View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16571_high_18 (Length: 272)
Name: NF16571_high_18
Description: NF16571
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16571_high_18 |
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Alignment Details
Target: chr1 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 77 - 253
Target Start/End: Original strand, 32959074 - 32959250
Alignment:
| Q |
77 |
ctcaatttccacaaacctgtttgccaagaatcaaaagcccaggtttctcaatctcaacaagcttcttcaaaatcttggcaacaaaaagcggatacatgga |
176 |
Q |
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| T |
32959074 |
ctcaatttccacaaacctgtttgccaagaatcaaaagcccaggtttctcaatctcaacaagcttcttcaaaatcttggcaacaaaaagcggatacatgga |
32959173 |
T |
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| Q |
177 |
atcattagcctccacatgaatccctctatcagctcccatagcaagaccagttctaagagtatctacacactgagaag |
253 |
Q |
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| T |
32959174 |
atcattagcctccacatgaatccctctatcagctcccatagcaagaccagttctaagagtatctacacactgagaag |
32959250 |
T |
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