ||||||||||||| |||||||||||||||||||||    
T  51461152 tttactgccgaagaacatttgagtaatttactcgt 51461118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 289
Target Start/End: Complemental strand, 20556901 - 20556836
Alignment:
Q  224 actgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaat 289  Q
    |||||||||||  ||||  ||| |||||||||||| ||||||||||| | ||||||||||| ||||    
T  20556901 actgccgaagggtattttggtattttactcgtgtggcacagccaaacaacatgtgggaacagcaat 20556836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 296
Target Start/End: Complemental strand, 27649308 - 27649188
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||||||| |||||||||  ||||||| || ||   ||| | || | |||||||| || |||||  |||| ||||| |||||||||||||||  ||    
T  27649308 agttttcctcggtagttaactgcagccggttccataa---ttcagcagctaactgccgaggggcatttcggtaaattactagtgtgacacagccaatgca 27649212  T
Q  273 aatgtgggaacaacaattctctta 296  Q
     |||||  ||||||||||||||||    
T  27649211 tatgtgtcaacaacaattctctta 27649188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 257
Target Start/End: Complemental strand, 42290316 - 42290267
Alignment:
Q  208 aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgt 257  Q
    |||||||||| |||| |||||| | || ||||||||||||||||||||||    
T  42290316 aaaatttcggcagttaactgccaaggggcatttgagtaatttactcgtgt 42290267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 266
Target Start/End: Original strand, 45977716 - 45977809
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagcc 266  Q
    ||||||||||||||||| |||  |||||||||   |||| ||||| |||| ||||||||| |||||||  ||||  ||||||| || |||||||    
T  45977716 agttttcctcggcagtttactttcgccggtttactaaaacttcggcagttaactgccgaatgacattttcgtaaagtactcgtatggcacagcc 45977809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 51461868 - 51461952
Alignment:
Q  170 ttcagttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgt 257  Q
    ||||||||||||||| |||||||||  ||||||| |||||   ||||| |||| ||||||||  | |||||| |||| ||||||||||    
T  51461868 ttcagttttcctcggtagttaactgcagccggttccacaa---ttcggcagttaactgccgagtggcatttgggtaaattactcgtgt 51461952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 173 - 299
Target Start/End: Complemental strand, 9618773 - 9618650
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||||||| |||||||||  ||||||| || ||   ||||| |||| |||||| | | ||||||  |||| |||||||||||||||||||  |       
T  9618773 agttttcctcggtagttaactgcagccggttccataa---ttcggcagttaactgccaaggaacatttcggtaaattactcgtgtgacacagccttatgc 9618677  T
Q  273 aatgtgggaacaacaattctcttatat 299  Q
    ||||||  ||||||||||||| |||||    
T  9618676 aatgtgtcaacaacaattctcatatat 9618650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 233
Target Start/End: Original strand, 13636141 - 13636201
Alignment:
Q  174 gttttcctcggcagttaactggcgccgg-tttcacaaaatttcggtagtttactgccgaag 233  Q
    |||||||||||||||||||||  ||||| |||  ||||||||||| |||| ||||||||||    
T  13636141 gttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccgaag 13636201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 21700864 - 21700983
Alignment:
Q  173 agttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||||  |||||||||| ||   ||||| |||| |||||  | || |||||| |||| ||||| ||||  | ||||||||       
T  21700864 agttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgcttaggggcatttgggtaaattactagtgtttctcagccaaaggt 21700960  T
Q  273 aatgtgggaacaacaattctctt 295  Q
    ||||||  |||||||||||||||    
T  21700961 aatgtgtcaacaacaattctctt 21700983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 23275987 - 23276050
Alignment:
Q  61 gttgatttgcttgcaattcgtgaaagaaga-tttggtgaagatcggagagaaattgagaattttg 124  Q
    ||||||||||||||||||||||||| | || |||||||||||| ||| |||| ||||||| ||||    
T  23275987 gttgatttgcttgcaattcgtgaaa-atgactttggtgaagattggaaagaatttgagaagtttg 23276050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 295
Target Start/End: Original strand, 29356736 - 29356812
Alignment:
Q  219 agtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctctt 295  Q
    |||| |||||||| ||  |||||  ||||||||| ||||  | ||||||||| | ||||||||||||||||||||||    
T  29356736 agttaactgccgaggggtatttggataatttacttgtgtttctcagccaaacaacatgtgggaacaacaattctctt 29356812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 46319731 - 46319683
Alignment:
Q  246 atttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctct 294  Q
    ||||||||||||| |||||||| |   ||||||||||||||||||||||    
T  46319731 atttactcgtgtggcacagccatatgtaatgtgggaacaacaattctct 46319683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 174 - 293
Target Start/End: Complemental strand, 10706 - 10587
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaa 273  Q
    |||| |||||||||||||||| |||||||||   |||| ||||| |||| | ||||||||| ||||| |||||||||||||||||||||| |||||||||    
T  10706 gtttccctcggcagttaactgccgccggtttactaaaacttcggcagttaattgccgaagggcatttaagtaatttactcgtgtgacacaaccaaaccaa 10607  T
Q  274 atgtgggaacaacaattctc 293  Q
    ||||||||||||||||||||    
T  10606 atgtgggaacaacaattctc 10587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 11507 - 11592
Alignment:
Q  208 aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||| ||||| |||| ||||||||||| |||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11507 aaaacttcggcagttaactgccgaagggcatttaggtaatttactcgtgtggcacagccaaaccaaatgtgggaacaacaattctc 11592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 11434 - 11466
Alignment:
Q  162 tggttatgttcagttttcctcggcagttaactg 194  Q
    |||||||||||||||||||||| ||||||||||    
T  11434 tggttatgttcagttttcctcgacagttaactg 11466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 54; Significance: 9e-22; HSPs: 2)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 174 - 294
Target Start/End: Complemental strand, 7472 - 7351
Alignment:
Q  174 gttttcctcggcagttaactggcgccggttt-cacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||| ||| ||||| |||||| || |  |||| ||||| |||||||||||||||| |||||  ||||  |||||||||| |||||||||||||    
T  7472 gttttcctcggtagtcaactgccgccgggttactaaaaacttcggcagtttactgccgaagggcattttcgtaaagtactcgtgtgtcacagccaaacca 7373  T
Q  273 aatgtgggaacaacaattctct 294  Q
     |||||||||||||||||||||    
T  7372 gatgtgggaacaacaattctct 7351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 62 - 193
Target Start/End: Complemental strand, 7611 - 7479
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagt-tttggaaaatggggaactct-gttctgtga 159  Q
    ||||||||||||||||||||||||   |||||||||||||| ||||||||||||||||||| |  |||| ||| | |||||||    ||| |||||| ||    
T  7611 ttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgagaatttag-aaagtgttttggaaatgggaggttctggttctgcga 7513  T
Q  160 tttggttatgttcagttttcctcggcagttaact 193  Q
    |||| ||| |||||| ||||||||||||||||||    
T  7512 tttgtttaagttcagatttcctcggcagttaact 7479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 174 - 293
Target Start/End: Complemental strand, 50101 - 49981
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    ||||||||||||||||||||| |||||||| |  ||||  ||||| | || |||| ||| |  ||||||||||||||||||||||| |||||||||||||    
T  50101 gttttcctcggcagttaactgccgccggttccctaaaaacttcggcatttaactgtcgaggagcatttgagtaatttactcgtgtggcacagccaaacca 50002  T
Q  273 aatgtgggaacaacaattctc 293  Q
    ||||||  |||||||||||||    
T  50001 aatgtgtaaacaacaattctc 49981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 208 - 294
Target Start/End: Original strand, 69274 - 69360
Alignment:
Q  208 aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctct 294  Q
    |||| ||||| |||| |||||||| ||  |||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||    
T  69274 aaaacttcggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaacatcaattctct 69360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 242 - 293
Target Start/End: Complemental strand, 68400 - 68349
Alignment:
Q  242 agtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||||||||||| |||| || |||||||||||||||||||||| ||||||||    
T  68400 agtaatttactcatgtggcatagccaaaccaaatgtgggaacagcaattctc 68349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 236 - 294
Target Start/End: Original strand, 239 - 297
Alignment:
Q  236 catttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctct 294  Q
    |||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  239 catttgcgtaatttacttgtgtggcacagccaaaccaaatgtgggaacaacaattctct 297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 174 - 290
Target Start/End: Original strand, 741 - 858
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaat-ttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaacca 272  Q
    |||||||| |||||||||||| ||||||||||  ||||  ||||| |||||||| ||||||| |||||  ||| ||||||| |||| |||||||| || |    
T  741 gttttcctgggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtattttactcatgtggcacagccatacta 840  T
Q  273 aatgtgggaacaacaatt 290  Q
     |||||||||||||||||    
T  841 tatgtgggaacaacaatt 858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 62 - 193
Target Start/End: Original strand, 602 - 734
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttg-tgaagttttggaaaatggggaactct-gttctgtga 159  Q
    ||||||||||||||||||||||||   ||||||| ||||||  |||||||||||  || ||||   ||||||||| ||||| | |  ||| |||||| |     
T  602 ttgatttgcttgcaattcgtgaaaatggatttggagaagatttgagagaaattgttaaatttgaaaaagttttgg-aaatgagaagttctggttctgcgt 700  T
Q  160 tttggttatgttcagttttcctcggcagttaact 193  Q
    | ||||||||| ||||||||||||||||||||||    
T  701 tatggttatgtccagttttcctcggcagttaact 734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 18175 - 18251
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagttttggaaa 138  Q
    ||||||||||||||||||||||||   |||||||||||||| |||||||||||| ||||||||  || |||||||||    
T  18175 ttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgtgaattttgaaaaattttggaaa 18251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 54669 - 54593
Alignment:
Q  62 ttgatttgcttgcaattcgtgaaagaagatttggtgaagatcggagagaaattgagaattttgtgaagttttggaaa 138  Q
    ||||||||||||||||||||||||   |||||||||||||| |||||||||||| ||||||||  || |||||||||    
T  54669 ttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgtgaattttgaaaaattttggaaa 54593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 442 - 561
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaa 273  Q
    ||||||||||||||||||||| ||||||||||  ||||  | |||||   ||||||||||| |||||  ||| |||||| ||||| |||| ||| || |     
T  442 gttttcctcggcagttaactgccgccggtttcttaaaaacttggtagcaaactgccgaagggcattttcgtattttactggtgtggcacaaccatactat 541  T
Q  274 atgtgggaacaacaattctc 293  Q
    ||||||||||||||||||||    
T  542 atgtgggaacaacaattctc 561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 181 - 293
Target Start/End: Complemental strand, 84593 - 84481
Alignment:
Q  181 tcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtggg 280  Q
    |||||||||||||| |||||||| |  ||||  |||||||   |||||||| || |||||  ||| |||||||||||| ||||||||||| | |||||||    
T  84593 tcggcagttaactgccgccggttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgtggcacagccaaactatatgtggg 84494  T
Q  281 aacaacaattctc 293  Q
    |||| ||||||||    
T  84493 aacagcaattctc 84481  T

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Target: scaffold1606 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1606
Description:

Target: scaffold1606; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 293
Target Start/End: Original strand, 31 - 100
Alignment:
Q  224 actgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 293  Q
    |||||||| || |||||  ||| |||||||||||| ||||||||||| | ||||||||||||||||||||    
T  31 actgccgaggggcattttggtattttactcgtgtggcacagccaaactatatgtgggaacaacaattctc 100  T

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Target: scaffold0092 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 54619 - 54536
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgt 257  Q
    |||||||||||||||||||||  |||||||   |||||||| |  |||| | |||||| |||||||||||||||||||| ||||    
T  54619 gttttcctcggcagttaactgcagccggttcttcaaaattttgacagttaattgccgagggacatttgagtaatttacttgtgt 54536  T

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Target: scaffold0238 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 296
Target Start/End: Original strand, 18897 - 19026
Alignment:
Q  166 tatgttcagttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagc 265  Q
    |||||||||||  | |||||||||||||| ||  | ||||||||| ||| || |||| |||||| |||| |||||  |||| ||||| ||||| | ||||    
T  18897 tatgttcagttcgcatcggcagttaactgccgaggttttcacaaacttt-ggaagttaactgccaaagggcatttaggtaaattactagtgtgtctcagc 18995  T
Q  266 caaaccaaatgtgggaacaacaattctctta 296  Q
    | |||||||||||  |||| |||||||||||    
T  18996 ctaaccaaatgtgtcaacatcaattctctta 19026  T

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Target: scaffold0504 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 12436 - 12347
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacaca 263  Q
    |||||||||||||||||| || |||||||||   |||||||||  |||| ||||||||||| |||||  ||||  |||||||||| ||||    
T  12436 gttttcctcggcagttaattgccgccggtttactaaaatttcgacagttaactgccgaagggcatttttgtaaagtactcgtgtggcaca 12347  T

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Target: scaffold0065 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 209 - 289
Target Start/End: Complemental strand, 65337 - 65256
Alignment:
Q  209 aaatttcggtagtttactgccgaaggacattt-gagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaat 289  Q
    ||||||||| |||| ||||||||| ||||||| ||||||||||||| |||  | ||||||||| |||||||  |||||||||    
T  65337 aaatttcggcagttaactgccgaatgacattttgagtaatttactcatgtttctcagccaaacgaaatgtgtaaacaacaat 65256  T

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Target: scaffold0176 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 214 - 290
Target Start/End: Original strand, 653 - 729
Alignment:
Q  214 tcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaatt 290  Q
    |||| |||| |||||||| || ||||||||||||||||||||||  | |||||||||  ||||||  ||||||||||    
T  653 tcggcagttaactgccgaggggcatttgagtaatttactcgtgtttctcagccaaactcaatgtgtcaacaacaatt 729  T

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Target: scaffold0268 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 256 - 290
Target Start/End: Original strand, 15490 - 15524
Alignment:
Q  256 gtgacacagccaaaccaaatgtgggaacaacaatt 290  Q
    ||||||||| |||||||||||||||||||||||||    
T  15490 gtgacacaggcaaaccaaatgtgggaacaacaatt 15524  T

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Target: scaffold0019 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 257
Target Start/End: Complemental strand, 127521 - 127472
Alignment:
Q  208 aaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgt 257  Q
    |||||||||| |||| ||| |||| ||| |||||||||||||||||||||    
T  127521 aaaatttcggcagttaactaccgatggatatttgagtaatttactcgtgt 127472  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 236279 - 236371
Alignment:
Q  174 gttttcctcggcagttaactggcgccggtttcacaaaatttcggtagtttactgccgaaggacatttgagtaatttactcgtgtgacacagcc 266  Q
    |||||||||||||||| |||| |||| ||||   |||| ||||| |||| || |||||||| |||||  ||||  |||||||||| |||||||    
T  236279 gttttcctcggcagtttactgccgccagtttactaaaacttcggcagttaaccgccgaagggcattttcgtaaagtactcgtgtggcacagcc 236371  T

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